Naga_100547g3, gene9478 (gene) Nannochloropsis gaditana

Overview
NameNaga_100547g3
Unique Namegene9478
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037256.1:41418..43744 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100547g3
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:41418..43744 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700DNA-binding transcription factor activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL094ngnoL094Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO28G00560NO28G00560Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna9758rna9758-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna9758rna9758Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna9758

>rna9758-protein ID=rna9758-protein|Name=rna9758|organism=Nannochloropsis gaditana|type=polypeptide|length=410bp
MKRPSQFGHRTVAVPLSLSLLVFYFSNPGAKSFVIPSTPVISDFANSCRR
VLSPAYPFFDVHDSLPSIFCGRIPSTEARCRQAPREVNPHRLFMSAASLT
TRSNSGSFPERGGTGGSRRRTPLNTLTSSLKGPLTPNPPGADGSVKTSTS
IHLPAEQQLELARCVKSWLTCKAVKAEEESTLGRPIAFSEWARALGVEES
ALRRQIADGKAARELLVKTNINLVKSMAVRLHQSQEKNENRLSVDDLILE
GTQGILKAAAKFDPTRNVRFSTYAVWWIRQAISLAIQTHSNTVRLPVLLQ
TRIKKIKAARLRLYLQLEREPTHEEVGREELGFALSPFSRVERGKGAESV
WGARGGSPQAVEGIDLSGACNALKCSGGWIEKITLKQSILQFTLKQERVF
EASNKKGNKV
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Synonyms
Publications