NO28G00570, NO28G00570 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G00570 vs. NCBI_GenBank
Match: EWM20912.1 (plant like protein [Nannochloropsis gaditana]) HSP 1 Score: 283.9 bits (725), Expect = 4.600e-73 Identity = 161/238 (67.65%), Postives = 177/238 (74.37%), Query Frame = 0 Query: 1 MRKLYLVVLSSLAAMSCVAATASLPATLVTTRRPSSPSCCFLRPSLPSASS------XXXXXXXXXXXXXXXXXXXXXXXXESPSLFERAFSAMPYMLPVLDSVNYSKFLAFYAPQFFNPVYAALDPLLAVYKSSPFINLAIYLLIVWVGRQPALSRFVRFNFQQAIILDIALVIPSILTSILREQAAPVWVQEPVANTLFFILSASLLYVSAKLALGEKPNEIPLVSEAAELTSGPF 233 MR YL+ LSSL A + VA S P+T S CF+ SLP A S ESPSLFERAFSA PY+LPVLDS+NYS+FLAFYAP FNP+YAALDPLLAVYK+SPFINLAIYLLIVWVGRQPALSR+VRFNFQQAIILD+ALVIPSILTSILREQAAPVWVQEPVANTLFFILSASL YV+ KL LG+KPNEIPL+SEAAE+T+GPF Sbjct: 66 MRAFYLLALSSLLAAN-VAMAVSRPST-------DMSSSCFVPTSLPRAMSSLQRRRPYTPSPATSSRSSCCMRLNANQSPESPSLFERAFSATPYLLPVLDSINYSRFLAFYAPDLFNPIYAALDPLLAVYKASPFINLAIYLLIVWVGRQPALSRYVRFNFQQAIILDVALVIPSILTSILREQAAPVWVQEPVANTLFFILSASLAYVAVKLTLGQKPNEIPLISEAAEMTAGPF 295
BLAST of NO28G00570 vs. NCBI_GenBank
Match: XP_005854917.1 (hypothetical protein NGA_0603620 [Nannochloropsis gaditana CCMP526] >EKU21446.1 hypothetical protein NGA_0603620 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 280.4 bits (716), Expect = 5.000e-72 Identity = 138/157 (87.90%), Postives = 151/157 (96.18%), Query Frame = 0 Query: 76 ESPSLFERAFSAMPYMLPVLDSVNYSKFLAFYAPQFFNPVYAALDPLLAVYKSSPFINLAIYLLIVWVGRQPALSRFVRFNFQQAIILDIALVIPSILTSILREQAAPVWVQEPVANTLFFILSASLLYVSAKLALGEKPNEIPLVSEAAELTSGPF 233 ESPSLFERAFSA PY+LPVLDS+NYS+FLAFYAP FNP+YAALDPLLAVYK+SPF+NLAIYLLIVWVGRQPALSR+VRFNFQQAIILD+ALVIPSILTSILREQAAPVWVQEPVANTLFFILSASL YV+ KL LG+KPNEIPL+SEAAE+T+GPF Sbjct: 56 ESPSLFERAFSATPYLLPVLDSINYSRFLAFYAPDLFNPIYAALDPLLAVYKASPFVNLAIYLLIVWVGRQPALSRYVRFNFQQAIILDVALVIPSILTSILREQAAPVWVQEPVANTLFFILSASLAYVAVKLTLGQKPNEIPLISEAAEMTAGPF 212
BLAST of NO28G00570 vs. NCBI_GenBank
Match: OSX68593.1 (hypothetical protein BU14_2526s0001, partial [Porphyra umbilicalis]) HSP 1 Score: 104.8 bits (260), Expect = 3.800e-19 Identity = 54/148 (36.49%), Postives = 87/148 (58.78%), Query Frame = 0 Query: 86 SAMPYMLPVLDSVNYSKFLAFYAPQFFNPVYAALDPLLAVYKSSPFINLAIYL-LIVWVGRQPALSRFVRFNFQQAIILDIALVIPSILTSILREQAAPVWVQEPVANTLFFILSASLLYVSAKLALGEKPNEIPLVSEAAELTSGPF 233 ++ PY+LP+LD + + +F+ AP V A+ PL +Y+ +PF I+ L V + R SRFVRFN QQA+++D+ L++P +L + P W+ E ++T+F+ + AS++Y GE P++IP VSEA E GP+ Sbjct: 2 ASAPYLLPLLDGLVFGRFVFERAPALAALVVPAVAPLFRLYRGTPFFAFGIFFALYVLIVRNTGFSRFVRFNTQQALLIDVVLILPQLLGGAVAAAGVPGWILEAGSSTIFYAVVASVVYAVVSNLRGETPDQIPGVSEAVEAQIGPY 149
BLAST of NO28G00570 vs. NCBI_GenBank
Match: XP_005538732.1 (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >BAM82696.1 hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 95.5 bits (236), Expect = 2.300e-16 Identity = 57/153 (37.25%), Postives = 88/153 (57.52%), Query Frame = 0 Query: 82 ERAFSAMPYMLPVLDSVNYSKFLAFYAPQFFNPVYAALDPLLAVYKSSPFINLAIY-LLIVWVGRQPALSRFVRFNFQQAIILDIALVIPSILTSILREQAAPVWVQEPVANTLFFILSASLLYVSAKLALGEKPNEIPLVSEAA--ELTSGP 232 ER +PY++P+LDS+ Y K++ P F V L PLL++Y+ PF+ L I+ L++V V R P +S FVRFN QA+ LDIAL++P + + + + ++F+ + +LYV G+ P+ IPL+SEAA + SGP Sbjct: 181 ERLLGILPYLVPLLDSLVYGKYVFERFPIFSMFVLQPLWPLLSIYRGIPFLPLIIFVLMLVLVVRNPRVSYFVRFNTMQALTLDIALILPQLFQGLSNALPVSAVAIQVLQASVFYGMLGCILYVIQSCGRGQVPDRIPLISEAAHTQTMSGP 333
BLAST of NO28G00570 vs. NCBI_GenBank
Match: PRW39238.1 (TIC 20- chloroplastic [Chlorella sorokiniana]) HSP 1 Score: 90.1 bits (222), Expect = 9.700e-15 Identity = 52/153 (33.99%), Postives = 89/153 (58.17%), Query Frame = 0 Query: 77 SPSLFERAFSAMPYMLPVLDSVNYSKFLAFYAPQFFNPVYAALDPLLAVYKSSPFINLAIYLLI-VWVGRQPALSRFVRFNFQQAIILDIALVIPSILTSILREQAAPVWVQEPVA--NTLFFILSASLLYVSAKLALGEKPNEIPLVSEAAE 227 SP + +R +A+PY++P+LD + Y KF PQ F+ + L+PL+ +Y S PF L ++ + + + P +R+VR+N QAI+LDI L++P ++ SI+R +Q + NT+F L A + Y A G+ +P+V++AA+ Sbjct: 102 SPEIPDRVVAAIPYLIPLLDGLRYGKFFLVQFPQ-FSTLLLPLEPLIRLYFSVPFAGLVVFFAVYLGIINNPNFTRYVRYNAMQAILLDIILILPGLIESIVRPPMGGPGLQIYITLYNTIFLFLFACVAYGMGSCATGQTA-RLPIVADAAD 252
BLAST of NO28G00570 vs. NCBI_GenBank
Match: XP_005765199.1 (hypothetical protein EMIHUDRAFT_257034 [Emiliania huxleyi CCMP1516] >EOD12770.1 hypothetical protein EMIHUDRAFT_257034 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 89.7 bits (221), Expect = 1.300e-14 Identity = 56/156 (35.90%), Postives = 85/156 (54.49%), Query Frame = 0 Query: 78 PSLFERAFSAMPYMLPVLDSVNYSKFLAFYAPQFFNPVYAALDPLLAVYKSSPFINLAIYLLIVWVGR-QPALSRFVRFNFQQAIILDIALVIPSILTSILREQAAPVWVQEPVANTLFFILSASLLYVSAKLALGEKPNEIPLVSEAAELTSGPF 233 P ER F+ +PY+LP LD Y ++ P + A L PL+ + S PF + ++ + + R LSRFVRFN QQA++LDI L+IPS+ + P V +N +F+ ++ + Y A GE P+++P++SEAA L GPF Sbjct: 67 PPAVERVFATLPYVLPFLDGFQYGLYVFNNVPGGVSFAEAVL-PLVVAFNSLPFSGIIFFIGLSFFTRPDSGLSRFVRFNIQQALVLDILLIIPSLFSG--AAGMVPSSVAILGSNFVFYTMALVVTYALYSNARGELPDQVPVISEAAGLQIGPF 219
BLAST of NO28G00570 vs. NCBI_GenBank
Match: XP_005768057.1 (hypothetical protein EMIHUDRAFT_103158 [Emiliania huxleyi CCMP1516] >XP_005789471.1 hypothetical protein EMIHUDRAFT_110050 [Emiliania huxleyi CCMP1516] >EOD15628.1 hypothetical protein EMIHUDRAFT_103158 [Emiliania huxleyi CCMP1516] >EOD37042.1 hypothetical protein EMIHUDRAFT_110050 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 89.4 bits (220), Expect = 1.600e-14 Identity = 56/156 (35.90%), Postives = 84/156 (53.85%), Query Frame = 0 Query: 78 PSLFERAFSAMPYMLPVLDSVNYSKFLAFYAPQFFNPVYAALDPLLAVYKSSPFINLAIYLLIVWVGR-QPALSRFVRFNFQQAIILDIALVIPSILTSILREQAAPVWVQEPVANTLFFILSASLLYVSAKLALGEKPNEIPLVSEAAELTSGPF 233 P ER F+ +PY+LP LD Y ++ P A L PL+ + S PF + ++ + + R LSRFVRFN QQA++LDI L+IPS+ + P V +N +F+ ++ + Y A GE P+++P++SEAA L GPF Sbjct: 5 PPAVERVFATLPYVLPFLDGFQYGLYVFNNVPGGVGFAEAVL-PLVVAFNSLPFSGIIFFIGLSFFTRPDSGLSRFVRFNIQQALVLDILLIIPSLFSG--AAGMVPSSVAILGSNFVFYTMALVVTYALYSNARGELPDQVPVISEAAGLQIGPF 157
BLAST of NO28G00570 vs. NCBI_GenBank
Match: XP_005706234.1 (hypothetical protein Gasu_29350 [Galdieria sulphuraria] >EME29714.1 hypothetical protein Gasu_29350 [Galdieria sulphuraria]) HSP 1 Score: 89.0 bits (219), Expect = 2.200e-14 Identity = 50/150 (33.33%), Postives = 85/150 (56.67%), Query Frame = 0 Query: 78 PSLFERAFSAMPYMLPVLDSVNYSKFLAFYAPQFFNPVYAALDPLLAVYKSSPFINLAIY-LLIVWVGRQPALSRFVRFNFQQAIILDIALVIPSI-LTSILREQAAPVWVQEPVANTLFFILSASLLYVSAKLALGEKPNEIPLVSEAA 226 PS R + +PY++P+LD V Y +F+ P ++ L PLL VY+ PF+ ++ +L ++ R + F+RFN QAI++D+ L+IP + L + A P V E + + +F + +YV +A G KP+++PL+SEA+ Sbjct: 78 PSPKNRLLAFLPYLMPLLDGVVYGRFVFAKYPVISAFIFYPLQPLLIVYRGIPFLAFVLFAMLFYFIVRNETVDNFIRFNTMQAILIDLVLIIPQMFLHATSASGAIPPGVVESLCSLVFCAIVVITMYVIICVARGNKPDQVPLISEAS 227
BLAST of NO28G00570 vs. NCBI_GenBank
Match: XP_002179527.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49350.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 86.7 bits (213), Expect = 1.100e-13 Identity = 47/152 (30.92%), Postives = 84/152 (55.26%), Query Frame = 0 Query: 77 SPSLFERAFSAMPYMLPVLDSVNYSKFLAFYAPQFFNPVYAALDPLLAVYKSSPFINLAIYLLIVWVGRQPALSRFVRFNFQQAIILDIALVIPSILTSILR----EQAAPVWVQEPVANTLFFILSASLLYVSAKLALGEKPNEIPLVSEA 225 +P+ ++ S +PY+ P+LD + +++FL P NP+ + A+Y+S PF + + ++ P ++R +R+N QQAI LDIAL P ++ ++ + P V E ++ +F L A+L Y + LG P++IP++SEA Sbjct: 200 APTTQDKLISVLPYLFPLLDGLQFARFLVLENPD--NPISGIIALSYALYRSIPFGGFIAFFALSFLSGNPTINRLIRYNMQQAIFLDIALFFPGLIAAVFSLVGGGKFLPQGVTEIGSDVMFVTLLATLGYCTVSSLLGGTPDKIPIISEA 349
BLAST of NO28G00570 vs. NCBI_GenBank
Match: OEU10973.1 (hypothetical protein FRACYDRAFT_246074 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 86.7 bits (213), Expect = 1.100e-13 Identity = 52/157 (33.12%), Postives = 83/157 (52.87%), Query Frame = 0 Query: 76 ESPSLFERAFSAMPYMLPVLDSVNYSKFLAFYAPQFFNPVYAALDPLLAVYKSSPFINLAIYLLIVWVGRQPALSRFVRFNFQQAIILDIALVIPSILTSILREQAAPVWVQEP-----VANTLFF-ILSASLLYVSAKLALGEKPNEIPLVSEAAE 227 + P+ ++ S +PY+ P+LDS+ + +FL NP+ L L Y+S PF +L + + P L++ VRFN QQAI LDIAL P ++ +++ + P ANT+ F +L ++LY S LG P+ IP++S+A E Sbjct: 148 KDPTTKDKIISVIPYLFPLLDSLQFGRFLIMENAD--NPLVGLLGLLFTAYRSIPFSGFIAFLALNTLSSNPGLNKLVRFNMQQAIFLDIALFFPGLVIALIGGLGSVAGFTIPDAGNQAANTVIFGVLLLTVLYTSISSLLGITPDAIPIISKAVE 302 The following BLAST results are available for this feature:
BLAST of NO28G00570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00570 ID=NO28G00570|Name=NO28G00570|organism=Nannochloropsis oceanica|type=gene|length=1672bpback to top protein sequence of NO28G00570.1 >NO28G00570.1-protein ID=NO28G00570.1-protein|Name=NO28G00570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=233bpback to top Synonyms
Publications
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