NO28G00990, NO28G00990 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G00990 vs. NCBI_GenBank
Match: CBN76135.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 295.8 bits (756), Expect = 2.300e-76 Identity = 142/278 (51.08%), Postives = 192/278 (69.06%), Query Frame = 0 Query: 92 TAAYEVLFVRHGQSTWNRDNRFIGWTDVPLTEQGLEEAREAGRVLAREGVKVDEVHTSLLKRCIKTAWTILRELGQEYTPVHCHWRLNERSYGSLVGLEKKSTVARHGVETVRTWRRSFDVRPPPQRMDDKYWPGKDKKYKKLLASGTLPRIPAAECLKDVKERAAAHWEEVVVPAIKAGKRVVVVGHENNLRALFMHIDQVAPEDMLHVEIPRAAPLRYQFDAQMKPVRQAEPAPFLTGQFLISAE-------NVAAVKERDSRQVYDLRITSNLEK 363 T AYEV+FVRHGQSTWN+ NRFIGWTD LTE+G EAR AG++L + + D ++TS+LKR IKTAW +L EL Q++ PV W LNER YG+LVG EKK V G E V+ WRRS+D+ PPP K WPG + +YK L+ G ++P E LKDV R++A+W+EV+ PAI++GKRV V GHENNLR+L +ID ++ D++HVE+PRA PL Y D ++P+R A A L+G ++ E +AA++ERD + VYDL +++NLE+ Sbjct: 19 THAYEVVFVRHGQSTWNKANRFIGWTDAELTEEGEIEARVAGQLLLSQEFEFDVIYTSMLKRAIKTAWVVLDELNQQHVPVTTDWHLNERCYGALVGREKKECVRSFGAEQVKIWRRSWDIPPPPIDKSSKLWPGNNPRYKFLMQDGE-SQVPLHESLKDVMSRSSAYWDEVIAPAIRSGKRVCVCGHENNLRSLLKYIDGISNADIMHVELPRAVPLVYHLDEDLRPMRLANSAEHLSGGYVGDPEEDGTPHPKIAAIQERDRKNVYDLSVSTNLEE 295
BLAST of NO28G00990 vs. NCBI_GenBank
Match: GAX29422.1 (hypothetical protein FisN_16Hh137 [Fistulifera solaris]) HSP 1 Score: 295.0 bits (754), Expect = 3.900e-76 Identity = 149/301 (49.50%), Postives = 206/301 (68.44%), Query Frame = 0 Query: 67 SSPQSPFTADFAQQASLPS-PSPTPATAAYEVLFVRHGQSTWNRDNRFIGWTDVPLTEQGLEEAREAGRVLAREGVKVDEVHTSLLKRCIKTAWTILRELGQEYTPVHCHWRLNERSYGSLVGLEKKSTVARHGVETVRTWRRSFDVRPPPQRMDDKYWPGKDKKYKKLLASGTLPRIPAAECLKDVKERAAAHWEEVVVPAIKAGKRVVVVGHENNLRALFMHIDQVAPEDMLHVEIPRAAPLRYQFDAQMKPVRQA-----EPAPFLTGQFLISAENVAAVKERDSRQVYDLRITSNLE 362 S PQ+P Q+AS S TP Y++ F+RHGQSTWNRDNRFIGWTD PLT+ G+ EAR AG+++ G++ DEVHTSLL+R I+TA L ELGQEY PV+ HWRLNERSYG LVG KK V++ GV+ V+ WRRS+D PPP D Y+PGKD +Y+++L S IP +E L D +R++ +W+EV+ P+++ GK V++VGHENNLR+L M ++ + ED++++ +PRA PL Y+ D +KPV + E +L G++L + V + +RD +QVYD RIT+NLE Sbjct: 11 SLPQAPVAR--GQKASFTSLNQDTP----YQLCFLRHGQSTWNRDNRFIGWTDTPLTDDGVLEARVAGQMMFNAGIRFDEVHTSLLRRTIRTANLALMELGQEYLPVYKHWRLNERSYGDLVGKNKKEVVSQFGVDQVKRWRRSYDEPPPPMTRDHPYYPGKDPRYREMLNS-----IPESESLHDTMKRSSVYWDEVIAPSLRDGKTVLIVGHENNLRSLIMRLEDIGKEDIINLCLPRAVPLAYRLDENLKPVARQDGKLDEATGYLRGEWLGGDKAVRDILQRDRQQVYDTRITTNLE 300
BLAST of NO28G00990 vs. NCBI_GenBank
Match: GAX26301.1 (hypothetical protein FisN_16Lh137 [Fistulifera solaris]) HSP 1 Score: 294.7 bits (753), Expect = 5.100e-76 Identity = 138/272 (50.74%), Postives = 193/272 (70.96%), Query Frame = 0 Query: 95 YEVLFVRHGQSTWNRDNRFIGWTDVPLTEQGLEEAREAGRVLAREGVKVDEVHTSLLKRCIKTAWTILRELGQEYTPVHCHWRLNERSYGSLVGLEKKSTVARHGVETVRTWRRSFDVRPPPQRMDDKYWPGKDKKYKKLLASGTLPRIPAAECLKDVKERAAAHWEEVVVPAIKAGKRVVVVGHENNLRALFMHIDQVAPEDMLHVEIPRAAPLRYQFDAQMKPVRQA-----EPAPFLTGQFLISAENVAAVKERDSRQVYDLRITSNLE 362 Y++ F+RHGQSTWNRDNRFIGWTD PLT+ G+ EAR AG+++ G++ DEVHTSLL+R I+TA L ELGQEY PV+ HWRLNERSYG LVG KK V++ GV+ V+ WRRS+D PPP D Y+PGKD +Y+++L S IP +E L D +R++ +W+EV+ P+++ GK V++VGHENNLR+L M ++ + ED++++ +PRA PL Y+ D +KPV + E +L G++L + V + +RD +QVYD IT+NLE Sbjct: 33 YQLCFLRHGQSTWNRDNRFIGWTDTPLTDDGVLEARVAGQMMFNAGIRFDEVHTSLLRRTIRTANLALMELGQEYLPVYKHWRLNERSYGDLVGKNKKEVVSQFGVDQVKRWRRSYDEPPPPMTRDHPYYPGKDPRYREMLNS-----IPESESLHDTMKRSSVYWDEVIAPSLRDGKTVLIVGHENNLRSLIMRLEDIGKEDIINLCLPRAVPLAYRLDENLKPVARKDGKLDEATGYLRGEWLGGDKAVRDILQRDRQQVYDTSITTNLE 299
BLAST of NO28G00990 vs. NCBI_GenBank
Match: XP_002178324.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49989.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 288.1 bits (736), Expect = 4.800e-74 Identity = 157/374 (41.98%), Postives = 225/374 (60.16%), Query Frame = 0 Query: 1 MSSVLLRTSVSTTALRASGFPSDCVGSLSPQALLAQPELNSRTTLAFSTRHHQPQQQTPIPLGSSPSSPQSPFTADFAQQASLPSPSPTPATAAYEVLFVRHGQSTWNRDNRFIGWTDVPLTEQGLEEAREAGRVLAREGVKVDEVHTSLLKRCIKTAWTILRELGQEYTPVHCHWRLNERSYGSLVGLEKKSTVARHGVETVRTWRRSFDVRPPPQRMDDKYWPGKDKKYKKLLASGTLPRIPAAECLKDVKERAAAHWEEVVVPAIKAGKRVVVVGHENNLRALFMHIDQVAPEDMLHVEIPRAAPLRYQFDAQMKPV-----RQAEPAPFLTGQFLISAENVAAVKERDSRQVYDLRITSNLEKGSGSRRW 370 +SS +V T R G + V + + + + N RT +T+ + +T G + P+ FT SL +P +++ F+RHGQSTWNRDN FIGWTD PLT+ G+ EAR AG++L + G++ DEVHTSLL+R I+T L ELGQEY PVH HWRLNER YG LVG KK V +HG + V+ WRRS+D PPP D Y P +D +Y+ + L +P +E LK+ ER++ +W+EV+ PA++ GK ++VVGHENNLR+L M ++ +APED++++ +PRA PL Y+ D +KP+ + E FL G +L + V+ + +RD +QVYD IT+NLE G +W Sbjct: 22 LSSRSFGATVDATHARMGGNFVNSVQACNNGKRVCWHQRNRRTFSVVATQRNGIGHRT--TQGEMEAVPRRHFT-------SLNQSTP------FQLCFLRHGQSTWNRDNIFIGWTDTPLTDDGVLEARVAGKMLHKSGIRFDEVHTSLLRRSIRTTNLALMELGQEYLPVHKHWRLNERCYGDLVGKNKKEVVMQHGADQVKRWRRSYDEPPPPMSDDHPYHPARDPRYQNI-----LDELPKSESLKNTVERSSLYWDEVLAPALREGKTLLVVGHENNLRSLLMRLEDIAPEDIINLSLPRAVPLAYRLDENLKPLPREDGKLDEATGFLKGTWLGGDQAVSEILDRDHKQVYDTAITTNLEIGQDREKW 375
BLAST of NO28G00990 vs. NCBI_GenBank
Match: XP_002289894.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED93431.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 261.2 bits (666), Expect = 6.300e-66 Identity = 119/226 (52.65%), Postives = 160/226 (70.80%), Query Frame = 0 Query: 95 YEVLFVRHGQSTWNRDNRFIGWTDVPLTEQGLEEAREAGRVLAREGVKVDEVHTSLLKRCIKTAWTILRELGQEYTPVHCHWRLNERSYGSLVGLEKKSTVARHGVETVRTWRRSFDVRPPPQRMDDKYWPGKDKKYKKLLASGTLPRIPAAECLKDVKERAAAHWEEVVVPAIKAGKRVVVVGHENNLRALFMHIDQVAPEDMLHVEIPRAAPLRYQFDAQMKPV 321 Y + FVRHGQSTWNRDNRFIGWTD PLTE G+ EAR AGR+L G+ DE HTSLL+R I+T +L E+GQEY PV HWRLNERSYG LVGL KK V + G E V WRRS+D PPP D + P +D +Y+ + L IP++E LK K R+ +W++V+ P++++GK V++VGHENNLR+L M ++ + P+D++++ +PRA PL Y+ D +KP+ Sbjct: 1 YNLCFVRHGQSTWNRDNRFIGWTDTPLTEDGVLEARVAGRMLRSSGMLFDEAHTSLLRRSIRTTNLVLMEMGQEYIPVQKHWRLNERSYGDLVGLNKKEIVKKFGKEQVLRWRRSYDEPPPPMNEDHDHHPKRDPRYRLM-----LDEIPSSESLKCTKARSKIYWDDVIAPSLRSGKTVLIVGHENNLRSLIMRLEGILPDDIINLNLPRAVPLAYRLDKDLKPL 221
BLAST of NO28G00990 vs. NCBI_GenBank
Match: EJK45011.1 (hypothetical protein THAOC_36404 [Thalassiosira oceanica]) HSP 1 Score: 255.8 bits (652), Expect = 2.600e-64 Identity = 132/308 (42.86%), Postives = 186/308 (60.39%), Query Frame = 0 Query: 95 YEVLFVRHGQSTWNRDNRFIGWTDVPLTEQGLEEAREAGRVLAREGVKVDEVHTSLLKRCIKTAWTILRELGQEY-----------------------TPVHCHWRLNERSYGSLVGLEKKSTVARHGVETVRTWRRSFDVRPPPQRMDDKYWPGKDKKYKKLLASGTLPRIPAAECLKDVKERAAAHWEEVVVPAIKAGKRVVVVGHENNLRALFMHIDQVAPEDMLHVEIPRAAPLRYQFDAQMKPVRQA-----EPAPFLTGQFLISAENVAAVKERDSRQVYDLRITSNLEKGSGS---RRWVE 372 Y V+FVRHGQSTWNRDNRFIGWTD PLT++G+ EAR AGR+L+ G+ D+ HTSLL+R I+T +L E+GQEY PV HWRLNERSYG LVG KK V + G + V+ WRRS+D ++ P +D +Y+ +L IP +E LK + R +W++V+ PA+++GK +++VGHENNLR++ M ++ ++ D++++ +PRA PL Y+ D +KP+ + E L+G +L ++V V ERD QVYD+ I NLEK S RRW E Sbjct: 26 YNVVFVRHGQSTWNRDNRFIGWTDTPLTDEGVLEARLAGRMLSSSGILFDKAHTSLLRRSIRTTNLVLMEMGQEYIPGLLSDEAIDWFEQTLTLAPPWRPVSKHWRLNERSYGDLVGKNKKEVVKQFGQDQVKIWRRSYDQPXXXXXXXHEHHPKRDARYRLMLDD-----IPKSESLKCTRNRTKIYWDDVLAPALRSGKTLLIVGHENNLRSIIMRLEGISETDIINLSLPRAIPLAYRLDKDLKPLTRTDGGKDEATGMLSGYWLGGDDSVREVLERDHAQVYDVSIERNLEKDSDRDKWRRWTE 328
BLAST of NO28G00990 vs. NCBI_GenBank
Match: XP_001747083.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ88007.1 predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 248.1 bits (632), Expect = 5.500e-62 Identity = 123/258 (47.67%), Postives = 165/258 (63.95%), Query Frame = 0 Query: 93 AAYEVLFVRHGQSTWNRDNRFIGWTDVPLTEQGLEEAREAGRVLAREGVKVDEVHTSLLKRCIKTAWTILRELGQEYTPVHCHWRLNERSYGSLVGLEKKSTVARHGVETVRTWRRSFDVRPPPQRMDDKYWPGKDKKYKKLLASGTLPRIPAAECLKDVKERAAAHWEEVVVPAIKAGKRVVVVGHENNLRALFMHIDQVAPEDMLHVEIPRAAPLRYQFDAQMKPVRQAEPAPFLTGQFLISAENVAAVKERDSRQ 351 A Y+V+FVRHGQS WN +N+F GW DVPL+EQG+ EA+EAG VL +G K DE TS+LKR IKT IL E QE+ PV +RLNER YG+L GL+KK TV +HG E V WRRS+D+ PP D Y P K AS ++PA E LK ER +W+EV+VP IKAGK+V++ H N++RA+ ++D ++ E + +++P PL Y+FD MKP++Q A L+G++LI E + A E Q Sbjct: 2 AKYQVVFVRHGQSQWNLENKFTGWVDVPLSEQGVIEAKEAGAVLKEQGFKFDEAFTSVLKRAIKTCNIILEESDQEFIPVVKDYRLNERMYGALAGLDKKETVEKHGAEQVHIWRRSYDIPPPACEKDHPYHPSK----SPWAASIPEDKLPATESLKLTLERVLPYWDEVIVPEIKAGKKVLIAAHGNSIRAILKYLDDISEEVIPALDVPTGVPLFYEFDENMKPIKQEGAAEHLSGRYLIDEETLKAKIEEVKNQ 255
BLAST of NO28G00990 vs. NCBI_GenBank
Match: SMB24026.1 (phosphoglyceromutase 1 [Sterolibacterium denitrificans]) HSP 1 Score: 241.9 bits (616), Expect = 4.000e-60 Identity = 112/227 (49.34%), Postives = 152/227 (66.96%), Query Frame = 0 Query: 95 YEVLFVRHGQSTWNRDNRFIGWTDVPLTEQGLEEAREAGRVLAREGVKVDEVHTSLLKRCIKTAWTILRELGQEYTPVHCHWRLNERSYGSLVGLEKKSTVARHGVETVRTWRRSFDVRPPPQRMDDKYWPGKDKKYKKLLASGTLPRIPAAECLKDVKERAAAHWEEVVVPAIKAGKRVVVVGHENNLRALFMHIDQVAPEDMLHVEIPRAAPLRYQFDAQMKPVR 322 ++++ +RHG+S WN++NRF GWTDV LTE+GL EA AGR+L +EG D +TS+LKR IKT WT+L E+ + + PVH WRLNER YG+L GL K T ARHG E V WRR++D+ PPP DD + +Y LA+G LPR ECLKD ER +W E + P +K+GK V++ H N+LRAL ++D V+ D++ + IP A PL Y+ DA +KP+R Sbjct: 2 HKIVLIRHGESIWNKENRFTGWTDVDLTEKGLAEASAAGRLLKQEGFAFDIAYTSVLKRAIKTLWTVLEEMDRMWIPVHHSWRLNERHYGALQGLNKAETAARHGEEQVLVWRRAYDIPPPPLDADDPRMEAGNPRYAD-LAAGELPR---TECLKDTVERFLPYWHETIAPTVKSGKNVIIAAHGNSLRALIKYLDDVSDADIVGLNIPTAQPLVYELDADLKPIR 224
BLAST of NO28G00990 vs. NCBI_GenBank
Match: KPJ78611.1 (phosphoglyceromutase [Deltaproteobacteria bacterium SG8_13]) HSP 1 Score: 239.2 bits (609), Expect = 2.600e-59 Identity = 109/226 (48.23%), Postives = 155/226 (68.58%), Query Frame = 0 Query: 96 EVLFVRHGQSTWNRDNRFIGWTDVPLTEQGLEEAREAGRVLAREGVKVDEVHTSLLKRCIKTAWTILRELGQEYTPVHCHWRLNERSYGSLVGLEKKSTVARHGVETVRTWRRSFDVRPPPQRMDDKYWPGKDKKYKKLLASGTLPRIPAAECLKDVKERAAAHWEEVVVPAIKAGKRVVVVGHENNLRALFMHIDQVAPEDMLHVEIPRAAPLRYQFDAQMKPVR 322 +++ +RHG+S WN++NRF GWTDV LT +G++EA EAGR L EG + D +TS+LKR IKT W +L E+ + PV+ +WRLNER YG+L GL+K T ARHG++ V WRRS+DVRPP DD+ +P KD +Y LL ++P ECL+D ER +W+EVV PA++ G RV++V H N+LRAL ++D V+ E++L + IP PL Y+ ++P+R Sbjct: 3 KLVLLRHGESVWNKENRFTGWTDVELTPKGVQEAIEAGRTLRNEGYRFDAAYTSVLKRAIKTLWLVLEEMELMWIPVYRNWRLNERHYGALQGLDKAETAARHGMDQVHIWRRSYDVRPPALTADDERYPAKDPRYADLLPG----QVPLTECLQDTVERFLPYWQEVVEPAVRKGTRVLMVAHGNSLRALVKYLDGVSDEEILGINIPTGIPLVYELADDLRPIR 224
BLAST of NO28G00990 vs. NCBI_GenBank
Match: WP_028321323.1 (2,3-diphosphoglycerate-dependent phosphoglycerate mutase [Desulfatiglans anilini]) HSP 1 Score: 238.8 bits (608), Expect = 3.300e-59 Identity = 105/226 (46.46%), Postives = 151/226 (66.81%), Query Frame = 0 Query: 95 YEVLFVRHGQSTWNRDNRFIGWTDVPLTEQGLEEAREAGRVLAREGVKVDEVHTSLLKRCIKTAWTILRELGQEYTPVHCHWRLNERSYGSLVGLEKKSTVARHGVETVRTWRRSFDVRPPPQRMDDKYWPGKDKKYKKLLASGTLPRIPAAECLKDVKERAAAHWEEVVVPAIKAGKRVVVVGHENNLRALFMHIDQVAPEDMLHVEIPRAAPLRYQFDAQMKPV 321 Y ++ +RHG+S WN++NRF GW DV L+E+G+EEA EAGR+L REG D +TS+LKR I+T W L E+ + P+ +WRLNER YG+L GL K T RHG E V WRR++D+ PPP +DD +PG D +Y+ + ++P +ECLKD R +W +V+VP I+ GKRV++ H N+LRAL ++D ++ +D++ + IP PL Y+ D QMKP+ Sbjct: 2 YTIVLLRHGESLWNKENRFTGWVDVDLSEKGMEEAHEAGRILHREGFSFDFAYTSVLKRAIRTLWITLDEMDLMWIPIRQNWRLNERHYGALQGLNKAETAERHGEEQVLIWRRAYDIAPPPLSLDDPMYPGSDPRYRDV----DTAKLPLSECLKDTVNRFIPYWSDVIVPTIREGKRVIIAAHGNSLRALVKYLDNISEKDIVGMNIPTGIPLVYKLDRQMKPL 223 The following BLAST results are available for this feature:
BLAST of NO28G00990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00990 ID=NO28G00990|Name=NO28G00990|organism=Nannochloropsis oceanica|type=gene|length=2404bpback to top protein sequence of NO28G00990.1 >NO28G00990.1-protein ID=NO28G00990.1-protein|Name=NO28G00990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=464bpback to top Synonyms
Publications
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