NO28G00770, NO28G00770 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G00770 vs. NCBI_GenBank
Match: EWM20913.1 (Protein of unknown function DUF1499 [Nannochloropsis gaditana]) HSP 1 Score: 311.2 bits (796), Expect = 3.700e-81 Identity = 155/223 (69.51%), Postives = 184/223 (82.51%), Query Frame = 0 Query: 84 QSNDKGLSRERYLRWSSTTTAFLLAAATGVTF-APRATHARTQPLGVIDELLAECPTEKSCTSSQDDRPPVFQEPWQYDDSTQEKAMRRLKAYVESMPGVEVITAEEGYLRADLTEGGKINEIEFYFTPNDSIIQFRAARRGEGDDKGANQKRMEKMRIALGFEKIPVLRNRRRALFFLESPLDGWGPSYRDDAPSPEELQSQQAYKDNDPKSPEWGKPSPYP 306 +S+ G+ R++YLR +S F A T +T PRAT AR PLGVID+LLAECPTEKSC SSQDDRPPVFQEPW+Y+D+TQEKAMRRL++YVE++PG E I+AE+ YLR ++ E G I++ EFYFTPNDSIIQFR+ARRG+G D+GANQKRMEK+RIALGFEKIPVLRNRRRALFFLESPLDGWGPSYR+DAP PE+L QAY D+DP +P W P PYP Sbjct: 81 RSHSHGIPRDQYLRLTSAAGNFF--ATTILTIQTPRATQARLLPLGVIDQLLAECPTEKSCASSQDDRPPVFQEPWEYEDATQEKAMRRLRSYVENLPGAETISAEDRYLRFEIKEDGNIDDTEFYFTPNDSIIQFRSARRGDGRDRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGPSYREDAPRPEDL--DQAYGDSDPLAPGWEAPPPYP 299
BLAST of NO28G00770 vs. NCBI_GenBank
Match: CBN77020.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 152.1 bits (383), Expect = 2.900e-33 Identity = 87/215 (40.47%), Postives = 122/215 (56.74%), Query Frame = 0 Query: 69 RESKRHPRSPIMMAAQSNDKGLSR-------ERYLRWSSTTTAFLLAAATGVTFAPRATHARTQPLGVIDELLAECPTEKSCTSSQDDRPPVFQEPWQYDDSTQEKAMRRLKAYVESMPGVEVITAEEGYLRADLTE----GGKINEIEFYFTPNDSIIQFRAARRGEGDDKGANQKRMEKMRIALGFEKIPVLRNRRRALFFLESPLDGWGPSY 273 R ++ SP + A Q G S + + + + F A + + LGV+D+LLA+CP+ +C SSQDDRP F EPW Y D E++M RL+ Y+E G +VI + YLR + +++ EFYFTP D+++QFR ARR D GAN++RM+ +R AL FE IPVLRNR+RALFF ESP+D +GPS+ Sbjct: 59 RSARDCAESPDVCAMQQGTAGASGLSATLPVDAAVTRTEALSGFFQAVLLSTAVLANPPDSNSDGLGVVDDLLADCPSTPTCVSSQDDRPYPFMEPWSY-DGPFERSMSRLRNYLE-FNGAKVIASSPRYLRVEFEAVNAIPASVDDAEFYFTPGDALVQFRCARRNGPTDFGANRRRMDGIRQALKFESIPVLRNRKRALFFGESPIDSFGPSF 271
BLAST of NO28G00770 vs. NCBI_GenBank
Match: XP_005760391.1 (hypothetical protein EMIHUDRAFT_106310 [Emiliania huxleyi CCMP1516] >EOD07962.1 hypothetical protein EMIHUDRAFT_106310 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 142.1 bits (357), Expect = 3.000e-30 Identity = 80/185 (43.24%), Postives = 112/185 (60.54%), Query Frame = 0 Query: 131 DELLAECPTEKSCTSSQDDRPPVFQEPWQYDDSTQEKAMRRLKAYVESMPGVEVITAEEGYLRADLTE----GGKINEIEFYFTPNDSIIQFRAARRGEGDDKGANQKRMEKMRIALGFEKIPVLRNRRRALFFLESPLDGWGP-SYRDDAPS-------PEELQSQQAYKDNDPKSPEWGKPSP 304 D + ++C C SSQDDRP V+ PW + + AM RL+ +E +V+ +E YLRA+ G +++ EF+FTP+D ++QFRAARRG+ D GAN+KR+E+ RIALG+EK+ VLRNRRRAL +ESP D +GP +Y D P E ++ Y D DP + W KP+P Sbjct: 33 DGIFSDC--SGFCVSSQDDRPAVWDNPWVAEQAL-PSAMERLRRVIELKLQGKVVEQDERYLRAEFASRGPLGDAVDDAEFFFTPDDVLVQFRAARRGDAPDFGANRKRLERARIALGWEKVEVLRNRRRALVVVESPFDSFGPATYERDELGFTNRDLVPAEANQKELYGDLDPLAAPWRKPTP 214
BLAST of NO28G00770 vs. NCBI_GenBank
Match: CEM27118.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 140.6 bits (353), Expect = 8.700e-30 Identity = 75/150 (50.00%), Postives = 101/150 (67.33%), Query Frame = 0 Query: 127 LGVIDELLAECPT-EKSCTSSQDDRPPVFQEPWQYDDSTQEKAMRRLKAYVESMPGVEV--ITAEEGYLRADLTEG--GKINEIEFYFTPNDSIIQFRAARRGEGDDKGANQKRMEKMRIALGFEKIPVLRNRRRALFFLESPLDGWGPS 272 LGV +LL+ CP SC SSQDDRP FQEPW Y++ + MRRLKA + +P V+V + + E YLR ++ + ++++EFY TP D+ +QFRAARR D G N++R+E +RIALG EK+PVLR RR +F ESPLD +GPS Sbjct: 116 LGVDQDLLSYCPDGSSSCVSSQDDRPAFFQEPWMYEEIEPDMLMRRLKAALALLPKVQVKQVVSSERYLRVEIADETLKTVDDVEFYLTPGDNTVQFRAARRDSLPDFGVNRRRLESIRIALGLEKVPVLR-YRRTIFPWESPLDQFGPS 264
BLAST of NO28G00770 vs. NCBI_GenBank
Match: OAE25430.1 (hypothetical protein AXG93_2818s1070 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 110.9 bits (276), Expect = 7.400e-21 Identity = 61/149 (40.94%), Postives = 90/149 (60.40%), Query Frame = 0 Query: 127 LGVIDELLAECPTEKSCTSSQDDRPPVFQEPWQYDDSTQEKAMRRLKAYVESMPGVEVITAEEGYLRADL--TEGGKINEIEFYFT--PNDSIIQFRAARRGEGD-DKGANQKRMEKMRIALGFEKIPVLRNRRRALFFLESPLDGWGP 271 +GV+DE L C + +C SS DDRP F PW++ + A+ LK + SM + EE Y+ A E G I+++EF F+ D+ + RAA R +G DK N++R+E++R +L +E++P+LRNR R LFFLESP D +GP Sbjct: 170 IGVVDETLGTCNSTPNCVSSFDDRPNFFVAPWEFPGQLSD-AVNALKETLSSMGADIIAEPEERYVHAKFIDKEDGVIDDVEFLFSNPSEDATVVIRAASRAQGTADKARNRERLERIRSSLTWEEVPILRNRSRTLFFLESPWDSFGP 317
BLAST of NO28G00770 vs. NCBI_GenBank
Match: PTQ42260.1 (hypothetical protein MARPO_0030s0012 [Marchantia polymorpha]) HSP 1 Score: 110.9 bits (276), Expect = 7.400e-21 Identity = 61/149 (40.94%), Postives = 90/149 (60.40%), Query Frame = 0 Query: 127 LGVIDELLAECPTEKSCTSSQDDRPPVFQEPWQYDDSTQEKAMRRLKAYVESMPGVEVITAEEGYLRADL--TEGGKINEIEFYFT--PNDSIIQFRAARRGEGD-DKGANQKRMEKMRIALGFEKIPVLRNRRRALFFLESPLDGWGP 271 +GV+DE L C + +C SS DDRP F PW++ + A+ LK + SM + EE Y+ A E G I+++EF F+ D+ + RAA R +G DK N++R+E++R +L +E++P+LRNR R LFFLESP D +GP Sbjct: 170 IGVVDETLGTCNSTPNCVSSFDDRPNFFVAPWEFPGQLSD-AVNALKETLSSMGADIIAEPEERYVHAKFIDKEDGVIDDVEFLFSNPSEDATVVIRAASRAQGTADKARNRERLERIRSSLTWEEVPILRNRSRTLFFLESPWDSFGP 317
BLAST of NO28G00770 vs. NCBI_GenBank
Match: PNH12254.1 (hypothetical protein TSOC_000844, partial [Tetrabaena socialis]) HSP 1 Score: 110.5 bits (275), Expect = 9.600e-21 Identity = 58/150 (38.67%), Postives = 93/150 (62.00%), Query Frame = 0 Query: 127 LGVIDELLAECPTEKSCTSSQDDRPPVFQEPWQYDDSTQEKAMRRLKAYVESMPGVEVITA---EEGYLRADLTEGGK-INEIEFYFTPNDSIIQFR-AARRGEGDDKGANQKRMEKMRIALGFEKIPVLRNRRRALFFLESPLDGWGPS 272 +GV+D L C ++C S+ DDRP F PW YD++T++ A+ ++ VE+ G A GY+ A + G + +++EF D+ + R AAR +G D G N++R+E++R+ALG+E +P+LRNR+R L F+ESP D +GP+ Sbjct: 1 IGVVDGTLGSCAGWRACLSTFDDRPGHFVAPWTYDEATRQAAVSQIVEAVEAQGGAVRQAANYESYGYVYATFSSGWQGTDDVEFLLPDADNTVVLRSAARAPDGLDLGRNERRLEQLRVALGWEPVPILRNRQRTLLFVESPWDSFGPT 150
BLAST of NO28G00770 vs. NCBI_GenBank
Match: XP_002177859.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50673.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 110.2 bits (274), Expect = 1.300e-20 Identity = 88/252 (34.92%), Postives = 124/252 (49.21%), Query Frame = 0 Query: 74 HPRSPIMMAAQSNDKGLSRERYLRWSSTTTAFLL------AAATGVTFAPRATHARTQPLGVIDELLAECP------TEKSCTSSQDDRPPVFQEPWQYDDSTQ---EKAMRRLKAYVESM-----PGVEVITAEEGYLRADLTEG--GKINEIEFYFTPNDSIIQFRAARRGEGDDKG-----ANQKRMEKMRIALGFEKIPVLRNRRRALFFLESPLDGWGPSYRDDAPSPE----ELQSQQAYKDNDPK 295 HP+ ++ SN+ +++ R +SST L ++A T T LGV D LLA+CP CTSSQDD P F EPW Y +S + MR+L ++++ V V+ E YLR T+G G+ + EFYFTP+D+ +QFR A N +R E +R + + K+PVLRNRRRALFF+ES +D +GP P E EL+ +Q D DP+ Sbjct: 41 HPQGTLL----SNNAAVNQRRRTLFSSTAATLGLLGCGTPSSAVVETVGKDPTCNDGTCLGVWDGLLADCPHGMAGKQGAGCTSSQDDTPGTFSEPWDYSESDSLDWQHQMRKLLPVIQAVSAKRGDSVRVLLQENRYLRVAFTDGRSGETSTGEFYFTPDDTTVQFRIASLESSSTSPFTPSLRNIERAELLRKEMRYLKLPVLRNRRRALFFVESEVDTFGPGSAALGPPAEMRTGELEGRQ---DIDPR 285
BLAST of NO28G00770 vs. NCBI_GenBank
Match: GAQ84922.1 (hypothetical protein KFL_002120160 [Klebsormidium nitens]) HSP 1 Score: 109.4 bits (272), Expect = 2.100e-20 Identity = 63/148 (42.57%), Postives = 93/148 (62.84%), Query Frame = 0 Query: 127 LGVIDELLAECPTEKSCTSSQDDRPPVFQEPWQYDDSTQEKAMRRLKAYVESMPGVEVITAEEGYLRAD-LTEGGKINEIEFYF--TPNDSIIQFRAARRG-EGDDKGANQKRMEKMRIALGFEKIPVLRNRRRALFFLESPLDGWGP 271 +GV+D+ LA C + +C SS DDRPP F PW+Y S E A+R L+ +E + G V A++ Y+ A + E G I+++E+ F + +D I+Q AA R E D G N R+EK+R L +E++P+LRNR R +F+ESP D +GP Sbjct: 85 IGVVDDTLASCGSITNCVSSFDDRPPFFCAPWEYPASLPE-AVRTLEQQIERLGGT-VNEAQQKYVYATFVDEDGVIDDVEWLFSDSASDRIVQIHAASRAREQPDGGRNATRLEKIRAGLQWEQVPILRNRVRKFYFIESPWDTFGP 230
BLAST of NO28G00770 vs. NCBI_GenBank
Match: XP_002289235.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92772.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 106.3 bits (264), Expect = 1.800e-19 Identity = 73/179 (40.78%), Postives = 97/179 (54.19%), Query Frame = 0 Query: 127 LGVIDELLAECPTEKS---------CTSSQDDRPPVFQEPWQYDD--STQEKAMRRLKAYVESM-----PGVEVITAEEGYLRADLTEG--GKINEIEFYFTPNDSIIQFRAA-----RRGEGDDKGANQKRMEKMRIALGFEKIPVLRNRRRALFFLESPLDGWGPSYRDDAPSPEEL 283 LGV D LLA+CP + C SSQDD P +F EPW Y D + E+ M L +++ V+V YLR T+G G+ + EFYFTPND I+QFR A G +N +R E++R +L + K+PVLRNR+R LFF+ES LD +GP P PEE+ Sbjct: 35 LGVWDGLLADCPHGTNNLFGSGGAGCVSSQDDTPGIFAEPWDYSDENTDYERQMGMLLLALQTASKQHGDQVKVDVQSGRYLRVFFTDGSSGETSVGEFYFTPNDYIVQFRIASTSQMTAGLVGRSLSNMERSERVRKSLRYLKVPVLRNRKRTLFFVESDLDAFGPGSAALGP-PEEM 212 The following BLAST results are available for this feature:
BLAST of NO28G00770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00770 ID=NO28G00770|Name=NO28G00770|organism=Nannochloropsis oceanica|type=gene|length=1132bpback to top protein sequence of NO28G00770.1 >NO28G00770.1-protein ID=NO28G00770.1-protein|Name=NO28G00770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=325bpback to top Synonyms
Publications
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