NO28G00560, NO28G00560 (gene) Nannochloropsis oceanica

BLAST of NO28G00560 vs. NCBI_GenBank
Match: XP_005854915.1 (type ii alternative rna polymerase sigma sigma-70 family protein [Nannochloropsis gaditana CCMP526] >EKU21444.1 type ii alternative rna polymerase sigma sigma-70 family protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 381.3 bits (978), Expect = 3.900e-102
Identity = 201/258 (77.91%), Postives = 219/258 (84.88%), Query Frame = 0

Query:  140 NPPGADGTVRTSTSIHLPAEQQLELARCVKSWVACKETKKEREEMIGRPLSFEEWAVAVGMEEKTLRRQIEDGKAARELLIKTNINLIKSMAVRLYARQEKNENRLSVDDLVLEGTQGILKAAAKFDPTRNIRFTTYAVWWIRQAISLAIQTHSNTVRLPVLLQARIKKIKEARLRLYLLLEREPTHEEVGKEIGLPAGKVESIRRKGGRGRLVGAEEEWVVVGMAMGNGMDGEEGREEGVQQQAGEGGWGWSKGERG 398
            NPPGADG+V+TSTSIHLPAEQQLELARCVKSW+ CK  K E E  +GRP++F EWA A+G+EE  LRRQI DGKAARELL+KTNINL+KSMAVRL+  QEKNENRLSVDDL+LEGTQGILKAAAKFDPTRN+RF+TYAVWWIRQAISLAIQTHSNTVRLPVLLQ RIKKIK ARLRLYL LEREPTHEEVG+E+GLPAGKVE IRRK  RGRLVG EEEWVV GM +     G EG EE  QQQ G GG    +GE G
Sbjct:   15 NPPGADGSVKTSTSIHLPAEQQLELARCVKSWLTCKAVKAEEESTLGRPIAFSEWARALGVEESALRRQIADGKAARELLVKTNINLVKSMAVRLHQSQEKNENRLSVDDLILEGTQGILKAAAKFDPTRNVRFSTYAVWWIRQAISLAIQTHSNTVRLPVLLQTRIKKIKAARLRLYLQLEREPTHEEVGREVGLPAGKVERIRRKTARGRLVGEEEEWVVAGMTVA----GTEGPEE-EQQQRGTGGIEGREGEAG 267          

BLAST of NO28G00560 vs. NCBI_GenBank
Match: EWM20947.1 (rna sigma 70 subfamily [Nannochloropsis gaditana])

HSP 1 Score: 338.6 bits (867), Expect = 2.900e-89
Identity = 175/234 (74.79%), Postives = 195/234 (83.33%), Query Frame = 0

Query:  123 RTPSNTLNSNLKAFPSENPPGADGTVRTSTSIHLPAEQQLELARCVKSWVACKETKKEREEMIGRPLSFEEWAVAVGMEEKTLRRQIEDGKAARELLIKTNINLIKSMAVRLYARQEKNENRLSVDDLVLEGTQGILKAAAKFDPTRNIRFTTYAVWWIRQAISLAIQTHSNTVRLPVLLQARIKKIKEARLRLYLLLEREPTHEEVGK-EIGLPAGKVESIRRKGGRGRLVGA 356
            RTP NTL S+LK   + NPPGADG+V+TSTSIHLPAEQQLELARCVKSW+ CK  K E E  +GRP++F EWA A+G+EE  LRRQI DGKAARELL+KTNINL+KSMAVRL+  QEKNENRLSVDDL+LEGTQGILKAAAKFDPTRN+RF+TYAVWWIRQAISLAIQTHSNTVRLPVLLQ RIKKIK ARLRLYL LEREPTHEEVG+ E+G        + R  G   + GA
Sbjct:  120 RTPLNTLTSSLKGPLTPNPPGADGSVKTSTSIHLPAEQQLELARCVKSWLTCKAVKAEEESTLGRPIAFSEWARALGVEESALRRQIADGKAARELLVKTNINLVKSMAVRLHQSQEKNENRLSVDDLILEGTQGILKAAAKFDPTRNVRFSTYAVWWIRQAISLAIQTHSNTVRLPVLLQTRIKKIKAARLRLYLQLEREPTHEEVGREELGFALSPFSRVERGKGAESVWGA 353          

BLAST of NO28G00560 vs. NCBI_GenBank
Match: XP_022719930.1 (RNA polymerase sigma factor sigB-like [Durio zibethinus])

HSP 1 Score: 131.0 bits (328), Expect = 9.100e-27
Identity = 71/194 (36.60%), Postives = 117/194 (60.31%), Query Frame = 0

Query:  150 TSTSIHLPAEQQLELARCVKSWVACKETKKEREEMIGRPLSFEEWAVAVGMEEKTLRRQIEDGKAARELLIKTNINLIKSMAVRLYARQEKNENRLSVDDLVLEGTQGILKAAAKFDPTRNIRFTTYAVWWIRQAISLAIQTHSNTVRLPVLLQARIKKIKEARLRLYLLLEREPTHEEVGKEIGLPAGKVESI 344
            TSTS  L A ++LEL+  ++  +  +  ++E  E  G   +F +WA A G++ +TLRR+I  G   ++ +IK+NI L+ S+A      +      +++ DLV EG +G+++ A KFD ++  RF+TYA WWI+QA+  ++  HS T+RLP  +     ++KEAR RLY    R+P +EEV +  GL   K+ ++
Sbjct:  273 TSTSRLLTANEELELSEGIQDLLKLERLQEELAERCGGQPTFAQWAAAAGVDPQTLRRRINYGVLCKDKMIKSNIRLVISIA------KNYRGAGMNIQDLVQEGCRGLVRGAEKFDASKGFRFSTYAYWWIKQAVRKSLSDHSRTIRLPFHMVEATYRVKEARKRLYSENGRQPDNEEVAEATGLSMKKLTAV 460          

BLAST of NO28G00560 vs. NCBI_GenBank
Match: WP_016823463.1 (RNA polymerase sigma factor [Streptomyces viridosporus])

HSP 1 Score: 126.3 bits (316), Expect = 2.200e-25
Identity = 76/192 (39.58%), Postives = 115/192 (59.90%), Query Frame = 0

Query:  156 LPAEQQLELARCVKSWVACKETKKEREEMIGRPLSFEEWAVAVGMEEKTLRRQIEDGKAARELLIKTNINLIKSMAVRLYARQEKNENRLSVDDLVLEGTQGILKAAAKFDPTRNIRFTTYAVWWIRQAISLAIQTHSNTVRLPVLLQARIKKIKEARLRLYLLLEREPTHEEVGKEIGLPAGKVESIRRKG 348
            L AE ++ LA+ +++ +  KE + ER E  G  L+ E W        + L   + DG+AA++ +I+ N+ L+ SMA R   R       L + D++ EG  G+++A  KFD T+  +F+TYA WWIRQAI   + TH+ TVRLPV +  +++K+ +   RL+L L+REPT EEV +E GL   KV  +RR G
Sbjct:   52 LDAEDEVRLAQRIEAGLRAKE-ECERAESGGHHLTRERW--------RELEAAVHDGQAAKDRMIRANLRLVVSMAKRHAHR------GLPLLDVIQEGNLGLIRAVEKFDHTKGFKFSTYATWWIRQAIERGVATHARTVRLPVHVVEQLQKLGKVERRLHLSLDREPTVEEVARESGLAEEKVVWLRRVG 228          

BLAST of NO28G00560 vs. NCBI_GenBank
Match: XP_010097670.1 (RNA polymerase sigma factor sigB [Morus notabilis] >EXB70625.1 RNA polymerase sigma factor rpoD [Morus notabilis])

HSP 1 Score: 126.3 bits (316), Expect = 2.200e-25
Identity = 67/194 (34.54%), Postives = 118/194 (60.82%), Query Frame = 0

Query:  150 TSTSIHLPAEQQLELARCVKSWVACKETKKEREEMIGRPLSFEEWAVAVGMEEKTLRRQIEDGKAARELLIKTNINLIKSMAVRLYARQEKNENRLSVDDLVLEGTQGILKAAAKFDPTRNIRFTTYAVWWIRQAISLAIQTHSNTVRLPVLLQARIKKIKEARLRLYLLLEREPTHEEVGKEIGLPAGKVESI 344
            TSTS  L A +++EL+  ++  +  ++ ++E  E  G P +F +WA A G+++KTLRR+I  G   ++ +IK+N+ L+ S+A      +      +++ DLV EG +G+++ A KFD ++  +F+TYA WWI+QA+  ++   S T+RLP  +     ++KEAR +LY    R+P  EEV +  GL   ++ ++
Sbjct:  270 TSTSRLLTATEEIELSEGIQDLLKLEKLQEELAERCGGPPTFAQWAAAAGVDQKTLRRRINYGILCKDKMIKSNVRLVISIA------KNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPNDEEVAEATGLSMKRLAAV 457          

BLAST of NO28G00560 vs. NCBI_GenBank
Match: WP_004979632.1 (RNA polymerase sigma factor [Streptomyces viridosporus] >EFE65388.1 RNA polymerase principal sigma factor HrdC [Streptomyces viridosporus ATCC 14672])

HSP 1 Score: 125.9 bits (315), Expect = 2.900e-25
Identity = 76/192 (39.58%), Postives = 114/192 (59.38%), Query Frame = 0

Query:  156 LPAEQQLELARCVKSWVACKETKKEREEMIGRPLSFEEWAVAVGMEEKTLRRQIEDGKAARELLIKTNINLIKSMAVRLYARQEKNENRLSVDDLVLEGTQGILKAAAKFDPTRNIRFTTYAVWWIRQAISLAIQTHSNTVRLPVLLQARIKKIKEARLRLYLLLEREPTHEEVGKEIGLPAGKVESIRRKG 348
            L AE ++ LA+ + + +  KE + ER E  G  L+ E W        + L   + DG+AA++ +I+ N+ L+ SMA R   R       L + D++ EG  G+++A  KFD T+  +F+TYA WWIRQAI   + TH+ TVRLPV +  +++K+ +   RL+L L+REPT EEV +E GL   KV  +RR G
Sbjct:   52 LDAEDEVRLAQRIAAGLRAKE-EYERAESGGHHLTRERW--------RELEAAVHDGQAAKDRMIRANLRLVVSMAKRHAHR------GLPLLDVIQEGNLGLIRAVEKFDHTKGFKFSTYATWWIRQAIERGVATHARTVRLPVHVVEQLQKLGKVERRLHLSLDREPTVEEVARESGLAEKKVVWLRRVG 228          

BLAST of NO28G00560 vs. NCBI_GenBank
Match: WP_018398551.1 (RNA polymerase sigma factor, RpoD/SigA family [filamentous cyanobacterium ESFC-1])

HSP 1 Score: 125.9 bits (315), Expect = 2.900e-25
Identity = 70/191 (36.65%), Postives = 112/191 (58.64%), Query Frame = 0

Query:  156 LPAEQQLELARCVKSWVACKETKKEREEMIGRPLSFEEWAVAVGMEEKTLRRQIEDGKAARELLIKTNINLIKSMAVRLYARQEKNENRLSVDDLVLEGTQGILKAAAKFDPTRNIRFTTYAVWWIRQAISLAIQTHSNTVRLPVLLQARIKKIKEARLRLYLLLEREPTHEEVGKEIGLPAGKVESIRRK 347
            L  E+++  A+ V+ W+  +++K+E  E +G   SF +WA AV + E  L++ I  G+ A+  +++ N+ L+ S+A +   R       L + DL+ EGT G+ +   KFDPT+  RF+TYA WWIRQAI+ AI   S T+RLP+ +  ++ KIK+A+ +L   L R  T  E+G E+ L   +V     K
Sbjct:   23 LTHEEEILYAKSVQQWLGLQKSKEELAEKLGTEPSFSQWAEAVNLSEAELQKIIITGERAKRKMVEANLRLVVSVAKKYIKR------NLDLLDLIQEGTIGMQRGVEKFDPTKGYRFSTYAYWWIRQAITRAIAEKSRTIRLPIHITEKLNKIKKAQRQLSQSLGRAATVAELGAELDLTPKQVRDYLEK 207          

BLAST of NO28G00560 vs. NCBI_GenBank
Match: XP_009409922.1 (PREDICTED: RNA polymerase sigma factor sigB-like [Musa acuminata subsp. malaccensis])

HSP 1 Score: 125.2 bits (313), Expect = 5.000e-25
Identity = 71/197 (36.04%), Postives = 121/197 (61.42%), Query Frame = 0

Query:  150 TSTSIHLPAEQQLELARCVKSWVACKETKKEREEMIGR---PLSFEEWAVAVGMEEKTLRRQIEDGKAARELLIKTNINLIKSMAVRLYARQEKNENRLSVDDLVLEGTQGILKAAAKFDPTRNIRFTTYAVWWIRQAISLAIQTHSNTVRLPVLLQARIKKIKEARLRLYLLLEREPTHEEVGKEIGLPAGKVESI 344
            TSTS  L A ++LEL++ ++  +   + ++ REE++GR     +F +WA A G+++KTLR+++ DG   ++ +IK+NI L+ S+A      +      LS+ DLV EG +G++K A KFD ++  +F+TYA WWI+QA+  ++   S T+RLP  +     +++EA+ +LY    R P + EV    GL   +VE++
Sbjct:  257 TSTSKLLSAVEELELSKGIQDLL---KLERLREELVGRNGGQPTFAQWATAAGIDQKTLRKRLNDGTFCKDKMIKSNIRLVISIA------KNYQNAGLSLQDLVQEGYRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRRSLSEQSRTIRLPFHMVEATYRVREAKKQLYSENGRHPDYVEVAVATGLSMKRVETV 444          

BLAST of NO28G00560 vs. NCBI_GenBank
Match: XP_022744699.1 (RNA polymerase sigma factor sigB-like [Durio zibethinus])

HSP 1 Score: 125.2 bits (313), Expect = 5.000e-25
Identity = 67/194 (34.54%), Postives = 117/194 (60.31%), Query Frame = 0

Query:  150 TSTSIHLPAEQQLELARCVKSWVACKETKKEREEMIGRPLSFEEWAVAVGMEEKTLRRQIEDGKAARELLIKTNINLIKSMAVRLYARQEKNENRLSVDDLVLEGTQGILKAAAKFDPTRNIRFTTYAVWWIRQAISLAIQTHSNTVRLPVLLQARIKKIKEARLRLYLLLEREPTHEEVGKEIGLPAGKVESI 344
            TST   L A ++LEL+  ++  +  ++ ++E  E  G   +F +WA A G+++KTLRR++  G   ++ +IK+NI L+ S+A      +      +++ DLV EG +G+++ A KFD ++  +F+TYA WWI+QA+  ++   S T+RLP+ +     ++KEAR +LY    R+P +EEV +  GL   K+  +
Sbjct:  270 TSTFRLLTANEELELSEGIQDLLKLEKLQEELAERCGGQPTFAQWAAAAGVDQKTLRRRLNYGVLCKDKMIKSNIRLVISIA------KNYRGVGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSNKSRTIRLPIHMVEATYRVKEARKQLYSENGRQPDNEEVAEATGLSMKKLADV 457          

BLAST of NO28G00560 vs. NCBI_GenBank
Match: XP_010661180.1 (PREDICTED: RNA polymerase sigma factor sigB [Vitis vinifera] >CBI40014.3 unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 124.8 bits (312), Expect = 6.500e-25
Identity = 67/194 (34.54%), Postives = 117/194 (60.31%), Query Frame = 0

Query:  150 TSTSIHLPAEQQLELARCVKSWVACKETKKEREEMIGRPLSFEEWAVAVGMEEKTLRRQIEDGKAARELLIKTNINLIKSMAVRLYARQEKNENRLSVDDLVLEGTQGILKAAAKFDPTRNIRFTTYAVWWIRQAISLAIQTHSNTVRLPVLLQARIKKIKEARLRLYLLLEREPTHEEVGKEIGLPAGKVESI 344
            TSTS  L A ++LEL+  ++  +  ++ +++ EE  G   +F +WA A G+++KTLRR+   G   ++ +IK+NI L+ S+A      +      +++ DLV EG +G+++ A KFD ++  +F+TYA WWI+QA+  ++   S T+RLP  +     ++KEAR +LY    R P +EEV +  GL   ++ ++
Sbjct:  272 TSTSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIA------KNYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAV 459