NO28G00310, NO28G00310 (gene) Nannochloropsis oceanica

Overview
NameNO28G00310
Unique NameNO28G00310
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3162
Alignment locationchr28:116427..119588 +

Link to JBrowse

Properties
Property NameValue
DescriptionOrnithine cyclodeaminase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr28genomechr28:116427..119588 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR003462ODC_Mu_crystall
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
BLAST of NO28G00310 vs. NCBI_GenBank
Match: CBN75077.1 (Ornithine cyclodeaminase [Ectocarpus siliculosus])

HSP 1 Score: 410.2 bits (1053), Expect = 6.500e-111
Identity = 209/332 (62.95%), Postives = 245/332 (73.80%), Query Frame = 0
Query:   27 TAVRAMATMPTPKFFDYATVKKTLNVGQAFKAVEEAFAMLADGKVDVPQPMHIGIHETPTAGPGDCHIKGGYIEGKTTFTVKLATVSFYKNMAKGLPPGAGIFVVCDATNGAPVGVFQENRFMTDLRTGAAGGIAVKYFGSSPKHTSVGFVGTGAIAKVMAQGAAVAHKFKQGYAYGLDPAMSASFAKEIEAELGYPVKVCATAEEAVRASDVLFTQTPGSKPVLELSWLKPHATIIASGSDQPTKNEIPPEVQAKSKFICDLVRQCSRLGELRTGIASGLVKESDVHAEIGEVVSGKKKGREGDELILVDLTGTGAQDAAIGQVAWDILSK 359
            TA RA AT+P P+ FDY TV   L    A +AVE AF MLA GKVDVP PMHIGI E+  AGPGDCHIKGGYI G +T+TVKLA VSFYKN+ KGLP G+GIFVVCDATNGAP+ +FQENRF+TDLRTGAAG ++VK+F ++  H  VGFVG G IA  MA+G+   H+F +G+AYGLD   +  +A EIEAELGY                           V+EL WL+PHATIIASGSDQPTKNEIP EVQ  SK +CDLVRQC ++GELR+ I +G++   DV+AEIG+VV+G K GR G+ELILVDLTGTGAQDAAIGQVAWDILSK
Sbjct:   43 TACRAFATVPGPRLFDYDTVTSVLKQSDAVEAVEAAFGMLAKGKVDVPIPMHIGIDESEKAGPGDCHIKGGYISGTSTWTVKLANVSFYKNVEKGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHF-AARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDVVKTKEWADEIEAELGY--------------------------KVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGVMTRDDVYAEIGDVVNGDKPGRTGEELILVDLTGTGAQDAAIGQVAWDILSK 347          
BLAST of NO28G00310 vs. NCBI_GenBank
Match: XP_002286230.1 (ornithine cyclodeaminase [Thalassiosira pseudonana CCMP1335] >EED95871.1 ornithine cyclodeaminase, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 407.9 bits (1047), Expect = 3.200e-110
Identity = 218/358 (60.89%), Postives = 265/358 (74.02%), Query Frame = 0
Query:    4 AVRRLALLQPRTRLSPLAATTSSTAVRAMAT--MPTPKFFDYATVKKTLNVGQAFKAVEEAFAMLADGKVDVPQPMHIGIHETPTAGPGDCHIKGGYIEGKTTFTVKLATVSFYKNMAKGLPPGAGIFVVCDATNGAPVGVFQENRFMTDLRTGAAGGIAVKYFGSSPKHTSVGFVGTGAIAKVMAQGAAVAHKFKQGYAYGLDPAMSASFAKEIEAELGYPVKVCATAEEAVRASDVLFTQTPGSKPVLELSWLKPH-ATIIASGSDQPTKNEIPPEVQAKSKFICDLVRQCSRLGELRTGIASGLVKESDVHAEIGEVVSGKKKGREGDELILVDLTGTGAQDAAIGQVAWDILSK 359
            A+RR  + Q      PL A+  STAVR+ A+   P P+ FDY TV   L V  A ++VEEAF  LA GKVDVP PMHIGI E+  AGPGDCHIKGGY+    TFTVKLA VSFYKN+ K LPPG+GIF+V +A  GAP+GVFQENRFMTDLRTGAAG +A+KY  ++P+   VGF+G GAIAK MA+ AA    +K G AY  + A    FAK++ AELG P +V ++AEE    SDV++TQTPG   VLE  WL P   TIIASGSDQPTK EIPP+V A SK+I DL +Q S++GELR+ +A+G++ E+DVHAE+GEVV+G K GREG+E+I+VDLTGTGAQDAAIGQVAWD LSK
Sbjct:    9 AIRRALVTQ------PLVASAKSTAVRSFASSGFPPPRLFDYETVTSNLTVADAIESVEEAFKALAKGKVDVPMPMHIGIDESSVAGPGDCHIKGGYVSATPTFTVKLACVSFYKNVEKNLPPGSGIFIVVNAVTGAPLGVFQENRFMTDLRTGAAGAVAMKYC-TTPEQDVVGFIGCGAIAKNMARAAAAVRPYK-GVAYAHEGA--DEFAKQMSAELGVPFEVVSSAEELCGKSDVIYTQTPGGSTVLEKDWLNPKGVTIIASGSDQPTKCEIPPDVLAASKYISDLTKQTSKVGELRSALAAGVMTEADVHAELGEVVNGDKSGREGNEIIVVDLTGTGAQDAAIGQVAWDKLSK 356          
BLAST of NO28G00310 vs. NCBI_GenBank
Match: XP_002502166.1 (predicted protein [Micromonas commoda] >ACO63424.1 predicted protein [Micromonas commoda])

HSP 1 Score: 400.2 bits (1027), Expect = 6.700e-108
Identity = 192/323 (59.44%), Postives = 246/323 (76.16%), Query Frame = 0
Query:   35 MPTPKFFDYATVKKTLNVGQAF-KAVEEAFAMLADGKVDVPQPMHIGIHETPTAGPGDCHIKGGYIEGKTTFTVKLATVSFYKNMAKGLPPGAGIFVVCDATNGAPVGVFQENRFMTDLRTGAAGGIAVKYFGSSPKHTSVGFVGTGAIAKVMAQGAAVAHKFKQGYAYGLDPAMSASFAKEIEAELGYPVKVCATAEEAVRASDVLFTQTPGSKPVLELSWLKPHATIIASGSDQPTKNEIPPEVQAKSKFICDLVRQCSRLGELRTGIASGLVKESDVHAEIGEVVSGKKKGREGDELILVDLTGTGAQDAAIGQVAWDIL 357
            +P PK +DY T+K ++   +   ++VE+AF+ LA+G+VDVP PMHIGI ETP AGPGDCHIKGGYIEG  T+TVKLA VSFY N+ KGLP G+G+FVVCDATNG P  V  ENR++TDLRTGAAG +AVK+        SV F+GTG IA+ MA+ +A  H F+QGY Y  D   +++F  ++ AELGY    C++AEEAVR +DV+FTQTPG + VL+L WLKPHA I+ASGSDQPTKNEIPP V  K++ + D+  QC R+GELR+ +A+G++KE+DVHA++GEV++G KKGR G ELI+ DLTGTGAQDAAIG     +L
Sbjct:  190 LPAPKLYDYDTIKSSVAPSRELTESVEDAFSQLANGRVDVPLPMHIGIAETPEAGPGDCHIKGGYIEGAPTWTVKLANVSFYNNVKKGLPAGSGVFVVCDATNGGPKAVLHENRYLTDLRTGAAGAVAVKHLAIKDA-KSVAFIGTGVIAEAMARSSATVHGFEQGYGYSRDMTKNSAFCDKMSAELGYAFTPCSSAEEAVRNADVVFTQTPGGEWVLDLKWLKPHALIVASGSDQPTKNEIPPAVMKKARVVTDITAQCLRVGELRSAVAAGVMKETDVHAQLGEVINGTKKGRTGKELIVCDLTGTGAQDAAIGSYVMKVL 511          
BLAST of NO28G00310 vs. NCBI_GenBank
Match: XP_005758584.1 (ornithine cyclodeaminase [Emiliania huxleyi CCMP1516] >EOD06155.1 ornithine cyclodeaminase [Emiliania huxleyi CCMP1516])

HSP 1 Score: 397.5 bits (1020), Expect = 4.400e-107
Identity = 203/341 (59.53%), Postives = 252/341 (73.90%), Query Frame = 0
Query:   18 SPLAATTSSTAVRAMATMPTPKFFDYATVKKTLNVGQAFKAVEEAFAMLADGKVDVPQPMHIGIHETPTAGPGDCHIKGGYIEGKTTFTVKLATVSFYKNMAKGLPPGAGIFVVCDATNGAPVGVFQENRFMTDLRTGAAGGIAVKYFGSSPKHTSVGFVGTGAIAKVMAQGAAVAHKFKQGYAYGLDPAMSASFAKEIEAELGYPVKVCATAEEAVRASDVLFTQTPGSKPVLELSWLKPHATIIASGSDQPTKNEIPPEVQAKSKFICDLVRQCSRLGELRTGIASGLVKESDVHAEIGEVVSGKKKGREGDELILVDLTGTGAQDAAIGQVAWDILSK 359
            S L A      + +   +P PK FDYATV   ++V  A  AVE AF  LA GKVDVP PMHIGI ET +AGPGDCHIKGGY+ G++T+TVKLA VSFYKN+A GLPPG GIFVV +A NGAP+ V QENRF+TD+RTGAAGGI+VKY  + P   +VGF+GTGAIAK MA+  A       G+AYG D  M+ SF  E+ AELG       +AEE   ++ V+FTQTPGS  VLE S L+P +T+IASGSDQPTK E+P ++ A  K++CDLV Q S++GELR+ +A+G + E+DV+AE+G+VV+G K GREGDE+I+ DLTGTGAQDAAIGQVAW+ LSK
Sbjct:    5 SRLPAALPLRRLLSTKAIPPPKLFDYATVTSHIHVSDAISAVEAAFGALARGKVDVPFPMHIGIDETASAGPGDCHIKGGYVSGESTWTVKLACVSFYKNVADGLPPGGGIFVVMNAKNGAPLAVIQENRFLTDVRTGAAGGISVKYL-TKPTDKTVGFIGTGAIAKSMARATAAVRPGFTGFAYGADAEMAQSFCDEMRAELGCEFTAVGSAEELCASAKVVFTQTPGSATVLERSMLQPGSTVIASGSDQPTKQELPVDLLANCKYVCDLVGQVSKVGELRSALAAGAMTEADVYAELGQVVNGDKPGREGDEIIVCDLTGTGAQDAAIGQVAWEKLSK 344          
BLAST of NO28G00310 vs. NCBI_GenBank
Match: XP_003057364.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH59009.1 predicted protein [Micromonas pusilla CCMP1545])

HSP 1 Score: 397.1 bits (1019), Expect = 5.700e-107
Identity = 196/323 (60.68%), Postives = 244/323 (75.54%), Query Frame = 0
Query:   35 MPTPKFFDYAT-VKKTLNVGQAFKAVEEAFAMLADGKVDVPQPMHIGIHETPTAGPGDCHIKGGYIEGKTTFTVKLATVSFYKNMAKGLPPGAGIFVVCDATNGAPVGVFQENRFMTDLRTGAAGGIAVKYFGSSPKHTSVGFVGTGAIAKVMAQGAAVAHKFKQGYAYGLDPAMSASFAKEIEAELGYPVKVCATAEEAVRASDVLFTQTPGSKPVLELSWLKPHATIIASGSDQPTKNEIPPEVQAKSKFICDLVRQCSRLGELRTGIASGLVKESDVHAEIGEVVSGKKKGREGDELILVDLTGTGAQDAAIGQVAWDIL 357
            +P PK +DY T V K     +  ++VE AFA LA GKVDVP PMHIGI ET  AGPGDCHIKGGYIEG  T+TVKLA VSFYKN+ KGLP G+G+FVVCDATNG P  V  ENR++TD+RTGAAG + VK+        SV F+GTG IA+ MA+  A  + F+QGY Y  +   + +F  +++ ELGY  K C +AEEAVR +DV+FTQTPG + VL+L+WLKPHATIIASGSDQPTKNEIPPEV  K+K I D+  QC R+GE+R+ +A+G++KESDVHAE+GE+++G KKGR+G ELI+ DLTGTGAQDAAIG    ++L
Sbjct:   22 LPAPKLYDYDTIVSKVKPNKELTESVEAAFAELAKGKVDVPLPMHIGIAETAAAGPGDCHIKGGYIEGAPTWTVKLACVSFYKNVEKGLPAGSGVFVVCDATNGGPKAVLHENRYLTDMRTGAAGAVCVKHLAVKGA-KSVAFIGTGVIAESMARSTATVYGFEQGYGYSRNIDKATAFCDKMQKELGYDFKACDSAEEAVRNADVVFTQTPGGEWVLDLAWLKPHATIIASGSDQPTKNEIPPEVMKKAKVITDITAQCVRVGEVRSAVAAGVMKESDVHAELGEIINGSKKGRQGKELIVCDLTGTGAQDAAIGSYVMNVL 343          
BLAST of NO28G00310 vs. NCBI_GenBank
Match: XP_003057365.1 (predicted protein, partial [Micromonas pusilla CCMP1545] >EEH59010.1 predicted protein, partial [Micromonas pusilla CCMP1545])

HSP 1 Score: 394.0 bits (1011), Expect = 4.800e-106
Identity = 198/339 (58.41%), Postives = 249/339 (73.45%), Query Frame = 0
Query:   18 SPLAATTSSTAV------RAMATMPTPKFFDYATVKKTLNVGQAF-KAVEEAFAMLADGKVDVPQPMHIGIHETPTAGPGDCHIKGGYIEGKTTFTVKLATVSFYKNMAKGLPPGAGIFVVCDATNGAPVGVFQENRFMTDLRTGAAGGIAVKYFGSSPKHTSVGFVGTGAIAKVMAQGAAVAHKFKQGYAYGLDPAMSASFAKEIEAELGYPVKVCATAEEAVRASDVLFTQTPGSKPVLELSWLKPHATIIASGSDQPTKNEIPPEVQAKSKFICDLVRQCSRLGELRTGIASGLVKESDVHAEIGEVVSGKKKGREGDELILVDLTGTGAQDAAIG 350
            SP++  TS+ A            +P P  +DY T+   +   +A  +AVE AFA LA GKVDVP PMHIGI ET  AGPGDCHIKGGYIEG  T+TVKLA VSFYKN+ KGLP G+G+FVVCDATNG P  V  ENR++TD+RTGAAG + VK+   +P   SV F+GTG IA+ MA+  A  H F++ +AY   P  S+SF K++  ELGYP   CATAE+AVR +DV+FTQTPG + VLE  WL+PHATIIASGSDQPTKNEIPPE+   +K + D+  QCSR+GELR+ I +GL+ E++VHAEIG+++SG+++GR G+E I+ DLTGTGAQDAAIG
Sbjct:    3 SPISFPTSANAADVAKPSSGPQRLPAPVLYDYDTIVNNVKPARALVEAVEAAFAELAKGKVDVPLPMHIGIAETAAAGPGDCHIKGGYIEGAPTWTVKLACVSFYKNVEKGLPAGSGVFVVCDATNGGPKAVLHENRYLTDMRTGAAGAVCVKHL--APDAKSVAFIGTGVIAEAMAKATATVHGFEEAFAYARSPQKSSSFCKKMTKELGYPFYACATAEDAVRNADVVFTQTPGGEWVLEEQWLRPHATIIASGSDQPTKNEIPPEILMNAKVVTDITAQCSRVGELRSAIEAGLMTEANVHAEIGQIISGEREGRVGNERIVCDLTGTGAQDAAIG 339          
BLAST of NO28G00310 vs. NCBI_GenBank
Match: XP_002178185.1 (ornithine cyclodeaminase [Phaeodactylum tricornutum CCAP 1055/1] >EEC49850.1 ornithine cyclodeaminase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 383.3 bits (983), Expect = 8.500e-103
Identity = 194/334 (58.08%), Postives = 239/334 (71.56%), Query Frame = 0
Query:   23 TTSSTAVRAMATMPTPKFFDYATVKKTLNVGQAFKAVEEAFAMLADGKVDVPQPMHIGIHETPTAGPGDCHIKGGYIEGKTTFTVKLATVSFYKNMAKGLPPGAGIFVVCDATNGAPVGVFQENRFMTDLRTGAAGGIAVKYFGSSPKHTSVGFVGTGAIAKVMAQGAAVAHKFKQGYAYGLDPAMSASFAKEIEAELGYPVKVCATAEEAVRASDVLFTQTPGSKPVLELSWLKPHATIIASGSDQPTKNEIPPEVQAKSKFICDLVRQCSRLGELRTGIASGLVKESDVHAEIGEVVSGKKKGREGDELILVDLTGTGAQDAAIGQVAWDIL 357
            T+    VR  A  P P+ FDY TV   L+V  A  AVE AF  LA G+VDVP PMHIG+ ETPTAGPGDCHIKGGY+ G  TFTVKLA VSFYKN+ +GLP G+G+F V DA  GAP+ V QENR+MTDLRTGAAG +A+K+     +   +GF+G GAIA+ MA+ +        G  YGL  A +  FA ++  ELG    V A+A E   + +V++TQTPGS  VLEL WL+P  TIIASGSDQPTK EIP +V   SK+I DL++Q S++GELR  + +G++ E+DVHAE+G+VV+G K GREGDELI+VDLTGTGAQDAAIGQVAWD L
Sbjct:   12 TSFPLRVRTFAAFPAPRLFDYDTVTSHLSVADAIDAVESAFGALAKGQVDVPMPMHIGVAETPTAGPGDCHIKGGYVLGAPTFTVKLACVSFYKNLEQGLPAGSGLFCVVDAVTGAPLAVLQENRYMTDLRTGAAGAVALKHTTLPGQELRIGFIGAGAIARTMARASKAVRPHFTGMVYGL--AGADDFANDMHDELGLDFTVAASARELCESCNVIYTQTPGSDTVLELDWLQPGTTIIASGSDQPTKQEIPNDVLKASKYIADLIKQTSKVGELRGALQAGVMTEADVHAELGQVVNGDKSGREGDELIVVDLTGTGAQDAAIGQVAWDKL 343          
BLAST of NO28G00310 vs. NCBI_GenBank
Match: GAX21031.1 (hypothetical protein FisN_1Lh297 [Fistulifera solaris])

HSP 1 Score: 376.7 bits (966), Expect = 8.000e-101
Identity = 195/336 (58.04%), Postives = 246/336 (73.21%), Query Frame = 0
Query:   24 TSSTAVRAMAT--MPTPKFFDYATVKKTLNVGQAFKAVEEAFAMLADGKVDVPQPMHIGIHETPTAGPGDCHIKGGYIEGKTTFTVKLATVSFYKNMAKGLPPGAGIFVVCDATNGAPVGVFQENRFMTDLRTGAAGGIAVKYFGSSPKHTSVGFVGTGAIAKVMAQGAAVAHKFKQGYAYGLDPAMSASFAKEIEAELGYPVKVCATAEEAVRASDVLFTQTPGSKPVLELSWLKPHATIIASGSDQPTKNEIPPEVQAKSKFICDLVRQCSRLGELRTGIASGLVKESDVHAEIGEVVSGKKKGREGDELILVDLTGTGAQDAAIGQVAWDILS 358
            +++ + RA+AT   P P+ FDY TV   L+V  A ++VE AF  LA G+VDVP PMHIGIHET +AGPGDCHIKGGY+ G  TFTVKLA VSFYKN+ K LP G+G+F+V DA  GAP+ VFQENRFMTDLRTGAAG +++KY      + ++GF+G GAIA+ MA+ A       +G AYGL  A +  FA ++  ELG   +V   + E    S+V+FTQTPG   VLEL+ L+P  TIIASGSDQPTK EIP +V   SK+I DL +Q S++GELR+ +  G++ ESDV+AE+GE+V+G K GR+GDELI+VDLTGTGAQDAAIGQVAWD LS
Sbjct:   22 SAAASRRALATSAFPAPRLFDYETVTSNLSVADAIESVEAAFGALAKGEVDVPMPMHIGIHETASAGPGDCHIKGGYVSGTKTFTVKLACVSFYKNLEKNLPAGSGVFIVVDAVTGAPLAVFQENRFMTDLRTGAAGAVSLKYTTRPDDYLTIGFIGCGAIARNMARAAKAVRPNFRGVAYGL--AGADEFAADMSGELGLDFQVARCSAELCGMSNVIFTQTPGGNTVLELNDLRPGTTIIASGSDQPTKQEIPVDVLKASKYISDLTKQTSKVGELRSALKEGVMTESDVYAELGELVNG-KPGRQGDELIVVDLTGTGAQDAAIGQVAWDKLS 354          
BLAST of NO28G00310 vs. NCBI_GenBank
Match: GAX12364.1 (hypothetical protein FisN_1Hh297 [Fistulifera solaris])

HSP 1 Score: 376.7 bits (966), Expect = 8.000e-101
Identity = 194/336 (57.74%), Postives = 241/336 (71.73%), Query Frame = 0
Query:   22 ATTSSTAVRAMATMPTPKFFDYATVKKTLNVGQAFKAVEEAFAMLADGKVDVPQPMHIGIHETPTAGPGDCHIKGGYIEGKTTFTVKLATVSFYKNMAKGLPPGAGIFVVCDATNGAPVGVFQENRFMTDLRTGAAGGIAVKYFGSSPKHTSVGFVGTGAIAKVMAQGAAVAHKFKQGYAYGLDPAMSASFAKEIEAELGYPVKVCATAEEAVRASDVLFTQTPGSKPVLELSWLKPHATIIASGSDQPTKNEIPPEVQAKSKFICDLVRQCSRLGELRTGIASGLVKESDVHAEIGEVVSGKKKGREGDELILVDLTGTGAQDAAIGQVAWDILS 358
            +  +S    A +  P P+ FDY TV   L+V  A ++VE AF  LA G+VDVP PMHIGIHET  AGPGDCHIKGGY+ G  TFTVKLA VSFYKN+ K LP G+G+F+V DA  GAP+ VFQENRFMTDLRTGAAG +++KY        ++GF+G GAIA+ MA+ A       +G AYGL  A +  FA ++ AELG   +V  ++ E    S+V+FTQTPG   VLEL+ L+P  TIIASGSDQPTK EIP +V   SK+I DL +Q S++GELR+ +  G + E+DV+AE+GE+V+G K GREGDELI+VDLTGTGAQDAAIGQVAWD LS
Sbjct:   22 SVAASRRTLATSAFPAPRLFDYETVTSNLSVADAIESVESAFGALAKGEVDVPMPMHIGIHETAAAGPGDCHIKGGYVSGTKTFTVKLACVSFYKNLEKNLPAGSGVFIVVDAVTGAPLAVFQENRFMTDLRTGAAGAVSLKYTTGPEDDLTIGFIGCGAIARNMARAAKAVRPNFKGVAYGL--AGAEEFAADMSAELGLDFQVAKSSAELCGMSNVIFTQTPGGNTVLELNDLRPGTTIIASGSDQPTKQEIPVDVLKASKYISDLTKQTSKVGELRSALKEGAMTEADVYAELGELVNG-KPGREGDELIVVDLTGTGAQDAAIGQVAWDKLS 354          
BLAST of NO28G00310 vs. NCBI_GenBank
Match: OEU15061.1 (NAD(P)-binding protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 357.8 bits (917), Expect = 3.800e-95
Identity = 192/337 (56.97%), Postives = 236/337 (70.03%), Query Frame = 0
Query:   21 AATTSSTAVRAMATMPTPKFFDYATVKKTLNVGQAFKAVEEAFAMLADGKVDVPQPMHIGIHETPTAGPGDCHIKGGYIEGKTTFTVKLATVSFYKNMA-KGLPPGAGIFVVCDATNGAPVGVFQENRFMTDLRTGAAGGIAVKYFGSSPKHTSV-GFVGTGAIAKVMAQGAAVAHKFKQGYAYGLDPAMSASFAKEIEAELGYPVKVCATAEEAVRASDVLFTQTPGSKPVLELSWLKPHATIIASGSDQPTKNEIPPEVQAKS-KFICDLVRQCSRLGELRTGIASGLVKESDVHAEIGEVVSGKKKGREGD-ELILVDLTGTGAQDAAIGQVAW 354
            A   S+T      T P P+ F Y  +K  L V  A  +VEEAF  LA GKVDVP PMHIGI E+  AGPGDCHIKGGY+ G  TFTVKLA VSFYKN+  +GLP G+G+FVV DA  G P+G+FQENRFMTDLRTGAAG +A+KY  ++P+  +V GF+GTGAIA+ M + AA   K   G AYGLD   +  FA E+ AELG P  V +++E+    S+V+FTQT GS  VL L+ LK   TIIASG+DQPTK E+P +V A + K+I DL +Q SR+GELR  I +  +   DV+ E+GE+V+G K GRE D ELI+VDLTGTGAQDAAIGQV W
Sbjct:   25 ALAASTTTTNETPTFPAPRLFSYEQIKSNLTVNDAIPSVEEAFGALAKGKVDVPMPMHIGIEESENAGPGDCHIKGGYVFGAKTFTVKLACVSFYKNVTERGLPAGSGVFVVVDAVRGCPLGIFQENRFMTDLRTGAAGAVALKY--TTPEDNNVIGFIGTGAIARNMCRAAAAVRKNFTGIAYGLDVEGAKIFADEMSAELGIPFSVASSSEDLCGQSNVIFTQTTGSDFVLNLNHLKKGTTIIASGTDQPTKQELPNDVLASADKYISDLTKQTSRVGELRGAIEANAMTTDDVYCELGELVNGTKAGRENDHELIVVDLTGTGAQDAAIGQVRW 359          
The following BLAST results are available for this feature:
BLAST of NO28G00310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBN75077.16.500e-11162.95Ornithine cyclodeaminase [Ectocarpus siliculosus][more]
XP_002286230.13.200e-11060.89ornithine cyclodeaminase [Thalassiosira pseudonana... [more]
XP_002502166.16.700e-10859.44predicted protein [Micromonas commoda] >ACO63424.1... [more]
XP_005758584.14.400e-10759.53ornithine cyclodeaminase [Emiliania huxleyi CCMP15... [more]
XP_003057364.15.700e-10760.68predicted protein [Micromonas pusilla CCMP1545] >E... [more]
XP_003057365.14.800e-10658.41predicted protein, partial [Micromonas pusilla CCM... [more]
XP_002178185.18.500e-10358.08ornithine cyclodeaminase [Phaeodactylum tricornutu... [more]
GAX21031.18.000e-10158.04hypothetical protein FisN_1Lh297 [Fistulifera sola... [more]
GAX12364.18.000e-10157.74hypothetical protein FisN_1Hh297 [Fistulifera sola... [more]
OEU15061.13.800e-9556.97NAD(P)-binding protein [Fragilariopsis cylindrus C... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR054ncniR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR002ncniR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO28G00310.1NO28G00310.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|606603gene_9131Nannochloropsis oceanica (N. oceanica CCMP1779)gene
jgi.p|Nanoce1779_2|616129gene_12096Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO28G00310.1NO28G00310.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO28G00310 ID=NO28G00310|Name=NO28G00310|organism=Nannochloropsis oceanica|type=gene|length=3162bp
CTGAAACAGGCTCGAACAGTGCACGCGCGCTGCACACAAATACTATTTCT
CCCTCTCCAACTTTGTCAACACTATGAGCGCCGCCGTCCGCCGCCTCGCC
CTCCTCCAGCCTCGCACCCGCTTGTCTCCTTTGGCTGCCACTACTAGCAG
CACGGCTGTGCGCGCTATGGCCACCATGCCTACGCCCAAGTTTTTCGACT
ACGCCACGGTCAAGAAGgtaggttccgaggaggaagggaaggggaaaggg
aaggacgaaaagaggagacagtcgggtaaagcaaggcatccgcattgaac
agatcaatacacatacatgtaatttatctgtgtatgccgtgatcctcttc
cttcgcctactgaaatttcttcacttatgtactcacatttccccctacct
ccctccatcccgccctcaactcccagACTTTGAATGTGGGCCAGGCCTTC
AAGGCCGTGGAAGAGGCGTTTGCTATGCTGGCTGATGGGAAGGTGGACGT
GCCGCAGgtaggacataagaaaaataagcacggttgggaagtagggagag
agaaagagttctggcgttgtctttgacaatagaaactcggtatgtcacac
atacacttcccccttacttccctccctccctctccagCCAATGCACATTG
GCATCCATGAGACACCCACAGCGGGACCGGGCGACTGCCACATTAAGgta
agcctcgaaggtgtaaagaaccctctgtccctctctccccccgtctgcct
ccgtccctctcccccccggcctccctcccgcccttatcccttcccccccc
tcccccctccctccttccagGGAGGGTACATTGAGGGCAAAACAACGTTT
ACAGTGAAGCTGGCCACGGTCTCCTTCTACAAGAACATGGCCAAAGGCCT
TCCTCCCGGAGCGGGTATCTTTGTCGTCTGTGACGCCACCAATGGCGCGC
CCGTCGgtaagcaatccctccctccctccctccctccctttctcgctcat
tctccgtaaggcaagtccttccctccctccctccctccctccctccctcc
ctatcttcacgtccttgtcatcgtgtacatattctcgtgcctgccttttt
gatcctccctccctcccttccttcctccccccctccctccacccttccct
tagGCGTTTTCCAAGAAAACCGTTTCATGACGGACCTCCGCACCGGTGCC
GCTGGTGGCATTGCCGTTAAATATTTCGGATCCTCGCCGAAGCACACTTC
CGTTGGCTTCGTGGGCACTGGAGCCATTGCCAAAGTAATGGCACAGgtaa
agcctctctccctccctccctccctcccctccctctccccctccctcccc
ctttcccgatgttgccatcttactgacacaaaaagcacccgtccttccct
ccctccctccctctctctcttcctccagGGCGCCGCCGTGGCCCACAAAT
TTAAGCAAGGATATGCATATGGCCTGGACCCTGCCATGTCCGCCTCCTTT
GCTAAGGAAATCGAAGCCGAGCTCGGCTACCCCGTCAAGgtacaccctct
ttcccccccctccctcccctctctccctcctctcccttcccggcctgtgg
tctcgacaccaccacaggtctgcgccacggcatgcattttttcctccccc
ccatatgtctgcgcgtgtgacgattcgtccccactcaccgattccccctc
ccttccttccctccctcccttccttccctccccatcacagGTCTGCGCTA
CGGCCGAGGAGGCCGTTCGTGCGTCCGACGTTCTATTCACGCAAACTCCG
GGTAGCAAGCCAGTGCTCGAGCTCTCATGGCTCAAGCCTCACGCCACCAT
TATCGCCTCTGGCAGCGACCAGCCCACCAAAAACGAGATCCCTCCCGAGg
tacgtcctcccttcctcccttcctctctccctccctcccgtcctcccacc
tcttagaaagaccagcattccctgacaattcaatgaactccctccctccc
tccctccctccctccctccctccctccctccccttccctcagGTCCAGGC
CAAGAGCAAATTTATTTGCGATCTGGTCCGTCAGTGCTCCCGCTTGGGCG
AGCTCCGCACAGgtagggatggagggagggaggaaggaaggaagggaggg
aaggaaggatggaagaaagggagggaaggaaggatggaaggaagagaggg
aggtagggaaggaggcagggagggagggagggagtgagggagggtgatac
caatctctacaggagaactcctacactgtcccctccctccctccctccat
ccctcctccagGCATTGCCAGCGGGCTTGTGAAAGAGAGTGACGTCCACG
CGGAGATCGGGGAGGTTGTGAGCGGGAAAAAAAAGGGTAGGGAAGGCGAT
GAACTCATCCTCGTCGATTTGACGGGCACGGGCGCACAGgtagggaggga
gggctggagggaggggagggggtatggagggagggaggggaaaatagtca
ctcaaacacaagacatccaatctttggattaactatatttccttttgaac
gcggccctccctccctccttccctccctctcttcctctttccccccctct
agGACGCGGCCATCGGGCAGGTGGCATGGGACATTCTGAGCAAGAAGTAG
TGAAGAAATAAACAAGATATGAAGAGGGGGAAGGAGGGGTGGGTTTAATC
AAGTTAAAAAAAGATTTAAAAACAAAAGGTGTGCGAACACCAGAAGGGAG
GGACAAAGACGAGTCCACGGTCTTGGAAATGCGGGGGAAGGGAAGAAGGA
GGGAAGGTGTCTTAGAGCATACGGGTGGGCCGGTTGGTGAAGGTGTTTGT
TCTAAATGTCCATTGTTTTTCAGGGTCATATATGCTCCTCAACGACAAGA
GATCTTCTCAAATCAGGCCTATCGACAGCATTGTGGGCCCACGGGATTGA
GCCATGCTCTATTTGTGTCATAGAGAGCAAAGGCATGTGAGAAGGGGATG
GCTGAGGAGTGTGGTGTAGATGGCTGTGATGTAGAAGTAGAGAAAGAGGA
AGAAGGGGAAGAAGAAGAGAAAGAAAATTAGGGAGAGGAAGAGAAAGAAG
AACAGGGAGGGGAAGAGGAAAAGAAAGAAAATACAAAAGAAGATGATAGT
GTTAAAGACTGG
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protein sequence of NO28G00310.1

>NO28G00310.1-protein ID=NO28G00310.1-protein|Name=NO28G00310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=360bp
MSAAVRRLALLQPRTRLSPLAATTSSTAVRAMATMPTPKFFDYATVKKTL
NVGQAFKAVEEAFAMLADGKVDVPQPMHIGIHETPTAGPGDCHIKGGYIE
GKTTFTVKLATVSFYKNMAKGLPPGAGIFVVCDATNGAPVGVFQENRFMT
DLRTGAAGGIAVKYFGSSPKHTSVGFVGTGAIAKVMAQGAAVAHKFKQGY
AYGLDPAMSASFAKEIEAELGYPVKVCATAEEAVRASDVLFTQTPGSKPV
LELSWLKPHATIIASGSDQPTKNEIPPEVQAKSKFICDLVRQCSRLGELR
TGIASGLVKESDVHAEIGEVVSGKKKGREGDELILVDLTGTGAQDAAIGQ
VAWDILSKK*
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Synonyms
Publications