NO28G00800, NO28G00800 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G00800 vs. NCBI_GenBank
Match: CBJ28902.1 (YihA3, YihA/EngB-like GTPase [Ectocarpus siliculosus]) HSP 1 Score: 220.7 bits (561), Expect = 7.600e-54 Identity = 121/296 (40.88%), Postives = 175/296 (59.12%), Query Frame = 0 Query: 61 DSVSETMLQDRRRHLERISEMAQETEKGEAGEEVTGGGEHMDSVILRRIRALGLGQKQRGKDTSRYRRG-PKDDAADPSEIGATGFATYMAAASGGGREGWPLFKHMLPEVAFAGHSNCGKSSLVNAVAGMAPRRGLARVSDRAGWTDAVFFYQLGKKPPVLTLADLPGYGHAVASMQQKRRWRDMTNDYFMSRKVLTLCCVLVDCVRGLCKEDQDLLESLRAKGVPVKVILTKGDLLDEVDLARSHALVVRDLQAMGLFDEEGXXXXXXXXXXDVLMVSSSTGAGVSVLWKALVE 356 DSV+++++++R +HL R+++ +D+ + + +A LG ++R + + + + S+ A GFA +M +AS +GWP F+H LPEVA AGH+NCGKS+LVNA++G+ PRRG A SDRAGWTD V FYQ+GKKPPVLT+ DLPGYGHAVA+ + W M +Y +R+ L CCVLVDC RG C+ED+ LL+ L + +P +++LTK DLL L+ L+ RDL L +E V ++GAGV+ LWK L + Sbjct: 113 DSVTDSIVKEREQHLVRLAK------------------AEVDTAMAKTFKASSLGSRKRPRQAGGFNKAYDRTGKQVHSDFAAGGFARWMGSAS----KGWPTFRHRLPEVALAGHTNCGKSTLVNALSGIHPRRGPASTSDRAGWTDLVGFYQVGKKPPVLTMVDLPGYGHAVATRHAIKGWLRMIKEYITTRQELIRCCVLVDCTRGFCEEDRALLQLLAKRNIPYQIVLTKADLLTPELLSACVLLLRRDLS--DLCGQEAGSTAPFS------AVCGTSGAGVTTLWKDLAK 378
BLAST of NO28G00800 vs. NCBI_GenBank
Match: XP_005775573.1 (GTP-binding protein [Emiliania huxleyi CCMP1516] >EOD23144.1 GTP-binding protein [Emiliania huxleyi CCMP1516]) HSP 1 Score: 167.5 bits (423), Expect = 7.700e-38 Identity = 120/327 (36.70%), Postives = 159/327 (48.62%), Query Frame = 0 Query: 43 ITTEDKLAKDSKRRRERADSVSETMLQDRRRHLERISEMAQETEKGEAGEEVTGGGEHMDSVILRRIRALGLGQKQRGKDTSR----YRRGPKDDAADPSEIGATGFATYMAAASGGGREGWPLFKHMLPEVAFAGHSNCGKSSLVNAVAGMAPRRGLARVSDRAGWTDAVFFYQLGKKPPV----------LTLADLPGYGHAVASMQQKRRWRDMTNDYFMSRKVLTLCCVLVDCVRGLCKEDQDLLESLRAKGVPVKVILTKGDLLDEVDLARSHALVVRDLQAMGLFDEEGXXXXXXXXXXDVLMVSSSTGAGVSVLWKALVE 356 +T ++L + +KRR ERADS+SE M ++R H RI+ E D +LR I L LG+++ D R R + A + E+G TG + G R G PEVA GHSNCGKS+L+NA+ G RRG A V RAGWT + FY + + L L D PGYGHAVA ++ R WRD+ Y S L L +LVDC RGLC D +L LR + VP +LTK DLL +LARSHA+V + L + +LM+SS +G+ LW+ L E Sbjct: 25 VTELEELKRRAKRRSERADSLSEQMREERVMHALRIANC-----------------EGPDPAVLREIETLKLGRRKHWHDQKRASQLKARVARRHAFEAQEVGKTG-GLALEDLDKGNRNG-------RPEVALLGHSNCGKSALLNALIGAKARRGPAEVDSRAGWTMRLHFYWARPRGLLDEAHAGSQQGLVLVDTPGYGHAVAGAKELRHWRDLIEAYVSSSPSLRLALLLVDCSRGLCAADGRVLRLLRKRRVPTFAVLTKCDLLPPAELARSHAIVSAQVDE-ALRNGAAPSRADAAPAVPLLMLSSHFYSGIDGLWERLGE 325
BLAST of NO28G00800 vs. NCBI_GenBank
Match: OUT49699.1 (hypothetical protein CBB69_02830 [Phycisphaera sp. TMED9]) HSP 1 Score: 131.3 bits (329), Expect = 6.100e-27 Identity = 106/305 (34.75%), Postives = 149/305 (48.85%), Query Frame = 0 Query: 53 SKRRRERADSVSETMLQDRRRHLERISEMAQETEKGEAGEEVTGGGEHMDSVILRRIRALGLGQKQRGKDTSRYRRGPKDDAADPSEIGATGFATYMAAASGGGREGWPLFKHMLPEVAFAGHSNCGKSSLVNAVAGMAP--RRGLARVSDRAGWTDAVFFYQLGKKPPVLTLADLPGYG-HAVASMQQKRRWRDMTNDYFMSRKVLTLCCVLVDCVRGLCKEDQDLLESLRAKGVPVKVILTKGDLLDEVD-LARSHALVVRDLQAMGLFDEEGXXXXXXXXXXDVLMVSSSTGAGVSVLWKAL 354 S+ RRER DSV +L +R ER+ ET EA + E D +R + GLG ++ GK +RR + + + +G+ F + P KH LPEV G +N GKS+L+NA+ G AP + A SDRAGWT + + ++G KPP+L + D PGYG HAVA+ +++R W + DY +R L + V+VD RG+ ED+ L+ L P V L+K DLL +AR LV D Q DV+ +TGAGV+ LW L Sbjct: 24 SRSRRERRDSVDAAVLAERAAWAERLEASPPETP--EASQR-----ELNDE---KRFKKAGLGIRRAGK-RGVFRR----EGIEAARVGSQHF-----------KGAPPPLKHALPEVLLVGAANAGKSTLINALVGAAPASKAAPASASDRAGWTSGLEWIRVGAKPPLLYVVDAPGYGAHAVATARERRDWTTLCADYARTRATLAVAVVVVDATRGVSTEDRRWLDLLS----PCIVALSKCDLLQGPGAVARCARLVEDDAQC------------------DVVATCGTTGAGVAELWARL 280
BLAST of NO28G00800 vs. NCBI_GenBank
Match: XP_012751550.1 (hypothetical protein SAMD00019534_087390 [Acytostelium subglobosum LB1] >GAM25564.1 hypothetical protein SAMD00019534_087390 [Acytostelium subglobosum LB1]) HSP 1 Score: 128.6 bits (322), Expect = 4.000e-26 Identity = 82/202 (40.59%), Postives = 108/202 (53.47%), Query Frame = 0 Query: 148 YMAAASGGGREGWPLFKHMLPEVAFAGHSNCGKSSLVNAVAGMAPRRGLARVSDRAGWTDAVFFYQLGKKPPVLTLADLPGYGHAVASMQQKRRWRDMTNDYFMSRKVLTLCCVLVDCVRGLCKEDQDLLESLRAKGVPVKVILTKGDLLDEVDLARSHALVVRDLQAMGLFDEEGXXXXXXXXXXDVLMVSSSTGAGVSVL 350 ++AAA G LPEVAF G SN GKSS++NAV +RGLA+ SD+ G+T ++ +Y+LG L L DLPGYG A A + W +T DY +RK L VLVD GL D+DLL+ L V VILTKGDL+ + DLA+ LV +L+ + E +L+VSS T G+ L Sbjct: 139 FVAAAKKSG----SFIPETLPEVAFIGRSNVGKSSIINAVT----QRGLAKTSDKPGYTQSINWYELGS---TLYLVDLPGYGFAFAKSDRVDTWNQLTVDYLTTRKTLKRVFVLVDSRHGLKDSDKDLLKILDKSQVRTHVILTKGDLVPQEDLAKRFTLVTDELRQQYHYTE-----------FPILIVSSKTYGGIPEL 318
BLAST of NO28G00800 vs. NCBI_GenBank
Match: PKA51866.1 (GTP-binding protein [Apostasia shenzhenica]) HSP 1 Score: 125.2 bits (313), Expect = 4.400e-25 Identity = 71/192 (36.98%), Postives = 104/192 (54.17%), Query Frame = 0 Query: 167 LPEVAFAGHSNCGKSSLVNAVAGMAPRRGLARVSDRAGWTDAVFFYQLGKKPPVLTLADLPGYGHAVASMQQKRRWRDMTNDYFMSRKVLTLCCVLVDCVRGLCKEDQDLLESLRAKGVPVKVILTKGDLLDEVDLARSHALVVRDLQAMGLFDEEGXXXXXXXXXXDVLMVSSSTGAGVSVLWKALVECTR 359 +PE+AFAG SN GKSSL+NA+ + G+ R SD+ G T + F++LG P L L DLPGYG A A + K W ++ +Y +R L C+LVD GL DQ+L++S+ P +++LTK DL+ +D+AR + DL+ ++MVSS +GAG+ L L + R Sbjct: 367 IPEIAFAGRSNVGKSSLMNAI---TRQWGVVRTSDKPGLTQTINFFKLG---PKLCLVDLPGYGFAYAKEEVKEAWEELVKEYVFTRTGLQRVCLLVDTKWGLKARDQELIDSMERSKTPYQIVLTKTDLVFPIDVARRAMQIQEDLK------------KNKSIVNPLMMVSSKSGAGICNLRTVLAKIAR 540
BLAST of NO28G00800 vs. NCBI_GenBank
Match: WP_107969207.1 (YihA family ribosome biogenesis GTP-binding protein [Sphingomonas sp. FW-11] >PTQ08587.1 YihA family ribosome biogenesis GTP-binding protein [Sphingomonas sp. FW-11]) HSP 1 Score: 123.2 bits (308), Expect = 1.700e-24 Identity = 72/189 (38.10%), Postives = 103/189 (54.50%), Query Frame = 0 Query: 167 LPEVAFAGHSNCGKSSLVNAVAGMAPRRGLARVSDRAGWTDAVFFYQLGKKPPVLTLADLPGYGHAVASMQQKRRWRDMTNDYFMSRKVLTLCCVLVDCVRGLCKEDQDLLESLRAKGVPVKVILTKGDLLDEVDLARSHALVVRDLQAMGLFDEEGXXXXXXXXXXDVLMVSSSTGAGVSVLWKALVE 356 +PEVAFAG SN GKSSL+NA+A R GLAR S+ G T + F+ +G +PPV L D+PGYG A A R+WR + ND+ R VL VL+D G+ D+D+++ L V +++LTK D + DLA + A V + + D+L+ SS G G++ L A++E Sbjct: 37 VPEVAFAGRSNVGKSSLLNALAN---RNGLARTSNTPGRTQELNFFDIG-EPPVFRLVDMPGYGFAKAPKDMVRKWRFLVNDFLRGRAVLKRTLVLIDSRHGIKDVDRDIMKMLDEAAVSYRLVLTKADKVKASDLAATKASVAAEART------------HVAAHPDILVTSSEKGMGIAELRAAVLE 209
BLAST of NO28G00800 vs. NCBI_GenBank
Match: KMZ57582.1 (putative GTP binding protein [Zostera marina]) HSP 1 Score: 122.1 bits (305), Expect = 3.700e-24 Identity = 69/193 (35.75%), Postives = 104/193 (53.89%), Query Frame = 0 Query: 166 MLPEVAFAGHSNCGKSSLVNAVAGMAPRRGLARVSDRAGWTDAVFFYQLGKKPPVLTLADLPGYGHAVASMQQKRRWRDMTNDYFMSRKVLTLCCVLVDCVRGLCKEDQDLLESLRAKGVPVKVILTKGDLLDEVDLARSHALVVRDLQAMGLFDEEGXXXXXXXXXXDVLMVSSSTGAGVSVLWKALVECTR 359 +LPE+AFAG SN GKSSL+NA + + G+ R SD+ G T + F++L K + + DLPGYG A A + K W ++ +Y +R L C+L+D G+ D +L+E + P +V+LTK D++ +D+AR + +DL+ M V+MVSS TGAG+ L L + R Sbjct: 375 VLPEIAFAGRSNVGKSSLMNA---LTRQWGVVRTSDKPGHTQTINFFRLASK---MCMVDLPGYGFAYAKEEVKDSWEELVKEYVSTRDGLQRVCLLIDTKWGMKTRDHELVELMERSKTPYQVVLTKTDIVFPIDVARRAMQIQQDLKTM------------KSKIDPVMMVSSKTGAGIGSLRTVLSKLAR 549
BLAST of NO28G00800 vs. NCBI_GenBank
Match: KYQ94151.1 (putative GTP-binding protein [Tieghemostelium lacteum]) HSP 1 Score: 121.3 bits (303), Expect = 6.300e-24 Identity = 65/160 (40.62%), Postives = 93/160 (58.13%), Query Frame = 0 Query: 154 GGGREGWPLFKHMLPEVAFAGHSNCGKSSLVNAVAGMAPRRGLARVSDRAGWTDAVFFYQLGKKPPVLTLADLPGYGHAVASMQQKRRWRDMTNDYFMSRKVLTLCCVLVDCVRGLCKEDQDLLESLRAKGVPVKVILTKGDLLDEVDLARSHALVVRDL 314 GG + LPEVAF G SN GKSSL+NA+ +RGLA+ SD+ G T ++ +++LG L L DLPGYG A A ++ W +T +Y +SRK L VL+D GL + D++LL + +V+LTK DL+ +VDLA+ +V D+ Sbjct: 272 GGAKSKSSFIPESLPEVAFIGRSNVGKSSLINALT----QRGLAKTSDKPGHTQSINWFELGS---TLYLVDLPGYGFAFAKSEKVDHWSQLTREYMLSRKTLKCVFVLLDSRHGLKESDRELLGIFEKNNIKSQVVLTKCDLITQVDLAKRIQIVTSDI 424
BLAST of NO28G00800 vs. NCBI_GenBank
Match: XP_024395983.1 (uncharacterized protein LOC112292077 [Physcomitrella patens] >PNR39757.1 hypothetical protein PHYPA_020037 [Physcomitrella patens]) HSP 1 Score: 120.6 bits (301), Expect = 1.100e-23 Identity = 106/340 (31.18%), Postives = 157/340 (46.18%), Query Frame = 0 Query: 36 RQRALDSITTEDKLAKDSKR--RRERADSVSETMLQDRRRHLERISEMAQETEKGEAGEEVTGGGEHMDSV----------ILRRIRALGLGQKQ----RGKDTSRYRRGPKDDAADPSEIG-----ATGFATYMAAASGGGREGWPLFKHMLPEVAFAGHSNCGKSSLVNAVAGMAPRRGLARVSDRAGWTDAVFFYQLGKKPPVLTLADLPGYGHAVASMQQKRRWRDMTNDYFMSRKVLTLCCVLVDCVRGLCKEDQDLLESLRAKGVPVKVILTKGDLLDEVDLARSHALVVRDLQAMGLFDEEGXXXXXXXXXXDVLMVSSSTGAGVSVLWKALV 355 R+R L+ ED + +R R +D ++ ++ D + +E+ + + GEE+ G + ILR I LG+++ R + P DD S+ G T F + A+ + L LPE+AFAG SN GKSSL+NA + + G+ R SD+ G T +V F+ LG + L L DLPGYG A A + K W D+ +Y +RK+L C+LVD GL D++L+E + +++LTK D+L +DLAR + L+ VLMVSS TG G+ L KALV Sbjct: 219 RRRGLEETEAEDTPSARKRRVMRLHPSDQTNKRIVDDFPT-FDLRAEVVKPKSAEKCGEEIVDGASSSQNAQFRAIQPLPEILRHIDTHLLGRRRLWEWRNGGYHIKLKAPLDDIPHGSKEGRLPIQETVFKRKLTFAA-AAKVSRSLPSLNLPEIAFAGRSNVGKSSLINA---LTRQWGVVRTSDKPGMTQSVNFFTLGSR---LCLVDLPGYGFAYAKEEAKEAWEDLVKEYVTTRKILKRVCLLVDSKWGLKPRDEELIELMENAQTKYQIVLTKTDILPPLDLARRATQIQEALK------------HHKQLILPVLMVSSQTGGGIPHLRKALV 538
BLAST of NO28G00800 vs. NCBI_GenBank
Match: XP_020430297.1 (Putative GTP-binding protein [Heterostelium album PN500] >EFA78171.1 Putative GTP-binding protein [Heterostelium album PN500]) HSP 1 Score: 119.4 bits (298), Expect = 2.400e-23 Identity = 63/167 (37.72%), Postives = 101/167 (60.48%), Query Frame = 0 Query: 148 YMAAASGGGREGWPLFKHMLPEVAFAGHSNCGKSSLVNAVAGMAPRRGLARVSDRAGWTDAVFFYQLGKKPPVLTLADLPGYGHAVASMQQKRRWRDMTNDYFMSRKVLTLCCVLVDCVRGLCKEDQDLLESLRAKGVPVKVILTKGDLLDEVDLARSHALVVRDLQ 315 ++ AS +E + LPEVAF G SN GKSS++NA+ +RG A+ SD+ G+T ++ +Y+LG L + DLPGYG A A Q+ +W +T +Y +RK L +L+D GL + D ++LE L + V +++LTKGDL+++ ++A+ LV +L+ Sbjct: 199 FVYVASAKSKESF--IPEKLPEVAFIGRSNVGKSSIINAIT----QRGQAKTSDKPGFTQSINWYELGS---TLYIVDLPGYGFAFAKSQKVDQWNQLTLEYLTTRKSLKRVFLLLDARHGLKESDHEILEILDKEHVKTQIVLTKGDLVEQKEIAKRFTLVTEELK 356 The following BLAST results are available for this feature:
BLAST of NO28G00800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00800 ID=NO28G00800|Name=NO28G00800|organism=Nannochloropsis oceanica|type=gene|length=1319bpback to top protein sequence of NO28G00800.1 >NO28G00800.1-protein ID=NO28G00800.1-protein|Name=NO28G00800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=376bpback to top Synonyms
Publications
|