NO28G00760, NO28G00760 (gene) Nannochloropsis oceanica

Overview
NameNO28G00760
Unique NameNO28G00760
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1656
Alignment locationchr28:255715..257370 +

Link to JBrowse

Properties
Property NameValue
DescriptionPropionyl-CoA carboxylase beta chain
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr28genomechr28:255715..257370 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016874ligase activity
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR029045ClpP/crotonase-like_dom
IPR011762COA_CT_N
IPR011763COA_CT_C
IPR034733AcCoA_carboxyl
Homology
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BLAST of NO28G00760 vs. NCBI_GenBank
Match: EWM20922.1 (carboxyl transferase [Nannochloropsis gaditana])

HSP 1 Score: 956.1 bits (2470), Expect = 4.900e-275
Identity = 474/551 (86.03%), Postives = 512/551 (92.92%), Query Frame = 0 
Query:    3 AILSPRLRLTQLLLRQSNSTLVRQQ--QSFSSKIKAVADRPSVVTLKNAFRVRLEEERAKALQGGGEKRVAKQHAKGKLTARERLSLLLDEGSFRESDMLKTHRCTDFGMQDEMYPGDGVVTGWGTVNGRPVYVFSQDFTVFGGSLSETHAQKICKIMDKAVQSGVPVIGLNDSGGARIQEGVDSLGGYAEVFQRNVNASGVVPQISLVMGPCAGGAVYSPAMTDFIFMVRRTSYMFVTGPDVVRTVTQEEISQEELGGAETHTTMSGVAHCAFDNDIEALRATRLLLDFLPLNSREKPPAVHTEDSRHRQEPCLRYLCPDDPNHPYDMAEVVKKVVDEGNFFEIMPGFAKNIVTGFARLEGHPVAIVANNPAHLAGCLDINSSVKAGRFVRFADAFNIPIVTFVDVPGFLPGVDQEHNGIIRNGAKLLFAYAEATVPKVTVITRKAYGGAYDVMSSKHLRGDANFAWPGAEIAVMGAKGAVGIIFRGKDVEANTLKYTDRFANPMVAAQRGYIDEVIDPACTRQHLCKELEILRNKKVENPHRKHSNVPL 552
            A +  R   T   LRQ  + +  QQ  +  SSK+KAV  +PSVVTLKNAFRVRLE+ERAKALQGGGEKRVAKQHAKGKLTARERLSLLLDEG+FRESDMLKTHRCTDFGMQ E+YPGDGVVTGWGT++GRPVYVFSQDFTVFGGSLSETHAQKICK+M+KA+QSGVPVIGLNDSGGARIQEGVDSLGGYAEVFQRNV ASGVVPQISLV+GPCAGGAVYSPAMTDFIFMVRRTSYMFVTGPDVV+TVTQE ISQEELGGA+THT+MSGVAHCAFDN++EA+RATRLLL +LPLNSR+KPP+V T DSR+RQE CLRYLCPDDPNHPY+M EVVKKVVDEG  FEIMP FA+NI TGFAR+EGHPVA++ANNPAHLAGCLDI+SSVKA RFVRFADAFN+PI+TFVDVPGFLPGVDQEH+GIIRNGAKLLFAYAEATVPKVTVITRKAYGGAYDVMSSKHLRGDANFAWPGAEIAVMG KGAV IIFRGKDVEANTL+YT+RFANPMVAA RGYIDEVIDPA TRQHLC+ELE+LRNK VENP RKHSNVPL
Sbjct:    8 ATILSRFPSTHQTLRQVRTRVHLQQVLRPLSSKVKAVNHQPSVVTLKNAFRVRLEDERAKALQGGGEKRVAKQHAKGKLTARERLSLLLDEGTFRESDMLKTHRCTDFGMQKEVYPGDGVVTGWGTIDGRPVYVFSQDFTVFGGSLSETHAQKICKVMEKAMQSGVPVIGLNDSGGARIQEGVDSLGGYAEVFQRNVLASGVVPQISLVLGPCAGGAVYSPAMTDFIFMVRRTSYMFVTGPDVVKTVTQEAISQEELGGADTHTSMSGVAHCAFDNELEAIRATRLLLGYLPLNSRQKPPSVQTADSRYRQEACLRYLCPDDPNHPYEMREVVKKVVDEGEVFEIMPAFAQNIFTGFARMEGHPVAVIANNPAHLAGCLDIDSSVKAARFVRFADAFNLPILTFVDVPGFLPGVDQEHSGIIRNGAKLLFAYAEATVPKVTVITRKAYGGAYDVMSSKHLRGDANFAWPGAEIAVMGPKGAVEIIFRGKDVEANTLEYTERFANPMVAAARGYIDEVIDPAMTRQHLCEELEVLRNKSVENPPRKHSNVPL 558
[Close]
BLAST of NO28G00760 vs. NCBI_GenBank
Match: XP_008909815.1 (propionyl-CoA carboxylase beta chain, mitochondrial [Phytophthora parasitica INRA-310] >ETI40344.1 propionyl-CoA carboxylase beta chain, mitochondrial [Phytophthora parasitica P1569] >ETK80444.1 propionyl-CoA carboxylase beta chain, mitochondrial [Phytophthora parasitica] >ETL33872.1 propionyl-CoA carboxylase beta chain, mitochondrial [Phytophthora parasitica] >ETL87143.1 propionyl-CoA carboxylase beta chain, mitochondrial [Phytophthora parasitica] >ETM40343.1 propionyl-CoA carboxylase beta chain, mitochondrial [Phytophthora parasitica] >ETN04878.1 propionyl-CoA carboxylase beta chain, mitochondrial [Phytophthora parasitica INRA-310] >ETO69065.1 propionyl-CoA carboxylase beta chain, mitochondrial [Phytophthora parasitica P1976] >ETP10177.1 propionyl-CoA carboxylase beta chain, mitochondrial [Phytophthora parasitica CJ01A1] >ETP38276.1 propionyl-CoA carboxylase beta chain, mitochondrial [Phytophthora parasitica P10297])

HSP 1 Score: 746.9 bits (1927), Expect = 4.500e-212
Identity = 354/505 (70.10%), Postives = 425/505 (84.16%), Query Frame = 0 
Query:   47 KNAFRVRLEEERAKALQGGGEKRVAKQHAKGKLTARERLSLLLDEGSFRESDMLKTHRCTDFGMQDEMYPGDGVVTGWGTVNGRPVYVFSQDFTVFGGSLSETHAQKICKIMDKAVQSGVPVIGLNDSGGARIQEGVDSLGGYAEVFQRNVNASGVVPQISLVMGPCAGGAVYSPAMTDFIFMVRRTSYMFVTGPDVVRTVTQEEISQEELGGAETHTTMSGVAHCAFDNDIEALRATRLLLDFLPLNSREKPPAVHTEDSRHRQEPCLRYLCPDDPNHPYDMAEVVKKVVDEGNFFEIMPGFAKNIVTGFARLEGHPVAIVANNPAHLAGCLDINSSVKAGRFVRFADAFNIPIVTFVDVPGFLPGVDQEHNGIIRNGAKLLFAYAEATVPKVTVITRKAYGGAYDVMSSKHLRGDANFAWPGAEIAVMGAKGAVGIIFRGKDVEANTLKYTDRFANPMVAAQRGYIDEVIDPACTRQHLCKELEILRNKKVENPHRKHSNVPL 552
            K AF+  LE+ R +AL+GGG +RVAKQH KGKLTARER+ LLLD+G+FRE DMLK+HRC+DFGM+ + YPGDGVVTG G +NGR  +VFSQDFTVFGGSLSET+A+KI KIM KA++ G PVIGLNDSGGARIQEGV SL GYA++FQ NV ASGV+PQ+++VMGPCAGGAVYSPAMTD+IFM R +SYMFVTGPDVV+TVT EE++QEELGGA THT  SGVAHCAFDND+EA+R  R   DFLPLN++EKPP   ++D R+R  P L  + P DPN PY+M +++ ++VD  +FFEIMP +AKNI+ GF R+EG  V I+AN P  LAGCLDINSSVK  RFVRF DAFNIPIVT VDVPGFLPG DQE+ GIIR+GAKLL+AYAEATVPK+T+ITRKAYGGAYDVMSSKHLRGD N+AWP AEIAVMGAKGAV IIFRG++VE NT  Y  +FANPMVAAQRG++D++I+P  TR+H+C++L++L  K V+NP +KH N+PL
Sbjct:   38 KLAFKEELEQARKRALEGGGAERVAKQHEKGKLTARERIELLLDKGTFREYDMLKSHRCSDFGMEKQQYPGDGVVTGRGLINGRLTFVFSQDFTVFGGSLSETYAEKIVKIMQKAMELGAPVIGLNDSGGARIQEGVASLAGYADIFQLNVLASGVIPQLTMVMGPCAGGAVYSPAMTDYIFMCRDSSYMFVTGPDVVKTVTNEEVTQEELGGAATHTKTSGVAHCAFDNDVEAIREMRRFFDFLPLNNKEKPPVRTSDDDRNRPVPTLESIVPPDPNVPYNMKDIIHQIVDSFDFFEIMPDYAKNIIVGFGRMEGRVVGILANQPMELAGCLDINSSVKGARFVRFCDAFNIPIVTLVDVPGFLPGTDQEYGGIIRHGAKLLYAYAEATVPKITIITRKAYGGAYDVMSSKHLRGDINYAWPSAEIAVMGAKGAVEIIFRGQNVEENTADYEKKFANPMVAAQRGFVDDIIEPVNTRRHICEDLDVLETKDVKNPWKKHGNIPL 542
[Close]
BLAST of NO28G00760 vs. NCBI_GenBank
Match: KUF76905.1 (Propionyl-CoA carboxylase beta chain [Phytophthora nicotianae])

HSP 1 Score: 746.9 bits (1927), Expect = 4.500e-212
Identity = 354/505 (70.10%), Postives = 425/505 (84.16%), Query Frame = 0 
Query:   47 KNAFRVRLEEERAKALQGGGEKRVAKQHAKGKLTARERLSLLLDEGSFRESDMLKTHRCTDFGMQDEMYPGDGVVTGWGTVNGRPVYVFSQDFTVFGGSLSETHAQKICKIMDKAVQSGVPVIGLNDSGGARIQEGVDSLGGYAEVFQRNVNASGVVPQISLVMGPCAGGAVYSPAMTDFIFMVRRTSYMFVTGPDVVRTVTQEEISQEELGGAETHTTMSGVAHCAFDNDIEALRATRLLLDFLPLNSREKPPAVHTEDSRHRQEPCLRYLCPDDPNHPYDMAEVVKKVVDEGNFFEIMPGFAKNIVTGFARLEGHPVAIVANNPAHLAGCLDINSSVKAGRFVRFADAFNIPIVTFVDVPGFLPGVDQEHNGIIRNGAKLLFAYAEATVPKVTVITRKAYGGAYDVMSSKHLRGDANFAWPGAEIAVMGAKGAVGIIFRGKDVEANTLKYTDRFANPMVAAQRGYIDEVIDPACTRQHLCKELEILRNKKVENPHRKHSNVPL 552
            K AF+  LE+ R +AL+GGG +RVAKQH KGKLTARER+ LLLD+G+FRE DMLK+HRC+DFGM+ + YPGDGVVTG G +NGR  +VFSQDFTVFGGSLSET+A+KI KIM KA++ G PVIGLNDSGGARIQEGV SL GYA++FQ NV ASGV+PQ+++VMGPCAGGAVYSPAMTD+IFM R +SYMFVTGPDVV+TVT EE++QEELGGA THT  SGVAHCAFDND+EA+R  R   DFLPLN++EKPP   ++D R+R  P L  + P DPN PY+M +++ ++VD  +FFEIMP +AKNI+ GF R+EG  V I+AN P  LAGCLDINSSVK  RFVRF DAFNIPIVT VDVPGFLPG DQE+ GIIR+GAKLL+AYAEATVPK+T+ITRKAYGGAYDVMSSKHLRGD N+AWP AEIAVMGAKGAV IIFRG++VE NT  Y  +FANPMVAAQRG++D++I+P  TR+H+C++L++L  K V+NP +KH N+PL
Sbjct:   19 KLAFKEELEQARKRALEGGGAERVAKQHEKGKLTARERIELLLDKGTFREYDMLKSHRCSDFGMEKQQYPGDGVVTGRGLINGRLTFVFSQDFTVFGGSLSETYAEKIVKIMQKAMELGAPVIGLNDSGGARIQEGVASLAGYADIFQLNVLASGVIPQLTMVMGPCAGGAVYSPAMTDYIFMCRDSSYMFVTGPDVVKTVTNEEVTQEELGGAATHTKTSGVAHCAFDNDVEAIREMRRFFDFLPLNNKEKPPVRTSDDDRNRPVPTLESIVPPDPNVPYNMKDIIHQIVDSFDFFEIMPDYAKNIIVGFGRMEGRVVGILANQPMELAGCLDINSSVKGARFVRFCDAFNIPIVTLVDVPGFLPGTDQEYGGIIRHGAKLLYAYAEATVPKITIITRKAYGGAYDVMSSKHLRGDINYAWPSAEIAVMGAKGAVEIIFRGQNVEENTADYEKKFANPMVAAQRGFVDDIIEPVNTRRHICEDLDVLETKDVKNPWKKHGNIPL 523
[Close]
BLAST of NO28G00760 vs. NCBI_GenBank
Match: XP_009519986.1 (hypothetical protein PHYSODRAFT_353994 [Phytophthora sojae] >EGZ24698.1 hypothetical protein PHYSODRAFT_353994 [Phytophthora sojae])

HSP 1 Score: 745.7 bits (1924), Expect = 1.000e-211
Identity = 356/525 (67.81%), Postives = 433/525 (82.48%), Query Frame = 0 
Query:   30 FSSKIKAVADRPSVVT---LKNAFRVRLEEERAKALQGGGEKRVAKQHAKGKLTARERLSLLLDEGSFRESDMLKTHRCTDFGMQDEMYPGDGVVTGWGTVNGRPVYVFSQDFTVFGGSLSETHAQKICKIMDKAVQSGVPVIGLNDSGGARIQEGVDSLGGYAEVFQRNVNASGVVPQISLVMGPCAGGAVYSPAMTDFIFMVRRTSYMFVTGPDVVRTVTQEEISQEELGGAETHTTMSGVAHCAFDNDIEALRATRLLLDFLPLNSREKPPAVHTEDSRHRQEPCLRYLCPDDPNHPYDMAEVVKKVVDEGNFFEIMPGFAKNIVTGFARLEGHPVAIVANNPAHLAGCLDINSSVKAGRFVRFADAFNIPIVTFVDVPGFLPGVDQEHNGIIRNGAKLLFAYAEATVPKVTVITRKAYGGAYDVMSSKHLRGDANFAWPGAEIAVMGAKGAVGIIFRGKDVEANTLKYTDRFANPMVAAQRGYIDEVIDPACTRQHLCKELEILRNKKVENPHRKHSNVPL 552
            ++S +   AD   ++T    K AF+  L++ R +AL+GGG +RVA+QH KGKLTARER+ LLLD GSFRE DMLK+HRC+DFGM+ + YPGDGVVTG G +NGR  +VFSQDFTVFGGSLSET+A+KI KIM KA++ G PVIGLNDSGGARIQEGV SL GYA++FQ NV ASGV+PQ++++MGPCAGGAVYSPAMTD+IFM R +SYMFVTGPDVV+TVT EE++QEELGGA THT  SGVAHCAFDND+EA+R  R   DFLPLN++EKPP   ++D R+R  P L  + P DPN PY+M +++ ++VD  +FFEIMP +AKNI+ GF R+EG  V IVAN P  LAGCLDINSSVK  RFVRF D+FNIPIVT VDVPGFLPG DQE+ GIIR+GAKLL+AYAEATVPK+T+ITRKAYGGAYDVMSSKHLRGD N+AWP AEIAVMGAKGAV IIFRG++VE NT  Y  +FANPMVAAQRG++D++I+P  TR+H+C++L++L  K V+NP +KH N+PL
Sbjct:   20 WASALADAADASPILTPAARKLAFKDELQQARQRALEGGGAQRVARQHEKGKLTARERIELLLDRGSFREFDMLKSHRCSDFGMETQQYPGDGVVTGRGLINGRLTFVFSQDFTVFGGSLSETYAEKIVKIMQKAMELGAPVIGLNDSGGARIQEGVASLAGYADIFQLNVLASGVIPQLTMIMGPCAGGAVYSPAMTDYIFMCRDSSYMFVTGPDVVKTVTNEEVTQEELGGAATHTKTSGVAHCAFDNDVEAIREMRRFFDFLPLNNKEKPPVRKSDDDRNRPVPTLESIVPPDPNVPYNMKDIINQIVDSFDFFEIMPDYAKNIIVGFGRMEGRVVGIVANQPMELAGCLDINSSVKGARFVRFCDSFNIPIVTLVDVPGFLPGTDQEYGGIIRHGAKLLYAYAEATVPKITIITRKAYGGAYDVMSSKHLRGDINYAWPSAEIAVMGAKGAVEIIFRGQNVEENTADYEKKFANPMVAAQRGFVDDIIEPVNTRRHICEDLDMLETKDVKNPWKKHGNIPL 544
[Close]
BLAST of NO28G00760 vs. NCBI_GenBank
Match: XP_008870869.1 (propionyl-CoA carboxylase beta chain, mitochondrial [Aphanomyces invadans] >ETW00734.1 propionyl-CoA carboxylase beta chain, mitochondrial [Aphanomyces invadans])

HSP 1 Score: 745.3 bits (1923), Expect = 1.300e-211
Identity = 359/505 (71.09%), Postives = 423/505 (83.76%), Query Frame = 0 
Query:   47 KNAFRVRLEEERAKALQGGGEKRVAKQHAKGKLTARERLSLLLDEGSFRESDMLKTHRCTDFGMQDEMYPGDGVVTGWGTVNGRPVYVFSQDFTVFGGSLSETHAQKICKIMDKAVQSGVPVIGLNDSGGARIQEGVDSLGGYAEVFQRNVNASGVVPQISLVMGPCAGGAVYSPAMTDFIFMVRRTSYMFVTGPDVVRTVTQEEISQEELGGAETHTTMSGVAHCAFDNDIEALRATRLLLDFLPLNSREKPPAVHTEDSRHRQEPCLRYLCPDDPNHPYDMAEVVKKVVDEGNFFEIMPGFAKNIVTGFARLEGHPVAIVANNPAHLAGCLDINSSVKAGRFVRFADAFNIPIVTFVDVPGFLPGVDQEHNGIIRNGAKLLFAYAEATVPKVTVITRKAYGGAYDVMSSKHLRGDANFAWPGAEIAVMGAKGAVGIIFRGKDVEANTLKYTDRFANPMVAAQRGYIDEVIDPACTRQHLCKELEILRNKKVENPHRKHSNVPL 552
            K AF+ +L+E RA+AL GGG KR   QH KGKL+ARERL LLLDEG+FRE DMLKTHRC DFGM+D+ YPGDGVVTG G +NGR  YVFSQDF+V GGSLSET+A+KI K+MDKA++ G PVIGLNDSGGARIQEGV SL GYA++FQ NV ASGVVPQ++++MGPCAGGAVYSPAMTDF+FM R TSYMFVTGPDVV+TVT EE++QE+LGGA THT  SGVAH AFDNDIEALR  R   DFLPLN++EKPP   T+D R R  P L  + P DPN PY+M +V+ ++VD+G+FFEIMP  AKNI+ G AR EG  V IVAN P  LAGCLDINSSVKA RFVRF D+FNIP+VT VDVPGFLPG DQE++GIIR+GAKLL+AYAEATVPK+TVITRKAYGGAYDVMSSKHLRGD N+AWP AEIAVMGAKGAV IIFRG++VEANT  Y ++FANPMVAAQRG++D++I+P  TR  +C++L+ L+ K ++NP +KH N+PL
Sbjct:   39 KLAFKKKLDETRAQALLGGGIKRQEAQHKKGKLSARERLELLLDEGTFREYDMLKTHRCKDFGMEDQQYPGDGVVTGHGLINGRLTYVFSQDFSVLGGSLSETYAEKIVKVMDKALKMGAPVIGLNDSGGARIQEGVASLAGYADIFQLNVMASGVVPQLTMIMGPCAGGAVYSPAMTDFVFMCRDTSYMFVTGPDVVKTVTNEEVTQEQLGGAVTHTKTSGVAHKAFDNDIEALRELRRFFDFLPLNNKEKPPIKETDDDRFRPVPTLESIVPPDPNVPYNMHDVIHQLVDDGDFFEIMPAHAKNILVGLARFEGRVVGIVANQPMELAGCLDINSSVKAARFVRFCDSFNIPLVTLVDVPGFLPGTDQEYHGIIRHGAKLLYAYAEATVPKITVITRKAYGGAYDVMSSKHLRGDVNYAWPSAEIAVMGAKGAVEIIFRGQNVEANTADYEEKFANPMVAAQRGFVDDIIEPTTTRLRICEDLDALQTKSLQNPWKKHGNIPL 543
[Close]
BLAST of NO28G00760 vs. NCBI_GenBank
Match: XP_009826225.1 (propionyl-CoA carboxylase beta chain, mitochondrial [Aphanomyces astaci] >ETV84533.1 propionyl-CoA carboxylase beta chain, mitochondrial [Aphanomyces astaci])

HSP 1 Score: 744.2 bits (1920), Expect = 2.900e-211
Identity = 359/505 (71.09%), Postives = 423/505 (83.76%), Query Frame = 0 
Query:   47 KNAFRVRLEEERAKALQGGGEKRVAKQHAKGKLTARERLSLLLDEGSFRESDMLKTHRCTDFGMQDEMYPGDGVVTGWGTVNGRPVYVFSQDFTVFGGSLSETHAQKICKIMDKAVQSGVPVIGLNDSGGARIQEGVDSLGGYAEVFQRNVNASGVVPQISLVMGPCAGGAVYSPAMTDFIFMVRRTSYMFVTGPDVVRTVTQEEISQEELGGAETHTTMSGVAHCAFDNDIEALRATRLLLDFLPLNSREKPPAVHTEDSRHRQEPCLRYLCPDDPNHPYDMAEVVKKVVDEGNFFEIMPGFAKNIVTGFARLEGHPVAIVANNPAHLAGCLDINSSVKAGRFVRFADAFNIPIVTFVDVPGFLPGVDQEHNGIIRNGAKLLFAYAEATVPKVTVITRKAYGGAYDVMSSKHLRGDANFAWPGAEIAVMGAKGAVGIIFRGKDVEANTLKYTDRFANPMVAAQRGYIDEVIDPACTRQHLCKELEILRNKKVENPHRKHSNVPL 552
            K AF+ +L+E RA+AL GGG KR   QH KGKL+ARERL LLLDEG+FRE DMLKTHRC DFGM+ + YPGDGVVTG G +NGR  YVFSQDFTV GGSLSET+A+KI K+MDKA++ G PVIGLNDSGGARIQEGV SL GYA++FQ NV ASGVVPQ++++MGPCAGGAVYSPAMTDF+FM R TSYMFVTGPDVV+TVT EE++QE+LGGA THT  SGVAH AFDNDIEALR  R   DFLPLN++EKPP   T+D+R R  P L  + P DPN PY+M +V+ ++VD+G+FFEIMP  AKNI+ G AR EG  V IVAN P  LAGCLDINSSVKA RFVRF DAFNIP+VT VDVPGFLPG DQE++GIIR+GAKLL+AYAEATVPK+TVITRKAYGGAYDVMSSKHLRGD N+AWP AEIAVMGAKGAV IIFRG++VEANT  Y ++FANP+VAAQRG++D++I+P  TR  +C++L+ L+ K ++NP +KH N+PL
Sbjct:   39 KLAFKKKLDETRAQALLGGGIKRQEAQHKKGKLSARERLELLLDEGTFREYDMLKTHRCKDFGMEAQQYPGDGVVTGHGLINGRLTYVFSQDFTVLGGSLSETYAEKIVKVMDKALKMGAPVIGLNDSGGARIQEGVASLAGYADIFQLNVLASGVVPQLTMIMGPCAGGAVYSPAMTDFVFMCRDTSYMFVTGPDVVKTVTNEEVTQEQLGGAVTHTKTSGVAHKAFDNDIEALRELRRFFDFLPLNNKEKPPVKDTDDTRFRAVPTLESIVPPDPNVPYNMHDVIHQLVDDGDFFEIMPAHAKNILVGLARFEGRVVGIVANQPTELAGCLDINSSVKAARFVRFCDAFNIPLVTLVDVPGFLPGTDQEYHGIIRHGAKLLYAYAEATVPKITVITRKAYGGAYDVMSSKHLRGDVNYAWPSAEIAVMGAKGAVEIIFRGQNVEANTADYEEKFANPLVAAQRGFVDDIIEPTTTRLRICEDLDALQTKSLQNPWKKHGNIPL 543
[Close]
BLAST of NO28G00760 vs. NCBI_GenBank
Match: OWZ21723.1 (Propionyl-CoA carboxylase beta chain, mitochondrial, partial [Phytophthora megakarya])

HSP 1 Score: 743.0 bits (1917), Expect = 6.500e-211
Identity = 354/505 (70.10%), Postives = 421/505 (83.37%), Query Frame = 0 
Query:   47 KNAFRVRLEEERAKALQGGGEKRVAKQHAKGKLTARERLSLLLDEGSFRESDMLKTHRCTDFGMQDEMYPGDGVVTGWGTVNGRPVYVFSQDFTVFGGSLSETHAQKICKIMDKAVQSGVPVIGLNDSGGARIQEGVDSLGGYAEVFQRNVNASGVVPQISLVMGPCAGGAVYSPAMTDFIFMVRRTSYMFVTGPDVVRTVTQEEISQEELGGAETHTTMSGVAHCAFDNDIEALRATRLLLDFLPLNSREKPPAVHTEDSRHRQEPCLRYLCPDDPNHPYDMAEVVKKVVDEGNFFEIMPGFAKNIVTGFARLEGHPVAIVANNPAHLAGCLDINSSVKAGRFVRFADAFNIPIVTFVDVPGFLPGVDQEHNGIIRNGAKLLFAYAEATVPKVTVITRKAYGGAYDVMSSKHLRGDANFAWPGAEIAVMGAKGAVGIIFRGKDVEANTLKYTDRFANPMVAAQRGYIDEVIDPACTRQHLCKELEILRNKKVENPHRKHSNVPL 552
            K AF+  LE  R +AL+GGG KRV  QHAKGKLTARER+ LLLD G+FRE DMLK+HRC+DFGM+ + YPGDGVVTG G +NGR  +VFSQDFTVFGGSLSET+A+KI KIM+KA++ G PVIGLNDSGGARIQEGV SL GYA++FQ NV ASGV+PQ+++VMGPCAGGAVYSPAMTD+IFM R +SYMFVTGPDVV+TVT EE++QEELGGA THT  SGVAHCAFDND+EA+R  R   DFLPLN++EKPP   ++D R+R  P L  + P D N PY+M +++ ++VD  +FFEIMP +AKNI+ GF R+EG  V I+AN P  LAGCLDINSSVK  RFVRF DAFNIPIVT VDVPGFLPG DQE+ GIIR+GAKLL+AYAEATVPK+T+ITRKAYGGAYDVMSSKHLRGD N+AWP AEIAVMGAKGAV IIFRGK+VE NT  Y  +FANPMVAAQRG++D++I+P  TR H+C++L++L  K V+NP +KH N+PL
Sbjct:   24 KLAFKEELENARKRALEGGGPKRVDNQHAKGKLTARERIELLLDNGTFREYDMLKSHRCSDFGMESQQYPGDGVVTGRGLINGRLTFVFSQDFTVFGGSLSETYAEKIVKIMNKAMELGAPVIGLNDSGGARIQEGVASLAGYADIFQLNVLASGVIPQLTMVMGPCAGGAVYSPAMTDYIFMCRDSSYMFVTGPDVVKTVTNEEVTQEELGGAATHTKTSGVAHCAFDNDVEAIREMRRFFDFLPLNNKEKPPVRTSDDDRNRPVPTLESIVPPDANVPYNMKDIIHQIVDSFDFFEIMPDYAKNIIVGFGRMEGRVVGILANQPMELAGCLDINSSVKGARFVRFCDAFNIPIVTLVDVPGFLPGTDQEYGGIIRHGAKLLYAYAEATVPKITIITRKAYGGAYDVMSSKHLRGDINYAWPSAEIAVMGAKGAVEIIFRGKNVEENTADYEKKFANPMVAAQRGFVDDIIEPVNTRLHICEDLDVLETKDVKNPWKKHGNIPL 528
[Close]
BLAST of NO28G00760 vs. NCBI_GenBank
Match: OQR91866.1 (propionyl-CoA carboxylase beta chain, mitochondrial precursor [Achlya hypogyna])

HSP 1 Score: 742.3 bits (1915), Expect = 1.100e-210
Identity = 354/505 (70.10%), Postives = 422/505 (83.56%), Query Frame = 0 
Query:   47 KNAFRVRLEEERAKALQGGGEKRVAKQHAKGKLTARERLSLLLDEGSFRESDMLKTHRCTDFGMQDEMYPGDGVVTGWGTVNGRPVYVFSQDFTVFGGSLSETHAQKICKIMDKAVQSGVPVIGLNDSGGARIQEGVDSLGGYAEVFQRNVNASGVVPQISLVMGPCAGGAVYSPAMTDFIFMVRRTSYMFVTGPDVVRTVTQEEISQEELGGAETHTTMSGVAHCAFDNDIEALRATRLLLDFLPLNSREKPPAVHTEDSRHRQEPCLRYLCPDDPNHPYDMAEVVKKVVDEGNFFEIMPGFAKNIVTGFARLEGHPVAIVANNPAHLAGCLDINSSVKAGRFVRFADAFNIPIVTFVDVPGFLPGVDQEHNGIIRNGAKLLFAYAEATVPKVTVITRKAYGGAYDVMSSKHLRGDANFAWPGAEIAVMGAKGAVGIIFRGKDVEANTLKYTDRFANPMVAAQRGYIDEVIDPACTRQHLCKELEILRNKKVENPHRKHSNVPL 552
            K AF+ +LEE RA+AL GGG KR   QH KGKLTARER+ LLLDEGSFRE DMLK+HRC DFGM+++ YPGDGV+TG G +NGR  +VFSQDFTV GGSLSET+A+KI K+MDKA++ G PVIGLNDSGGARIQEGV SL GYA++FQ+NV ASGVVPQ++++MGPCAGGAVYSPAMTDF+FM + TSYMFVTGPDVV+TVT EE++QE+LGGA THT  SGVAH AFDND+EALR  R   DFLPLN++E PP    +D RHR  P L  + P DPN PY+M +V++++VD G+F+EIM  +AKNI+ G AR EG  V IVAN P  LAGCLDINSS+KA RFVRF DAFNIP+VT VDVPGFLPG DQE+ GIIR+GAKLL+AYAEATVPK+TVITRKAYGGAYDVMSSKHLRGD N+AWP AEIAVMGAKGAV IIFRG++VE NT  Y ++FANPMVAAQRG++D++I+P  TR  +C++L++L NKK+ NP +KH N+PL
Sbjct:   39 KLAFKAKLEEARAQALLGGGAKRQEAQHKKGKLTARERIELLLDEGSFREYDMLKSHRCKDFGMENQHYPGDGVITGHGKINGRLTFVFSQDFTVLGGSLSETYAEKIIKVMDKAMKMGAPVIGLNDSGGARIQEGVASLAGYADIFQQNVLASGVVPQLTMIMGPCAGGAVYSPAMTDFVFMCKDTSYMFVTGPDVVKTVTNEEVTQEQLGGAVTHTKTSGVAHKAFDNDVEALREMRRFFDFLPLNNKESPPTRAKDDDRHRPVPTLESIVPPDPNMPYNMRDVIQQLVDNGDFYEIMNDYAKNILIGMARFEGRVVGIVANQPMELAGCLDINSSIKAARFVRFCDAFNIPLVTLVDVPGFLPGTDQEYAGIIRHGAKLLYAYAEATVPKITVITRKAYGGAYDVMSSKHLRGDVNYAWPSAEIAVMGAKGAVEIIFRGQNVEENTADYEEKFANPMVAAQRGFVDDIIEPTATRLRICEDLDVLHNKKLANPWKKHGNIPL 543
[Close]
BLAST of NO28G00760 vs. NCBI_GenBank
Match: XP_002907086.1 (propionyl-CoA carboxylase beta chain, mitochondrial precursor [Phytophthora infestans T30-4] >EEY63650.1 propionyl-CoA carboxylase beta chain, mitochondrial precursor [Phytophthora infestans T30-4])

HSP 1 Score: 739.2 bits (1907), Expect = 9.400e-210
Identity = 354/511 (69.28%), Postives = 423/511 (82.78%), Query Frame = 0 
Query:   47 KNAFRVRLEEERAKALQGGGEKRVAKQHAKGKLTARERLSLLLDEGSFRESDMLKTHRCTDFGMQDEMYPGDGVVTGWGTVNGRPVYVFSQDFTVFGGSLSETHAQKICKIMDKAVQSGVPVIGLNDSGGARIQEGVDSLGGYAEVFQRNVNASGVVPQISLVMGPCAGGAVYSPAMTDFIFMVRRTSYMFVTGPDVVRTVTQEEISQEELGGAETHTTMSGVAHCAFDNDIEALRATRLLLDFLPLNSREKPPAVHTEDSRHRQEPCLRYLCPDDPNHPYDMAEVVKKVVDEGNFFEIMPGFAKNIVTGFARLEGHPVAIVANNPAHLAGCLDINSSVKAGRFVRFADAFNIPIVTFVDVPGFLPGVDQEHNGIIRNGAKLLFAYAEATVPKVTVITRKAYGGAYDVMSSKHLRGDANFAWPGAEIAVMGAKGAVGIIFRGKDVEANTLKYTDRFANPM------VAAQRGYIDEVIDPACTRQHLCKELEILRNKKVENPHRKHSNVPL 552
            K AF   L++ R +AL+GGG +RVAKQH KGKLTARER+ LLLD G+FRE DMLK+HRC+DFGM+ + YPGDGVVTG G +NGR  +VFSQDFTVFGGSLSET+A+KI KIM KA+Q G PVIGLNDSGGARIQEGV SL GYA++FQ NV ASGV+PQ+++VMGPCAGGAVYSPAMTD+IFM R +SYMFVTGPDVV+TVT EE++QEELGGA THT  SGVAHCAFDND+EA+R  R   DFLPLN++EKPP   ++D R+R  P L  + P DPN PY+M +++ ++VD  +FFEIMP +AKNI+ GF R+EG  V I+AN P  LAGCLDINSSVK  RFVRF DAFNIPIVT VDVPGFLPG DQE+ GIIR+GAKLL+AYAEATVPK+T+ITRKAYGGAYDVMSSKHLRGD N+AWP AEIAVMGAKGAV IIFRG++VE NT  Y  +FANPM      VAAQRG++D++I+P  TR+H+C++L++L  K V+NP +KH N+PL
Sbjct:   19 KLAFTEELKQARKRALEGGGAERVAKQHEKGKLTARERIELLLDTGTFREYDMLKSHRCSDFGMEKQQYPGDGVVTGRGLINGRLTFVFSQDFTVFGGSLSETYAEKIVKIMQKAMQLGAPVIGLNDSGGARIQEGVASLAGYADIFQLNVLASGVIPQLTMVMGPCAGGAVYSPAMTDYIFMCRDSSYMFVTGPDVVKTVTNEEVTQEELGGAATHTKTSGVAHCAFDNDVEAIREMRRFFDFLPLNNKEKPPVRKSDDDRNRPVPTLESIVPPDPNVPYNMKDIIHQIVDSFDFFEIMPDYAKNIIVGFGRMEGRVVGILANQPMELAGCLDINSSVKGARFVRFCDAFNIPIVTLVDVPGFLPGTDQEYGGIIRHGAKLLYAYAEATVPKITIITRKAYGGAYDVMSSKHLRGDINYAWPSAEIAVMGAKGAVEIIFRGQNVEENTADYEKKFANPMVRLIMFVAAQRGFVDDIIEPVSTRRHICEDLDVLETKDVKNPWKKHGNIPL 529
[Close]
BLAST of NO28G00760 vs. NCBI_GenBank
Match: XP_012199465.1 (propionyl-CoA carboxylase subunit beta [Saprolegnia parasitica CBS 223.65] >KDO29870.1 propionyl-CoA carboxylase subunit beta [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 739.2 bits (1907), Expect = 9.400e-210
Identity = 359/538 (66.73%), Postives = 432/538 (80.30%), Query Frame = 0 
Query:   14 LLLRQSNSTLVRQQQSFSSKIKAVADRPSVVTLKNAFRVRLEEERAKALQGGGEKRVAKQHAKGKLTARERLSLLLDEGSFRESDMLKTHRCTDFGMQDEMYPGDGVVTGWGTVNGRPVYVFSQDFTVFGGSLSETHAQKICKIMDKAVQSGVPVIGLNDSGGARIQEGVDSLGGYAEVFQRNVNASGVVPQISLVMGPCAGGAVYSPAMTDFIFMVRRTSYMFVTGPDVVRTVTQEEISQEELGGAETHTTMSGVAHCAFDNDIEALRATRLLLDFLPLNSREKPPAVHTEDSRHRQEPCLRYLCPDDPNHPYDMAEVVKKVVDEGNFFEIMPGFAKNIVTGFARLEGHPVAIVANNPAHLAGCLDINSSVKAGRFVRFADAFNIPIVTFVDVPGFLPGVDQEHNGIIRNGAKLLFAYAEATVPKVTVITRKAYGGAYDVMSSKHLRGDANFAWPGAEIAVMGAKGAVGIIFRGKDVEANTLKYTDRFANPMVAAQRGYIDEVIDPACTRQHLCKELEILRNKKVENPHRKHSNVPL 552
            LL   +  + VR      +   + A   +    K AF+ +LEE RA+AL GGG  R   QH KGKLTARER+ LLLDEGSFRE DMLK+HRC DFGM+ + YPGDGV+TG G +NGR  +VFSQDFTV GGSLSET+A+KI K+MDKA++ G PVIGLNDSGGARIQEGV SL GYA++FQ+NV ASGVVPQ++++MGPCAGGAVYSPAMTDF+FM + TSYMFVTGPDVV+TVT EE++QE+LGGA THT  SGVAH AFDND+EALR  R   DFLPLN++E PP    +D RHR  P L  + P DPN PY+M +V+ ++VD G+F+EIM  +AKNI+ G AR EG  V IVAN P  LAGCLDINSS+KA RFVRF DAFNIP+VT VDVPGFLPG DQE+ GIIR+GAKLL+AYAEATVPK+TVITRKAYGGAYDVM+SKHLRGD N+AWP AEIAVMGAKGAV IIFRG++VEANT  Y ++FANPMVAAQRG++D++I+P  TR  +C++L++L+NKK+ENP +KH N+PL
Sbjct:    5 LLRAVTRPSFVRAPMPAFAAAFSTATEVTPAARKLAFKAKLEEARAQALLGGGAHRQDAQHKKGKLTARERIELLLDEGSFREYDMLKSHRCKDFGMETQHYPGDGVITGHGKINGRLTFVFSQDFTVLGGSLSETYAEKIIKVMDKAMKMGAPVIGLNDSGGARIQEGVASLAGYADIFQQNVLASGVVPQLTMIMGPCAGGAVYSPAMTDFVFMCKDTSYMFVTGPDVVKTVTNEEVTQEQLGGAVTHTKTSGVAHKAFDNDVEALREMRRFFDFLPLNNKESPPTRAKDDDRHRPVPTLESIVPPDPNVPYNMRDVIHQLVDNGDFYEIMNDYAKNILIGMARFEGRVVGIVANQPMELAGCLDINSSIKAARFVRFCDAFNIPLVTLVDVPGFLPGTDQEYAGIIRHGAKLLYAYAEATVPKITVITRKAYGGAYDVMASKHLRGDVNYAWPSAEIAVMGAKGAVEIIFRGQNVEANTADYEEKFANPMVAAQRGFVDDIIEPTATRLRICEDLDVLQNKKLENPWKKHGNIPL 542
The following BLAST results are available for this feature:
BLAST of NO28G00760 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM20922.14.900e-27586.03carboxyl transferase [Nannochloropsis gaditana][more]
XP_008909815.14.500e-21270.10propionyl-CoA carboxylase beta chain, mitochondria... [more]
KUF76905.14.500e-21270.10Propionyl-CoA carboxylase beta chain [Phytophthora... [more]
XP_009519986.11.000e-21167.81hypothetical protein PHYSODRAFT_353994 [Phytophtho... [more]
XP_008870869.11.300e-21171.09propionyl-CoA carboxylase beta chain, mitochondria... [more]
XP_009826225.12.900e-21171.09propionyl-CoA carboxylase beta chain, mitochondria... [more]
OWZ21723.16.500e-21170.10Propionyl-CoA carboxylase beta chain, mitochondria... [more]
OQR91866.11.100e-21070.10propionyl-CoA carboxylase beta chain, mitochondria... [more]
XP_002907086.19.400e-21069.28propionyl-CoA carboxylase beta chain, mitochondria... [more]
XP_012199465.19.400e-21066.73propionyl-CoA carboxylase subunit beta [Saprolegni... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL059nonsL059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR054ncniR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR094ngnoR094Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004873NSK004873Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO28G00760.1NO28G00760.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|606770gene_9179Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100061g16gene9494Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO28G00760.1NO28G00760.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO28G00760 ID=NO28G00760|Name=NO28G00760|organism=Nannochloropsis oceanica|type=gene|length=1656bp
ATGAACGCCATCTTGTCCCCTCGCTTGCGCCTGACCCAGCTGCTGCTGCG
CCAAAGCAACAGCACGCTGGTGCGGCAGCAGCAGTCGTTCTCATCCAAGA
TCAAGGCCGTGGCGGACCGGCCGAGCGTAGTGACACTCAAGAATGCCTTC
CGTGTGCGCCTGGAGGAGGAACGGGCCAAGGCCTTGCAAGGCGGGGGAGA
GAAACGTGTGGCCAAGCAGCATGCCAAGGGCAAGCTTACGGCACGGGAGC
GGCTATCATTGCTGCTGGATGAGGGCTCGTTTCGGGAGTCTGACATGCTC
AAGACGCATCGATGCACGGACTTTGGGATGCAAGACGAGATGTACCCGGG
GGATGGCGTGGTAACGGGCTGGGGAACCGTGAATGGGCGCCCTGTCTATG
TGTTTAGTCAGGATTTCACCGTATTTGGTGGATCATTGTCTGAAACGCAC
GCGCAGAAGATTTGCAAGATTATGGACAAGGCAGTGCAGTCGGGCGTGCC
TGTCATTGGGCTAAACGACTCGGGGGGTGCGCGCATCCAGGAAGGGGTCG
ATTCGCTGGGTGGGTACGCCGAGGTGTTTCAGCGCAATGTGAATGCGTCA
GGAGTAGTGCCTCAGATCAGCTTGGTCATGGGTCCATGTGCGGGGGGTGC
GGTGTACTCGCCGGCGATGACCGATTTTATTTTCATGGTGCGTCGGACTT
CGTACATGTTTGTGACAGGGCCGGATGTCGTCAGGACCGTGACACAGGAG
GAGATCTCGCAAGAGGAGCTGGGGGGCGCAGAGACACACACCACCATGTC
GGGCGTGGCCCACTGCGCATTTGACAATGACATTGAGGCTCTGCGGGCTA
CGAGGCTGTTGCTCGATTTCCTTCCGCTAAATTCACGCGAGAAGCCCCCA
GCCGTGCACACTGAAGACTCGCGCCATCGTCAAGAGCCCTGCCTGCGCTA
TTTGTGCCCAGATGACCCCAATCATCCGTATGATATGGCGGAAGTTGTAA
AGAAGGTGGTGGATGAAGGAAATTTTTTCGAGATTATGCCCGGTTTCGCC
AAGAACATTGTCACGGGTTTCGCACGCTTGGAGGGCCACCCGGTCGCCAT
CGTCGCAAACAACCCGGCGCATCTGGCTGGATGTTTGGACATAAATTCGT
CGGTGAAAGCGGGAAGGTTTGTGCGGTTCGCCGATGCGTTTAATATCCCG
ATCGTGACTTTCGTGGATGTCCCGGGGTTTTTGCCGGGGGTGGATCAGGA
GCACAACGGCATCATCCGAAACGGCGCGAAGCTGCTCTTTGCCTACGCTG
AAGCAACTGTGCCGAAGGTTACGGTGATCACGCGTAAGGCCTACGGGGGG
GCTTATGACGTCATGTCGAGTAAGCATCTGAGGGGCGACGCGAACTTTGC
ATGGCCGGGGGCCGAGATCGCTGTTATGGGCGCTAAGGGCGCCGTGGGCA
TAATCTTCAGGGGCAAGGATGTGGAGGCCAACACATTGAAGTACACAGAC
AGGTTTGCGAACCCGATGGTGGCGGCTCAGAGGGGATATATTGATGAGGT
GATTGACCCGGCCTGCACGAGGCAGCATCTCTGCAAGGAATTGGAAATCC
TGCGAAATAAGAAGGTGGAAAACCCGCACCGGAAGCACAGCAATGTGCCT
TTATAA
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protein sequence of NO28G00760.1

>NO28G00760.1-protein ID=NO28G00760.1-protein|Name=NO28G00760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=552bp
MNAILSPRLRLTQLLLRQSNSTLVRQQQSFSSKIKAVADRPSVVTLKNAF
RVRLEEERAKALQGGGEKRVAKQHAKGKLTARERLSLLLDEGSFRESDML
KTHRCTDFGMQDEMYPGDGVVTGWGTVNGRPVYVFSQDFTVFGGSLSETH
AQKICKIMDKAVQSGVPVIGLNDSGGARIQEGVDSLGGYAEVFQRNVNAS
GVVPQISLVMGPCAGGAVYSPAMTDFIFMVRRTSYMFVTGPDVVRTVTQE
EISQEELGGAETHTTMSGVAHCAFDNDIEALRATRLLLDFLPLNSREKPP
AVHTEDSRHRQEPCLRYLCPDDPNHPYDMAEVVKKVVDEGNFFEIMPGFA
KNIVTGFARLEGHPVAIVANNPAHLAGCLDINSSVKAGRFVRFADAFNIP
IVTFVDVPGFLPGVDQEHNGIIRNGAKLLFAYAEATVPKVTVITRKAYGG
AYDVMSSKHLRGDANFAWPGAEIAVMGAKGAVGIIFRGKDVEANTLKYTD
RFANPMVAAQRGYIDEVIDPACTRQHLCKELEILRNKKVENPHRKHSNVP
L*
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Synonyms
Publications