NO28G00830, NO28G00830 (gene) Nannochloropsis oceanica

Overview
NameNO28G00830
Unique NameNO28G00830
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2853
Alignment locationchr28:276160..279012 -

Link to JBrowse

Properties
Property NameValue
DescriptionSPRY-domain-containing protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr28genomechr28:276160..279012 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013320ConA-like_dom
IPR001870B30.2/SPRY
IPR003877SPRY_dom
Homology
BLAST of NO28G00830 vs. NCBI_GenBank
Match: XP_005644176.1 (SPRY-domain-containing protein [Coccomyxa subellipsoidea C-169] >EIE19632.1 SPRY-domain-containing protein [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 119.8 bits (299), Expect = 4.600e-23
Identity = 65/165 (39.39%), Postives = 84/165 (50.91%), Query Frame = 0
Query:  112 LSSDRRTVRYVGKANHPQDVGTVKGDRPLPRDRACFYFEIEVLSTCEKRPTAAMTVGLAAKGFPMHRQPGTWPHSYGYRGSDGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCGPAFGEGDVIGCGVDFATQEVFYTKNGKYLGVAFRDIFRLP 277
            +  D+ TVRY G+  H  DVG ++G+RP+PR R  +Y+E+ VL   EK     + VG A K F M +QPG  PHSYGY G DG                                       + GP F  GDVIG G+    QE+F+TKNGK+LGVAFR + +LP
Sbjct:   40 VEKDKLTVRYTGQGAHNNDVGAIQGNRPVPRKRRVYYYEVTVLDAGEK---GLIGVGFADKNFKMGKQPGWEPHSYGYHGDDG-----------------------------KKFHQNGQGEEYGPQFTLGDVIGAGIHIQRQEIFFTKNGKHLGVAFRGLPQLP 172          
BLAST of NO28G00830 vs. NCBI_GenBank
Match: XP_005781905.1 (hypothetical protein EMIHUDRAFT_365889 [Emiliania huxleyi CCMP1516] >EOD29476.1 hypothetical protein EMIHUDRAFT_365889 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 117.1 bits (292), Expect = 3.000e-22
Identity = 61/158 (38.61%), Postives = 83/158 (52.53%), Query Frame = 0
Query:  115 DRRTVRYVGKANHPQDVGTVKGDRPLPRDRACFYFEIEVLSTCEKRPTAAMTVGLAAKGFPMHRQPGTWPHSYGYRGSDGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCGPAFGEGDVIGCGVDFATQEVFYTKNGKYLGVAFRDI 273
            D+R+VRY+GK NH  DVG ++ DRP P   A +YFE  VL   E+    A+ +GLA + F +HRQPG  P S+GY   DG                                         GPA+G GDV+GCG+  AT+ +F+T+NG++LGVAF D+
Sbjct:   52 DKRSVRYIGKGNHGYDVGAIRTDRPCPARCALYYFEATVLDAGER---GALCIGLAGESFSLHRQPGWEPDSFGYHAEDGRKYTDSERGEVY-----------------------------GPAWGAGDVVGCGLVNATRSIFFTRNGQHLGVAFSDV 177          
BLAST of NO28G00830 vs. NCBI_GenBank
Match: KOO33220.1 (spla ryanodine receptor domain-containing protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 107.8 bits (268), Expect = 1.800e-19
Identity = 58/164 (35.37%), Postives = 83/164 (50.61%), Query Frame = 0
Query:  109 HAALSSDRRTVRYVGKANHPQDVGTVKGDRPLPRDRACFYFEIEVLSTCEKRPTAAMTVGLAAKGFPMHRQPGTWPHSYGYRGSDGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCGPAFGEGDVIGCGVDFATQEVFYTKNGKYLGVAFRDI 273
            + A+  D+ TVRYVG+ NH QDVG+V+ D P P+    +Y+E+ V  +  +     + VG+A   FP+ RQPG  P+SY Y G DG                                         GP FG GDV+GCG+   ++E+F+TKNG +LGVAF ++
Sbjct:   44 YLAVGKDKLTVRYVGRGNHSQDVGSVRTDWPCPQRCLVYYYEVTVQDSGSR---GLIAVGMADSAFPLTRQPGWEPNSYSYAGYDG-----------------------------RRYFDSERGEPYGPCFGAGDVVGCGLLCGSREIFFTKNGAHLGVAFSEV 175          
BLAST of NO28G00830 vs. NCBI_GenBank
Match: OZJ06478.1 (hypothetical protein BZG36_00570 [Bifiguratus adelaidae])

HSP 1 Score: 101.7 bits (252), Expect = 1.300e-17
Identity = 58/168 (34.52%), Postives = 81/168 (48.21%), Query Frame = 0
Query:  109 HAALSSDRRTVRYVGKANHPQDVGTVKGDRPLPRDRACFYFEIEVLSTCEKRPTAAMTVGLAAKGFPMHRQPGTWPHSYGYRGSDGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCGPAFGEGDVIGCGVDFATQEVFYTKNGKYLGVAFRDIFRLP 277
            H  +S+D   V +VG+    +D  TV+ +RP+P     FYFE+EV+S   K     + +G+ AK   + R PG  P SYGY G DG                                       + GP + +GDVIGCGV+F  + +FYTKNGK+LG AF +I + P
Sbjct:  222 HLEISADGLGVVFVGQHKSDRDAATVRANRPIPPQTGIFYFEMEVVS---KGVEGFIGLGVCAKDVELARLPGWEPDSYGYHGDDG----------------------------QKFSSRSEKGKEYGPKYTKGDVIGCGVNFVDRSIFYTKNGKHLGTAFENIIKRP 358          
BLAST of NO28G00830 vs. NCBI_GenBank
Match: PRW50909.1 (Ran-binding 10 [Chlorella sorokiniana])

HSP 1 Score: 101.7 bits (252), Expect = 1.300e-17
Identity = 53/161 (32.92%), Postives = 80/161 (49.69%), Query Frame = 0
Query:  112 LSSDRRTVRYVGKANHPQDVGTVKGDRPLPRDRACFYFEIEVLSTCEKRPTAAMTVGLAAKGFPMHRQPGTWPHSYGYRGSDGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCGPAFGEGDVIGCGVDFATQEVFYTKNGKYLGVAFRDI 273
            +  D+ +VRY G A H  DVG+++ + P+P  R  +YFEI    T ++    ++++G + + F   R PG  PHSYGYRG  G                                       + GP+FG GDV+G G+     E+F+TKNG++LGVAFR++
Sbjct: 1987 VGKDKLSVRYNGPAQHDNDVGSIQSNNPVPLRRLVYYFEI----TVKEASGGSISLGYSDRNFKQGRHPGFEPHSYGYRGDTG---------------------------RKHHSTLPVRGEEYGPSFGPGDVVGAGIHLTKHEIFFTKNGEHLGVAFRNV 2116          
BLAST of NO28G00830 vs. NCBI_GenBank
Match: GAQ84119.1 (spla ryanodine receptor domain-containing protein [Klebsormidium nitens])

HSP 1 Score: 100.9 bits (250), Expect = 2.200e-17
Identity = 67/220 (30.45%), Postives = 96/220 (43.64%), Query Frame = 0
Query:  112 LSSDRRTVRYVGKANHPQDVGTVKGDRPLPRDRACFYFEIEVLSTCEKRPTAAMTVGLAAKGFPMHRQPGTWPHSYGYRGSDGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCGPAFGEGDVIGCGVDFATQEVFYTKNGKYLGVAFRDIFRLPGHHQQQYCHSATRQGVVRRYVRPYLPNAFPTAMMPRQASSNTAATEPVPSSPSFS 332
            +  D+ +VRY G   H  DVG+++ +RP+PR+R  +YFE+ V    ++     + +G   + F   RQPG    SYGY G DG                                         GP F  GDV+G GV+ ATQE+F+TKNGK+LGVAF D+  +   +     HS   +  V    RP+  +        R+          +PSS S S
Sbjct:   92 VGKDKLSVRYTGHGQHGHDVGSIQANRPVPRERLLYYFELTVRDRGDRN---CIAIGFTDENFKHSRQPGWEAGSYGYHGDDGKAYHASGRGDAY-----------------------------GPTFTTGDVVGAGVNHATQEIFFTKNGKHLGVAFADVREI--LYPTVGLHSKNERVEVNFGKRPFKFDLEALVQEERERRQRAVELVEMPSSISHS 277          
BLAST of NO28G00830 vs. NCBI_GenBank
Match: PSC76243.1 (Ran-binding 10 [Micractinium conductrix])

HSP 1 Score: 99.0 bits (245), Expect = 8.500e-17
Identity = 52/161 (32.30%), Postives = 77/161 (47.83%), Query Frame = 0
Query:  112 LSSDRRTVRYVGKANHPQDVGTVKGDRPLPRDRACFYFEIEVLSTCEKRPTAAMTVGLAAKGFPMHRQPGTWPHSYGYRGSDGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCGPAFGEGDVIGCGVDFATQEVFYTKNGKYLGVAFRDI 273
            +  +R  V+Y G A H  DVGT++ + P+PR +  +YFE+    T ++    ++++G A + F   R PG   HSYGYRG  G                                       + GPAFG GDV+G G+     E+F+TKNG++LG AFR +
Sbjct:   28 VGKNRLAVKYSGSAQHDNDVGTIQANHPVPRRQLIYYFEV----TVKEASGGSISLGFADRNFKQGRHPGFESHSYGYRGDTG---------------------------RKHHSALPARGEEYGPAFGPGDVVGAGIHLTKHEIFFTKNGQHLGSAFRHV 157          
BLAST of NO28G00830 vs. NCBI_GenBank
Match: PMD45045.1 (SPRY-domain-containing protein [Meliniomyces variabilis F])

HSP 1 Score: 97.4 bits (241), Expect = 2.500e-16
Identity = 74/271 (27.31%), Postives = 116/271 (42.80%), Query Frame = 0
Query:   11 PPLLTGLEQVLALEHSSPGEVIIAKEYNGEEYLSEEEMDEAATGWHLSYHHGDVLPS----TWDLSDSWGTINDERSALVQGMGSSCSSGHYKWRPEACGSYHAALS--SDRRTVRYVG---KANHPQDVGTVKGDRPLPRDRACFYFEIEVLSTCEKRPTAAMTVGLAAKGFPMHRQPGTWPHSYGYRGSDGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCGPAFGEGDVIGCGVDFATQEVFYTKNGKYLGVAFRDI 273
            P  L G + V  LE +   ++   KE +  +      +  +A+  +L   H  + PS    T+DL +    + DE  A +            KW  +     HAAL   SD + V++ G   + +   +   ++ D P+P     +YFE+ ++S   KR  +++ +G ++K  P+ R PG  P S+ Y G DG+                                        GP F  GDVIGCGV+F T   F+TKNG +LG AFR+I
Sbjct:  138 PSYLKGSKYVQKLEEAHKAKLSAHKEGHSAQSSQPGSLSTSASSINL---HAKMAPSHRGMTYDLIEKAPPVEDEALAPLPS----------KWNNQ---DKHAALEVLSDGQEVKFTGPKPERDRDHEAYAIRADHPMPPQCGIYYFEVTIIS--RKREESSIGIGFSSKSVPLSRLPGWEPESWAYHGDDGHSFCCQNSGKHY-----------------------------GPPFTAGDVIGCGVNFRTGSAFFTKNGDHLGTAFREI 361          
BLAST of NO28G00830 vs. NCBI_GenBank
Match: EEC73400.1 (hypothetical protein OsI_07653 [Oryza sativa Indica Group])

HSP 1 Score: 96.3 bits (238), Expect = 5.500e-16
Identity = 65/210 (30.95%), Postives = 91/210 (43.33%), Query Frame = 0
Query:   65 LPSTWDLSDSWGTINDERSA--LVQGMGSSCSSGHYKWRPEACGSYHAALSSDRRTVRYVGKANHPQDVGTVKGDRPLPRDRACFYFEIEVLSTCEKRPTAAMTVGLAAKGFPMHRQPGTWPHSYGYRGSDGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCGPAFGEGDVIGCGVDFATQEVFYTKNGKYLGVAFRDI 273
            L S W     WG    E  A      + ++ SSG +           A +S+DR +VRY+G   H  DVG V+ +RP P  RA +YFE+ V +  +K  T   ++G   + F M RQPG   +S GY G DGY                                        GP F  GD IG G+++ +QE F+TKNG  +G   ++I
Sbjct:   29 LASRWRSPAEWGAAAAEMEAEPAPSELNTTNSSGLF-----------AVVSTDRMSVRYLGVNQHGHDVGVVQANRPAPTRRAVYYFEMGVKNAGQKGQT---SIGFTTENFKMRRQPGWESNSCGYHGDDGY-----------------------------LYRGPGKSESFGPKFTSGDTIGAGINYFSQEFFFTKNGSLVGSFQKEI 195          
BLAST of NO28G00830 vs. NCBI_GenBank
Match: EEE57190.1 (hypothetical protein OsJ_07135 [Oryza sativa Japonica Group])

HSP 1 Score: 96.3 bits (238), Expect = 5.500e-16
Identity = 65/210 (30.95%), Postives = 91/210 (43.33%), Query Frame = 0
Query:   65 LPSTWDLSDSWGTINDERSA--LVQGMGSSCSSGHYKWRPEACGSYHAALSSDRRTVRYVGKANHPQDVGTVKGDRPLPRDRACFYFEIEVLSTCEKRPTAAMTVGLAAKGFPMHRQPGTWPHSYGYRGSDGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCGPAFGEGDVIGCGVDFATQEVFYTKNGKYLGVAFRDI 273
            L S W     WG    E  A      + ++ SSG +           A +S+DR +VRY+G   H  DVG V+ +RP P  RA +YFE+ V +  +K  T   ++G   + F M RQPG   +S GY G DGY                                        GP F  GD IG G+++ +QE F+TKNG  +G   ++I
Sbjct:   29 LASRWRSPAEWGAAAAEMEAEPAPSELNTTNSSGLF-----------AVVSTDRMSVRYLGVNQHGHDVGVVQANRPAPTRRAVYYFEMGVKNAGQKGQT---SIGFTTENFKMRRQPGWESNSCGYHGDDGY-----------------------------LYRGPGKSESFGPKFTSGDTIGAGINYFSQEFFFTKNGSLVGSFQKEI 195          
The following BLAST results are available for this feature:
BLAST of NO28G00830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005644176.14.600e-2339.39SPRY-domain-containing protein [Coccomyxa subellip... [more]
XP_005781905.13.000e-2238.61hypothetical protein EMIHUDRAFT_365889 [Emiliania ... [more]
KOO33220.11.800e-1935.37spla ryanodine receptor domain-containing protein ... [more]
OZJ06478.11.300e-1734.52hypothetical protein BZG36_00570 [Bifiguratus adel... [more]
PRW50909.11.300e-1732.92Ran-binding 10 [Chlorella sorokiniana][more]
GAQ84119.12.200e-1730.45spla ryanodine receptor domain-containing protein ... [more]
PSC76243.18.500e-1732.30Ran-binding 10 [Micractinium conductrix][more]
PMD45045.12.500e-1627.31SPRY-domain-containing protein [Meliniomyces varia... [more]
EEC73400.15.500e-1630.95hypothetical protein OsI_07653 [Oryza sativa Indic... [more]
EEE57190.15.500e-1630.95hypothetical protein OsJ_07135 [Oryza sativa Japon... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL060nonsL060Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL059nonsL059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR054ncniR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR094ngnoR094Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004887NSK004887Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO28G00830.1NO28G00830.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|606801gene_9186Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO28G00830.1NO28G00830.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO28G00830 ID=NO28G00830|Name=NO28G00830|organism=Nannochloropsis oceanica|type=gene|length=2853bp
ATGGACCATGAGTCCAGGAGCTGTCCTCCACCACCGCTGCTCACAGGGCT
AGAGCAGGTCCTCGCTTTGGAGCATAGCAGCCCCGGCGAGGTAATCATCG
CGAAGGAGTATAATGGGGAGGAGTACTTGTCCGAAGAGGAGATGGACGAA
GCTGCCACGGGGTGGCATCTTTCTTACCATCACGGCGACGTCTTGCCCTC
AACCTGGGACCTCTCCGACAGTTGGGGCACCATCAATGACGAAAGAAGTG
CGCTCGTGCAGGGCATGGGTAGCAGCTGCTCCAGTGGCCACTATAAATGG
CGGCCGGAGGCATGTGGTAGTTACCATGCCGCCCTGTCTAGTGATCGCCG
CACGGTGCGCTACGTGGGTAAGGCAAATCACCCCCAGGACGTGGGAACGG
TCAAGGGCGACCGCCCTTTGCCTCGAGACCGTGCTTGTTTCTACTTTGAG
ATTGAGGTTTTGTCCACCTGTGAAAAACGTCCGACGGCTGCCATGACTGT
GGGGCTGGCTGCTAAGGGCTTTCCCATGCACCGGCAACCAGGCACCTGGC
CGCATTCCTACGGCTACCGTGGCTCAGACGGCTATTTTTTTGCAGCCCTG
CCGCCTGAATGTACGAGTAGCGGTAGCGGTGGAGGAAGGGGGACCAATAA
TGGCAGTAGTAGTAGTAGTAGTAGCGGTAATTCGTCGACGCGAAAGAAAG
ACTGCGGCCCGGCCTTTGGCGAGGGTGACGTGATAGGCTGCGGCGTGGAT
TTTGCCACTCAGGAGGTTTTCTACACCAAGAATGGTAAGTACTTAGGCGT
CGCCTTTCGAGATATTTTTCGGCTCCCGGGGCACCACCAGCAGCAGTACT
GCCATTCAGCGACGCGCCAAGGGGTGGTCCGGAGGTACGTCAGGCCGTAC
CTGCCAAATGCCTTTCCAACTGCGATGATGCCTAGACAAGCCTCAAGCAA
CACTGCTGCTACTGAGCCGGTCCCTTCCTCCCCGTCATTCTCCTCTTCCG
GCATCGCCACTGCACGCGCACCCTCCATCCTCCTAAGCCGCGGTCGTTTC
CTACCAGACTCGGCGGCGGCGCCTGTAGGAGGAAGAGATGAAAGTGGTGA
GAGGGCCGAGGAGGGCCGGGGGGCAAGTCGTACCAGCACAACCATATCGC
GTGGATTAAGAGCTGCTATCCCTTCAGGAGTGGTCGCCTCGCGAGCTTCC
TGGTTGGCTGATGCGGGGGAGGAGGAAGGAGAAGAGGACGAGGACGAGGA
CGTGGAAGAGGAGGACGAAGAGGGAGCGGGTAGGCGAGATTATCGTGAGC
AAAGTCGGCGCCGGAGCGCGAGAGCTGGCCAAGATGGCGGAGGGGGAGGC
GGACATAGCAGCAGGGAGAGACGAGATGCTTCCTTTTCGGAAGGGTCGTC
GTCGTCGTCCACTGCCAGCGCCGGCAACAGCACTGACGTGACCATCCCTT
ACAACACCAGTCGCCCAGAGCGCCAACGGCATCAGCACCAGCACCAGCAC
CAGCACCAGCACGTCGCGAGCTCTCCACGGGTTCTGGCTGTCGCTAGATC
TCCCGAGGTCGCGTGGGACTTGTTTCCTGTCCTGAGCTTGCACGGCGTCG
GGGAATCGGCGCGCGTCAATTTCGGTCAGGAGCCTTTCTGCTTCGATCTA
CAGGCGAAGCGCGTGGCAGACGAGGCGGAGAGGGAGCGGCGACTTGCAGG
GGAGGGAATGGAGCGGGGAGTAGAGGAAAAGGTGGAAGTGGACGCGCTCA
TCAAGGACTATTTGCTTGTAGCGGGCTATCGGGAGACCTTGCGTTGCTTC
GATGATGTCATTAGCTCTAGCGCCCCTGCCATAACGAATCCTGCGGCGAC
GATTGCTGTGAAACAGGAGAAAACGCCCTATGGTGGGGGCTCGTCGAGCT
CGACGATGGACATCGTGGGAGCGTCGGAAGAGCAGCAGCCAGGCCCCAAC
AGTAGCTGCGGCCGCGAGCACGAGGAGAATGCAAGCGGCGAATTGAGTAG
AGACCGACCAAGTACGTTTGCTCAAAGCTTGCGGGAGCGGACGGTGCACT
TGAGCTGCAGTCTGACGTTTCGGCATGAGTTGCGGCAGATGCTCCTTTCC
GGCGGAGGAGTGGCCGTGATCACAGAGCACTTGATCAAGAATTATCCACG
ATTGTGGCGCCAACGCCCTATCATCCGCTTTGAATTGCACAGCCTTGCTT
ACTTGGATTTGTTGCGGCAGGGTGAGGGTGCGCTGCGAGAGGCGCTGGTC
TATGCGCAACAGAAGCTGTTGCCCTTTACCTTAGGGGATACCCACCAGTT
GGAAACGATAGGGGGCCTGGAAGGAGACGTCGACCAAGACAGTAGCATGA
ACATGGTGATGGGTGGAAAGGATAGCAATGACGACATTCCGAGTCCGAGC
AAGGGCCGTAAGATGAATTTCCGGCGACGGCGTTTCCTCAGGAAGCGTGA
GGTTGACCCAGGGGGGCCAGCCGAGCGACGGCCCCGGAGCCCGGAGCCTC
TTCGCTCCTCATCGTTTGTCTCGCCTCGCCTCGACTTTGCGATGCGACTT
CGGGACCTAATAGGGCTGGTGGCCTACTATCCCAACCTCTCCGGCTCCCC
GGCGGCCTACCTCTTGTCCAAGGGTCATCGCGAGGACGTAGCGGACAAGT
TGAACGCGGCCATTCTGGAGGAGGTGCACGAAAACGGCGAAGGAGAGAAG
GAATCCGACAAGGATGATCGAGATCGCCCCCTTCTAGAAAGAGCCTTGGT
TGGCCTGGCGACCATGCACGAGACATTGCGGGAGGTTAAGAGCGGAGGGC
GGGGCGAAAACTTCCGCCTCCCGGCGCTCTCTCAAGCGCACAAGGCATTC
TAG
back to top

protein sequence of NO28G00830.1

>NO28G00830.1-protein ID=NO28G00830.1-protein|Name=NO28G00830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=951bp
MDHESRSCPPPPLLTGLEQVLALEHSSPGEVIIAKEYNGEEYLSEEEMDE
AATGWHLSYHHGDVLPSTWDLSDSWGTINDERSALVQGMGSSCSSGHYKW
RPEACGSYHAALSSDRRTVRYVGKANHPQDVGTVKGDRPLPRDRACFYFE
IEVLSTCEKRPTAAMTVGLAAKGFPMHRQPGTWPHSYGYRGSDGYFFAAL
PPECTSSGSGGGRGTNNGSSSSSSSGNSSTRKKDCGPAFGEGDVIGCGVD
FATQEVFYTKNGKYLGVAFRDIFRLPGHHQQQYCHSATRQGVVRRYVRPY
LPNAFPTAMMPRQASSNTAATEPVPSSPSFSSSGIATARAPSILLSRGRF
LPDSAAAPVGGRDESGERAEEGRGASRTSTTISRGLRAAIPSGVVASRAS
WLADAGEEEGEEDEDEDVEEEDEEGAGRRDYREQSRRRSARAGQDGGGGG
GHSSRERRDASFSEGSSSSSTASAGNSTDVTIPYNTSRPERQRHQHQHQH
QHQHVASSPRVLAVARSPEVAWDLFPVLSLHGVGESARVNFGQEPFCFDL
QAKRVADEAERERRLAGEGMERGVEEKVEVDALIKDYLLVAGYRETLRCF
DDVISSSAPAITNPAATIAVKQEKTPYGGGSSSSTMDIVGASEEQQPGPN
SSCGREHEENASGELSRDRPSTFAQSLRERTVHLSCSLTFRHELRQMLLS
GGGVAVITEHLIKNYPRLWRQRPIIRFELHSLAYLDLLRQGEGALREALV
YAQQKLLPFTLGDTHQLETIGGLEGDVDQDSSMNMVMGGKDSNDDIPSPS
KGRKMNFRRRRFLRKREVDPGGPAERRPRSPEPLRSSSFVSPRLDFAMRL
RDLIGLVAYYPNLSGSPAAYLLSKGHREDVADKLNAAILEEVHENGEGEK
ESDKDDRDRPLLERALVGLATMHETLREVKSGGRGENFRLPALSQAHKAF
*
back to top
Synonyms
Publications