NO28G00910, NO28G00910 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G00910 vs. NCBI_GenBank
Match: XP_005854666.1 (atp binding protein [Nannochloropsis gaditana CCMP526] >EKU21693.1 atp binding protein [Nannochloropsis gaditana CCMP526] >EWM20903.1 hypothetical protein Naga_100156g11 [Nannochloropsis gaditana]) HSP 1 Score: 326.6 bits (836), Expect = 7.000e-86 Identity = 158/231 (68.40%), Postives = 181/231 (78.35%), Query Frame = 0
Query: 21 QKQQVLLSFSGGKDSSMALHVLLQDPSYDVVGLLISVRQDTDRVSVHEVRRELLDAQVAALPGNLAVFEVALPPTSTNAEYEGALFAALDAARCRFPQLAILAFGDLFLQDVRDYRVGMLARWSGDDGRPLMPLFPIWGRDTTALAQDVIKLGFRSHLVCVDTTQLGARFSGRQFDAALLDELPESVDPCGENGEFHTFVSDGPVFSKPVPVCGGEVALQGPGNRFAFCDL 252
Q QVLLSFSGGKDSSMALHVL DP++ VVG+++ V +D DRVSVHEVRRELLDAQVAALP +L VF V LP STN +YEGA+F AR FP L +AFGD+FL DVRDYR+G+LARWSG G PL+PLFP+WGRDTT LA+D + LGFR+HLVCVDTTQL A + GRQ+DAALLD+LP VD CGE GEFHTFVS GPVFS VPV G V +G RFA+CDL
Sbjct: 19 QPSQVLLSFSGGKDSSMALHVLRNDPNFHVVGIMVQVEKDNDRVSVHEVRRELLDAQVAALPSDLTVFHVCLPVMSTNCQYEGAIFDCFAEARQCFPLLKYVAFGDIFLADVRDYRMGVLARWSGHGGCPLLPLFPLWGRDTTRLARDFLALGFRAHLVCVDTTQLDATYVGRQYDAALLDDLPAHVDLCGEKGEFHTFVSAGPVFSSTVPVQVGHVESRGTAGRFAYCDL 249
BLAST of NO28G00910 vs. NCBI_GenBank
Match: AMY09093.1 (hypothetical protein LuPra_02304 [Luteitalea pratensis]) HSP 1 Score: 230.3 bits (586), Expect = 6.800e-57 Identity = 119/230 (51.74%), Postives = 152/230 (66.09%), Query Frame = 0
Query: 22 KQQVLLSFSGGKDSSMALHVLLQDPSYDVVGLLISVRQDTDRVSVHEVRRELLDAQVAALPGNLAVFEVALPPTSTNAEYEGALFAALDAARCRFPQLAILAFGDLFLQDVRDYRVGMLARWSGDDGRPLMPLFPIWGRDTTALAQDVIKLGFRSHLVCVDTTQLGARFSGRQFDAALLDELPESVDPCGENGEFHTFVSDGPVFSKPVPVCGGEVALQGPGNRFAFCDL 252
++ V LS+SGGKDS++AL L +DP +VV L+ SV ++ DR+S+H VRR LL+AQVA+ L + EV L P +N YE A F A+ P + LAFGDLFL+DVR YR +L R L FP+WGR+T LA D + GF +HL CVDTTQL ARF+GR FD L+ ELP VDPCGE GEFHTFVS GP+FS+P+ V G+V L+ RFA+CD+
Sbjct: 5 REPVALSWSGGKDSALALAALREDPRLEVVALMTSVTREYDRISIHGVRRVLLEAQVAS--AGLPLIEVTLEPQCSNEAYEAAFFDAVARMGVGHPGVETLAFGDLFLEDVRAYREALLRR------AGLTGCFPLWGRETRQLAHDFVARGFVAHLACVDTTQLAARFAGRVFDDGLIAELPAGVDPCGERGEFHTFVSAGPIFSQPIAVSCGDVVLR--DGRFAYCDI 224
BLAST of NO28G00910 vs. NCBI_GenBank
Match: OLC68309.1 (hypothetical protein AUH78_26265 [Gemmatimonadetes bacterium 13_1_40CM_4_69_8] >OLD32808.1 hypothetical protein AUI49_01975 [Candidatus Rokubacteria bacterium 13_1_40CM_2_68_13]) HSP 1 Score: 214.2 bits (544), Expect = 5.100e-52 Identity = 112/229 (48.91%), Postives = 150/229 (65.50%), Query Frame = 0
Query: 23 QQVLLSFSGGKDSSMALHVLLQDPSYDVVGLLISVRQDTDRVSVHEVRRELLDAQVAALPGNLAVFEVALPPTSTNAEYEGALFAALDAARCRFPQLAILAFGDLFLQDVRDYRVGMLARWSGDDGRPLMPLFPIWGRDTTALAQDVIKLGFRSHLVCVDTTQLGARFSGRQFDAALLDELPESVDPCGENGEFHTFVSDGPVFSKPVPVCGGEVALQGPGNRFAFCDL 252
Q VL+++SGGKDS++AL +L+D Y VV L+ +V + DR+S+H VRR LL Q L L + EV +P ++NA+YE + A L AAR RF L + FGDLFL D+R YR +LAR + LFP+W RDT ALA D ++ G+++ LVCVD+ L F+GR++DA LL+ELP VDPCGENGEFHTFV GP+ PVP GE+ ++ RF +CDL
Sbjct: 17 QPVLVAWSGGKDSALALQEVLRDERYRVVALVTTVTAEYDRISMHGVRRGLLHRQAQTL--GLPLQEVVIPRDASNADYERQMEATLTAARTRFAMLDAVVFGDLFLADIRAYRERLLARIG------MRGLFPLWLRDTRALAADCVRQGYKAVLVCVDSRALPRAFAGREYDAPLLNELPPGVDPCGENGEFHTFVYAGPILRAPVPYRRGEIVVR--EGRFVYCDL 235
BLAST of NO28G00910 vs. NCBI_GenBank
Match: OGW68743.1 (ATP-binding protein [Nitrospirae bacterium RIFCSPLOWO2_01_FULL_62_17]) HSP 1 Score: 212.2 bits (539), Expect = 1.900e-51 Identity = 111/227 (48.90%), Postives = 147/227 (64.76%), Query Frame = 0
Query: 27 LSFSGGKDSSMALHVLLQDPSYDVVGLLISVRQDTDRVSVHEVRRELLDAQVAALPGNLAVFEVALPPTSTNAEYEGALFAALDAARCRFPQLAILAFGDLFLQDVRDYRVGMLARWSGDDGRPLMPLFPIWGRDTTALAQDVIKLGFRSHLVCVDTTQLGARFSGRQFDAALLDELPESVDPCGENGEFHTFVSDGPVFSKPVPVCGGEVALQGPGNRFAFCDLRL 254
LS+S GKDS+ ALH+L + VVGLL ++ ++ RV++H VR ELLDAQ AA L + ++ LP +NA YE A+ A+ AR R + +AFGDLFLQDVR YR MLA G + P+FP+WG+ T LA ++ G R+HL CVD QL F+GR FDA LL++LP+SVDPCGE GEFHTF GP+F +P+P+ G+V + + F F DLRL
Sbjct: 13 LSWSSGKDSAWALHMLRTSGTVQVVGLLTTLNREAGRVAMHAVREELLDAQAAA--AGLPLIKIFLPHPCSNAAYEDAMRGAI--ARARADGITHMAFGDLFLQDVRRYRETMLA------GIGIQPIFPLWGQPTGQLADRMVAAGLRAHLTCVDPKQLSPAFAGRTFDARLLEDLPDSVDPCGERGEFHTFAHAGPMFEEPIPIMPGDVITR---DGFVFADLRL 226
BLAST of NO28G00910 vs. NCBI_GenBank
Match: WP_079724328.1 (ATP-binding protein [Pseudoxanthomonas indica] >SKC67860.1 MJ0570-related uncharacterized domain-containing protein [Pseudoxanthomonas indica]) HSP 1 Score: 209.5 bits (532), Expect = 1.200e-50 Identity = 114/229 (49.78%), Postives = 148/229 (64.63%), Query Frame = 0
Query: 25 VLLSFSGGKDSSMALHVLLQDPSYDVVGLLISVRQDTDRVSVHEVRRELLDAQVAALPGNLAVFEVALPPTSTNAEYEGALFAALDAARCRFPQLAILAFGDLFLQDVRDYRVGMLARWSGDDGRPLMPLFPIWGRDTTALAQDVIKLGFRSHLVCVDTTQLGARFSGRQFDAALLDELPESVDPCGENGEFHTFVSDGPVFSKPVPVCGGEVALQGPGNRFAFCDLRL 254
VLL++SGGKD++ LHVL Q +VVGLL ++ ++ DR+S+ +RRE+L AQ A L V E +P N +YE A+ AL A R+P L +AFGDL LQD+RDYR LAR D + P++G DT AL++ +I G R+ L CVDT QL ARF+GR FDAALL ELP++VD CGENGEFHT VS GP+F+ P+ V GE L+ RFA+ D L
Sbjct: 7 VLLAWSGGKDAAWTLHVLRQRDDVEVVGLLSTITREYDRISMQGIRREILHAQARA--AGLPVIEAMIPARCINDDYEQAMAQALAEASARWPDLRTMAFGDLLLQDIRDYRQQNLARVGWD------LVTPLFGSDTPALSRQMIAGGLRAQLCCVDTQQLDARFAGRDFDAALLAELPQAVDACGENGEFHTCVSAGPMFTAPLDVRRGETILR--DERFAYTDFLL 225
BLAST of NO28G00910 vs. NCBI_GenBank
Match: OLC30981.1 (hypothetical protein AUH81_18765 [Candidatus Rokubacteria bacterium 13_1_40CM_4_69_5]) HSP 1 Score: 208.8 bits (530), Expect = 2.100e-50 Identity = 109/229 (47.60%), Postives = 148/229 (64.63%), Query Frame = 0
Query: 23 QQVLLSFSGGKDSSMALHVLLQDPSYDVVGLLISVRQDTDRVSVHEVRRELLDAQVAALPGNLAVFEVALPPTSTNAEYEGALFAALDAARCRFPQLAILAFGDLFLQDVRDYRVGMLARWSGDDGRPLMPLFPIWGRDTTALAQDVIKLGFRSHLVCVDTTQLGARFSGRQFDAALLDELPESVDPCGENGEFHTFVSDGPVFSKPVPVCGGEVALQGPGNRFAFCDL 252
+ VL+++SGGKDS++AL +L+D Y V L+ +V +R+S+H VRR LL Q +L L + EV + P ++N EYE + A L AAR +F L + FGDLFL D+R YR MLAR + LFP+W RDT ALA D ++ G+++ L CVD+ L A F+GR+FDAALL +LP +DPCGENGEFHTFV GP+ PVP GE+ ++ RF +CDL
Sbjct: 3 EPVLMAWSGGKDSALALQQVLRDERYRVAALVTTVTTGYERISMHGVRRSLLHRQARSL--GLRLEEVLISPHASNEEYERQMEATLTAARAQFAGLDAVVFGDLFLADIRAYRERMLARIG------MRGLFPLWLRDTRALAADFVRQGYKAVLACVDSRALPAGFAGREFDAALLGDLPSGIDPCGENGEFHTFVYAGPILHTPVPHRRGEIVVR--EGRFVYCDL 221
BLAST of NO28G00910 vs. NCBI_GenBank
Match: OGX41226.1 (ATP-binding protein [Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_68_15]) HSP 1 Score: 208.0 bits (528), Expect = 3.600e-50 Identity = 112/229 (48.91%), Postives = 147/229 (64.19%), Query Frame = 0
Query: 23 QQVLLSFSGGKDSSMALHVLLQDPSYDVVGLLISVRQDTDRVSVHEVRRELLDAQVAALPGNLAVFEVALPPTSTNAEYEGALFAALDAARCRFPQLAILAFGDLFLQDVRDYRVGMLARWSGDDGRPLMPLFPIWGRDTTALAQDVIKLGFRSHLVCVDTTQLGARFSGRQFDAALLDELPESVDPCGENGEFHTFVSDGPVFSKPVPVCGGEVALQGPGNRFAFCDL 252
+ VL+++SGGKDS+MAL +LQDP+ V LL +V + +R+S+H VRR LL Q AAL +L + EV +PPT NA+YE + A L R + ++ + FGDLFL++VR YR L R + LFP+WGR T LA+ I GFR+ LVCVD Q+ F GR FD ALL +LP S DPCGE GEFHTFV +GP+F +PVPV GEV + + F FCD+
Sbjct: 2 EPVLVAWSGGKDSAMALQAVLQDPALQVAALLTTVTEGYERISMHGVRRALLAQQAAAL--DLPLEEVRIPPTCVNADYEARMEAVL--TRYQAQGVSRVVFGDLFLEEVRQYRERQLGRIG------MAGLFPLWGRPTGPLARAFIAQGFRALLVCVDPAQVAPAFCGRAFDEALLADLPASADPCGERGEFHTFVYEGPIFRRPVPVARGEVVCR---DGFWFCDV 217
BLAST of NO28G00910 vs. NCBI_GenBank
Match: WP_043958670.1 (hypothetical protein [Lysobacter sp. A03] >KIQ96921.1 hypothetical protein TI01_1535 [Lysobacter sp. A03]) HSP 1 Score: 205.7 bits (522), Expect = 1.800e-49 Identity = 110/230 (47.83%), Postives = 147/230 (63.91%), Query Frame = 0
Query: 24 QVLLSFSGGKDSSMALHVLLQDPSYDVVGLLISVRQDTDRVSVHEVRRELLDAQVAALPGNLAVFEVALPPTSTNAEYEGALFAALDAARCRFPQLAILAFGDLFLQDVRDYRVGMLARWSGDDGRPLMPLFPIWGRDTTALAQDVIKLGFRSHLVCVDTTQLGARFSGRQFDAALLDELPESVDPCGENGEFHTFVSDGPVFSKPVPVCGGEVALQGPGNRFAFCDLRL 254
Q+LL++SGGKD++ LH L +VVGLL ++ D RV++H +RR+LL AQ A+ L + E + S N YE A A+L AR R+P + +AFGDL L DVRD+R M AR + L P++G DTT LA+++++ G R+HL CVDT QL ARF+GR FD ALL +LP DPCGENGEFHT V DGP+F +P+ + GE L+ RFAF D +L
Sbjct: 4 QILLAWSGGKDAAWTLHRLRGRDDVEVVGLLTTLNGDFQRVAMHGIRRDLLRAQAEAV--GLPLLESVIAHGSDNDTYEAAFAASLSQARERWPGMDTIAFGDLLLADVRDWREAMCARHGWE------ILTPLFGSDTTVLAREMLEGGLRTHLCCVDTQQLDARFAGRLFDPALLADLPAGTDPCGENGEFHTLVEDGPMFGRPLQLQRGETVLR--DGRFAFTDFQL 223
BLAST of NO28G00910 vs. NCBI_GenBank
Match: WP_072756266.1 (ATP-binding protein [Thermomonas hydrothermalis] >SHF10383.1 MJ0570-related uncharacterized domain-containing protein [Thermomonas hydrothermalis]) HSP 1 Score: 205.7 bits (522), Expect = 1.800e-49 Identity = 107/227 (47.14%), Postives = 153/227 (67.40%), Query Frame = 0
Query: 26 LLSFSGGKDSSMALHVLLQDPSYDVVGLLISVRQDTDRVSVHEVRRELLDAQVAALPGNLAVFEVALPPTSTNAEYEGALFAALDAARCRFPQLAILAFGDLFLQDVRDYRVGMLAR--WSGDDGRPLMPLFPIWGRDTTALAQDVIKLGFRSHLVCVDTTQLGARFSGRQFDAALLDELPESVDPCGENGEFHTFVSDGPVFSKPVPVCGGEVALQGPGNRFAFCD 251
LLS+SGGKD++ ALHVL Q +++VVGLL ++ + DR+S+ +RR++L AQ A ++ V E +PP++ NA Y + AAL+ AR R+P L +AFGDL L+DVR +R + A W+ PLFP++ +TT LA+ ++ G ++HL CVDTT+L ARF+G FDAALLD+LP +DPCGE+GEFHT VS GP+F+ P+ + G L+ RFA+ D
Sbjct: 5 LLSWSGGKDAAWALHVLRQQGTFEVVGLLTTLTEGYDRISMQGIRRDVLYAQANA--ADVPVLEAWIPPSADNAAYIASFRAALERARSRWPGLTHIAFGDLLLEDVRAWRETLCAELGWT--------PLFPLFASNTTHLARQMLSAGLKAHLCCVDTTRLDARFAGHPFDAALLDQLPTGIDPCGEHGEFHTCVSAGPMFAAPLTLQPGPPLLR--AGRFAYTD 219
BLAST of NO28G00910 vs. NCBI_GenBank
Match: WP_056080620.1 (MULTISPECIES: ATP-binding protein [Rhodanobacter] >KQX99929.1 ATP-binding protein [Rhodanobacter sp. Root480] >KRA36132.1 ATP-binding protein [Rhodanobacter sp. Root627]) HSP 1 Score: 204.9 bits (520), Expect = 3.100e-49 Identity = 116/231 (50.22%), Postives = 144/231 (62.34%), Query Frame = 0
Query: 25 VLLSFSGGKDSSMALHVLLQDPSYDVVGLLISVRQDTDRVSVHEVRRELLDAQVAALPGNLAVFEVALPPTSTNAEYEGALFAALDAARCRFPQLAILAFGDLFLQDVRDYRVGMLAR--WSGDDGRPLMPLFPIWGRDTTALAQDVIKLGFRSHLVCVDTTQLGARFSGRQFDAALLDELPESVDPCGENGEFHTFVSDGPVFSKPVPVCGGEVALQGPGNRFAFCDLRL 254
+LL++SGGKD +AL LL DP + VVGLL ++ + RV++H VR+E+L AQ AAL L + EVAL +N YE A AL A+ R+P L AFGDLFLQDVRDYRV L R W +FP+WG DTT L++ I G R+ L CVDT QL A F GR +DAALLD LP VDPCGE GEFHT GP+F +P+ + GE L+ +RF F D L
Sbjct: 6 ILLAWSGGKDCLLALQRLLADPRWHVVGLLTTINRSYQRVAMHGVRQEVLAAQTAAL--GLPLVEVALDWPGSNEAYEKAHAEALAQAQRRWPGLRHCAFGDLFLQDVRDYRVRQLGRENWRA--------VFPLWGEDTTLLSRRFISEGHRARLCCVDTQQLDAGFCGRDYDAALLDSLPAGVDPCGERGEFHTLSYAGPLFRQPLTLNRGESVLR--DDRFQFTDFLL 224 The following BLAST results are available for this feature:
BLAST of NO28G00910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00910 ID=NO28G00910|Name=NO28G00910|organism=Nannochloropsis oceanica|type=gene|length=798bpback to top protein sequence of NO28G00910.1 >NO28G00910.1-protein ID=NO28G00910.1-protein|Name=NO28G00910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=266bpback to top Synonyms
Publications
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