NO28G00650, NO28G00650 (gene) Nannochloropsis oceanica

Overview
NameNO28G00650
Unique NameNO28G00650
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2169
Alignment locationchr28:224797..226965 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr28genomechr28:224797..226965 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO28G00650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL059nonsL059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR054ncniR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR094ngnoR094Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO28G00650.1NO28G00650.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|674112gene_9167Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO28G00650.1NO28G00650.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO28G00650 ID=NO28G00650|Name=NO28G00650|organism=Nannochloropsis oceanica|type=gene|length=2169bp
ATGCTTTATGGGTGGATAGCACCTTACACGCATGCATGTTAACATGTTAA
CTTCACTCCTCAGACCATCAAGTTAGGTAGGTGCATCGGTGCCTTTCTCC
TAAACAGGTGTTAGTAAAAAAAAGGTAAATAACGGTAATTGTACCCCCCC
GCTTCCCCCCCCAAAAAAGGCCCATAACCCGGGAGGTAAGCTTAATCGTG
AGGAAGCTTCTACCCAGTCGTGTAATCAGAGTGCTGACATCGTTTCTCCC
CAAAATTTCGAGCTGATTCTCTTCGGTGTGCTTGTTATCCTGTTGGCAGA
GAAACAATGACTGCCAACGCCCTTCGATCATTGTACCAGAGGAGACAACT
GCTTTCCCTTTGTCCGCTTACAGTCATATTCGTAGCTGGCTTATGCTCTT
GGGAGCCCCCTCAAGCTCTCTCATCTCCACCATGCCTTACCACCGCATAA
GGGGCAATAGTTCGGGAGCACAGGCAGCATCCAGCATAGACAGCTGCCAG
CCAAGCTGCAGCAACACACACGGACAATACTCATGGTAAATGCACGGGAA
GGAAAGCGTGTGGCACAAGGCAAGGGCAAGAAGGGAGTCTAAAAGGCTGC
AACCATGAAGAAGACAGGGGTCGCTACCAAGCGCAAGGACCTGAAGCGTA
ATCGCACTCTTTCTGACGAGGCAGCCTATACCGAATCCGCCGCCAAGGTC
TCGGAATTGGTCACGCTGGCGCACAATTTTGCTTTCTTGAAGAGCGGCCG
AGCAGTTTACTGCGCAGTTCCTGAGATCAAGTGCCTCGTCACACTGGGAA
ACGAGATGGTGGATGCCGGGGTGATGACGGCGGGGCAATTCTATAAAACC
TGCGTGTCCTCGTCCTACTTTTCCCTCTACCGAAAGACAGATCGCTTTAC
TTATTTGCAGAGGCTCGCGGTACGAAAACAATTGAATAGCAAGTTTCTCG
ACGCGTGGAAGAGTGAGCAGCCCCTCAATAAAGCGGGAGAGGACTACGCC
CAAAAAGTGGGGCAAGAGGTGCGTGAGAAGGAAGATGAAGAGGAGGATGA
TATGTTTGAGAATTTAGCCGAGGCCACGGCTCGCGTTGCCTGGGGGAAGG
GGGCTTTGTTTAAGATGCTAAAGGGGTACGCTATTCATCGTGCGAGCAAC
AAGGGCTGCCCCTTTATCAAAGGTTGGATCAAGGCACAAGCCTCCATGGT
GGTCACCACCGTGTTGAAAGGTGAATTCAGCGCTGTAGACGTAAGGAGAT
GGGTGGCAAAGGCGAAGGGGAAGGACTCAAGCTTTTATTTTGTGTCTCAT
TTTGTGTCTTATGACGAGGAGATTGTGGGCTTTCTCTATCACGAGAAGGC
GGACTTCCAGGGCAAATATGACGTGGATCTGATCAGAGCGTATGGTGTTG
TCGAACGTCTGAAGAATAAGGGAGTCGGTCTGGCGTTAATTTATTCTTGC
TTCAGTGATCTACCCAGGTCCCCTTACATTTGTGCTGATATTGACAGTGC
ACACCTAGAGTCCCTTGCTTGTATCCGTCAGGCGGCACCGGTGTTTGGAC
GGAAGTTGTTGGCTCTAGGGCGGGTGGTGATGAGACCCAGTCAGGAATGC
ATCCTTGAGTGGAACCGGCACCCGCGGGCCGGGACTTTGGAAAGCAAGGA
GTGGTGCTGCATGCTCAAGGGTGTCCCTGACTTTGAAGAGCGCGAGAATG
AAGAACACTGGCCGGCCTTGGAGGAGGAGCATTTGCCTGCTACGGAAAGG
GATGACAAGCAAGGAGGAGGGAAGCCATAAGAGAAGAATATGGTGGTAAA
GCAGAAGATCAAAAATGTGAGGATAATGAAGGCGAAAGAGAAAAATATGG
CGATAAAGCAGAAGAAAGTTTCGAGGAATCTCCGTGGGCGTCCACACAAG
AGCACTACATTCCTCACGAGGAGCACCCCAAAAAAGAAGAAAGAGGATTA
ACTAAAGAGATTATAAATAAATGGAAGACAAGGAAAAGCGAGACAAAGAA
CAGCGTGGGCAAGGAGAAGGAGAGCTAGAGCGAGGTCACGGGTGCCAAGA
AAATTAAGGTTGGAAAGTGAGATTTGTCCGTGGGAAAAAGGACAGGTGAC
AAATATCACTCGTGTCCTGTCTTACATGTGCTGTGTGTTGAGAGAAGAAA
AGGTGCGCCAAAGAGCAAA
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protein sequence of NO28G00650.1

>NO28G00650.1-protein ID=NO28G00650.1-protein|Name=NO28G00650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=392bp
MKKTGVATKRKDLKRNRTLSDEAAYTESAAKVSELVTLAHNFAFLKSGRA
VYCAVPEIKCLVTLGNEMVDAGVMTAGQFYKTCVSSSYFSLYRKTDRFTY
LQRLAVRKQLNSKFLDAWKSEQPLNKAGEDYAQKVGQEVREKEDEEEDDM
FENLAEATARVAWGKGALFKMLKGYAIHRASNKGCPFIKGWIKAQASMVV
TTVLKGEFSAVDVRRWVAKAKGKDSSFYFVSHFVSYDEEIVGFLYHEKAD
FQGKYDVDLIRAYGVVERLKNKGVGLALIYSCFSDLPRSPYICADIDSAH
LESLACIRQAAPVFGRKLLALGRVVMRPSQECILEWNRHPRAGTLESKEW
CCMLKGVPDFEERENEEHWPALEEEHLPATERDDKQGGGKP*
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Synonyms
Publications