NO28G01160, NO28G01160 (gene) Nannochloropsis oceanica

Overview
NameNO28G01160
Unique NameNO28G01160
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4391
Alignment locationchr28:357060..361450 +

Link to JBrowse

Properties
Property NameValue
DescriptionD-3-phosphoglycerate dehydrogenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr28genomechr28:357060..361450 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0051287NAD binding
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR029009ASB_dom
IPR006140D-isomer_DH_NAD-bd
IPR006139D-isomer_2_OHA_DH_cat_dom
IPR002912ACT_dom
Homology
BLAST of NO28G01160 vs. NCBI_GenBank
Match: EWM20885.1 (d-3-phosphoglycerate dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 695.3 bits (1793), Expect = 1.600e-196
Identity = 344/389 (88.43%), Postives = 368/389 (94.60%), Query Frame = 0
Query:  121 MVMNTPGGNTVSTAQLAFSLLAVSARSLARADMSMKEGKWERSKFMGTELAGKTLAVVGCGRIGQQVARWGQAFDMTVVGFDPVLPAASFKELGIKKCDLDKIWPQADFITLHTPLTPDTKNLVNAESLAQMKKGVHIVNCARGGIVNEMDLLASLEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIAIQMCDTLESKDFVGVCNVGYMSIAQNQAIRPFADLAQQLGRVASQFALGKITKLTISTWGQTDISITSADARALLKAQALVGLLSTKDTQGVLPGIVNAPFLAEEAGVVGEALKETPALASIASPYRNLITVEAHVEGGGVTSVTGSVFGNEPCLVSLDNYKNFPALNLHDGSVLKFRNR 510
            MVMNTPGGNTVSTAQLAFSLLAVSARSLARADMSMK GKWERSK MGTELAGKTLAVVGCGRIGQQVA+WGQAFDM VVGFDPVLPAA+FKELGI+KCDL+K+WPQADFITLHTPLTPDTKNL+N ESL QMKKGVHI+NCARGGIV+EMDLL +LEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIA+QMCDTLESKDFVGVCNVGYMSIAQN AIRP+ADLAQQLGRVA+QFA+G + K+T+++WGQTDISITS DARALLKAQALVG LST+DT G LPGIVNAPFLAEE GV  EAL E PALAS ASPYR+LITV AHVEGGG TSVTGSVFG+EPCLVSLD+YKNFPALNLH+GSVLKFRN+
Sbjct:    1 MVMNTPGGNTVSTAQLAFSLLAVSARSLARADMSMKAGKWERSKLMGTELAGKTLAVVGCGRIGQQVAKWGQAFDMKVVGFDPVLPAAAFKELGIQKCDLEKVWPQADFITLHTPLTPDTKNLINRESLQQMKKGVHIINCARGGIVHEMDLLEALEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIAVQMCDTLESKDFVGVCNVGYMSIAQNHAIRPYADLAQQLGRVATQFAMGTVWKITLASWGQTDISITSPDARALLKAQALVGFLSTQDTHGTLPGIVNAPFLAEELGVETEALTEAPALASAASPYRSLITVVAHVEGGGATSVTGSVFGHEPCLVSLDHYKNFPALNLHEGSVLKFRNK 389          
BLAST of NO28G01160 vs. NCBI_GenBank
Match: CBJ29093.1 (D-3-phosphoglycerate dehydrogenase [Ectocarpus siliculosus])

HSP 1 Score: 589.0 bits (1517), Expect = 1.600e-164
Identity = 297/572 (51.92%), Postives = 399/572 (69.76%), Query Frame = 0
Query:    3 MRRALQRGSSVGGHYLQQTQRAHLHASRPTLAKILCADSIDPVCIQIFKERGHEVDYKVGLSKEELLNIIPQYHGLVVRSATKVTGDVIAAADKLVVIGRAGVGVDNIDLPAATKKGVMVMNTPGGNTVSTAQLAFSLLAVSARSLARADMSMKEGKWERSKFMGTELAGKTLAVVGCGRIGQQVARWGQAFDMTVVGFDPVLPAASFKELGIKKCDLDKIWPQADFITLHTPLTPDTKNLVNAESLAQMKKGVHIVNCARGGIVNEMDLLASLEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIAIQMCDTLESKDFVGVCNVGYMSIAQNQAIRPFADLAQQLGRVASQFALGKITKLTISTWGQTDISITSADARALLKAQALVGLLSTKDTQGVLPGIVNAPFLAEEAGVVGEALKETPALASIASPYRNLITVEAHVEGGGVTSVTGSVFGNEPCLVSLDNYKNFPALNLHDGSVLKFRNRDEPGAVSGVLEVLEEHKVNIANLTLGRQDADLALCLMSVDGEVPAAAVEQLKGLAQLNDVRTAKL 575
            ++R  +  S +    L    R   HA+ P  A+ILC D+IDPVC+ IF+ERGH  D K  LS E+L  II  Y G+V+RSATK T D++A A  + VIGRAGVG+DNID+  AT+KGV+VMNTPGGNTVSTAQLA SLL  +AR +  AD+SMK GKWER KFMG EL GKT+A+VGCGRIGQ VA+W Q FDM V+GFDP LP  +  ELGI+  DL  +W +ADFITLHTPLTPDT++LVN ES+AQMK GV IVNCARGGI+NE  LL +L +G V  AALDVY  EPP ES+++LL HP + CTPHLGASTEEAQVNVA+D+A+QMCDTLE K + GV NV YM++A   A++P+  LA+++G++ +Q +  K+ K+ + T+G    +I +  AR ++ A  + GLL         P ++N+PFL++E G +  ++ +      + SPY N+ITV+  +E G   S++GSVFG EP LV +DN+++FPA    +G+++ FRN D  G V  VL+ LE  +VN+  L +GRQ+ +LAL +M +DGE+    + +L  L+ + +V  A L
Sbjct:   52 LQRERRESSPMSLSKLGLAGRRAFHAAAPRAARILCLDNIDPVCVDIFQERGHHADVKNKLSVEQLHGIIGNYDGMVIRSATKATPDLLAKATNMKVIGRAGVGIDNIDVAEATRKGVLVMNTPGGNTVSTAQLAISLLCSAARRIPEADISMKAGKWERKKFMGQELKGKTIAIVGCGRIGQMVAKWAQGFDMEVIGFDPALPKDAAAELGIQLMDLPDVWAKADFITLHTPLTPDTQDLVNDESIAQMKDGVIIVNCARGGIINEDALLKALNSGKVASAALDVYSSEPPPESSRELLQHPRLVCTPHLGASTEEAQVNVARDVAVQMCDTLEGKAYTGVVNVSYMAVANEPAMQPYMILAERIGKMQAQISSSKVVKVGLRTYGGKAANIEANSARQVILATVMKGLLQYTKECKTAPSLINSPFLSKEMG-IETSIDDKIHAVLVNSPYTNVITVDITLEDGETHSISGSVFGEEPNLVQIDNHRSFPAFK-PEGTIVMFRNEDRAGVVLQVLQELEAAEVNVGRLNVGRQEGELALTIMGIDGEITPDVMSKLGALSAVREVSVANL 621          
BLAST of NO28G01160 vs. NCBI_GenBank
Match: EWM20886.1 (d-3-phosphoglycerate dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 556.2 bits (1432), Expect = 1.200e-154
Identity = 272/314 (86.62%), Postives = 295/314 (93.95%), Query Frame = 0
Query:  196 MTVVGFDPVLPAASFKELGIKKCDLDKIWPQADFITLHTPLTPDTKNLVNAESLAQMKKGVHIVNCARGGIVNEMDLLASLEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIAIQMCDTLESKDFVGVCNVGYMSIAQNQAIRPFADLAQQLGRVASQFALGKITKLTISTWGQTDISITSADARALLKAQALVGLLSTKDTQGVLPGIVNAPFLAEEAGVVGEALKETPALASIASPYRNLITVEAHVEGGGVTSVTGSVFGNEPCLVSLDNYKNFPALNLHDGSVLKFRNR 510
            M VVGFDPVLPAA+FKELGI+KCDL+K+WPQADFITLHTPLTPDTKNL+N ESL QMKKGVHI+NCARGGIV+EMDLL +LEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIA+QMCDTLESKDFVGVCNVGYMSIAQN AIRP+ADLAQQLGRVA+QFA+G + K+T+++WGQTDISITS DARALLKAQALVG LST+DT G LPGIVNAPFLAEE GV  EAL E PALAS ASPYR+LITV AHVEGGG TSVTGSVFG+EPCLVSLD+YKNFPALNLH+GSVLKFRN+
Sbjct:    1 MKVVGFDPVLPAAAFKELGIQKCDLEKVWPQADFITLHTPLTPDTKNLINRESLQQMKKGVHIINCARGGIVHEMDLLEALEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIAVQMCDTLESKDFVGVCNVGYMSIAQNHAIRPYADLAQQLGRVATQFAMGTVWKITLASWGQTDISITSPDARALLKAQALVGFLSTQDTHGTLPGIVNAPFLAEELGVETEALTEAPALASAASPYRSLITVVAHVEGGGATSVTGSVFGHEPCLVSLDHYKNFPALNLHEGSVLKFRNK 314          
BLAST of NO28G01160 vs. NCBI_GenBank
Match: EWM30503.1 (phosphoserine aminotransferase [Nannochloropsis gaditana])

HSP 1 Score: 479.9 bits (1234), Expect = 1.100e-131
Identity = 272/580 (46.90%), Postives = 385/580 (66.38%), Query Frame = 0
Query:    2 MMRRALQRGSSVGGHYLQQTQRAHLHASRPTLAKILCADSIDPVCIQIFKERGHEVDYKVGLSKEELLNIIPQYHGLVVRSATKVTGDVIAAADKLVVIGRAGVGVDNIDLPAATKKGVMVMNTPGGNTVSTAQLAFSLLAVSARSLARADMSMKEGKWERSKFMGTELAGKTLAVVGCGRIGQQVARWGQAFDMTVVGFDPVLPAASFKELGIKKCDLDKIWPQADFITLHTPLTPDTKNLVNAESLAQMKKGVHIVNCARGGIVNEMDLLASLEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIAIQMCDTLESKDFVGVCNVGYMSIAQNQAIRPFADLAQQLGRVASQ-FALGKITKLTISTWGQTDISITSADARALLKAQALVGLLSTKDTQGVLPGIVNAPFLAEEAGV-VGEALKETPALASIASPYRNLITVEAHVEG--GGVTSVTGSVF-GNEPCLVSLDNYK-NFPALNLHDGSVLKFRNRDEPGAVSGVLEVLEEHKVNIANLTLGRQ-DADLALCLMSVDGEVPAAAVEQLKGLAQLNDVRTAKL 575
            M+ RA+  G    G     T R ++  ++  LAKIL +D+ D +C + FK RGH+VD K GLSKEEL  II QY GLVVRSATKVT D++AAA  L V+GRAG GVDNID PAAT +GV+V+NTPGGNT+STA+L F+ +   +R++ +A  S+K GKWERSK+ GTEL GKTLAV+G GRIG++VARWG+AF MT +GFDP++ AA+ +  GI+   LD++W +ADFITLHTPLT DT+ L+NA++L + KKGV I+NCARGGI++E  LL +LE+GHVGGA+LDVYE EPPGE+ + L+ HP +  TPHLGA+T++AQV VAKDIAIQ+ D LE KDFVGV N   +  A+   + P+  LA+++G + +Q    GKI ++ ++  G+ D+++  ++    +K   L G LS    Q V    +NA  LA + G+ V   L E        + + N I V+  ++G      S++G+VF G+E  +  +D +K + P      GSV+ F N D PGA+  +  VL ++  NI++ +LGRQ  A  AL  +++D  VP   +E++  L  +++    +L
Sbjct:    1 MLSRAV-TGLQASGKAGIVTGRRNISHTQARLAKILLSDATDKICAEQFKARGHDVDSKPGLSKEELKQIIGQYDGLVVRSATKVTKDILAAATNLKVVGRAGTGVDNIDTPAATMQGVLVVNTPGGNTISTAELTFTHMLALSRNIPQAVASLKAGKWERSKYTGTELTGKTLAVIGLGRIGREVARWGRAFGMTTIGFDPIVSAAAARSAGIEPVPLDELWAKADFITLHTPLTKDTRYLINADTLKKCKKGVRIINCARGGIIDEKALLEALESGHVGGASLDVYETEPPGEAERPLINHPRIVSTPHLGANTKDAQVRVAKDIAIQLSDILEQKDFVGVVNAPNIDFARKSQLIPYIQLAEKIGSLQAQLIGSGKIKRINVTMQGK-DVAV--SEMSDSIKIAVLKGTLSHLLDQDV--NFLNAGPLASDMGLSVNSMLVERQ-----DTQFSNTIKVDFEMDGFLNFSRSISGTVFGGSELRIFEIDGFKTDIPP----TGSVVFFNNLDRPGALKAIANVLSKNHCNISHFSLGRQTKAGKALGAITLDEPVPQNVLEEIGVLPDISNCSQVQL 565          
BLAST of NO28G01160 vs. NCBI_GenBank
Match: AKQ03512.1 (D-3-phosphoglycerate dehydrogenase, D-3-phosphoglycerate dehydrogenase [uncultured Ignavibacteria bacterium Rifle_16ft_4_minimus_38087])

HSP 1 Score: 412.9 bits (1060), Expect = 1.600e-111
Identity = 233/542 (42.99%), Postives = 342/542 (63.10%), Query Frame = 0
Query:   35 KILCADSIDPVCIQIFKERGHEVDYKVGLSKEELLNIIPQYHGLVVRSATKVTGDVIAAADKLVVIGRAGVGVDNIDLPAATKKGVMVMNTPGGNTVSTAQLAFSLLAVSARSLARADMSMKEGKWERSKFMGTELAGKTLAVVGCGRIGQQVARWGQAFDMTVVGFDPVLPAASFKELGIKKCDLDKIWPQADFITLHTPLTPDTKNLVNAESLAQMKKGVHIVNCARGGIVNEMDLLASLEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIAIQMCDTLESKDFVGVCNVGYMSIAQNQAIRPFADLAQQLGRVASQFALGKITKLTISTWGQTDISITSADARALLKAQALVGLLSTKDTQGVLPGIVNAPFLAEEAGVVGEALKETPALASIASPYRNLITVEAHVEGGGVTSVTGSVFGN-EPCLVSLDNYKNFPALNLHDGSVLKFRNRDEPGAVSGVLEVLEEHKVNIANLTLGRQD-ADLALCLMSVDGEVPAAAVEQLKGLAQLNDVRTAKL 575
            +IL +D I+ VC  + ++ G EVD + G+  EEL  II +Y GLVVRS+T+VT ++I  A+++ VIGRAG GVDNID  AAT++G++VMNTPGGNT+STA+   SLL   AR++ ++  S++EGKWER K+ G EL GKT+ +VG G++G++VA   QAF M  +GFDPVL A    +L I+   L +I+ QAD IT+HTPL  +T+ L+  E +   K+GV ++NCARGGIV+E  LL  LE+G +GGAALDV+ +EPP  +  +LL HP +  TPHLGASTEEAQ  VAK IAIQ+ D L  +   G  N   + +A  Q ++P+  LA++LG + +Q   GK+ ++T++  GQ     +   A A LK     G+LS + T+ V   +VNA  +A E G+   +L+E   L      Y  LI V+ +    G   V G+VF N  P +V +D Y       + +G++L ++N D PG ++ V  +L    +NIA L LGR +    AL +++VD  +P A + +++ +  + +VR+AKL
Sbjct:    2 RILISDQIESVCADVLRKEGFEVDLRPGMKNEELKKIIGEYEGLVVRSSTQVTSEIIGLAERMRVIGRAGAGVDNIDCDAATRRGIVVMNTPGGNTISTAEHTVSLLLSMARNIPQSFESLREGKWERKKYTGVELFGKTIGIVGLGKVGREVATRCQAFGMKTIGFDPVLSADVAAKLDIQLVSLQEIYAQADVITVHTPLNDETRGLIGDEQIKACKQGVRLINCARGGIVDEGALLRGLESGKIGGAALDVFVQEPP--TNTELLRHPKLIATPHLGASTEEAQEKVAKQIAIQVADLLHERGVSGAVNAEVIQMAMRQDLKPYVRLAEKLGSLVAQLVAGKLKRITVTAVGQPITQSSELIASATLK-----GVLSQRLTEPV--NLVNALIIARELGI---SLEEKRGLD--GGSYTQLIKVD-YESDQGRKEVAGTVFDNSHPRIVQMDGYH---LEMVPEGTMLFYKNIDRPGMLAAVGSILAGEGINIAGLALGRDEPGKRALTIINVDSPIPQAILRKMEMIEGVFEVRSAKL 525          
BLAST of NO28G01160 vs. NCBI_GenBank
Match: PKP77723.1 (phosphoglycerate dehydrogenase [Alphaproteobacteria bacterium HGW-Alphaproteobacteria-3])

HSP 1 Score: 411.4 bits (1056), Expect = 4.700e-111
Identity = 242/541 (44.73%), Postives = 329/541 (60.81%), Query Frame = 0
Query:   33 LAKILCADSIDPVCIQIFKERGHEVDYKVGLSKEELLNIIPQYHGLVVRSATKVTGDVIAAADKLVVIGRAGVGVDNIDLPAATKKGVMVMNTPGGNTVSTAQLAFSLLAVSARSLARADMSMKEGKWERSKFMGTELAGKTLAVVGCGRIGQQVARWGQAFDMTVVGFDPVLPAASFKELGIKKCDLDKIWPQADFITLHTPLTPDTKNLVNAESLAQMKKGVHIVNCARGGIVNEMDLLASLEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIAIQMCDTLESKDFVGVCNVGYMSIAQNQAIRPFADLAQQLGRVASQFALGKITKLTISTWGQTDISITSADARALLKAQALVGLLSTKDTQGVLPGIVNAPFLAEEAGVVGEALKETPALASIASPYRNLITVEAHVEGGGVTSVTGSVF-GNEPCLVSLDNYKNFPALNLHDGSVLKFRNRDEPGAVSGVLEVLEEHKVNIANLTLGRQDA-DLALCLMSVDGEVPAAAVEQLKGLAQLNDVRT 572
            + K+L +DS+ P  +QIFK+RG EVD K GL ++EL+ II +Y GL +RSATKVT  V+AAA KL V+GRAG+GVDN+DLPAAT  GV+VMNTP GN+++TA+ A S++   AR + +A+ S   GKWE+SKFMG E+ GK L ++GCG IG  VA  G    M VV FDP L     ++LG++K +LD++  +ADFITLHTPLT  T+N++NAES+A+ KKGV IVNCARGG++ E DL A++EAGHV GAALDV+E+EP    T  L     V CTPHLGAST EAQ NVA  +A QM D L +       NV  +S  +   + PF  LAQQLG  A Q     I+ +TI   G     +   + R L  A AL GLL     Q     +V+AP +A+E  +     K +         Y   I +    E     SV G+VF G  P ++ + +      L  H   +L   N+D+PG +  +   L +  +NIAN  LGR+ A   A+CL+ VDG+V AA + +++ L  +  V++
Sbjct:    1 MPKVLISDSLSPAAVQIFKDRGVEVDVKTGLDRDELIKIIGEYDGLAIRSATKVTPQVLAAAKKLKVVGRAGIGVDNVDLPAATAAGVIVMNTPFGNSITTAEHAISMMLSLARDIPQANASTHAGKWEKSKFMGVEVTGKVLGIIGCGNIGSIVADRGLGLRMKVVAFDPFLTPERAQDLGVEKVELDELLKRADFITLHTPLTDKTRNILNAESIARCKKGVRIVNCARGGLIVEADLKAAIEAGHVAGAALDVFEEEP--AKTNPLFGMEQVICTPHLGASTNEAQENVALQVAEQMADYLLTGAITNSINVPSVSAEEAPKLTPFLTLAQQLGSFAGQLTETGISAVTIEYAG----DVAEMNTRVLTNA-ALTGLLK---PQLADVNMVSAPVIAKERDI-----KVSEVKTEQQGAYETYIRLTVKTE-RQERSVAGTVFSGGLPRIIQIKSVDMEATLGRH---MLYVTNQDKPGFIGALGSTLGKAGINIANFNLGREAAGGDAICLIEVDGDVTAATLAEIQALPHVVQVKS 522          
BLAST of NO28G01160 vs. NCBI_GenBank
Match: GBE33090.1 (D-3-phosphoglycerate dehydrogenase [bacterium BMS3Bbin05] >GBD99403.1 D-3-phosphoglycerate dehydrogenase [bacterium BMS3Abin07])

HSP 1 Score: 410.6 bits (1054), Expect = 8.000e-111
Identity = 227/543 (41.80%), Postives = 345/543 (63.54%), Query Frame = 0
Query:   35 KILCADSIDPVCIQIFKERGHEVDYKVGLSKEELLNIIPQYHGLVVRSATKVTGDVIAAADKLVVIGRAGVGVDNIDLPAATKKGVMVMNTPGGNTVSTAQLAFSLLAVSARSLARADMSMKEGKWERSKFMGTELAGKTLAVVGCGRIGQQVARWGQAFDMTVVGFDPVLPAASFKELGIKKCDLDKIWPQADFITLHTPLTPDTKNLVNAESLAQMKKGVHIVNCARGGIVNEMDLLASLEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIAIQMCDTLESKDFVGVCNVGYMSIAQNQAIRPFADLAQQLGRVASQFALGKITKLTISTWGQ-TDISITSADARALLKAQALVGLLSTKDTQGVLPGIVNAPFLAEEAGVVGEALKETPALASIASPYRNLITVEAHVEGGGVTSVTGSVFG-NEPCLVSLDNYKNFPALNLHDGSVLKFRNRDEPGAVSGVLEVLEEHKVNIANLTLGRQ-DADLALCLMSVDGEVPAAAVEQLKGLAQLNDVRTAKL 575
            K+L +D++ P  I+I K+ G  VD K G+S +EL + I +Y G+V+RSATK+T DVI AA+ L VIGRAG G+DN+D   A+KKG++VMNTPGGNT++TA+ AFS++   AR + +A  S+K+GKWE+ KFMG EL  KTL +VG G IG Q A+     +M V+ +DP L     +E+G++K +L+ ++ ++DFIT+HTPLT DTK L+N +S+A MK GV ++NCARGGI+NE DL  ++++G V GAALDV+EKEPP  +   LL    V CTPHLGAST EAQ NVA  +A Q+ D L +       N   + + Q   I+P+  LA+++G  ASQ   G I+++T+   G+ +DI+       A +   A+ G+L+    + V    VNAPF+A+E G+    +KET +  S    Y+N++ ++   + G    + G+++G  +P +V +D   NFP   + +G +L  +N D PG +  +  +L E+ +NIA +  GR+     A+ ++SVD E+P   V ++K +  +N V+  +L
Sbjct:    2 KVLVSDNLSPKGIEILKKAGLRVDVKTGMSPDELKSCIGEYDGIVIRSATKMTSDVIEAAENLKVIGRAGSGLDNVDRNEASKKGIVVMNTPGGNTITTAEHAFSMMMSLARKIPQATASLKKGKWEKKKFMGVELFNKTLGIVGIGNIGGQFAKRAHGLEMNVIAYDPFLSDEKAREMGVEKVELEDLFKRSDFITVHTPLTADTKYLINKDSIALMKDGVRLINCARGGIINEQDLYDAIKSGKVAGAALDVFEKEPP--AGNPLLELEEVICTPHLGASTTEAQENVAVKVAEQIVDYLVNGTIRNAVNFPSIPVDQIPRIQPYITLAEKMGAFASQIYEGSISEITLEFRGEASDIN------AAPVTIAAIKGILNPILEESV--NFVNAPFIAKERGI---EIKETKSEGS--GDYQNMLVLKVKYD-GNENEIAGTLYGRKDPRIVRID---NFPVEVMPEGMLLYIQNNDMPGVIGNIGMILGENGINIARMHFGRELKGGRAISVVSVDAEIPDDIVNKIKAMPNINQVKIIRL 525          
BLAST of NO28G01160 vs. NCBI_GenBank
Match: WP_012111057.1 (phosphoglycerate dehydrogenase [Parvibaculum lavamentivorans] >ABS63752.1 D-3-phosphoglycerate dehydrogenase [Parvibaculum lavamentivorans DS-1])

HSP 1 Score: 405.2 bits (1040), Expect = 3.400e-109
Identity = 238/541 (43.99%), Postives = 328/541 (60.63%), Query Frame = 0
Query:   33 LAKILCADSIDPVCIQIFKERGHEVDYKVGLSKEELLNIIPQYHGLVVRSATKVTGDVIAAADKLVVIGRAGVGVDNIDLPAATKKGVMVMNTPGGNTVSTAQLAFSLLAVSARSLARADMSMKEGKWERSKFMGTELAGKTLAVVGCGRIGQQVARWGQAFDMTVVGFDPVLPAASFKELGIKKCDLDKIWPQADFITLHTPLTPDTKNLVNAESLAQMKKGVHIVNCARGGIVNEMDLLASLEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIAIQMCDTLESKDFVGVCNVGYMSIAQNQAIRPFADLAQQLGRVASQFALGKITKLTISTWGQTDISITSADARALLKAQALVGLLSTKDTQGVLPGIVNAPFLAEEAGV-VGEALKETPALASIASPYRNLITVEAHVEGGGVTSVTGSVF-GNEPCLVSLDNYKNFPALNLHDGSVLKFRNRDEPGAVSGVLEVLEEHKVNIANLTLGRQDA-DLALCLMSVDGEVPAAAVEQLKGLAQLNDVR 571
            + K+L +D + P  +QIFK+RG EVD K GL ++EL+ II  Y GL +RSATKVT  V+AAA KL V+GRAG+GVDN+DLPAAT  GV+VMNTP GN+++TA+ A +++   AR + +A+ S   GKWE+SKFMG E+ GK L ++GCG IG  VA  G    M V+ FDP L     +++G++K +L+ +  +ADFITLHTPLT  T+N++NAE+LA+ KKGV IVNCARGG++ E DL A++E+GHV GAALDV+E+EP    +  L     V CTPHLGAST EAQ NVA  +A QM D L +       NV  +S  +   + PF  LAQQLG  A Q     I+++TI   G     +   + R L  A AL GLL  +        +V+AP +A++  + V E  +E          Y  LI      E     SV G+VF G  P L+ + +     AL  H   +L   N D+PG +  +   L +  +NIAN  LGR+ A   A+CL+ VD +VPAA + +++ L  +  V+
Sbjct:    1 MPKVLISDQLSPAAVQIFKDRGLEVDVKTGLDRDELIKIIGDYDGLAIRSATKVTPPVLAAAKKLKVVGRAGIGVDNVDLPAATAAGVIVMNTPFGNSITTAEHAIAMMFALARDIPQANASTHAGKWEKSKFMGVEVTGKVLGIIGCGNIGSIVADRGIGLRMKVIAFDPFLTPERAQDMGVEKVELEDLLKRADFITLHTPLTDKTRNILNAENLAKCKKGVRIVNCARGGLIVESDLKAAIESGHVAGAALDVFEEEP--AKSNPLFGMDQVICTPHLGASTNEAQENVALQVAEQMADYLLTGAVTNSINVPAVSAEEAPKLTPFLTLAQQLGSFAGQLTESGISEVTIEYAG----DVAEMNTRVLTNA-ALTGLLKPQLED---VNMVSAPVIAKDRNIKVSEVKREQ---QGAYETYIRLIVKTERQE----RSVAGTVFSGGLPRLIQIKSVNMEAALGRH---MLYVTNLDKPGFIGALGSTLGKAGINIANFNLGREKAGGDAICLIEVDADVPAATLAEIQALPHVVQVK 521          
BLAST of NO28G01160 vs. NCBI_GenBank
Match: OGU75147.1 (phosphoglycerate dehydrogenase [Ignavibacteria bacterium RBG_16_34_14])

HSP 1 Score: 401.7 bits (1031), Expect = 3.700e-108
Identity = 221/545 (40.55%), Postives = 342/545 (62.75%), Query Frame = 0
Query:   33 LAKILCADSIDPVCIQIFKERGHEVDYKVGLSKEELLNIIPQYHGLVVRSATKVTGDVIAAADKLVVIGRAGVGVDNIDLPAATKKGVMVMNTPGGNTVSTAQLAFSLLAVSARSLARADMSMKEGKWERSKFMGTELAGKTLAVVGCGRIGQQVARWGQAFDMTVVGFDPVLPAASFKELGIKKCDLDKIWPQADFITLHTPLTPDTKNLVNAESLAQMKKGVHIVNCARGGIVNEMDLLASLEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIAIQMCDTLESKDFVGVCNVGYMSIAQNQAIRPFADLAQQLGRVASQFALGKITKLTISTWGQTDISITSADARALLKAQALVGLLSTKDTQGVLPGIVNAPFLAEEAGVVGEALKETPALASIASPYRNLITVEAHVEGGGVTSVTGSVFG-NEPCLVSLDNYKNFPALNLH-DGSVLKFRNRDEPGAVSGVLEVLEEHKVNIANLTLGRQDADL-ALCLMSVDGEVPAAAVEQLKGLAQLNDVRTAKL 575
            + KI+  D++D  C  +F+  G EV Y+ G+S+ E+  IIP Y+GL+VRS T+V  ++I+  + + VIGRAG GVDNID+ AAT+KG++VMNTPGGNT+STA+   +L+    R++A+A+ SM+ GKW+R  + GTEL  KTL ++G G+IG++VA   +AF M V+ FDPV+      +L +   DL+K++ ++D IT+H PL  DT+ L++A +L + K GV I+NCARGGI+NE DL+++L++G V  AA DVYE EPP + + +L+ HP V  TPHLGASTEEAQ  VA  IA Q+ +  + K   G+ N   + +  +  I P+  LA+ +G + SQ   G++ ++ I+  G    S     A  L+ A  L G LS K ++ V   ++NAP+LA+E G+V   +K         S Y NL++VE   + G    + G+VFG NE  +V++D+Y     L L  +G +L + N D+PG ++ V + L E  +NIA L+LGR +A   AL +++ D E+    + ++  +  + D++  K+
Sbjct:    1 MKKIIITDAVDKKCAAVFEAGGFEVKYQPGISRNEIKKIIPVYNGLIVRSETQVDSELISLMNNMEVIGRAGTGVDNIDVDAATRKGILVMNTPGGNTISTAEHTMALMVSMCRNIAQANQSMRSGKWDRKTYKGTELHSKTLGIIGLGKIGREVAIRSKAFGMNVIAFDPVVSGDLANKLEVDLVDLNKVFEKSDIITVHVPLNDDTRYLISANTLQKCKDGVKIINCARGGIINETDLISALDSGKVSAAAFDVYETEPP-DFSGRLINHPKVVATPHLGASTEEAQEKVAIQIAEQVIELFQKKSARGIVNAAAIEVESDNQITPYVRLAENIGILHSQIIRGQLKQININFSGDLLHS-----AATLITASFLKGFLSRKLSESV--NLINAPYLAKEIGIVINEIK-----TGANSSYTNLLSVECETDRGN-RLLEGTVFGNNELRIVNIDSYH----LELKPEGHMLFYYNLDKPGMLATVGKALAEADINIAGLSLGRLEAGKEALTIINTDSEIDQKVLNRISAIKGVKDIQKVKI 527          
BLAST of NO28G01160 vs. NCBI_GenBank
Match: OGU42653.1 (phosphoglycerate dehydrogenase [Ignavibacteria bacterium GWA2_36_19] >OGU53145.1 phosphoglycerate dehydrogenase [Ignavibacteria bacterium GWC2_35_8] >OGU61517.1 phosphoglycerate dehydrogenase [Ignavibacteria bacterium GWF2_35_20] >OGU85549.1 phosphoglycerate dehydrogenase [Ignavibacteria bacterium RIFOXYA12_FULL_35_25] >OGU90317.1 phosphoglycerate dehydrogenase [Ignavibacteria bacterium RIFOXYC12_FULL_35_11] >OGU96754.1 phosphoglycerate dehydrogenase [Ignavibacteria bacterium RIFOXYB12_FULL_35_14] >OGU98171.1 phosphoglycerate dehydrogenase [Ignavibacteria bacterium RIFOXYC2_FULL_35_16] >OGV05035.1 phosphoglycerate dehydrogenase [Ignavibacteria bacterium RIFOXYB2_FULL_35_12] >OGV32222.1 phosphoglycerate dehydrogenase [Ignavibacteria bacterium RIFOXYD12_FULL_36_8])

HSP 1 Score: 400.6 bits (1028), Expect = 8.300e-108
Identity = 223/545 (40.92%), Postives = 353/545 (64.77%), Query Frame = 0
Query:   33 LAKILCADSIDPVCIQIFKERGHEVDYKVGLSKEELLNIIPQYHGLVVRSATKVTGDVIAAADKLVVIGRAGVGVDNIDLPAATKKGVMVMNTPGGNTVSTAQLAFSLLAVSARSLARADMSMKEGKWERSKFMGTELAGKTLAVVGCGRIGQQVARWGQAFDMTVVGFDPVLPAASFKELGIKKCDLDKIWPQADFITLHTPLTPDTKNLVNAESLAQMKKGVHIVNCARGGIVNEMDLLASLEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIAIQMCDTLESKDFVGVCNVGYMSIAQNQAIRPFADLAQQLGRVASQFALGKITKLTISTWGQTDISITSADARALLKAQALVGLLSTKDTQGVLPGIVNAPFLAEEAGVVGEALKETPALASIASPYRNLITVEAHVEGGGVTSVTGSVFG-NEPCLVSLDNYKNFPALNLH-DGSVLKFRNRDEPGAVSGVLEVLEEHKVNIANLTLGRQDADL-ALCLMSVDGEVPAAAVEQLKGLAQLNDVRTAKL 575
            + KIL +DSID  C  I +  G+EV YK G++ +++ + I  Y+GL+VRS TKV  ++I+  +++ +IGRAG GVDNID+  AT++G++VMNTPGGNT+S A+   +L+    R++ +A++S+KE KWER KF GTEL GKTL ++G G+IG++VA   ++F M ++G+DP+    +  ++GI+  DLD ++ QAD I+LH PL+ +TK+L++ E+L + K GV I+NCARGGIVNE DL+A+L++G V  AA+DV+EKEPP + ++++  HP + CTPHLGASTEEAQ  VA  IA QM +  E K   GV N   +     + I PF  LA+ +G++ +Q     + ++ I+  G    S+    A +LL A  L GLLS   T+ +    +N+P LA+E G+    + ET +  ++   Y NL++VE  +         G+VFG NE  +V +D+Y     L +  +G++L + N D+PG ++ V + L E K+NIA L+LGR +A   AL +++VD ++   A++Q+  +  +++V + ++
Sbjct:    1 MKKILISDSIDKKCSIILQSYGYEVTYKPGMTPDQIKSEIGNYNGLIVRSETKVNAEIISRMEEMEIIGRAGTGVDNIDVNTATRRGIIVMNTPGGNTISAAEHTMALMLSMCRNIPQANISLKEAKWERKKFQGTELFGKTLGIIGLGKIGREVAARSKSFGMKIIGYDPLFSDEAASKIGIELFDLDTLFAQADIISLHVPLSTETKHLISTETLRKCKNGVKIINCARGGIVNENDLIAALDSGKVSAAAIDVFEKEPP-DFSQRIFEHPKMICTPHLGASTEEAQEKVAIQIAEQMHNFFEHKKMYGVVNASGLEAISKKEILPFVALAESIGKIYAQMIRNPLKQININYCG----SLLHLSA-SLLSASLLKGLLSKLLTENI--NFINSPVLAKEMGI---KINETKSDENL--NYTNLLSVE-FLSDKDKRFFAGTVFGSNEIRIVKIDDY----LLEVKPEGNLLLYSNIDKPGMIAAVGKKLSEAKINIAGLSLGRLEAGKEALTVINVDHKIEENALDQISKIEGVHNVYSVQI 527          
The following BLAST results are available for this feature:
BLAST of NO28G01160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM20885.11.600e-19688.43d-3-phosphoglycerate dehydrogenase [Nannochloropsi... [more]
CBJ29093.11.600e-16451.92D-3-phosphoglycerate dehydrogenase [Ectocarpus sil... [more]
EWM20886.11.200e-15486.62d-3-phosphoglycerate dehydrogenase [Nannochloropsi... [more]
EWM30503.11.100e-13146.90phosphoserine aminotransferase [Nannochloropsis ga... [more]
AKQ03512.11.600e-11142.99D-3-phosphoglycerate dehydrogenase, D-3-phosphogly... [more]
PKP77723.14.700e-11144.73phosphoglycerate dehydrogenase [Alphaproteobacteri... [more]
GBE33090.18.000e-11141.80D-3-phosphoglycerate dehydrogenase [bacterium BMS3... [more]
WP_012111057.13.400e-10943.99phosphoglycerate dehydrogenase [Parvibaculum lavam... [more]
OGU75147.13.700e-10840.55phosphoglycerate dehydrogenase [Ignavibacteria bac... [more]
OGU42653.18.300e-10840.92phosphoglycerate dehydrogenase [Ignavibacteria bac... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL059nonsL059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR065ncniR065Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR094ngnoR094Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004920NSK004920Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO28G01160.1NO28G01160.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|609305gene_9845Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO28G01160.1NO28G01160.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO28G01160 ID=NO28G01160|Name=NO28G01160|organism=Nannochloropsis oceanica|type=gene|length=4391bp
ACTACAACGTTGTGGCCGATGGTGCGATCAACCTGGTCAGCACCCAGGCG
AAAGATGCCTCAGACTACAGTTCTTGTCGTCTTTGTTTCCTTTGAAATGG
CGCACCTATTATACTGTTTTGCTCCAAAACACAATCGGGAAGCGAAATAG
CACAACACGATAGTGATAAGAAGAGTGGGGGGGAGGTCGGCTGGGAGGAG
AAAGGGACACGGCATGTCTCATGCTCTCTTTGAGCTAGTGGCATACACTG
TCTCCTTGCAATACCAATGTATCTGCATTTAGGCATATATACACCCAACA
CACATCCAACACACAAATCCAAGCACCAAAGAGAGGGTCGTGGAACAACG
CCCCAACGCCACTCGGATTTGTTGAAGTACTCGTTCATCTGTCGCCCGTC
GACGCTCATCTTCTCCTCCATCCGCCTAACGCTGGCGCACCCTTGCTTGC
CCATGTGACCATCCTCTTCACTTTTTTTCGGTCCCTCACTCCTCGTTTTC
ATACCCTTTTAATCTCTTGTCAACCTGCATACGGAAACATTCCCCTATCA
GCTCAAACAAGCATGATGATGCGTCGGGCCCTGCAGCGCGGCAGCAGCGT
CGGCGGGCATTACCTGCAGCAAACCCAGAGGGCCCACCTACACGCATCTC
GGCCTACCTTGGCCAAGATTTTGTGTGCGGATAGCATTGACCCGgtaaga
agagatggggggaaaggaaggagagagggatgaagggtgaccttgtttgg
gcgccatgtggggggcgtcgtgcaggcgaaagcaagttgatgatgcatgt
gagtgtgtggaagcaagggaagggacatacggacatgcgtgcattgcagg
ctcaacgctgcatgttgctgttccagcacggcaaataagaagaggatagg
agatatgtaaccatgtcttttagaacatgaagtggatcacactttttggt
ccagctgactttaataatatggttggtagcagcagtagtttgttcctcgg
aagacgagcatcttacacatcacctctccctccttcccgtccttccatca
ttcttcccagGTGTGCATCCAAATCTTTAAGGAGCGTGGACATGAAGTTG
ATTACAAAGTGGGCTTGTCGAAGGAAGAATTGTTGAACATAATCCCTCAA
TATCACGGCCTCGTCGTCCGCTCTGCTACCAAGgtatgtccttctctcct
tccctccttccttccctcccgtccctccctccctccatttcctcttcttt
tgtccgtccatcgttctttctatgcccttttagtcatatgaggcccgtat
gaacaacactcatcctccctcccttccttcctcttcctcagGTGACGGGC
GATGTGATCGCCGCTGCTGACAAGCTTGTCGTCATCGGCCGGGCCGGAGT
TGGTGTAGACAATATCGACCTCCCTGCCGCCACTAAGAAGGGTGTAATGG
TGATGAATACTCCCGgtaagtcaatcttccctctctccctgcccccctcc
ctcctcccctcaggtgtgcctttcctcattcccttctttcttcgtcccct
ccctcatgttagGCGGCAACACCGTCTCAACGGCCCAGCTTGCCTTCTCT
CTTCTGGCCGTTTCTGCACGGTCGTTGGCGCGCGCGGACATGTCGATGAA
GGAGGGGAAGTGGGAGAGGAGCAAGTTCATGGGCACGGAACTGGCGGGGA
AGACGCTGGCCGTCGTCGGGTGTGGTCGCATAGGGCAGCAGGTCGCCAGG
TGGGGTCAGgtgagttgcatatacttgaatatagatatttagcgtattta
ttcagtaatttgaatttgatttaacattttggtttttcatttgaagtcat
ttctttgggtgtttcaaaataggactagggaataattcattcttcctccc
gccccccctttcctccatccctccctccagtcatcccacccctctgcctt
tctttttctgtaacatccgccaatacgtatctcacgcctccctccctccc
tctctctctccctccctccctggcagGCCTTCGACATGACCGTGGTGGGC
TTTGATCCCGTACTACCCGCGGCGTCCTTCAAGgtggcagggagggaggg
agggagggaggaagagaggaagggagagagattgaggataatctcagttg
attggtatatttttaatgcacataaagtcatgcaatttatatcctcttcc
ttatttctttatttaattatgtaattatttattattatatttatttatgg
attgattgattgatctattatttatttatttatttatttatttatttatt
tatttatttatttttatatatatatatatgtatatatatttatccacagG
AGCTGGGCATCAAGAAATGCGACCTGGACAAGATCTGGCCGCAGGCTGAC
TTCATCACCCTCCACACACCCCTAACGCCCGACACCAAGAACCTGGTCAA
CGCGGAGAGCTTGGCGCAGATGAAGAAAGGGGTGCACATTGTCAACTGTG
CGCGGGGGGGGATCGTGAATGAGATGGACTTGTTGGCCTCCTTGGAGGCA
GGGCACGTGGGCGGCGCGGCTCTGGATGTGTATGAGAAGgtaaggaaggg
gggagggggaaagagtgagggggagggagagcaagcaagaggtggtttcg
gttccctttgaccgcgtgctcataacttccacccctccctccctccctcc
ctccccgggcacagGAACCGCCCGGAGAGAGCACCAAGAAATTGCTCGCG
CACCCCAACGTCAGCTGTACCCCCCACCTGGGCGCCAGCACGGAGGAAGC
GCAGGTCAACGTGGCCAAGGACATCGCCATCCAGATGTGCGATACTCTCG
AGAGCAAAgtatgttcgtcgggaacgggtgtttccctcctcccctccctc
cctccctccctccctcccttctttcctcccttcctccctccctcggtatc
agaatcatttcccctgtcaaccaaacattataaccacgacataaccctcc
ctccctcctttcctccccccctccagGATTTCGTGGGCGTGTGCAATGTG
GGCTACATGTCCATCGCTCAGAACCAGGCCATCCGACCATTCGCGGACCT
GGCGCAACAACTCGGTCGAGTCGCATCTCAGTTTGCCCTCGGGAAGATCA
CGAAACTCACCATCTCCACCTGGGGCCAGACGGACATAAGCATCACGAGT
GCCGACGCCCGGGCCCTCCTCAAGGCCCAGGCCCTCGTCGGCCTCCTCTC
CACCAAGGACACCCAGGGCGTACTGCCGGGTATTGTGAACGCGCCCTTTT
TGGCGGAAGAGGCGGGGGTGGTGGGGGAGGCACTGAAGGAGACGCCGGCC
TTGGCCAGCATTGCGAGCCCGTACCGTAACCTTATCACGGTGGAGGCGCA
CGTGGAGGGGGGAGGGGTAACCTCTGTGACTGGATCTGTCTTTGGAAATG
AACCCTGCCTTGTGAGCTTGGACAACTACAAGAATTTCCCGGCGTTGAAC
TTGCACGATGGCTCCGTACTCAAGTTCAGGAATAGGgtatgtcctctcac
tccccccctcccttcctctccctttccagcatgcgtgtgtggggatgaat
gagcctgtatagtgtgcttggggagcacgtgaagaggactacgtggacac
tgaatctgtatggcggtatgggcatgtgggcatgatagccaggtgctaaa
gtttaaaagttatgctgggttagagcacaactcatcggagagatgcctac
tcaagccttccgtcggtttttctctccctccctccctcccaccctccttg
ttttgtgtgttaagattacactaacataaaagcctctcttgggctgtttc
ctctgtgcttgaagaaggtatcggatgtattccacttccattgtgtgaag
gagaaatcgatatgcctcctgactctattccctccctgcctccctccctc
tcttgcttcacagGACGAGCCCGGGGCTGTTTCGGGCGTGCTGGAGGTGC
TGGAGGAGCACAAGgtgggtcgatttaagcgtggggacaggaaggggaag
ggacgtaggaacggagggacggaggaggcgtgtcgcgcatgtttacctgg
gaaagagcaatggtgtctatgatagagcgtctttaatctcattctctccc
tccctccctccctccctccctccctccctccctccctccctccctccctc
cctcctttcccccagGTCAACATCGCAAATCTGACCTTGGGACGGCAAGA
TGCTGACTTGGCGCTGTGCCTGATGAGCGTGGATGGGGAGGTGCCCGCAG
CCGCAGTAGAGCAGCTGAAGGGCCTGGCTCAATTGAACGACGTGCGTACG
GCCAAGCTGGGAGGTAATGTATGAAAGAGAGGAGGGGAGGG
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protein sequence of NO28G01160.1

>NO28G01160.1-protein ID=NO28G01160.1-protein|Name=NO28G01160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=579bp
MMMRRALQRGSSVGGHYLQQTQRAHLHASRPTLAKILCADSIDPVCIQIF
KERGHEVDYKVGLSKEELLNIIPQYHGLVVRSATKVTGDVIAAADKLVVI
GRAGVGVDNIDLPAATKKGVMVMNTPGGNTVSTAQLAFSLLAVSARSLAR
ADMSMKEGKWERSKFMGTELAGKTLAVVGCGRIGQQVARWGQAFDMTVVG
FDPVLPAASFKELGIKKCDLDKIWPQADFITLHTPLTPDTKNLVNAESLA
QMKKGVHIVNCARGGIVNEMDLLASLEAGHVGGAALDVYEKEPPGESTKK
LLAHPNVSCTPHLGASTEEAQVNVAKDIAIQMCDTLESKDFVGVCNVGYM
SIAQNQAIRPFADLAQQLGRVASQFALGKITKLTISTWGQTDISITSADA
RALLKAQALVGLLSTKDTQGVLPGIVNAPFLAEEAGVVGEALKETPALAS
IASPYRNLITVEAHVEGGGVTSVTGSVFGNEPCLVSLDNYKNFPALNLHD
GSVLKFRNRDEPGAVSGVLEVLEEHKVNIANLTLGRQDADLALCLMSVDG
EVPAAAVEQLKGLAQLNDVRTAKLGGNV*
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Synonyms
Publications