NO28G00780, NO28G00780 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO28G00780
Unique Name	NO28G00780
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2151
Alignment location	chr28:259172..261322 +

Link to JBrowse

Properties


Property Name	Value
Description	Gtp-binding protein

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr28	genome	chr28:259172..261322 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding
GO:0016787	hydrolase activity
GO:0000166	nucleotide binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009000	Transl_B-barrel
IPR035647	EFG_III/V
IPR027417	P-loop_NTPase
IPR000640	EFG_V
IPR013842	LepA_GTP-bd_C
IPR004161	Transl_elong_EFTu/EF1A_2
IPR000795	TF_GTP-bd_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Homology

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BLAST of NO28G00780 vs. NCBI_GenBank
Match: EWM20919.1 (gtp-binding protein [Nannochloropsis gaditana])

HSP 1 Score: 1097.8 bits (2838), Expect = 0.000e+0
Identity = 574/694 (82.71%), Postives = 612/694 (88.18%), Query Frame = 0

Query:   19 AVEQTAGFLLPTACMSNRSRRAAAAAVASPLSFSSKHQPVPNALTRLRATTEDAKAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXAAASLAELGKYDVKRVRNFSIIAHIDHGKSTLADRLLESTKTVATRDMKAQLLDSMDIERERGITIKLNAARMLYRAKDGEDYILNLIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQTLANVYLALENDLEIIPCLNKIDLPAAEPDRVQQEIEQTVGLDCTDAVRCSAKSGIGIEEILETIVARVPPPAPPTGGPLKALIFDSYYCPYRGVVVYFRVVDGEIRPKDRVKFMASGKEYEVVEVGFMTPEKRTVDVLRAGEVGYLSAGIKSVEDARVGDTVTNAKGGASEALPGYAEAKPTVYAGLFPVDADQFEVLRESLGKLKLNDAAISFEPEKNSAMGFGFRVGFLGLLHMDIVQERLEREYNLDLIVTAPSVVYKVISNKDEELLVDSPAKLPPPTERKEIQEPYVRVEMLSPTEYTGALMELAQDKRGELKEMKYLTPTRSALIYDMPLAEVITDFFDELKSRSKGYASMEYSLTGYRENDLVKLDVRINDEEASPLACIVHRDKSYPVGKALTEKLKELIPRQMFKVPIQACIGGKVIASCAISAMRKDVLAKCYGGDVSRKKKLLQKQAKGKKRMKTMGRVAVPQEAFQAVLKLKT 713
            A E    F+ P +   + SRR AA A     S +  HQ   +AL+RL+ATTE AK  A                           A A+ AELGKYDVKRVRNFSIIAHIDHGKSTLADRLLESTKTVATRDMKAQLLDSMDIERERGITIKLNAARMLYRAKDGEDYILNLIDTPGHVDFSYEVSRSLAACEGALLVVDA+QGVEAQTLANVYLALENDLEIIP LNKIDLPAA+PDRVQ+EIEQTVGLDCT+AVR SAKSGIGI++ILE IVARVPPPAPPTGGPLKALIFDSYYCPYRGVVVYFRVVDGEIRPKDRVKFMASGKEYEVVEVGFMTPEKR V+VLRAGE               VGDT+T+A+GGAS+ALPGYAEA PTV+AGLFPVDADQFEVLRESLGKLKL+DAAISFEPEKNSAMGFGFRVGFLGLLHMDIVQERLEREYNLDLIVTAPSVVYKV++N+DEE+ +D+PAKLPP TERK I EPYVRVEML+PT+YTG+LMELAQDKRGELKEMKYLTPTR+ALIYDMPLAEVITDFFDELKSRSKGYASMEYSL GYRENDLV+LDVRINDEEA+PLACIVHRDKSY VGKALTEKLKELIPRQMFKVPIQACIGGKV+ASCA+SAMRKDVLAKCYGGDVSRKKKLLQKQAKGKKRMKTMG+V+VPQEAFQAVLKLK+
Sbjct:   85 AAEHAVSFIFPLSTSPSTSRRDAARASWRRCSRAPPHQ---SALSRLQATTEGAKVAA------KVAKDKESGDRERKDDKNKPTAMATAAELGKYDVKRVRNFSIIAHIDHGKSTLADRLLESTKTVATRDMKAQLLDSMDIERERGITIKLNAARMLYRAKDGEDYILNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENDLEIIPVLNKIDLPAADPDRVQEEIEQTVGLDCTEAVRASAKSGIGIDDILEQIVARVPPPAPPTGGPLKALIFDSYYCPYRGVVVYFRVVDGEIRPKDRVKFMASGKEYEVVEVGFMTPEKRAVEVLRAGEXXXXXXXXXXXXXXXVGDTITSARGGASDALPGYAEANPTVFAGLFPVDADQFEVLRESLGKLKLSDAAISFEPEKNSAMGFGFRVGFLGLLHMDIVQERLEREYNLDLIVTAPSVVYKVLTNRDEEISIDTPAKLPPATERKAIYEPYVRVEMLAPTDYTGSLMELAQDKRGELKEMKYLTPTRTALIYDMPLAEVITDFFDELKSRSKGYASMEYSLVGYRENDLVRLDVRINDEEATPLACIVHRDKSYAVGKALTEKLKELIPRQMFKVPIQACIGGKVVASCALSAMRKDVLAKCYGGDVSRKKKLLQKQAKGKKRMKTMGKVSVPQEAFQAVLKLKS 769

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BLAST of NO28G00780 vs. NCBI_GenBank
Match: WP_106880947.1 (elongation factor 4 [filamentous cyanobacterium CCP5] >PSN19069.1 elongation factor 4 [filamentous cyanobacterium CCP5])

HSP 1 Score: 862.4 bits (2227), Expect = 9.600e-247
Identity = 432/595 (72.61%), Postives = 508/595 (85.38%), Query Frame = 0

Query:  116 VKRVRNFSIIAHIDHGKSTLADRLLESTKTVATRDMKAQLLDSMDIERERGITIKLNAARMLYRAKDGEDYILNLIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQTLANVYLALENDLEIIPCLNKIDLPAAEPDRVQQEIEQTVGLDCTDAVRCSAKSGIGIEEILETIVARVPPPAPPTGGPLKALIFDSYYCPYRGVVVYFRVVDGEIRPKDRVKFMASGKEYEVVEVGFMTPEKRTVDVLRAGEVGYLSAGIKSVEDARVGDTVTNAKGGASEALPGYAEAKPTVYAGLFPVDADQFEVLRESLGKLKLNDAAISFEPEKNSAMGFGFRVGFLGLLHMDIVQERLEREYNLDLIVTAPSVVYKVISNKDEELLVDSPAKLPPPTERKEIQEPYVRVEMLSPTEYTGALMELAQDKRGELKEMKYLTPTRSALIYDMPLAEVITDFFDELKSRSKGYASMEYSLTGYRENDLVKLDVRINDEEASPLACIVHRDKSYPVGKALTEKLKELIPRQMFKVPIQACIGGKVIASCAISAMRKDVLAKCYGGDVSRKKKLLQKQAKGKKRMKTMGRVAVPQEAFQAVLKL 711
            V+R+RNFSIIAHIDHGKSTLADRLL+ T+TV+ RDMK Q LD+MD+ERERGITIKL AARM YRA+DG+DY+LNLIDTPGHVDFSYEVSRSLAACEGALLVVDA+QGVEAQTLANVYLALE+DLEIIP LNKIDLP AEPDR+++EIE  +GLDC+ AV  SAK GIGI+EILE+IV  VPPP   T  PL+ALIFDSYY  YRGV+VYFRV+DG I+ KDRV+ MASGKEY+V E+G ++P +  VD L AGEVGY +A IK+VEDARVGDT+T  K  A+EALPGY EAKP V+ GLFP DADQFE LRE+L +L+L+DAA+ +EPE +SAMGFGFR GFLGLLHM+IVQERLEREYNLDLI TAPSV+Y+V +   E +LVD+P  LP P ER++I+EPYVR++M++P E+ G LMEL Q +RG+ K+MKYL   R++LIY++PLAEV+TDFF+++KSRSKGYASMEY L GYR N LVKLDV IN E A PLA IVHRDK+Y VGKAL EKLKELIPR  FK+PIQA IG ++IAS +I A+RKDVLAKCYGGD+SRKKKLLQKQAKGKKR+K++G V VPQEAF AVLKL
Sbjct:    6 VQRIRNFSIIAHIDHGKSTLADRLLQKTETVSDRDMKEQFLDTMDLERERGITIKLQAARMKYRARDGQDYVLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALEHDLEIIPVLNKIDLPGAEPDRIKKEIEDIIGLDCSAAVLASAKQGIGIDEILESIVYLVPPPQDTTNKPLRALIFDSYYDSYRGVIVYFRVMDGAIKKKDRVRLMASGKEYDVDELGILSPNQIEVDELHAGEVGYFAASIKAVEDARVGDTITLVKPAATEALPGYVEAKPMVFCGLFPTDADQFEELREALERLRLSDAALRYEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLDLITTAPSVIYQVTTVDGEVVLVDNPCLLPSPQEREKIEEPYVRLDMITPEEFVGPLMELCQSRRGDFKDMKYLAQNRTSLIYEVPLAEVVTDFFNQMKSRSKGYASMEYHLIGYRANHLVKLDVMINGEVADPLASIVHRDKAYYVGKALVEKLKELIPRHQFKIPIQAAIGSRIIASESIPALRKDVLAKCYGGDISRKKKLLQKQAKGKKRLKSLGTVDVPQEAFMAVLKL 600

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BLAST of NO28G00780 vs. NCBI_GenBank
Match: WP_017288267.1 (elongation factor 4 [Leptolyngbya boryana] >BAS57135.1 GTP-binding protein LepA [Leptolyngbya boryana IAM M-101] >BAS63483.1 GTP-binding protein LepA [Leptolyngbya boryana dg5] >BAY56677.1 GTP-binding protein LepA [Leptolyngbya boryana NIES-2135])

HSP 1 Score: 862.1 bits (2226), Expect = 1.200e-246
Identity = 431/595 (72.44%), Postives = 503/595 (84.54%), Query Frame = 0

Query:  116 VKRVRNFSIIAHIDHGKSTLADRLLESTKTVATRDMKAQLLDSMDIERERGITIKLNAARMLYRAKDGEDYILNLIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQTLANVYLALENDLEIIPCLNKIDLPAAEPDRVQQEIEQTVGLDCTDAVRCSAKSGIGIEEILETIVARVPPPAPPTGGPLKALIFDSYYCPYRGVVVYFRVVDGEIRPKDRVKFMASGKEYEVVEVGFMTPEKRTVDVLRAGEVGYLSAGIKSVEDARVGDTVTNAKGGASEALPGYAEAKPTVYAGLFPVDADQFEVLRESLGKLKLNDAAISFEPEKNSAMGFGFRVGFLGLLHMDIVQERLEREYNLDLIVTAPSVVYKVISNKDEELLVDSPAKLPPPTERKEIQEPYVRVEMLSPTEYTGALMELAQDKRGELKEMKYLTPTRSALIYDMPLAEVITDFFDELKSRSKGYASMEYSLTGYRENDLVKLDVRINDEEASPLACIVHRDKSYPVGKALTEKLKELIPRQMFKVPIQACIGGKVIASCAISAMRKDVLAKCYGGDVSRKKKLLQKQAKGKKRMKTMGRVAVPQEAFQAVLKL 711
            V R+RNFSIIAHIDHGKSTLADRLL+ T TV  R+MK Q LDSMD+ERERGITIKL AARM Y AKDG+ Y+LNLIDTPGHVDFSYEVSRSLAACEGALLVVDA+QGVEAQTLANVYLALE+DLEIIP LNKIDLP AEPDRV+QEIE  VGLDC++A+  SAK GIG+ +ILE IV +VPPPA  T  P +ALIFDSYY  YRGV+VYFRVVDG+++  D+V  MASGKEY++ E+G ++P +  VD L AGEVGY +A IK+VEDARVGDT+T +   ASE LPGY EAKP V+ G+FP DADQF  LRE+L KLKLNDAA++FEPE +SAMGFGFR GFLGLLHM+IVQERLEREYNLDLI+TAPSVVY+V + K E +L+D+P KLP PTER++I+EPYV+V++++P  Y G LMEL Q++RG  K+MKYLTP R+ LIY++PLAEV+TDFFD++KSRS+GYASMEY L GYREN LVKLD+ IN +    LA IVHRDK+Y VG+ALTEKL+ELIPR  FK+PIQA IG KVIAS  I A+RKDVLAKCYGGD+SRKKKLLQKQAKGKKRMK +G V VPQEAF AVL+L
Sbjct:    6 VNRIRNFSIIAHIDHGKSTLADRLLQETGTVTAREMKEQFLDSMDLERERGITIKLQAARMNYTAKDGQQYVLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALEHDLEIIPVLNKIDLPGAEPDRVRQEIEDVVGLDCSEAIMASAKEGIGVPDILEAIVQKVPPPADTTNDPFRALIFDSYYDAYRGVIVYFRVVDGQVKKGDKVYLMASGKEYQIDELGVLSPTQVQVDSLHAGEVGYFAASIKAVEDARVGDTITLSAKKASEPLPGYIEAKPMVFCGMFPTDADQFPELREALDKLKLNDAALNFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLDLIITAPSVVYRVTTIKGEVVLIDNPGKLPSPTEREKIEEPYVQVDIITPETYVGTLMELCQNRRGVFKDMKYLTPGRTTLIYELPLAEVVTDFFDQMKSRSRGYASMEYQLIGYRENALVKLDIMINGDPVDSLATIVHRDKAYGVGRALTEKLRELIPRHQFKIPIQAAIGSKVIASEHIPALRKDVLAKCYGGDISRKKKLLQKQAKGKKRMKAIGTVDVPQEAFMAVLRL 600

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BLAST of NO28G00780 vs. NCBI_GenBank
Match: WP_068379071.1 (elongation factor 4 [Leptolyngbya sp. NIES-3755] >BAU09677.1 GTP-binding protein lepA [Leptolyngbya sp. NIES-3755])

HSP 1 Score: 860.1 bits (2221), Expect = 4.700e-246
Identity = 430/595 (72.27%), Postives = 504/595 (84.71%), Query Frame = 0

Query:  116 VKRVRNFSIIAHIDHGKSTLADRLLESTKTVATRDMKAQLLDSMDIERERGITIKLNAARMLYRAKDGEDYILNLIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQTLANVYLALENDLEIIPCLNKIDLPAAEPDRVQQEIEQTVGLDCTDAVRCSAKSGIGIEEILETIVARVPPPAPPTGGPLKALIFDSYYCPYRGVVVYFRVVDGEIRPKDRVKFMASGKEYEVVEVGFMTPEKRTVDVLRAGEVGYLSAGIKSVEDARVGDTVTNAKGGASEALPGYAEAKPTVYAGLFPVDADQFEVLRESLGKLKLNDAAISFEPEKNSAMGFGFRVGFLGLLHMDIVQERLEREYNLDLIVTAPSVVYKVISNKDEELLVDSPAKLPPPTERKEIQEPYVRVEMLSPTEYTGALMELAQDKRGELKEMKYLTPTRSALIYDMPLAEVITDFFDELKSRSKGYASMEYSLTGYRENDLVKLDVRINDEEASPLACIVHRDKSYPVGKALTEKLKELIPRQMFKVPIQACIGGKVIASCAISAMRKDVLAKCYGGDVSRKKKLLQKQAKGKKRMKTMGRVAVPQEAFQAVLKL 711
            V R+RNFSIIAHIDHGKSTLADRLL+ T TV  RDMK Q LD+M++ERERGITIKL AARM Y AKDG+ Y+LNLIDTPGHVDFSYEVSRSLAACEGALLVVDA+QGVEAQTLANVYLALE+DLEIIP LNKIDLP AEPDRV+QEIE+ +GLDCTDA+  SAK GIG+ +ILE IV +VPPP   T  PL+ALIFDSYY  YRGV+VYFRV+DG+++  D+V  MASGKEY++ E+G ++P +  VD L AGEVGY +A IK+VEDARVGDT+T +   A+E LPGY EAKP V+ G+FP DADQF  LRE+L KLKLNDAA++FEPE +SAMGFGFR GFLGLLHM+IVQERLEREYNLDLI+TAPSVVY+V + K + LL+D+P KLP PTER++I+EPYV+V++++P  Y G LMEL Q++RG  K+MKYLTP R+ LIY++PLAEV+TDFFD++KSRS+GYASMEY L GYREN LVKLDV IN +    LA IVHRDK+Y VG+ALTEKL+ELIPR  FK+PIQA IG KVIAS  I A+RKDVLAKCYGGD+SRKKKLLQKQAKGKKRMK +G V VPQEAF AVL+L
Sbjct:    6 VNRIRNFSIIAHIDHGKSTLADRLLQETGTVTARDMKEQFLDNMELERERGITIKLQAARMNYTAKDGQQYVLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALEHDLEIIPVLNKIDLPGAEPDRVKQEIEEVIGLDCTDAIMASAKEGIGVPDILEAIVQKVPPPKDTTQEPLRALIFDSYYDAYRGVIVYFRVMDGQLKKGDKVYLMASGKEYQIDELGVLSPTQVQVDSLHAGEVGYFAASIKAVEDARVGDTITLSAKKAAEPLPGYIEAKPMVFCGMFPTDADQFPELREALDKLKLNDAALNFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLDLIITAPSVVYRVTTIKGDVLLIDNPGKLPSPTEREKIEEPYVQVDIITPETYVGTLMELCQNRRGVFKDMKYLTPGRTTLIYELPLAEVVTDFFDQMKSRSRGYASMEYQLIGYRENALVKLDVLINGDPVDSLATIVHRDKAYGVGRALTEKLRELIPRHQFKIPIQAAIGSKVIASEHIPALRKDVLAKCYGGDISRKKKLLQKQAKGKKRMKAIGTVDVPQEAFMAVLRL 600

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BLAST of NO28G00780 vs. NCBI_GenBank
Match: WP_018399444.1 (elongation factor 4 [filamentous cyanobacterium ESFC-1])

HSP 1 Score: 857.8 bits (2215), Expect = 2.400e-245
Identity = 426/597 (71.36%), Postives = 503/597 (84.25%), Query Frame = 0

Query:  116 VKRVRNFSIIAHIDHGKSTLADRLLESTKTVATRDMKAQLLDSMDIERERGITIKLNAARMLYRAKDGEDYILNLIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQTLANVYLALENDLEIIPCLNKIDLPAAEPDRVQQEIEQTVGLDCTDAVRCSAKSGIGIEEILETIVARVPPPAPPTGGPLKALIFDSYYCPYRGVVVYFRVVDGEIRPKDRVKFMASGKEYEVVEVGFMTPEKRTVDVLRAGEVGYLSAGIKSVEDARVGDTVTNAKGGASEALPGYAEAKPTVYAGLFPVDADQFEVLRESLGKLKLNDAAISFEPEKNSAMGFGFRVGFLGLLHMDIVQERLEREYNLDLIVTAPSVVYKVISNKDEELLVDSPAKLPPPTERKEIQEPYVRVEMLSPTEYTGALMELAQDKRGELKEMKYLTPTRSALIYDMPLAEVITDFFDELKSRSKGYASMEYSLTGYRENDLVKLDVRINDEEASPLACIVHRDKSYPVGKALTEKLKELIPRQMFKVPIQACIGGKVIASCAISAMRKDVLAKCYGGDVSRKKKLLQKQAKGKKRMKTMGRVAVPQEAFQAVLKLKT 713
            V R+RNFSIIAHIDHGKSTLADRLL+ T TVA R MK Q LDSMD+ERERGITIKL AARM Y AK+GE Y+LNLIDTPGHVDFSYEVSRSLAACEGALLVVDA+QGVEAQTLANVYLALENDLEIIP LNKIDLP A+PDRV +EIE+ +GLDCTDA+R SAK GIG++EILE IV  VPPP      PL+ALIFDSYY PYRGV+VYFRV+DG ++  DRV+ MAS KEY + E+G ++P +  +D L AGEVGY SA IK+VEDARVGDT+T A   A  ALPGY EAKP V+ GLFP D++Q+E LR++L KLKLNDAA+S+EPE ++AMGFGFR GFLGLLHM+IVQERLEREYNLDLI TAPSV+Y+V +   E    D+P++LPPP  R+ I+EPYVR+EM++P EY G LMEL Q +RGE K+MKYLTPTR+ L+Y++PLAEV+TDFF++LKSRS+GYASMEY + GYRENDLV+LDV +N +    LA IVHRDK+YPVG++LTEKLKELIPR  FK+P+QA IG ++IAS  I A+RKDVLAKCYGGD+SRKKKLLQKQAKGKKRMK++G V VPQEAF AVL+L++
Sbjct:    6 VSRIRNFSIIAHIDHGKSTLADRLLQVTGTVAQRKMKEQFLDSMDLERERGITIKLQAARMDYTAKNGEKYVLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENDLEIIPVLNKIDLPGADPDRVIEEIEEVIGLDCTDAIRASAKQGIGVDEILEAIVKEVPPPQDTVEEPLRALIFDSYYDPYRGVIVYFRVMDGCVKQGDRVRLMASKKEYAIDELGILSPGQIPIDTLHAGEVGYFSAAIKAVEDARVGDTITLATEPAETALPGYTEAKPMVFCGLFPTDSEQYEDLRDALEKLKLNDAALSYEPETSTAMGFGFRCGFLGLLHMEIVQERLEREYNLDLITTAPSVIYRVTTTSGETFEFDNPSQLPPPGNREIIEEPYVRIEMITPEEYVGTLMELCQARRGEFKDMKYLTPTRTTLVYELPLAEVVTDFFNQLKSRSRGYASMEYQILGYRENDLVRLDVMVNGDPVDSLATIVHRDKAYPVGRSLTEKLKELIPRHQFKIPLQASIGSRIIASEHIPALRKDVLAKCYGGDISRKKKLLQKQAKGKKRMKSIGTVDVPQEAFMAVLRLES 602

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BLAST of NO28G00780 vs. NCBI_GenBank
Match: WP_014277517.1 (elongation factor 4 [Arthrospira platensis] >BAI94349.1 GTP-binding protein LepA [Arthrospira platensis NIES-39])

HSP 1 Score: 855.9 bits (2210), Expect = 8.900e-245
Identity = 431/595 (72.44%), Postives = 497/595 (83.53%), Query Frame = 0

Query:  116 VKRVRNFSIIAHIDHGKSTLADRLLESTKTVATRDMKAQLLDSMDIERERGITIKLNAARMLYRAKDGEDYILNLIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQTLANVYLALENDLEIIPCLNKIDLPAAEPDRVQQEIEQTVGLDCTDAVRCSAKSGIGIEEILETIVARVPPPAPPTGGPLKALIFDSYYCPYRGVVVYFRVVDGEIRPKDRVKFMASGKEYEVVEVGFMTPEKRTVDVLRAGEVGYLSAGIKSVEDARVGDTVTNAKGGASEALPGYAEAKPTVYAGLFPVDADQFEVLRESLGKLKLNDAAISFEPEKNSAMGFGFRVGFLGLLHMDIVQERLEREYNLDLIVTAPSVVYKVISNKDEELLVDSPAKLPPPTERKEIQEPYVRVEMLSPTEYTGALMELAQDKRGELKEMKYLTPTRSALIYDMPLAEVITDFFDELKSRSKGYASMEYSLTGYRENDLVKLDVRINDEEASPLACIVHRDKSYPVGKALTEKLKELIPRQMFKVPIQACIGGKVIASCAISAMRKDVLAKCYGGDVSRKKKLLQKQAKGKKRMKTMGRVAVPQEAFQAVLKL 711
            V R+RNFSIIAHIDHGKSTLADRLL+ T TVA R MK Q LDSMDIERERGITIKL AARM Y AKDG+ Y+LNLIDTPGHVDFSYEVSRSLAACEGALLVVDA+QGVEAQTLANVYLALENDLEIIP LNKIDLP AEP+RV  EIE+ +GLDC++A+R SAK GIGIEEILE+IV  VPPP       L+ALIFDSYY  YRGV+VYFRV+DG ++  DRV+ MASGKEYEV E+G + P +  VD L AGEVGYL A IK+VEDARVGDT+T AK  A   LPGY EAKP V+ GLFP+DADQF  LRE+L +LKLNDA++S+EPE +SAMGFGFR GFLGLLHM+IVQERLEREY+LDLIVT+PSVVY+V +N  E L++D+P+KLP P  R++I+EPYVRVEM++P  + G LMELAQ +RG+ K+MKYLT  R+ L+Y++PLAEV+TDFFD++KSRS+GYASMEY   GYR+N LVKLD+ IN +    LA IVHRDK+Y VG+ + EKLKELIPR  FKVPIQA IG KVIAS  I A+RKDVLAKCYGGD+SRKKKLLQKQAKGKKRMK +G V VPQEAF AVLKL
Sbjct:    6 VTRIRNFSIIAHIDHGKSTLADRLLQQTGTVADRQMKEQFLDSMDIERERGITIKLQAARMNYTAKDGQQYVLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENDLEIIPVLNKIDLPGAEPERVAGEIEEIIGLDCSEAIRASAKEGIGIEEILESIVKLVPPPKDTVSEKLRALIFDSYYDSYRGVIVYFRVMDGTVKKGDRVRLMASGKEYEVDELGVLAPTQTPVDELHAGEVGYLGAAIKAVEDARVGDTITMAKNQADSPLPGYTEAKPMVFCGLFPIDADQFPDLREALDRLKLNDASLSYEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYDLDLIVTSPSVVYRVTTNTGEVLMIDNPSKLPEPNHREKIEEPYVRVEMITPETFVGTLMELAQGRRGDFKDMKYLTMGRTTLVYEVPLAEVVTDFFDQMKSRSRGYASMEYHFVGYRQNPLVKLDIMINKDTVDSLAMIVHRDKAYNVGRGMAEKLKELIPRHQFKVPIQAAIGSKVIASEHIPALRKDVLAKCYGGDISRKKKLLQKQAKGKKRMKALGSVDVPQEAFMAVLKL 600

[Close]

BLAST of NO28G00780 vs. NCBI_GenBank
Match: WP_015165004.1 (elongation factor 4 [Pseudanabaena sp. PCC 7367] >AFY70038.1 GTP-binding protein lepA [Pseudanabaena sp. PCC 7367])

HSP 1 Score: 855.5 bits (2209), Expect = 1.200e-244
Identity = 416/593 (70.15%), Postives = 511/593 (86.17%), Query Frame = 0

Query:  118 RVRNFSIIAHIDHGKSTLADRLLESTKTVATRDMKAQLLDSMDIERERGITIKLNAARMLYRAKDGEDYILNLIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQTLANVYLALENDLEIIPCLNKIDLPAAEPDRVQQEIEQTVGLDCTDAVRCSAKSGIGIEEILETIVARVPPPAPPTGGPLKALIFDSYYCPYRGVVVYFRVVDGEIRPKDRVKFMASGKEYEVVEVGFMTPEKRTVDVLRAGEVGYLSAGIKSVEDARVGDTVTNAKGGASEALPGYAEAKPTVYAGLFPVDADQFEVLRESLGKLKLNDAAISFEPEKNSAMGFGFRVGFLGLLHMDIVQERLEREYNLDLIVTAPSVVYKVISNKDEELLVDSPAKLPPPTERKEIQEPYVRVEMLSPTEYTGALMELAQDKRGELKEMKYLTPTRSALIYDMPLAEVITDFFDELKSRSKGYASMEYSLTGYRENDLVKLDVRINDEEASPLACIVHRDKSYPVGKALTEKLKELIPRQMFKVPIQACIGGKVIASCAISAMRKDVLAKCYGGDVSRKKKLLQKQAKGKKRMKTMGRVAVPQEAFQAVLKL 711
            R+RNFSIIAHIDHGKSTLADRLL+ T TVA R+MK Q LD++D+ERERGITIKL AARM Y AKDG++Y+LNLIDTPGHVDFSYEVSRSLAACEGALLVVDA+QGVEAQT+ANVYLALENDLEIIP LNKIDLP AEPDRV +EIEQ +GLDC++A+  SAK GIG+ EILE IVA+VPPPA  T  PL+ALIFDSYY PYRGV+VYFRV+DG ++  DRVKFMASG+EY++ E+G ++P +  VD L AGEVGYL+A IK+VE ARVGDT+T A   A++ LPGY EAKP V+ G+FP+DADQFE LRE+L K KLNDAA+++EPE +SAMGFGFR GFLGLLHM+IVQERLEREYNL+LI+TAPSVVY+V +NKDE LL+D+P++LPPP  R++I+EPYVR++M++P E+ GALMEL + +RG+ K+MKY+T  R++LIY++PLAE++TDFF+++KSR+KGYASMEY + GYR NDLVKLD+ +N+E    LACIVHRDK+Y +G+ L  KLK+LIPRQ FK+P+QA IG KV++   I A+RK+VL+KCYGGD+SRKKKLL+KQ +GKKRMK +G V VPQEAF A+LKL
Sbjct:    8 RIRNFSIIAHIDHGKSTLADRLLQVTGTVADREMKEQFLDTLDLERERGITIKLQAARMNYTAKDGQEYVLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTMANVYLALENDLEIIPVLNKIDLPGAEPDRVAEEIEQVIGLDCSEAILASAKEGIGVNEILEAIVAQVPPPADTTEEPLRALIFDSYYDPYRGVIVYFRVMDGNLKKGDRVKFMASGQEYDIDEIGVLSPVQIQVDQLHAGEVGYLAAAIKTVEHARVGDTITLANHPATKPLPGYVEAKPMVFCGMFPIDADQFEDLREALEKFKLNDAALNYEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLNLIITAPSVVYQVTTNKDEVLLIDNPSELPPPMLREKIEEPYVRLDMMTPQEHIGALMELCETRRGDFKDMKYITQDRASLIYEIPLAEIVTDFFNQMKSRTKGYASMEYHIIGYRPNDLVKLDILVNEEPVDSLACIVHRDKAYQMGRGLVSKLKQLIPRQQFKIPVQAAIGSKVLSRENIPALRKNVLSKCYGGDISRKKKLLEKQKEGKKRMKAIGTVEVPQEAFMAILKL 600

[Close]

BLAST of NO28G00780 vs. NCBI_GenBank
Match: WP_009767723.1 (elongation factor 4 [Oscillatoriales cyanobacterium JSC-12] >EKQ68610.1 GTP-binding protein LepA [Oscillatoriales cyanobacterium JSC-12])

HSP 1 Score: 852.4 bits (2201), Expect = 9.900e-244
Identity = 428/595 (71.93%), Postives = 503/595 (84.54%), Query Frame = 0

Query:  116 VKRVRNFSIIAHIDHGKSTLADRLLESTKTVATRDMKAQLLDSMDIERERGITIKLNAARMLYRAKDGEDYILNLIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQTLANVYLALENDLEIIPCLNKIDLPAAEPDRVQQEIEQTVGLDCTDAVRCSAKSGIGIEEILETIVARVPPPAPPTGGPLKALIFDSYYCPYRGVVVYFRVVDGEIRPKDRVKFMASGKEYEVVEVGFMTPEKRTVDVLRAGEVGYLSAGIKSVEDARVGDTVTNAKGGASEALPGYAEAKPTVYAGLFPVDADQFEVLRESLGKLKLNDAAISFEPEKNSAMGFGFRVGFLGLLHMDIVQERLEREYNLDLIVTAPSVVYKVISNKDEELLVDSPAKLPPPTERKEIQEPYVRVEMLSPTEYTGALMELAQDKRGELKEMKYLTPTRSALIYDMPLAEVITDFFDELKSRSKGYASMEYSLTGYRENDLVKLDVRINDEEASPLACIVHRDKSYPVGKALTEKLKELIPRQMFKVPIQACIGGKVIASCAISAMRKDVLAKCYGGDVSRKKKLLQKQAKGKKRMKTMGRVAVPQEAFQAVLKL 711
            V R+RNFSIIAHIDHGKSTLADRLL++T TV  R+MK Q LD+M++ERERGITIKL AARM Y A+DG+ Y+LNLIDTPGHVDFSYEVSRSLAACEGALLVVDA+QGVEAQTLANVYLALE++LEIIP LNKIDLP AEPDRV++EIE  +GLDC+ A+  SAK GIGI EILE+IV  VPPP      PL+ALIFDSYY PYRGV+VYFRV+DG+++  DRV+ MASGKEY++ E+G ++P +  VD L AGEVGY++A IK+VEDARVGDT+T A   A E LPGY EAKP V+ GLFP DADQFE LRE+L KLKL+DAA+++EPE +SAMGFGFR GFLGLLHM+IVQERLEREYNLDLI TAPSVVY+V + K E L +D+P+KLP P  R++++EPYV+V++++P  Y G LMELAQ +RG  K+MKYLTP R+ LIY++PLAEV TDFFD++KSRS+GYASMEY L GYREN LVKLD+ IN +   PLA IVHRDK+Y VG+ALTEKLKELIPR  FK+PIQA IG KVIAS  I A+RKDVLAKCYGGD+SRKKKLLQKQAKGKKRMK++G V VPQEAF AVLKL
Sbjct:    6 VSRIRNFSIIAHIDHGKSTLADRLLQATGTVDAREMKEQFLDNMELERERGITIKLQAARMNYTAQDGQHYVLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALEHNLEIIPVLNKIDLPGAEPDRVKKEIEDIIGLDCSQAILASAKEGIGIPEILESIVHLVPPPQDTINQPLRALIFDSYYDPYRGVIVYFRVMDGKVKQGDRVRLMASGKEYQIDELGVLSPNQVRVDELHAGEVGYIAAAIKAVEDARVGDTITLATAPAPEPLPGYVEAKPMVFCGLFPTDADQFEDLREALEKLKLSDAALNYEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLDLITTAPSVVYRVTTIKGEVLYIDNPSKLPDPQYREKMEEPYVQVDIITPETYVGTLMELAQSRRGVFKDMKYLTPERTTLIYELPLAEVATDFFDQMKSRSRGYASMEYQLIGYRENPLVKLDIMINGDPVDPLATIVHRDKAYSVGRALTEKLKELIPRHQFKIPIQAAIGAKVIASEHIPALRKDVLAKCYGGDISRKKKLLQKQAKGKKRMKSIGTVDVPQEAFMAVLKL 600

[Close]

BLAST of NO28G00780 vs. NCBI_GenBank
Match: WP_006455883.1 (elongation factor 4 [Synechococcus sp. PCC 7335] >EDX86124.1 GTP-binding protein LepA [Synechococcus sp. PCC 7335])

HSP 1 Score: 852.4 bits (2201), Expect = 9.900e-244
Identity = 422/595 (70.92%), Postives = 507/595 (85.21%), Query Frame = 0

Query:  116 VKRVRNFSIIAHIDHGKSTLADRLLESTKTVATRDMKAQLLDSMDIERERGITIKLNAARMLYRAKDGEDYILNLIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQTLANVYLALENDLEIIPCLNKIDLPAAEPDRVQQEIEQTVGLDCTDAVRCSAKSGIGIEEILETIVARVPPPAPPTGGPLKALIFDSYYCPYRGVVVYFRVVDGEIRPKDRVKFMASGKEYEVVEVGFMTPEKRTVDVLRAGEVGYLSAGIKSVEDARVGDTVTNAKGGASEALPGYAEAKPTVYAGLFPVDADQFEVLRESLGKLKLNDAAISFEPEKNSAMGFGFRVGFLGLLHMDIVQERLEREYNLDLIVTAPSVVYKVISNKDEELLVDSPAKLPPPTERKEIQEPYVRVEMLSPTEYTGALMELAQDKRGELKEMKYLTPTRSALIYDMPLAEVITDFFDELKSRSKGYASMEYSLTGYRENDLVKLDVRINDEEASPLACIVHRDKSYPVGKALTEKLKELIPRQMFKVPIQACIGGKVIASCAISAMRKDVLAKCYGGDVSRKKKLLQKQAKGKKRMKTMGRVAVPQEAFQAVLKL 711
            V R+RNFSIIAHIDHGKSTLADRLL+ T TV+ RDMKAQ LDSMDIERERGITIKL AARM Y AKDGE Y+LNLIDTPGHVDF+YEVSRSLAACEGALLVVDA+QGVEAQTLANVYLA+ENDLE+IP LNK+DLP A+P+RV+QEIE+ VGLDC++AV  SAK GIGI EILE+I   VP PA  T  P++ALIFDSYY  YRGV+VYFRV+DG IR +DR++ MASGKEY++ E+G ++P +  VD L AGEVGY++A IKSVEDARVGDT+T  K  A E L GY EAKP V+ GLFP D+DQ+E LRE+L KL+LNDAA+ +EPE +SAMGFGFR GFLGLLHM+IVQERLEREYNLDLI TAPSV+Y+V + + E + VD+P+ LP P  R++I+EPYV+V++++P E+ G LMEL Q +RG+ ++MKYLTP R+ L+Y++PLAEV+TDFFD++KSRS+GYASMEY L GYREN+LVKLDV+IN +   PLA IVHRDK+Y VG+ALTEKLKELIPR  FK+P+QA IG ++IAS +I A+RKDVLAKCYGGD+SRKKKLL+KQAKGKKR+K++G V VPQEAF AVLKL
Sbjct:    6 VSRLRNFSIIAHIDHGKSTLADRLLQETGTVSARDMKAQFLDSMDIERERGITIKLQAARMRYTAKDGEQYVLNLIDTPGHVDFTYEVSRSLAACEGALLVVDASQGVEAQTLANVYLAIENDLEVIPVLNKVDLPGADPERVKQEIEEVVGLDCSNAVMASAKEGIGITEILESITYLVPSPADNTQAPVRALIFDSYYDSYRGVIVYFRVMDGAIRSRDRIRLMASGKEYDIDELGVLSPNQVPVDELHAGEVGYIAASIKSVEDARVGDTITLVKTPAEEPLAGYIEAKPMVFCGLFPTDSDQYEDLREALDKLRLNDAALQYEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLDLITTAPSVIYRVYTVQGEVIEVDNPSLLPEPQYREKIEEPYVKVDIITPEEFVGTLMELCQTRRGDFQDMKYLTPGRTTLVYELPLAEVVTDFFDQMKSRSRGYASMEYQLIGYRENNLVKLDVKINGDTVDPLAAIVHRDKAYYVGRALTEKLKELIPRHQFKIPVQASIGSRIIASESIPALRKDVLAKCYGGDISRKKKLLKKQAKGKKRLKSIGTVDVPQEAFMAVLKL 600

[Close]

BLAST of NO28G00780 vs. NCBI_GenBank
Match: WP_027845941.1 (elongation factor 4 [Mastigocoleus testarum] >KST64937.1 GTP-binding protein LepA [Mastigocoleus testarum BC008] >KST65014.1 GTP-binding protein LepA [Mastigocoleus testarum BC008])

HSP 1 Score: 852.0 bits (2200), Expect = 1.300e-243
Identity = 427/593 (72.01%), Postives = 497/593 (83.81%), Query Frame = 0

Query:  118 RVRNFSIIAHIDHGKSTLADRLLESTKTVATRDMKAQLLDSMDIERERGITIKLNAARMLYRAKDGEDYILNLIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQTLANVYLALENDLEIIPCLNKIDLPAAEPDRVQQEIEQTVGLDCTDAVRCSAKSGIGIEEILETIVARVPPPAPPTGGPLKALIFDSYYCPYRGVVVYFRVVDGEIRPKDRVKFMASGKEYEVVEVGFMTPEKRTVDVLRAGEVGYLSAGIKSVEDARVGDTVTNAKGGASEALPGYAEAKPTVYAGLFPVDADQFEVLRESLGKLKLNDAAISFEPEKNSAMGFGFRVGFLGLLHMDIVQERLEREYNLDLIVTAPSVVYKVISNKDEELLVDSPAKLPPPTERKEIQEPYVRVEMLSPTEYTGALMELAQDKRGELKEMKYLTPTRSALIYDMPLAEVITDFFDELKSRSKGYASMEYSLTGYRENDLVKLDVRINDEEASPLACIVHRDKSYPVGKALTEKLKELIPRQMFKVPIQACIGGKVIASCAISAMRKDVLAKCYGGDVSRKKKLLQKQAKGKKRMKTMGRVAVPQEAFQAVLKL 711
            R+RNF IIAHIDHGKSTLADRLL+ T TV +R MK Q LD+MD+ERERGITIKL AARM Y AKD ++Y+LNLIDTPGHVDFSYEVSRSL ACEGALLVVDA+QGVEAQTLANVYLA+ENDLEIIP LNKIDLP AEPDRV  EIE+ +GLDC+ A+  SAK GIG++EILE IV RVPPP   T   L+ALIFDSYY  YRGV+VYFRV+DG ++  DR+  MASGKEYE+ E+G ++P ++ VD L AGEVGYLSA IK+VEDARVGDT+T AK  A+E LPGYAEA P V+ G+FP+DADQF+ LRE+L KLKLNDAA+ FEPE +SAMGFGFR GFLGLLHM+IVQERLEREYNLDLI+TAPSVVYKV + K EE+ +D+P+ LP P ER++I+EPYVRVEM++P  Y G LMEL Q +RG  K+MKYLT  R+ L Y++PLAEV+TDFFD++KSRS+GYASMEY L GYREN LVKLD+ IN +    LA IVHRDK+Y VG+++ EKLKELIPR  FKVPIQA IG KVIAS  I A+RKDVLAKCYGGD+SRKKKLLQKQAKGKKRMK++G V VPQEAF AVL+L
Sbjct:    8 RIRNFCIIAHIDHGKSTLADRLLQMTNTVESRQMKEQFLDNMDLERERGITIKLQAARMNYTAKDDQNYVLNLIDTPGHVDFSYEVSRSLVACEGALLVVDASQGVEAQTLANVYLAIENDLEIIPVLNKIDLPGAEPDRVAAEIEEIIGLDCSGAILASAKEGIGVDEILEAIVERVPPPKDTTDEKLRALIFDSYYDTYRGVIVYFRVMDGTLKKGDRIYLMASGKEYEIDEIGVLSPNQKPVDELHAGEVGYLSAAIKAVEDARVGDTITLAKNKAAEPLPGYAEANPMVFCGMFPIDADQFKDLREALDKLKLNDAALQFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLDLIITAPSVVYKVTTIKGEEVFIDNPSHLPSPNERQKIEEPYVRVEMIAPETYVGTLMELGQGRRGIFKDMKYLTQGRTTLTYELPLAEVVTDFFDQMKSRSRGYASMEYHLIGYRENPLVKLDLMINGDPVDSLAMIVHRDKAYAVGRSMAEKLKELIPRHQFKVPIQAAIGSKVIASEHIPALRKDVLAKCYGGDISRKKKLLQKQAKGKKRMKSVGTVDVPQEAFMAVLRL 600

The following BLAST results are available for this feature:

BLAST of NO28G00780 vs. NCBI_GenBank

BLAST of NO28G00780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM20919.1	0.000e+0	82.71	gtp-binding protein [Nannochloropsis gaditana]	[more]
WP_106880947.1	9.600e-247	72.61	elongation factor 4 [filamentous cyanobacterium CC...	[more]
WP_017288267.1	1.200e-246	72.44	elongation factor 4 [Leptolyngbya boryana] >BAS571...	[more]
WP_068379071.1	4.700e-246	72.27	elongation factor 4 [Leptolyngbya sp. NIES-3755] >...	[more]
WP_018399444.1	2.400e-245	71.36	elongation factor 4 [filamentous cyanobacterium ES...	[more]
WP_014277517.1	8.900e-245	72.44	elongation factor 4 [Arthrospira platensis] >BAI94...	[more]
WP_015165004.1	1.200e-244	70.15	elongation factor 4 [Pseudanabaena sp. PCC 7367] >...	[more]
WP_009767723.1	9.900e-244	71.93	elongation factor 4 [Oscillatoriales cyanobacteriu...	[more]
WP_006455883.1	9.900e-244	70.92	elongation factor 4 [Synechococcus sp. PCC 7335] >...	[more]
WP_027845941.1	1.300e-243	72.01	elongation factor 4 [Mastigocoleus testarum] >KST6...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL059	nonsL059	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR054	ncniR054	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR094	ngnoR094	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK004875	NSK004875	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO28G00780.1	NO28G00780.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|659230	gene_9180	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
lepA	gene9496	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO28G00780.1	NO28G00780.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO28G00780 ID=NO28G00780|Name=NO28G00780|organism=Nannochloropsis oceanica|type=gene|length=2151bp
ATGAGGCGGCAAACTTCCCAGATTATTCTTCCCCTCGTTCTCCTGACGCT
GCTAGCGGTGGAGCAGACGGCGGGCTTTCTCCTTCCCACTGCTTGCATGA
GCAACAGGAGCAGAAGAGCCGCTGCCGCTGCTGTTGCCTCCCCCCTGTCC
TTCTCATCAAAACATCAGCCCGTCCCCAACGCCCTAACCCGCCTTCGTGC
CACCACTGAAGATGCCAAGGCTGTTGCCGCGGCTTCCAACAAGGCGAAAG
CCGTCAAGGACAAGGAGGCAGCGGAGCGGGAGAAGAAGGAGGAGAAAAAC
AAGCCGACCGCGGCGGCTTCGCTGGCGGAGCTAGGCAAGTACGACGTTAA
ACGTGTACGAAACTTCAGTATTATTGCACATATTGACCATGGAAAGAGCA
CGTTGGCGGATCGATTGTTGGAGAGTACGAAGACGGTGGCGACGAGGGAC
ATGAAGGCGCAGCTTTTGGATAGCATGGACATCGAGCGCGAACGAGGTAT
TACCATCAAGCTCAACGCGGCGCGCATGCTCTACCGCGCAAAAGATGGGG
AGGATTACATTTTGAACCTTATTGACACGCCCGGCCATGTGGACTTTTCC
TACGAAGTTTCCCGCTCCCTCGCCGCCTGTGAGGGGGCGTTGCTTGTGGT
GGATGCAGCGCAAGGCGTCGAGGCTCAAACACTCGCCAACGTCTACCTTG
CTCTGGAAAACGACCTGGAAATCATTCCCTGCCTCAATAAAATAGACCTC
CCCGCCGCGGAGCCCGATCGAGTGCAGCAAGAGATCGAGCAGACCGTGGG
CTTGGACTGCACGGACGCCGTGCGTTGCTCGGCCAAGAGCGGGATTGGGA
TTGAAGAAATTCTGGAGACAATTGTGGCACGTGTTCCTCCTCCAGCACCT
CCCACTGGAGGGCCGCTCAAGGCACTGATTTTCGACAGCTATTATTGTCC
GTATCGGGGCGTGGTGGTGTACTTCCGGGTAGTGGATGGCGAGATCCGGC
CGAAGGACCGCGTGAAGTTCATGGCGTCGGGGAAGGAGTACGAGGTAGTG
GAGGTGGGCTTCATGACGCCCGAGAAACGAACCGTAGACGTGCTGAGAGC
CGGGGAGGTGGGCTACCTCTCCGCGGGGATCAAGTCGGTGGAGGACGCCA
GGGTGGGGGACACGGTGACCAACGCCAAGGGGGGGGCTTCGGAGGCGCTG
CCGGGGTACGCCGAGGCCAAGCCCACGGTGTACGCGGGGCTCTTTCCTGT
GGACGCGGACCAGTTCGAGGTGCTGAGGGAGAGCCTGGGGAAGTTGAAGC
TGAACGACGCGGCCATCTCGTTCGAGCCGGAGAAGAACTCGGCCATGGGC
TTCGGCTTCCGCGTCGGCTTCTTGGGCCTCTTGCACATGGATATCGTGCA
GGAGAGGCTGGAGAGGGAGTACAACCTAGACCTGATCGTAACGGCGCCCT
CAGTCGTCTACAAGGTCATCTCGAACAAAGACGAGGAGCTTCTAGTAGAC
TCGCCGGCAAAGCTGCCCCCGCCAACGGAGCGAAAGGAGATCCAAGAGCC
GTACGTGAGAGTGGAGATGCTTTCTCCCACTGAATACACGGGAGCCTTAA
TGGAGCTGGCGCAAGATAAGAGGGGGGAGCTGAAAGAGATGAAATACCTG
ACGCCCACCCGGTCGGCCCTGATCTACGACATGCCCTTGGCGGAGGTGAT
CACTGACTTTTTCGATGAGCTAAAGAGTCGGAGCAAGGGGTACGCGAGCA
TGGAGTACAGCCTCACTGGCTACAGGGAGAATGACCTTGTCAAACTAGAT
GTGAGAATCAATGACGAGGAAGCCTCGCCCTTGGCCTGCATCGTCCACAG
AGATAAGAGCTACCCGGTTGGGAAGGCTCTCACGGAAAAGCTGAAGGAGT
TAATTCCGCGGCAGATGTTCAAGGTCCCGATCCAGGCATGCATTGGAGGC
AAGGTGATCGCGTCCTGTGCTATCTCAGCCATGAGGAAAGACGTTCTGGC
CAAGTGCTACGGCGGCGATGTAAGCCGGAAGAAGAAGCTGCTCCAGAAGC
AGGCTAAAGGGAAAAAGAGGATGAAGACCATGGGCAGGGTGGCGGTGCCC
CAGGAGGCGTTCCAGGCCGTGCTGAAGCTCAAGACGGGCCCGCAGAAGTA
G

protein sequence of NO28G00780.1

>NO28G00780.1-protein ID=NO28G00780.1-protein|Name=NO28G00780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=717bp
MRRQTSQIILPLVLLTLLAVEQTAGFLLPTACMSNRSRRAAAAAVASPLS
FSSKHQPVPNALTRLRATTEDAKAVAAASNKAKAVKDKEAAEREKKEEKN
KPTAAASLAELGKYDVKRVRNFSIIAHIDHGKSTLADRLLESTKTVATRD
MKAQLLDSMDIERERGITIKLNAARMLYRAKDGEDYILNLIDTPGHVDFS
YEVSRSLAACEGALLVVDAAQGVEAQTLANVYLALENDLEIIPCLNKIDL
PAAEPDRVQQEIEQTVGLDCTDAVRCSAKSGIGIEEILETIVARVPPPAP
PTGGPLKALIFDSYYCPYRGVVVYFRVVDGEIRPKDRVKFMASGKEYEVV
EVGFMTPEKRTVDVLRAGEVGYLSAGIKSVEDARVGDTVTNAKGGASEAL
PGYAEAKPTVYAGLFPVDADQFEVLRESLGKLKLNDAAISFEPEKNSAMG
FGFRVGFLGLLHMDIVQERLEREYNLDLIVTAPSVVYKVISNKDEELLVD
SPAKLPPPTERKEIQEPYVRVEMLSPTEYTGALMELAQDKRGELKEMKYL
TPTRSALIYDMPLAEVITDFFDELKSRSKGYASMEYSLTGYRENDLVKLD
VRINDEEASPLACIVHRDKSYPVGKALTEKLKELIPRQMFKVPIQACIGG
KVIASCAISAMRKDVLAKCYGGDVSRKKKLLQKQAKGKKRMKTMGRVAVP
QEAFQAVLKLKTGPQK*

Synonyms

Publications