NO28G00810, NO28G00810 (gene) Nannochloropsis oceanica

Overview
NameNO28G00810
Unique NameNO28G00810
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1908
Alignment locationchr28:267078..268985 -

Link to JBrowse

Properties
Property NameValue
DescriptionCellulase 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr28genomechr28:267078..268985 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0008152metabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR017853Glycoside_hydrolase_SF
IPR001547Glyco_hydro_5
Homology
BLAST of NO28G00810 vs. NCBI_GenBank
Match: EWM20925.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 476.1 bits (1224), Expect = 8.900e-131
Identity = 221/330 (66.97%), Postives = 258/330 (78.18%), Query Frame = 0
Query:    1 MDLLIVECGKRGILVMLDQHRLDPERGISDLWYDEGYEEPVILKSWDVMVGRYKKYWNVFALDLKNEPHGSCTWGSGEALTDWKAASERVMKFIAHAHPDFLGLFFVSGIWGGGGHWWGGNFRGVRMKPVDLGEEGMNRRVVYTPHVYGPDVYPQAYFSSWSFPNNLPAIWEAHWGFLRGMEGRGGGEGGRAVVVSEWGGFCKGKDAKWQEKVARYLWERGMADNFYWCLNPNSGDTGGILLDDWTTLHIEKLRILHTLQPAPTLLRELDVLPSSLPEKENKKGEKGREEEKEGKVVRLYEYQLGVETAALSSTVAAVSAKKVKRCFGLF 331
            MD L+ E GKRG++VMLDQHRLDP+RGISDLWYDEGYEEPVIL+SWD+M+ R+K +WNVFALDLKNEPHG C+WGSGEALTDWKAASER+++ IA AHPDF GLFFVSGIWGGGGHWWGGNFR VR  PVD+G  G+NRRVVYTPHVYGPDV+PQ+YFSSWSFP+NLPA+W+ HWGFL G+          AVVVSEWGGFC+GKDAKWQE++ARYL E+GMADNFYWCLNPNSGDTGGILLDDW+T+H +KL++L  +QP P+ L  L    + +       GE GR E  E      Y Y+LGV T  L  T+    A +   C G F
Sbjct:  112 MDKLVEEAGKRGMMVMLDQHRLDPDRGISDLWYDEGYEEPVILRSWDIMLARFKTHWNVFALDLKNEPHGPCSWGSGEALTDWKAASERIIRHIAAAHPDFRGLFFVSGIWGGGGHWWGGNFRRVREHPVDVGSTGLNRRVVYTPHVYGPDVFPQSYFSSWSFPDNLPAVWDLHWGFLSGVL-------ETAVVVSEWGGFCRGKDAKWQERIARYLREKGMADNFYWCLNPNSGDTGGILLDDWSTMHEQKLKLLRDVQPEPSRLLPLGTRKAPV----RGAGESGRSEAAE------YRYELGVPTPDL--TLKTSPASQTSGCCGCF 422          
BLAST of NO28G00810 vs. NCBI_GenBank
Match: EWM26490.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 258.5 bits (659), Expect = 2.900e-65
Identity = 127/296 (42.91%), Postives = 179/296 (60.47%), Query Frame = 0
Query:    4 LIVECGKRGILVMLDQHRLDPERGISDLWYDEGYEEPVILKSWDVMVGRYKKYWNVFALDLKNEPHGSCTWGSGEALTDWKAASERVMKFIAHAHPDFLGLFFVSGI---------WGGGGHWWGGNFRGVRMKPVDLGEEGMNRRVVYTPHVYGPDVYPQAYFSSWSFPNNLPAIWEAHWGFLRGMEGRGGGEGGRAVVVSEWGGFCKGKDAKWQEKVARYLWERGMADNFYWCLNPNSGDTGGILLDDWTTLHIEKLRILHTLQPAPTLL--RELDVLPSSLPEKENKKGEKGR 289
            +I +  + GIL+MLD HRL+ E  I +LWYD+ Y    + ++WD ++  +   WN+FA+DLKNEPHG  TWGSG+A TDW  A+E +  ++   HP + GL FV G                WWGG+  GV+  P+DLG + +N+R+VY+PHVYGPD + Q YF + +FP+N+P IW+  W F+         +  RAVVV EWGG  + +D  WQ+  A++L +  + D FYWCLNPNSGDTGG+L  D+ T   +KL +L  +QP PT +  +  D    S     N K +KGR
Sbjct:  162 IIDKAAEYGILIMLDMHRLN-EDFIPELWYDDKYSMDDVKEAWDNLLTAFGDRWNLFAIDLKNEPHGVATWGSGKATTDWNTAAEELATYLYKKHPQYKGLVFVEGTQLASAKHHKLDKNNKWWGGDLEGVQEFPIDLGSDALNKRLVYSPHVYGPDAFVQPYFEAKNFPDNMPDIWKKQWAFVE-------EQTDRAVVVGEWGGRYENQDKIWQDSFAKFLVDECLEDTFYWCLNPNSGDTGGLLDYDFLTPMPKKLALLAKVQPHPTFITVKGSDQYCISPGAYANPKCDKGR 449          
BLAST of NO28G00810 vs. NCBI_GenBank
Match: XP_013898571.1 (cellulase [Monoraphidium neglectum] >KIY99551.1 cellulase [Monoraphidium neglectum])

HSP 1 Score: 255.4 bits (651), Expect = 2.500e-64
Identity = 125/271 (46.13%), Postives = 164/271 (60.52%), Query Frame = 0
Query:    2 DLLIVECGKRGILVMLDQHRLDPERGISDLWYDEGYEEPVILKSWDVMVGRYKKYWNVFALDLKNEPHGSCTWGSGEALTDWKAASERVMKFIAHAHPDFLGLFFVSG------IWGGGGHWWGGNFRGVRMKPVDLGEEGMNRRVVYTPHVYGPDVYPQAYFSSWSFPNNLPAIWEAHWGFLRGMEGRGGGEG-GRAVVVSEWGGF-CKGKDAKWQEKVARYLWERGMADNFYWCLNPNSGDTGGILLDDWTTLHIEKLRILHTLQPAPT 265
            DL + EC KRG+LV+LD HRL   + I +LWYD  Y E  +L++W  +V RY+  WNVFA DL NEPHG  +WG G   TDW+ A+ER+ K +  A+P    L FV G      +  G   WWGG+    +  PV L    +  ++VY+PHVYGPDV+ Q YF+   FP N+P IW  H+GF +        EG G A+   EWGG+  +G D  WQ+ +A ++ E  + D+FYWCLNPNSGDTGG+L DDW T H  KL I+    P PT
Sbjct:   56 DLFVNECAKRGLLVLLDLHRLAGAKDIPELWYDADYPEASVLRAWRTIVLRYRGCWNVFAADLNNEPHGRASWGDGSIATDWQLAAERIGKVVLEANPKL--LIFVEGVETNAVVQPGENCWWGGHIAAAKKAPVVL---PVADKLVYSPHVYGPDVHKQPYFADPQFPANMPDIWMRHFGFCK-------AEGLGPAICFGEWGGWGGEGPDRVWQDALASWMTENDVTDSFYWCLNPNSGDTGGVLQDDWRTPHKHKLEIIARAHPNPT 314          
BLAST of NO28G00810 vs. NCBI_GenBank
Match: EWM23139.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 240.0 bits (611), Expect = 1.100e-59
Identity = 115/272 (42.28%), Postives = 166/272 (61.03%), Query Frame = 0
Query:    1 MDLLIVECGKRGILVMLDQHRLDPERGISDLWYDEGYEEPVILKSWDVMVGRYKKYWNVFALDLKNEPHGSCTWGSGEALTDWKAASERVMKFIAHAHPDFLGLFFVSGI----WGG-GGHWWGGNFRGVRMKPVDLGEEGMNRRVVYTPHVYGPDVYPQ-AYFSSWSFPNNLPAIWEAHWGFLRGMEGRGGGEGGRAVVVSEWGGFCKG--KDAKWQEKVARYLWERGMADNFYWCLNPNSGDTGGILLDDWTTLHIEKLRILHTLQPAPT 265
            MD +      +GIL++LD H +  E+GI+DLWYDE  +  ++L  W +++ R+   WN+  +DLKNEPHG  +WG G   TDW A + + ++ +A   PDF G+FFV GI    W     +WWGGN  GVR  P+  G E ++RRVVY+PH+YGP+V+P+  YF    FP+N+P IW+  +G++           GRAVV+ EWGG   G  K A  Q+K+A +L    + DNF+WCLNP +   GG+L  D+  +    L++LH +QP PT
Sbjct:  267 MDRIFDAAAAQGILILLDLHVISVEKGITDLWYDETADGALVLDLWTLLLRRFAGRWNLLGIDLKNEPHGIASWGHGHPKTDWNAFATKSIQTLATRVPDFHGVFFVEGIERPRWNSPHAYWWGGNLEGVRKYPISTGSEDLDRRVVYSPHIYGPEVFPRHRYFQDSRFPDNMPGIWDHQFGWIE-------KSTGRAVVLGEWGGSIVGDRKAAANQQKLAEWLVHACIPDNFWWCLNPATEFNGGLLARDYQAVDKNVLQMLHYVQPKPT 531          
BLAST of NO28G00810 vs. NCBI_GenBank
Match: EWM21124.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 236.5 bits (602), Expect = 1.200e-58
Identity = 109/273 (39.93%), Postives = 158/273 (57.88%), Query Frame = 0
Query:    1 MDLLIVECGKRGILVMLDQHRLDPERGISDLWYDEG-YEEPVILKSWDVMVGRYKKYWNVFALDLKNEPHGSCTWGSGEALTDWKAASERVMKFIAHAHPDFLGLFFVSGIW--------GGGGHWWGGNFRGVRMKPVDLGEEGMNRRVVYTPHVYGPDVYPQAYFSSWSFPNNLPAIWEAHWGFLRGMEGRGGGEGGRAVVVSEWGGFCKGKDAKWQEKVARYLWERGMADNFYWCLNPNSGDTGGILLDDWTTLHIEKLRILHTLQPAPT 265
            +DLL  +  + GIL++LD H LDP++G+S LWYD   Y E  +L  W+ ++ RY  +WN+F LD+ NE H   +WG G+ +TD+    ER + F+    P + GLFFV GI+            +WWGGN  G    P+D+    +N R+VY PH+YGPDV    YF+ WSFPNNL  +W+  +G+L            +A+VV EWGG C  KD   QE +A+++ +     NF+W LNP S DT G++  DW+     K+ +L  +QP P+
Sbjct:  319 IDLLFEKAKENGILILLDMHTLDPDKGVSRLWYDPAKYSEATVLWGWERILSRYVHHWNLFGLDIMNECHDHASWGKGDPMTDFNRYVERFILFVHERVPSYRGLFFVEGIFLNAMGRDQSPWPYWWGGNLFGADKYPIDVKIAALNDRIVYAPHIYGPDVSNMFYFNDWSFPNNLKNVWDNQFGWLI-------KSTRKALVVGEWGGSCNNKDGIVQEHLAQWMIDNCFQSNFWWALNPGSADTDGLMSQDWSHFDERKMALLGKVQPNPS 584          
BLAST of NO28G00810 vs. NCBI_GenBank
Match: PDM84795.1 (hypothetical protein PRIPAC_33818 [Pristionchus pacificus])

HSP 1 Score: 233.4 bits (594), Expect = 1.000e-57
Identity = 117/297 (39.39%), Postives = 165/297 (55.56%), Query Frame = 0
Query:    1 MDLLIVECGKRGILVMLDQHRLDPERGISDLWYDEGYEEPVILKSWDVMVGRY-------KKYWNVFALDLKNEPHGSCTWGSGEALTDWKAASERVMKFIAHAHPDFLGLFFVSGIWGGGGHWWGGNFRGVRMKPVDLGEEGMNRRVVYTPHVYGPDVYPQAYFSSWSFPNNLPAIWEAHWGFLRGMEGRGGGEGGRAVVVSEWGGFCK--GKDAKWQEKVARYLWERGMADNFYWCLNPNSGDTGGILLDDWTTLHIEKLRILHTLQPAPTLLR----ELDVLPSSLPEKENKKG 285
            +D  I    +RG+L+MLD HR+ P  GIS+LWY+  Y E  ++  W  ++ RY       K  WNVFA+DLKNEPH S +WG+  A TDW  A+ER++  ++     F GLFFV GI       WG     V   P++ G   +N RV+Y+PH YGP VY +  F++  FPNNL  I+ A +GF+         + G  VVV EWGG  +   +D  W +    +L  + + +NFYWCLNPNS DTGG+L DDW T    K+ + +  QP PT  +    ++ +   + PE   + G
Sbjct:   98 LDAFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPESQVISLWQSLITRYSDRQVQLKWIWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSLS----SFPGLFFVEGI------EWGNRLENVAQFPINTGNASLNNRVIYSPHCYGPSVYDRPEFNTQDFPNNLDGIYMAKYGFI-------VNQTGHPVVVGEWGGRAEVGSRDMAWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPTPRKINLTNRAQPNPTKFQPQNGQICITAGAFPEAHCRVG 377          
BLAST of NO28G00810 vs. NCBI_GenBank
Match: EWM26893.1 (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 229.2 bits (583), Expect = 1.900e-56
Identity = 110/259 (42.47%), Postives = 159/259 (61.39%), Query Frame = 0
Query:   13 ILVMLDQHRLDPERGISDLWYDEGYEEPVILKSWDVMVGRYKKYWNVFALDLKNEPHGSCTWGSGEALTDWKAASERVMKFIAHAHPDFLGLFFVSGIWGGGGHWWGGNFRGVRMKPVDLGEEGMNRRVVYTPHVYGPDVYPQAYFSSW-SFPNNLPAIWEAHWGFLRGMEGRGGGEGGRAVVVSEWGG----FCKGKDAKWQEKVARYLWERGMADNFYWCLNPNSGDTGGILLDDWTTLHIEKLRILHTLQPAPTLL 267
            ILVMLD HRL+ ++ I +LWY + Y +  +L +WD+++G  K +WN+FA+DLKNEPHG+ TWGSG A TDW  A+E++ K +   HP+F GL FV G+       +   F  ++  P+D G+   N R+VY+PH YGP V    +F+ + +FP +  + WE  WGF+         + G A V+ EWGG    +   KD  WQ++ A+YL E+ M+D F W LNP SGDTGG+L  +W     +KL +  T+QP P+ L
Sbjct:  170 ILVMLDSHRLN-DQEIPELWYSQEYTQEDMLAAWDILLGDLKHHWNLFAIDLKNEPHGAATWGSGNAATDWNTAAEKIGKHLLTKHPEFKGLVFVEGL------GYSIEFEKIKTHPIDFGKPEFNERLVYSPHQYGPSVTGDLHFAGYVNFPASQLSEWERCWGFIE-------EKTGHACVLGEWGGKYDSYHNDKDMVWQDRFAKYLVEKCMSDQFVWDLNPESGDTGGVLKANWWDAEEKKLALYDTVQPHPSWL 414          
BLAST of NO28G00810 vs. NCBI_GenBank
Match: ADV58292.1 (cellulase 1, partial [Pristionchus pacificus])

HSP 1 Score: 224.2 bits (570), Expect = 6.100e-55
Identity = 118/272 (43.38%), Postives = 157/272 (57.72%), Query Frame = 0
Query:    1 MDLLIVECGKRGILVMLDQHRLDPERGIS-DLWYDE--GYEEPVILKSWDVMVGRYKKYWNVFALDLKNEPHGSCTWGSGEALTDWKAASERVMKFIAHAHPDFLGLFFVSGIWGGGGHWWGGNFRGVRMKPVDLGEEGMNRRVVYTPHVYGPDVYPQAYF---SSWSFPNNLPAIWEAHWGFLRGMEGRGGGEGGRAVVVSEWGGFCK--GKDAKWQEKVARYLWERGMADNFYWCLNPNSGDTGGILLDDWTTLHIEKLRILHTLQPAPT 265
            +D+ I   G+RG+L++LD HR      IS  LWY+   GY E  +++ W  +V RYK  WNVFA+DLKNEPH + TWG     TDW  A+ER++    +A  +F GLFFV GI       WGG F      P++ G   +N RVVY+PH YGPDVY ++ F   +   +  NL  I+ A +GFL         E G  VV+ EWGG  K   +DAKW    A ++ ++ M +NFYW +NPNSG TGG+L DDW T    KL ++   QP PT
Sbjct:   91 LDIFIDRAGERGLLIVLDNHRTQSGGYISPPLWYNNSAGYPEDEVIRLWKHLVMRYKNQWNVFAIDLKNEPHDAATWGRSNRNTDWNQAAERMI----NALHEFPGLFFVGGI------EWGGRFENAAQYPIETGHAHLNERVVYSPHCYGPDVYDRSEFHVENMHEYAKNLDRIYTAKYGFL--------AEKGYPVVIGEWGGKAKPGTRDAKWNNWFADWIRDKCMTNNFYWAINPNSGHTGGLLEDDWKTPIQHKLDLVSRAQPNPT 344          
BLAST of NO28G00810 vs. NCBI_GenBank
Match: ADV58298.1 (cellulase 1, partial [Pristionchus pacificus])

HSP 1 Score: 224.2 bits (570), Expect = 6.100e-55
Identity = 118/272 (43.38%), Postives = 157/272 (57.72%), Query Frame = 0
Query:    1 MDLLIVECGKRGILVMLDQHRLDPERGIS-DLWYDE--GYEEPVILKSWDVMVGRYKKYWNVFALDLKNEPHGSCTWGSGEALTDWKAASERVMKFIAHAHPDFLGLFFVSGIWGGGGHWWGGNFRGVRMKPVDLGEEGMNRRVVYTPHVYGPDVYPQAYF---SSWSFPNNLPAIWEAHWGFLRGMEGRGGGEGGRAVVVSEWGGFCK--GKDAKWQEKVARYLWERGMADNFYWCLNPNSGDTGGILLDDWTTLHIEKLRILHTLQPAPT 265
            +D+ I   G+RG+L++LD HR      IS  LWY+   GY E  +++ W  +V RYK  WNVFA+DLKNEPH + TWG     TDW  A+ER++    +A  +F GLFFV GI       WGG F      P++ G   +N RVVY+PH YGPDVY ++ F   +   +  NL  I+ A +GFL         E G  VV+ EWGG  K   +DAKW    A ++ ++ M +NFYW +NPNSG TGG+L DDW T    KL ++   QP PT
Sbjct:   91 LDIFIDRAGERGLLIVLDNHRTQSGGYISPPLWYNNSAGYPEDEVIRLWKHLVMRYKNQWNVFAIDLKNEPHDAATWGRSNRNTDWNQAAERMI----NALHEFPGLFFVGGI------EWGGRFENAAQYPIETGHAHLNERVVYSPHCYGPDVYDRSEFHVENMHEYAKNLDRIYTAKYGFL--------AEKGYPVVIGEWGGKAKPGTRDAKWNNWFADWIRDKCMTNNFYWAINPNSGHTGGLLEDDWKTPIQHKLDLVSRAQPNPT 344          
BLAST of NO28G00810 vs. NCBI_GenBank
Match: SMF97355.1 (endoglucanase [Methylomagnum ishizawai])

HSP 1 Score: 223.8 bits (569), Expect = 8.000e-55
Identity = 116/269 (43.12%), Postives = 154/269 (57.25%), Query Frame = 0
Query:    1 MDLLIVECGKRGILVMLDQHRLDPERGISDLWYDEGYEEPVILKSWDVMVGRYKKYWNVFALDLKNEPHGSCTWGSGEALTDWKAASERVMKFIAHAHPDFLGLFFVSGI------WGGGGHWWGGNFRGVRMKPVDLGEEGMNRRVVYTPHVYGPDVYPQAYFSSWSFPNNLPAIWEAHWGFLRGMEGRGGGEGGRAVVVSEWGGFC----KGKDAKWQEKVARYLWERGMADNFYWCLNPNSGDTGGILLDDWTTLHIEKLRILHTL 260
            +D ++ E  ++G  ++LD HRLD + GIS+LWYD  Y E   +     M  RYK   +   +DLKNEPHG+ TWG G+ LTDW  A+ER    +    PD   L FV GI       G   HWWGGN   +   P+ +  E    R+V +PHVYGPDVY Q YF + +FP NLPAIWEAH+G  R        + G A+ + E GG        +D  +Q+ +  YL  +G+ D FYW  NPNSGDTGGIL +DW T+  +KL +L+ L
Sbjct:  112 LDAVLGEFDRQGFYILLDHHRLDCDGGISELWYDGSYSEQRWIGDLSFMAARYKGLSHFLGIDLKNEPHGAATWGVGDPLTDWNKAAERAATAVLGVAPD--ALVFVEGIEKNPSCSGSVNHWWGGNLEPLACHPLAIPAE----RLVLSPHVYGPDVYNQPYFGAANFPGNLPAIWEAHFGRFR--------DAGYAIAIGETGGRYGHGGSAQDKPFQDALIDYLGGKGITDLFYWSWNPNSGDTGGILQNDWKTVWQDKLDLLNRL 366          
The following BLAST results are available for this feature:
BLAST of NO28G00810 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM20925.18.900e-13166.97cellulase 2 [Nannochloropsis gaditana][more]
EWM26490.12.900e-6542.91cellulase 2 [Nannochloropsis gaditana][more]
XP_013898571.12.500e-6446.13cellulase [Monoraphidium neglectum] >KIY99551.1 ce... [more]
EWM23139.11.100e-5942.28cellulase 2 [Nannochloropsis gaditana][more]
EWM21124.11.200e-5839.93cellulase 2 [Nannochloropsis gaditana][more]
PDM84795.11.000e-5739.39hypothetical protein PRIPAC_33818 [Pristionchus pa... [more]
EWM26893.11.900e-5642.47cellulase 2 [Nannochloropsis gaditana][more]
ADV58292.16.100e-5543.38cellulase 1, partial [Pristionchus pacificus][more]
ADV58298.16.100e-5543.38cellulase 1, partial [Pristionchus pacificus][more]
SMF97355.18.000e-5543.12endoglucanase [Methylomagnum ishizawai][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL059nonsL059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR054ncniR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR094ngnoR094Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004879NSK004879Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO28G00810.2NO28G00810.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO28G00810.1NO28G00810.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|560336gene_9183Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100061g12gene9498Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO28G00810.2NO28G00810.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO28G00810.1NO28G00810.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO28G00810 ID=NO28G00810|Name=NO28G00810|organism=Nannochloropsis oceanica|type=gene|length=1908bp
ACAATGCAGACAGTCACTCAGGGAACCAAACATCATCAATAATGGCCCAC
CCGCAAGAAGACATCGGTGCCACAAATCCGTCGACGAAGCGGGTCATTGG
GCCTCTGGTCTGGACTTCGGAGTGCCACAGCATTCTGGTGAACGGCCTGA
AGGTGGCAATTAAAGGGATCAATTGGTTTGGCTTTGgtacgtcgatgcgt
acatgggaagggggaaggaggagatgtcgttgtcgttcttcctctcaccc
ttaggatggggtaaagcgggaaggggaaggcttgtcgcatacgtttaggc
agtatccgtagccatttaataccttaaggttgtgcccgggagatccgtgc
gcagagaagaaagcgtgtagccatggtttgtcaaaagcgcagcgttgggg
cgctgtctctttttgcaactctcttctcccttctcccttgcgcccttatt
ccctttctgccacccatctttccaaacactcctagAAACAACGGACGGCT
GCGTCCATGGGCTCTGGGACGGCCTTTCCAAATCTCTAAGTGACTACCTG
GATCTCTTACACACCCACGGGTTTAATGCGCTGCGACTCCCCTTCTCCGT
CAAGCTCGCCCTTGCCCTGGACAGCACGTACCCCAACTCTAGTTTCGTTG
CCGCAGACTCCTCACTTGCCGGCTTGAGCTGTGGGCAGATCATGGATCTA
CTGATTGTAGAATGTGGGAAGAGAGGGATTCTGGTTATGCTGGACCAGCA
CCGATTAGACCCCGAAAGAGGGATCTCGGATTTGTGGTATGATGAGGGAT
ATGAGGAGCCGGTCATCTTGAAGAGTTGGGATGTAATGGTGGGGAGGTAT
AAGAAATATTGGAACGTTTTCGCGCTTGATCTGAAAAATGAGCCGCACGG
CTCCTGTACGTGGGGGAGTGGGGAGGCCCTCACTGATTGGAAAGCGGCGA
GCGAACGAGTGATGAAGTTTATCGCTCATGCCCACCCTGATTTTTTGGGG
CTGTTCTTTGTGAGCGGGATATGGGGAGGGGGGGGGCATTGGTGGGGAGG
AAACTTCAGAGGGGTGAGGATGAAGCCAGTAGACCTTGGCGAGGAGGGGA
TGAATCGACGGGTTGTCTACACGCCCCATGTTTACGGCCCGGACGTGTAC
CCTCAGGCATATTTCTCGAGTTGGTCGTTTCCGAATAATTTGCCCGCAAT
TTGGGAGGCGCATTGGGGATTTTTGCGGGGGATGGAAGGGAGGGGCGGAG
GGGAGGGAGGGAGGGCGGTGGTGGTCAGTGAGTGGGGAGGTTTCTGTAAG
GGGAAGGATGCCAAGTGGCAGGAGAAGGTGGCGAGATATCTGTGGGAAAG
AGGGATGGCGGATAACTTTTACTGGTGGTGCGTAGGTAGGGAGAAGGAGC
GGGAGGGGCAAGGTGGCTTTGCGTGCTATATTTGCTTTGACTATCTTTGT
CTCATCCTGCAATTAAGCGCGTGATGGTGCTCGTCTGCGAGCATGTCAAC
CTCACCTTTACACTCTCTATACCACAAATACGTGCACAGTCTGAACCCTA
ACAGCGGTGACACCGGCGGGATCCTCCTGGACGACTGGACTACTCTTCAT
ATCGAAAAGCTTCGCATCCTCCACACTCTCCAGCCCGCTCCCACCCTTCT
CCGTGAGTTAGACGTCCTTCCCTCTTCACTTCCTGAAAAAGAGAACAAGA
AGGGAGAGAAGGGGAGGGAGGAGGAGAAGGAGGGGAAGGTAGTGAGGCTG
TATGAGTACCAGCTGGGGGTCGAAACGGCCGCCCTCTCCTCCACGGTAGC
TGCGGTGTCAGCTAAAAAGGTCAAGAGGTGCTTTGGCCTATTTTGAGGAG
GATTGAGGAATTTATGTGCGTGTGTCTCTATGAGGAATTTATGTGCGTGT
GTCTCTAT
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protein sequence of NO28G00810.2

>NO28G00810.2-protein ID=NO28G00810.2-protein|Name=NO28G00810.2|organism=Nannochloropsis oceanica|type=polypeptide|length=331bp
MDLLIVECGKRGILVMLDQHRLDPERGISDLWYDEGYEEPVILKSWDVMV
GRYKKYWNVFALDLKNEPHGSCTWGSGEALTDWKAASERVMKFIAHAHPD
FLGLFFVSGIWGGGGHWWGGNFRGVRMKPVDLGEEGMNRRVVYTPHVYGP
DVYPQAYFSSWSFPNNLPAIWEAHWGFLRGMEGRGGGEGGRAVVVSEWGG
FCKGKDAKWQEKVARYLWERGMADNFYWCLNPNSGDTGGILLDDWTTLHI
EKLRILHTLQPAPTLLRELDVLPSSLPEKENKKGEKGREEEKEGKVVRLY
EYQLGVETAALSSTVAAVSAKKVKRCFGLF*
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protein sequence of NO28G00810.1

>NO28G00810.1-protein ID=NO28G00810.1-protein|Name=NO28G00810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=378bp
MAHPQEDIGATNPSTKRVIGPLVWTSECHSILVNGLKVAIKGINWFGFET
TDGCVHGLWDGLSKSLSDYLDLLHTHGFNALRLPFSVKLALALDSTYPNS
SFVAADSSLAGLSCGQIMDLLIVECGKRGILVMLDQHRLDPERGISDLWY
DEGYEEPVILKSWDVMVGRYKKYWNVFALDLKNEPHGSCTWGSGEALTDW
KAASERVMKFIAHAHPDFLGLFFVSGIWGGGGHWWGGNFRGVRMKPVDLG
EEGMNRRVVYTPHVYGPDVYPQAYFSSWSFPNNLPAIWEAHWGFLRGMEG
RGGGEGGRAVVVSEWGGFCKGKDAKWQEKVARYLWERGMADNFYWWCVGR
EKEREGQGGFACYICFDYLCLILQLSA*
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Synonyms
Publications