NO28G00920, NO28G00920 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G00920 vs. NCBI_GenBank
Match: EWM20901.1 (Bulb-type lectin domain protein [Nannochloropsis gaditana]) HSP 1 Score: 645.2 bits (1663), Expect = 1.600e-181 Identity = 321/465 (69.03%), Postives = 375/465 (80.65%), Query Frame = 0 Query: 2 KATTASDLMATGLDAMRKFLLMQYPYEFEICLFAFCLGASMRVRPSAQHSWLHHLVLVFLTGFAGGTIIPMFFGRTPVIFVNDVLVPLVCLSWYLVHFTCAGPLLQSSPLKFVLVCLFEIYRAASIIKTVGQVAADIPPGPYYPIPLVGPVLVGTLSGSMGAFMPPDRGISFLASGVPLNLQTTILACTFFHFAAHDPHLVGAYLRGLPGLRLNEPENLKALTVFFFVAMAFISLIKGPDYNPFAPFHRTLYQLLGIPLSPATEERLXXXXXXXXXXXXXXXXXXXXXXKDKSHLLQGSKILVPILAILAYQFAGTGKIFPRTSLPVGGRLNPGDYLSACGLAKTYAGQCTQQHFLTLDADGRLSLYKGTSPKDTGSQRVWQSKNTKKAGKLSDAGIFAELRPEGVLVLKHTGDGENVYWSSPAMKK--KQKGKEGGRKVRVQVMERGAFGVFEGEKALWTSDGL 465 K ASDL+ T + RKFLLMQYPYEFE+CLFAFCLGASMRVRPSAQ+SWLHHLVLVFLTGFAGGTIIPMFFGRTPV+FVND+LVPLVCLSWYLVH+T G LLQ+SP KF+LV LFEIYRAASI+KTVGQ DI PGPYYPI +VGPVLVGTLSGSMGAFMPPDRGISFLA+GVPLNLQTT+LAC F+H AAHDP L GAYLRGLP LRL++PENLKALTVFFFVAMAF+SL+KGPDYNPF P H LYQ+LGIP SPAT ERL K LL SK+LVP+LA+LAYQ GK+ PRT+LPVGGRL+PG+Y++ACG +++ G C +QHFLTLDA+GRLSLY+G SPKD GS R+WQSK T+++GK ++AG+FAEL GVLVLKHT G+ YW+S + K ++KG++ GR + ++V+ERGAFG+FEG LWTSDG+ Sbjct: 3 KMIPASDLVTTLFEVARKFLLMQYPYEFEVCLFAFCLGASMRVRPSAQYSWLHHLVLVFLTGFAGGTIIPMFFGRTPVLFVNDLLVPLVCLSWYLVHYTRVGGLLQTSPCKFLLVALFEIYRAASILKTVGQATTDIAPGPYYPIAVVGPVLVGTLSGSMGAFMPPDRGISFLATGVPLNLQTTLLACLFYHLAAHDPALPGAYLRGLPALRLSDPENLKALTVFFFVAMAFLSLVKGPDYNPFTPVHTLLYQVLGIPHSPATLERL----KSTRRAPNAGDHGPKPAVKASGRLLGASKVLVPLLAMLAYQL--QGKLAPRTTLPVGGRLHPGEYIAACGPLQSFTGHC-KQHFLTLDAEGRLSLYRGASPKDAGSHRLWQSKATRRSGKPTEAGLFAELNEGGVLVLKHTAGGDATYWTSSSRKTEGEKKGQDAGR-LHLRVLERGAFGIFEGSTPLWTSDGI 459
BLAST of NO28G00920 vs. NCBI_GenBank
Match: CBJ33404.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 141.0 bits (354), Expect = 9.600e-30 Identity = 89/278 (32.01%), Postives = 133/278 (47.84%), Query Frame = 0 Query: 20 FLLMQYPYEFEICLFAFCLGASMRVRPSA---------------------------------QHSWLHHLVLVFLTGFAGGTIIPMFFGRTPVIFVNDVLVPLVCLSWYLVHFTCAGP---LLQSSPLKFVLVCLFEIYRAASIIKTVGQVAADIPPGPYYPIPLVGPVLVGTLSGSMGAFMPPDRGISFLASGVPLNLQTTILACTFFHFAAHDPHLVGAYLRGLPGLRLNEPENL--KALTVFFFVAMAFISLIKGPDYNPFAPFHRTLYQLLGIP 260 FL + Y E+CL AF L S R A Q W LV+ ++ F GG + P G+ PV+FVND++VPLV + W+ V GP L+ + +K V++ L E++RA S+ V + + PG +YPI L GP+L+GT+ G G F+P D+G+ L +G P LQ+ FF+ +DP+ VG YLR L L+ + +A+ F +A + P +NPF P H +Y + G+P Sbjct: 7 FLTQNWEYGAEVCLAAFALFHSAREIKQACDALRLACAGSGALTFKQKAKILVRKIEKDSGKQMFWAESLVMTYMMAFGGGILAPFLLGKPPVMFVNDLIVPLVAVCWF-VSNRAEGPIFALINTPIMKQVILVLSEVFRANSMCGIVVLSNSILKPGKHYPIALWGPILLGTVGGCGGLFLPLDKGLKGLKNGAPWPLQSAFYGSMFFNLFVYDPN-VGPYLRDAAALFLDGDLVVQGRAIVAGFLCVVALAQTLISPAFNPFTPVHNVVYTVTGVP 282
BLAST of NO28G00920 vs. NCBI_GenBank
Match: CBJ25916.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 114.0 bits (284), Expect = 1.300e-21 Identity = 117/412 (28.40%), Postives = 175/412 (42.48%), Query Frame = 0 Query: 76 RTPVIFVNDVLVPLVCLSWYLVHFTCAGP----LLQSSPLKFVLVCLFEIYRAASIIKTVGQVAADIPPGPYYPIPLVGPVLVGTLSGSMGAFMPPDRGISFLASGVPLNLQTTILACTFFHFAAHDPHLVGAYLRGLPGLRLNEPENLKALTVFFFVAMAFISLIKGPDYNPFAPFHRTLYQLLGIPLSPATEE--------------------RLXXXXXXXXXXXXXXXXXXXXXXKDKSHLLQGSKILVPILAILA-YQFAGTGKIFPRTSLPVGGRLNPGDYLSACG-LAKTYAGQCTQQHFLTLDADGRLSLYKGTSPKDTGSQRVWQSKNTKKAGKLSDAGIFAELRPEGVLVLKHTGDGENVYWSSPAMKKKQKGKEGGRKVRVQVMERGAFGVFEGEKALWTS 462 R P +F+N+ L+ + C+ + + P +++ L + L R I V PP PYYPI L GP+++G G G+ +P D+G+S ++ +P +Q TF+H A+D +++G +RG GL E+++ + V F V + I P +NPF P H+ LY + G+P + T E XXXXXXXXXXXXX K +S L + V +A+LA Y I P + G G L++C L K + CT + +TGS V++ K A+ + EG DG V WSSPA KK E V++ + E G V G+K LW+S Sbjct: 2 RDPPLFLNNDLL-VTCIMVFFLFSVVFDPYVVNFIKTPHLWKAMALLSTTSRMNKICFIVDYALTKFPPSPYYPIALFGPIMIGLARGIGGSLVPADKGLSSISKDLPWAVQLCFSVATFYHVVANDTYILGGMVRGALGLENATREDIRLIAVTFGVVVTVIQTYYAPKFNPFTPAHQALYTVTGMPKTAITIEVPRSTPSTDADKAKDNXXXXXXXXXXXXXXXXXXXGLYDLKTRKKIQSFLEALKPVGVAAVAVLALYSRQPPSTIIPGVVVKAG-----GSGLASCAFLPKVLSNGCTPLR---------------AAVTETGSLVVYRGKEVPVLPA-------AKKKVEG-------DDGPEVLWSSPAPKKLAAEDE----VQLDLSEDGILSVMAGDKKLWSS 374
BLAST of NO28G00920 vs. NCBI_GenBank
Match: GAX25268.1 (hypothetical protein FisN_5Lh352 [Fistulifera solaris]) HSP 1 Score: 99.0 bits (245), Expect = 4.200e-17 Identity = 70/252 (27.78%), Postives = 120/252 (47.62%), Query Frame = 0 Query: 14 LDAMRKFLLMQYPYEFEICLFAFCLGASMRVRPSAQHS----WLHHLVLVFLTGFAGGTIIPMFFGRTPVIFVNDVLVPLVCLSWYLVHFT---CAGPLLQSSPLKFVLVCLFEIYRAASIIKTVGQV--AADIPPGPYYPIPLVGPVLVGTLSGSMGAFMPPDRGI-SFLASGVPLNLQTTILACTFFHFAAHDPH-LVGAYLR-GLPGLR--LNEPENLKALTVFFFVAMAFISL--IKGPDYNPFAPFH 250 +D++ +F +PY E +M VR + W H VL + F GG + ++ G+ + NDV ++ +V++T + ++ P+ V+ +++RA+ I+K V A P PYYPIP+ GP+L GTL G+M F+ +G+ ++ G+P +Q + TF+HF HD VG +LR +P + L + E + +F + + L GP ++PF FH Sbjct: 1 MDSIVQFATYSFPYAAEFQAIGMAFQGAMAVRSGPNKNGTLHWFHAFVLSVMAAFTGGWLGFIWMGKPSSMLSNDVNFASCIFAFVVVNYTPGDIGYMICRTLPVTLVITSSAQLFRASGIMKFVAACYDAFKDNPSPYYPIPVFGPILYGTLLGNMAGFLM--KGLEGHVSKGMPWPVQNGLFCATFYHFFVHDSSGPVGTFLRTSIPARQFGLKDVEFASCVVTYFMQLVGILQLPEFLGPSWSPFNLFH 250
BLAST of NO28G00920 vs. NCBI_GenBank
Match: GAX16973.1 (hypothetical protein FisN_5Hh352 [Fistulifera solaris]) HSP 1 Score: 97.1 bits (240), Expect = 1.600e-16 Identity = 70/251 (27.89%), Postives = 121/251 (48.21%), Query Frame = 0 Query: 14 LDAMRKFLLMQYPYEFEICLFAFCLGASMRVRPSAQHS----WLHHLVLVFLTGFAGGTIIPMFFGRTPVIFVNDVLVPLVCLSWYLVHFT---CAGPLLQSSPLKFVLVCLFEIYRAASIIKTVGQV--AADIPPGPYYPIPLVGPVLVGTLSGSMGAFMPPDRGI-SFLASGVPLNLQTTILACTFFHFAAHDPH-LVGAYLR-GLPG--LRLNEPENLKALTVFFFVAMAFISL--IKGPDYNPFAPF 249 +D++ +F +PY E +M VR + W H VL + F GG + ++ G+ + NDV ++ +V++T + ++ P+ V+ +++RA+ I+K V A P PYYPIP+ GP+L GTL G+M F+ +G+ ++SG+P +Q + TF+HF HD + VG +LR +P L + E + +F + + L GP+++PF F Sbjct: 1 MDSIVQFATYSFPYAAEFQAIGMAFQGAMAVRSGPNKNGTLHWFHAFVLSVMAAFTGGWLGFIWMGKPSSMLSNDVNFASCIFAFVVVNYTPGDIGYMICRTLPVTLVITSSSQLFRASGIMKFVAACYDAFKDNPSPYYPIPVFGPILYGTLLGNMAGFLM--KGLEGHVSSGMPWPVQNGLFCATFYHFFVHDLNGPVGTFLRTSIPAGQFGLKDREFASCVVTYFMQIVGILQLPEFLGPNWSPFNLF 249
BLAST of NO28G00920 vs. NCBI_GenBank
Match: OEU09611.1 (hypothetical protein FRACYDRAFT_212285 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 82.8 bits (203), Expect = 3.100e-12 Identity = 67/247 (27.13%), Postives = 119/247 (48.18%), Query Frame = 0 Query: 14 LDAMRKFLLMQYPYEFEICLFAFCLGASMRVR----PSAQHSWLHHLVLVFLTGFAGGTIIPMFFGR-TPVIFVNDVLVPLVCLSWYLVHFT---CAGPLLQSSPLKFVLVCLFEIYRAASIIKTVGQVAADIPPGPYYPIPLVGPVLVGTLSGSMGAFMPPDRGIS-FLASGVPLNLQTTILACTFFHFAAHDPH-LVGAYLRGL---PGLRLNEPENLKA-LTVFFFVAMAFISLIK---GPDYN 244 ++++ L PY E+ F +M VR + + +W H L + GF GG ++ G+ T +I D+ + L +++ + +T L S P+K V+ C +++RA +I + AA++ P YYP ++GPV+ GTL G+MG+F +G + L +P Q ++ F+H HD + +G LR G++ + + L A L V F+ + + ++ GP YN Sbjct: 2 IESIVNILTGSSPYNVELRTFGQAFMGAMAVRSGKNKNKEMNWFHAFALSTIVGFGGGWFGFVWMGKPTSLITNGDITLTLTAIAFVISTYTPMDIGYKLGSSLPVKIVMNCWAQLFRALGMIGFINACAAEVGPSKYYPTAILGPVVYGTLLGNMGSFFL--KGFNQHLEKAIPWPFQNGLVMGFFYHVYTHDINGSMGITLRSAVQSTGIQGSMDDKLFAILVVTSFMQVTGVLMLPEFFGPTYN 246
BLAST of NO28G00920 vs. NCBI_GenBank
Match: XP_005769635.1 (hypothetical protein EMIHUDRAFT_470318 [Emiliania huxleyi CCMP1516] >EOD17206.1 hypothetical protein EMIHUDRAFT_470318 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 82.4 bits (202), Expect = 4.100e-12 Identity = 61/241 (25.31%), Postives = 105/241 (43.57%), Query Frame = 0 Query: 2 KATTASDLMATGLDAMRKFLLMQ--YPYEFEICLFAFCLGASMRVRPSAQH-SWLHHLVLVFLTGFAGGTIIPMFFGRTPVIFVNDVLVPLVCLSWYLVHFTCAGPLLQSSPL-KFVLVCLFEIYRAASIIKTVGQVAADIPPGPYYPI------PLVGPVLVGTLSGSMGAFMPPDRGISFL-ASGVPLNLQTTILACTFFHFAAHDPHLVGAYLRGLPGLRLNEPENLKALTVFFFVAM 232 KA T L+ +R LL Q Y + + I L +C ++ + +W + + L LT F GG ++P+ G +N+ L+P + ++W V + L SP + FE++R + + +PP P+ LVGP+L G + G GAFMP G+ L S +P +Q++ + + H HD + + +P L +P +K + FF + Sbjct: 3 KAPVPLPAAPTPLEVLRDVLLFQGDYAFAYYIFLALYCAACCRNLKEALPRLTWFYAIPLAVLTSFGGGIMVPVLLGLPAAPLINEALIPTMIIAWACVQYLHPVLALLQSPFGRAASNSGFEVFRYHVLAICSDLASKTLPPVSTGPLAGTLSCALVGPLLCGMIGGCGGAFMPLSNGLKALEGSTIPWRVQSSAVMSAWHHLLTHDAAVRASAAEYVPFLA--DPAMVKLCGILFFAGL 241
BLAST of NO28G00920 vs. NCBI_GenBank
Match: XP_002294605.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED87965.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 79.7 bits (195), Expect = 2.600e-11 Identity = 59/207 (28.50%), Postives = 91/207 (43.96%), Query Frame = 0 Query: 14 LDAMRKFLLMQYPYEFEICLFAFCLGASMRVR--PSAQHS--WLHHLVLVFLTGFAGGTIIPMFFGRTPVIFVNDVLVPLVCLSWYLVHF---TCAGPLLQSSPLKFVLVCLFEIYRAASI--IKTVGQVAADIPPGPYYPIPLVGPVLVGTLSGSMGAFMPPDRGI-SFLASGVPLNLQTTILACTFFHFAAHDPH-LVGAYLRGL 210 L+ + + + M +PY E + + SM VR P+ S W H LT +AG T +F GR +F ND+ L + V+F L + +F+ +I+R + P PYYP P+ GP+L ++ G+MG F G ++L G+P Q + F+HF AHD +G LRG+ Sbjct: 2 LNPLVRLITMDFPYATETVCYFMAVQGSMAVRNGPNKHKSMHWFHAFFKSTLTAYAGATFTNIFMGRPTAMFANDIFFGACILGFVTVNFLPMDVGYHLFNTFIGEFLATVFSQIFRVGGVTGFSDAAYGMFKDSPSPYYPTPVFGPILFPSVLGNMGGFF--FNGFDAYLEKGMPWLFQQGLSCSMFYHFYAHDSEGAIGQTLRGI 206
BLAST of NO28G00920 vs. NCBI_GenBank
Match: XP_002178767.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49465.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 75.5 bits (184), Expect = 5.000e-10 Identity = 66/258 (25.58%), Postives = 116/258 (44.96%), Query Frame = 0 Query: 9 LMATGLDAMRKFLLMQYPYEFEICLFAFCLGASMRVR--PSAQHS--WLHHLVLVFLTGFAGGTIIPMFFGRTPVIFVNDVLVPLVCLSWYLVHFT-------CAGPLLQSSPLKFVLVCLFEIYRAASIIKTVGQVAADI--PPGPYYPIPLVGPVLVGTLSGSMGAFMPPDRGISFLASGVPLNLQTTILACTFFHFAAHD-PHLVGAYLR------GLPGLRLNEPENLKALTVFFFV-AMAFISLIKGPDYNPF 246 + + ++ + +F + + E+ F + +M VR P+ S W H L + GF GG + ++ GR + ND+ + +++ LV++T C ++ K V +++R+ + K V P YYPIP+ GP+L TL G+MG F+ F A+G+P +Q + TF+HF +D +G +LR G + N+ L +T+F V + + GP + PF Sbjct: 1 MSSLAMELLVQFSSGDFAFSGELQAFWMAVQGAMMVRLGPNKDRSLNWFHAFSLSVIGGFGGGWLGFIWMGRPSSMLSNDLNMASCIVAFILVNYTPMDIGFKCCNNIMG----KIATVVFAQLFRSLGVAKFVMVCFETFKDSPSAYYPIPVFGPILYATLLGNMGGFVLKGFNGHF-ANGMPWPVQNGLFCATFYHFYVNDQTGPIGIFLRKSLRMAHFLGFKDNQTFALVVVTMFMQVMGILQMPTFLGPSFTPF 253
BLAST of NO28G00920 vs. NCBI_GenBank
Match: XP_002287366.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94809.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 68.6 bits (166), Expect = 6.100e-8 Identity = 46/180 (25.56%), Postives = 86/180 (47.78%), Query Frame = 0 Query: 19 KFLLMQYPYEFEICL--FAFCLGASMRVRPSAQHSWLHHLVLVFLTGFAGGTIIPMFFGRTPVIFVNDVLVPLVCLSWYLVH--FTCAGPLLQSSPL-KFVLVCLFEIYRAASIIKTVGQVAADIPPGPYYPIPLVGPVLVGTLSGSMGAFMPPDRGISFLASGVPLNLQTTILACTFFH 194 +FL + +C+ + F G+ + + S+ + LV + L GG ++P+F PV ND P+ L + +H F +++ SP+ + ++E RA ++ +A I P + PL GP++ GT++G GAF+P +G+S + +G+ + T + T H Sbjct: 23 QFLTLHQKEVLYMCMLGYTFMHGSKVFAAAPKEASFSYKLVSMILACTGGGILVPIFLNGIPVPLANDA-YPIAILLSFAIHYYFPIVREVVKLSPIVNSCFIIMYEAVRAKVVLTFTVAASAAIAPST-FSFPLFGPIMCGTIAGCGGAFLPMSKGLSPIENGMQYPMITAFIGATLAH 200 The following BLAST results are available for this feature:
BLAST of NO28G00920 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 11
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00920 ID=NO28G00920|Name=NO28G00920|organism=Nannochloropsis oceanica|type=gene|length=2076bpback to top protein sequence of NO28G00920.1 >NO28G00920.1-protein ID=NO28G00920.1-protein|Name=NO28G00920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=469bpback to top Synonyms
Publications
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