NO28G00810, NO28G00810 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G00810 vs. NCBI_GenBank
Match: EWM20925.1 (cellulase 2 [Nannochloropsis gaditana]) HSP 1 Score: 476.1 bits (1224), Expect = 8.900e-131 Identity = 221/330 (66.97%), Postives = 258/330 (78.18%), Query Frame = 0 Query: 1 MDLLIVECGKRGILVMLDQHRLDPERGISDLWYDEGYEEPVILKSWDVMVGRYKKYWNVFALDLKNEPHGSCTWGSGEALTDWKAASERVMKFIAHAHPDFLGLFFVSGIWGGGGHWWGGNFRGVRMKPVDLGEEGMNRRVVYTPHVYGPDVYPQAYFSSWSFPNNLPAIWEAHWGFLRGMEGRGGGEGGRAVVVSEWGGFCKGKDAKWQEKVARYLWERGMADNFYWCLNPNSGDTGGILLDDWTTLHIEKLRILHTLQPAPTLLRELDVLPSSLPEKENKKGEKGREEEKEGKVVRLYEYQLGVETAALSSTVAAVSAKKVKRCFGLF 331 MD L+ E GKRG++VMLDQHRLDP+RGISDLWYDEGYEEPVIL+SWD+M+ R+K +WNVFALDLKNEPHG C+WGSGEALTDWKAASER+++ IA AHPDF GLFFVSGIWGGGGHWWGGNFR VR PVD+G G+NRRVVYTPHVYGPDV+PQ+YFSSWSFP+NLPA+W+ HWGFL G+ AVVVSEWGGFC+GKDAKWQE++ARYL E+GMADNFYWCLNPNSGDTGGILLDDW+T+H +KL++L +QP P+ L L + + GE GR E E Y Y+LGV T L T+ A + C G F Sbjct: 112 MDKLVEEAGKRGMMVMLDQHRLDPDRGISDLWYDEGYEEPVILRSWDIMLARFKTHWNVFALDLKNEPHGPCSWGSGEALTDWKAASERIIRHIAAAHPDFRGLFFVSGIWGGGGHWWGGNFRRVREHPVDVGSTGLNRRVVYTPHVYGPDVFPQSYFSSWSFPDNLPAVWDLHWGFLSGVL-------ETAVVVSEWGGFCRGKDAKWQERIARYLREKGMADNFYWCLNPNSGDTGGILLDDWSTMHEQKLKLLRDVQPEPSRLLPLGTRKAPV----RGAGESGRSEAAE------YRYELGVPTPDL--TLKTSPASQTSGCCGCF 422
BLAST of NO28G00810 vs. NCBI_GenBank
Match: EWM26490.1 (cellulase 2 [Nannochloropsis gaditana]) HSP 1 Score: 258.5 bits (659), Expect = 2.900e-65 Identity = 127/296 (42.91%), Postives = 179/296 (60.47%), Query Frame = 0 Query: 4 LIVECGKRGILVMLDQHRLDPERGISDLWYDEGYEEPVILKSWDVMVGRYKKYWNVFALDLKNEPHGSCTWGSGEALTDWKAASERVMKFIAHAHPDFLGLFFVSGI---------WGGGGHWWGGNFRGVRMKPVDLGEEGMNRRVVYTPHVYGPDVYPQAYFSSWSFPNNLPAIWEAHWGFLRGMEGRGGGEGGRAVVVSEWGGFCKGKDAKWQEKVARYLWERGMADNFYWCLNPNSGDTGGILLDDWTTLHIEKLRILHTLQPAPTLL--RELDVLPSSLPEKENKKGEKGR 289 +I + + GIL+MLD HRL+ E I +LWYD+ Y + ++WD ++ + WN+FA+DLKNEPHG TWGSG+A TDW A+E + ++ HP + GL FV G WWGG+ GV+ P+DLG + +N+R+VY+PHVYGPD + Q YF + +FP+N+P IW+ W F+ + RAVVV EWGG + +D WQ+ A++L + + D FYWCLNPNSGDTGG+L D+ T +KL +L +QP PT + + D S N K +KGR Sbjct: 162 IIDKAAEYGILIMLDMHRLN-EDFIPELWYDDKYSMDDVKEAWDNLLTAFGDRWNLFAIDLKNEPHGVATWGSGKATTDWNTAAEELATYLYKKHPQYKGLVFVEGTQLASAKHHKLDKNNKWWGGDLEGVQEFPIDLGSDALNKRLVYSPHVYGPDAFVQPYFEAKNFPDNMPDIWKKQWAFVE-------EQTDRAVVVGEWGGRYENQDKIWQDSFAKFLVDECLEDTFYWCLNPNSGDTGGLLDYDFLTPMPKKLALLAKVQPHPTFITVKGSDQYCISPGAYANPKCDKGR 449
BLAST of NO28G00810 vs. NCBI_GenBank
Match: XP_013898571.1 (cellulase [Monoraphidium neglectum] >KIY99551.1 cellulase [Monoraphidium neglectum]) HSP 1 Score: 255.4 bits (651), Expect = 2.500e-64 Identity = 125/271 (46.13%), Postives = 164/271 (60.52%), Query Frame = 0 Query: 2 DLLIVECGKRGILVMLDQHRLDPERGISDLWYDEGYEEPVILKSWDVMVGRYKKYWNVFALDLKNEPHGSCTWGSGEALTDWKAASERVMKFIAHAHPDFLGLFFVSG------IWGGGGHWWGGNFRGVRMKPVDLGEEGMNRRVVYTPHVYGPDVYPQAYFSSWSFPNNLPAIWEAHWGFLRGMEGRGGGEG-GRAVVVSEWGGF-CKGKDAKWQEKVARYLWERGMADNFYWCLNPNSGDTGGILLDDWTTLHIEKLRILHTLQPAPT 265 DL + EC KRG+LV+LD HRL + I +LWYD Y E +L++W +V RY+ WNVFA DL NEPHG +WG G TDW+ A+ER+ K + A+P L FV G + G WWGG+ + PV L + ++VY+PHVYGPDV+ Q YF+ FP N+P IW H+GF + EG G A+ EWGG+ +G D WQ+ +A ++ E + D+FYWCLNPNSGDTGG+L DDW T H KL I+ P PT Sbjct: 56 DLFVNECAKRGLLVLLDLHRLAGAKDIPELWYDADYPEASVLRAWRTIVLRYRGCWNVFAADLNNEPHGRASWGDGSIATDWQLAAERIGKVVLEANPKL--LIFVEGVETNAVVQPGENCWWGGHIAAAKKAPVVL---PVADKLVYSPHVYGPDVHKQPYFADPQFPANMPDIWMRHFGFCK-------AEGLGPAICFGEWGGWGGEGPDRVWQDALASWMTENDVTDSFYWCLNPNSGDTGGVLQDDWRTPHKHKLEIIARAHPNPT 314
BLAST of NO28G00810 vs. NCBI_GenBank
Match: EWM23139.1 (cellulase 2 [Nannochloropsis gaditana]) HSP 1 Score: 240.0 bits (611), Expect = 1.100e-59 Identity = 115/272 (42.28%), Postives = 166/272 (61.03%), Query Frame = 0 Query: 1 MDLLIVECGKRGILVMLDQHRLDPERGISDLWYDEGYEEPVILKSWDVMVGRYKKYWNVFALDLKNEPHGSCTWGSGEALTDWKAASERVMKFIAHAHPDFLGLFFVSGI----WGG-GGHWWGGNFRGVRMKPVDLGEEGMNRRVVYTPHVYGPDVYPQ-AYFSSWSFPNNLPAIWEAHWGFLRGMEGRGGGEGGRAVVVSEWGGFCKG--KDAKWQEKVARYLWERGMADNFYWCLNPNSGDTGGILLDDWTTLHIEKLRILHTLQPAPT 265 MD + +GIL++LD H + E+GI+DLWYDE + ++L W +++ R+ WN+ +DLKNEPHG +WG G TDW A + + ++ +A PDF G+FFV GI W +WWGGN GVR P+ G E ++RRVVY+PH+YGP+V+P+ YF FP+N+P IW+ +G++ GRAVV+ EWGG G K A Q+K+A +L + DNF+WCLNP + GG+L D+ + L++LH +QP PT Sbjct: 267 MDRIFDAAAAQGILILLDLHVISVEKGITDLWYDETADGALVLDLWTLLLRRFAGRWNLLGIDLKNEPHGIASWGHGHPKTDWNAFATKSIQTLATRVPDFHGVFFVEGIERPRWNSPHAYWWGGNLEGVRKYPISTGSEDLDRRVVYSPHIYGPEVFPRHRYFQDSRFPDNMPGIWDHQFGWIE-------KSTGRAVVLGEWGGSIVGDRKAAANQQKLAEWLVHACIPDNFWWCLNPATEFNGGLLARDYQAVDKNVLQMLHYVQPKPT 531
BLAST of NO28G00810 vs. NCBI_GenBank
Match: EWM21124.1 (cellulase 2 [Nannochloropsis gaditana]) HSP 1 Score: 236.5 bits (602), Expect = 1.200e-58 Identity = 109/273 (39.93%), Postives = 158/273 (57.88%), Query Frame = 0 Query: 1 MDLLIVECGKRGILVMLDQHRLDPERGISDLWYDEG-YEEPVILKSWDVMVGRYKKYWNVFALDLKNEPHGSCTWGSGEALTDWKAASERVMKFIAHAHPDFLGLFFVSGIW--------GGGGHWWGGNFRGVRMKPVDLGEEGMNRRVVYTPHVYGPDVYPQAYFSSWSFPNNLPAIWEAHWGFLRGMEGRGGGEGGRAVVVSEWGGFCKGKDAKWQEKVARYLWERGMADNFYWCLNPNSGDTGGILLDDWTTLHIEKLRILHTLQPAPT 265 +DLL + + GIL++LD H LDP++G+S LWYD Y E +L W+ ++ RY +WN+F LD+ NE H +WG G+ +TD+ ER + F+ P + GLFFV GI+ +WWGGN G P+D+ +N R+VY PH+YGPDV YF+ WSFPNNL +W+ +G+L +A+VV EWGG C KD QE +A+++ + NF+W LNP S DT G++ DW+ K+ +L +QP P+ Sbjct: 319 IDLLFEKAKENGILILLDMHTLDPDKGVSRLWYDPAKYSEATVLWGWERILSRYVHHWNLFGLDIMNECHDHASWGKGDPMTDFNRYVERFILFVHERVPSYRGLFFVEGIFLNAMGRDQSPWPYWWGGNLFGADKYPIDVKIAALNDRIVYAPHIYGPDVSNMFYFNDWSFPNNLKNVWDNQFGWLI-------KSTRKALVVGEWGGSCNNKDGIVQEHLAQWMIDNCFQSNFWWALNPGSADTDGLMSQDWSHFDERKMALLGKVQPNPS 584
BLAST of NO28G00810 vs. NCBI_GenBank
Match: PDM84795.1 (hypothetical protein PRIPAC_33818 [Pristionchus pacificus]) HSP 1 Score: 233.4 bits (594), Expect = 1.000e-57 Identity = 117/297 (39.39%), Postives = 165/297 (55.56%), Query Frame = 0 Query: 1 MDLLIVECGKRGILVMLDQHRLDPERGISDLWYDEGYEEPVILKSWDVMVGRY-------KKYWNVFALDLKNEPHGSCTWGSGEALTDWKAASERVMKFIAHAHPDFLGLFFVSGIWGGGGHWWGGNFRGVRMKPVDLGEEGMNRRVVYTPHVYGPDVYPQAYFSSWSFPNNLPAIWEAHWGFLRGMEGRGGGEGGRAVVVSEWGGFCK--GKDAKWQEKVARYLWERGMADNFYWCLNPNSGDTGGILLDDWTTLHIEKLRILHTLQPAPTLLR----ELDVLPSSLPEKENKKG 285 +D I +RG+L+MLD HR+ P GIS+LWY+ Y E ++ W ++ RY K WNVFA+DLKNEPH S +WG+ A TDW A+ER++ ++ F GLFFV GI WG V P++ G +N RV+Y+PH YGP VY + F++ FPNNL I+ A +GF+ + G VVV EWGG + +D W + +L + + +NFYWCLNPNS DTGG+L DDW T K+ + + QP PT + ++ + + PE + G Sbjct: 98 LDAFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPESQVISLWQSLITRYSDRQVQLKWIWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSLS----SFPGLFFVEGI------EWGNRLENVAQFPINTGNASLNNRVIYSPHCYGPSVYDRPEFNTQDFPNNLDGIYMAKYGFI-------VNQTGHPVVVGEWGGRAEVGSRDMAWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPTPRKINLTNRAQPNPTKFQPQNGQICITAGAFPEAHCRVG 377
BLAST of NO28G00810 vs. NCBI_GenBank
Match: EWM26893.1 (cellulase 2 [Nannochloropsis gaditana]) HSP 1 Score: 229.2 bits (583), Expect = 1.900e-56 Identity = 110/259 (42.47%), Postives = 159/259 (61.39%), Query Frame = 0 Query: 13 ILVMLDQHRLDPERGISDLWYDEGYEEPVILKSWDVMVGRYKKYWNVFALDLKNEPHGSCTWGSGEALTDWKAASERVMKFIAHAHPDFLGLFFVSGIWGGGGHWWGGNFRGVRMKPVDLGEEGMNRRVVYTPHVYGPDVYPQAYFSSW-SFPNNLPAIWEAHWGFLRGMEGRGGGEGGRAVVVSEWGG----FCKGKDAKWQEKVARYLWERGMADNFYWCLNPNSGDTGGILLDDWTTLHIEKLRILHTLQPAPTLL 267 ILVMLD HRL+ ++ I +LWY + Y + +L +WD+++G K +WN+FA+DLKNEPHG+ TWGSG A TDW A+E++ K + HP+F GL FV G+ + F ++ P+D G+ N R+VY+PH YGP V +F+ + +FP + + WE WGF+ + G A V+ EWGG + KD WQ++ A+YL E+ M+D F W LNP SGDTGG+L +W +KL + T+QP P+ L Sbjct: 170 ILVMLDSHRLN-DQEIPELWYSQEYTQEDMLAAWDILLGDLKHHWNLFAIDLKNEPHGAATWGSGNAATDWNTAAEKIGKHLLTKHPEFKGLVFVEGL------GYSIEFEKIKTHPIDFGKPEFNERLVYSPHQYGPSVTGDLHFAGYVNFPASQLSEWERCWGFIE-------EKTGHACVLGEWGGKYDSYHNDKDMVWQDRFAKYLVEKCMSDQFVWDLNPESGDTGGVLKANWWDAEEKKLALYDTVQPHPSWL 414
BLAST of NO28G00810 vs. NCBI_GenBank
Match: ADV58292.1 (cellulase 1, partial [Pristionchus pacificus]) HSP 1 Score: 224.2 bits (570), Expect = 6.100e-55 Identity = 118/272 (43.38%), Postives = 157/272 (57.72%), Query Frame = 0 Query: 1 MDLLIVECGKRGILVMLDQHRLDPERGIS-DLWYDE--GYEEPVILKSWDVMVGRYKKYWNVFALDLKNEPHGSCTWGSGEALTDWKAASERVMKFIAHAHPDFLGLFFVSGIWGGGGHWWGGNFRGVRMKPVDLGEEGMNRRVVYTPHVYGPDVYPQAYF---SSWSFPNNLPAIWEAHWGFLRGMEGRGGGEGGRAVVVSEWGGFCK--GKDAKWQEKVARYLWERGMADNFYWCLNPNSGDTGGILLDDWTTLHIEKLRILHTLQPAPT 265 +D+ I G+RG+L++LD HR IS LWY+ GY E +++ W +V RYK WNVFA+DLKNEPH + TWG TDW A+ER++ +A +F GLFFV GI WGG F P++ G +N RVVY+PH YGPDVY ++ F + + NL I+ A +GFL E G VV+ EWGG K +DAKW A ++ ++ M +NFYW +NPNSG TGG+L DDW T KL ++ QP PT Sbjct: 91 LDIFIDRAGERGLLIVLDNHRTQSGGYISPPLWYNNSAGYPEDEVIRLWKHLVMRYKNQWNVFAIDLKNEPHDAATWGRSNRNTDWNQAAERMI----NALHEFPGLFFVGGI------EWGGRFENAAQYPIETGHAHLNERVVYSPHCYGPDVYDRSEFHVENMHEYAKNLDRIYTAKYGFL--------AEKGYPVVIGEWGGKAKPGTRDAKWNNWFADWIRDKCMTNNFYWAINPNSGHTGGLLEDDWKTPIQHKLDLVSRAQPNPT 344
BLAST of NO28G00810 vs. NCBI_GenBank
Match: ADV58298.1 (cellulase 1, partial [Pristionchus pacificus]) HSP 1 Score: 224.2 bits (570), Expect = 6.100e-55 Identity = 118/272 (43.38%), Postives = 157/272 (57.72%), Query Frame = 0 Query: 1 MDLLIVECGKRGILVMLDQHRLDPERGIS-DLWYDE--GYEEPVILKSWDVMVGRYKKYWNVFALDLKNEPHGSCTWGSGEALTDWKAASERVMKFIAHAHPDFLGLFFVSGIWGGGGHWWGGNFRGVRMKPVDLGEEGMNRRVVYTPHVYGPDVYPQAYF---SSWSFPNNLPAIWEAHWGFLRGMEGRGGGEGGRAVVVSEWGGFCK--GKDAKWQEKVARYLWERGMADNFYWCLNPNSGDTGGILLDDWTTLHIEKLRILHTLQPAPT 265 +D+ I G+RG+L++LD HR IS LWY+ GY E +++ W +V RYK WNVFA+DLKNEPH + TWG TDW A+ER++ +A +F GLFFV GI WGG F P++ G +N RVVY+PH YGPDVY ++ F + + NL I+ A +GFL E G VV+ EWGG K +DAKW A ++ ++ M +NFYW +NPNSG TGG+L DDW T KL ++ QP PT Sbjct: 91 LDIFIDRAGERGLLIVLDNHRTQSGGYISPPLWYNNSAGYPEDEVIRLWKHLVMRYKNQWNVFAIDLKNEPHDAATWGRSNRNTDWNQAAERMI----NALHEFPGLFFVGGI------EWGGRFENAAQYPIETGHAHLNERVVYSPHCYGPDVYDRSEFHVENMHEYAKNLDRIYTAKYGFL--------AEKGYPVVIGEWGGKAKPGTRDAKWNNWFADWIRDKCMTNNFYWAINPNSGHTGGLLEDDWKTPIQHKLDLVSRAQPNPT 344
BLAST of NO28G00810 vs. NCBI_GenBank
Match: SMF97355.1 (endoglucanase [Methylomagnum ishizawai]) HSP 1 Score: 223.8 bits (569), Expect = 8.000e-55 Identity = 116/269 (43.12%), Postives = 154/269 (57.25%), Query Frame = 0 Query: 1 MDLLIVECGKRGILVMLDQHRLDPERGISDLWYDEGYEEPVILKSWDVMVGRYKKYWNVFALDLKNEPHGSCTWGSGEALTDWKAASERVMKFIAHAHPDFLGLFFVSGI------WGGGGHWWGGNFRGVRMKPVDLGEEGMNRRVVYTPHVYGPDVYPQAYFSSWSFPNNLPAIWEAHWGFLRGMEGRGGGEGGRAVVVSEWGGFC----KGKDAKWQEKVARYLWERGMADNFYWCLNPNSGDTGGILLDDWTTLHIEKLRILHTL 260 +D ++ E ++G ++LD HRLD + GIS+LWYD Y E + M RYK + +DLKNEPHG+ TWG G+ LTDW A+ER + PD L FV GI G HWWGGN + P+ + E R+V +PHVYGPDVY Q YF + +FP NLPAIWEAH+G R + G A+ + E GG +D +Q+ + YL +G+ D FYW NPNSGDTGGIL +DW T+ +KL +L+ L Sbjct: 112 LDAVLGEFDRQGFYILLDHHRLDCDGGISELWYDGSYSEQRWIGDLSFMAARYKGLSHFLGIDLKNEPHGAATWGVGDPLTDWNKAAERAATAVLGVAPD--ALVFVEGIEKNPSCSGSVNHWWGGNLEPLACHPLAIPAE----RLVLSPHVYGPDVYNQPYFGAANFPGNLPAIWEAHFGRFR--------DAGYAIAIGETGGRYGHGGSAQDKPFQDALIDYLGGKGITDLFYWSWNPNSGDTGGILQNDWKTVWQDKLDLLNRL 366 The following BLAST results are available for this feature:
BLAST of NO28G00810 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00810 ID=NO28G00810|Name=NO28G00810|organism=Nannochloropsis oceanica|type=gene|length=1908bpback to top protein sequence of NO28G00810.2 >NO28G00810.2-protein ID=NO28G00810.2-protein|Name=NO28G00810.2|organism=Nannochloropsis oceanica|type=polypeptide|length=331bpback to top protein sequence of NO28G00810.1 >NO28G00810.1-protein ID=NO28G00810.1-protein|Name=NO28G00810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=378bpback to top Synonyms
Publications
|