NO28G00270, NO28G00270 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G00270 vs. NCBI_GenBank
Match: CBJ26931.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 164.1 bits (414), Expect = 6.000e-37 Identity = 77/208 (37.02%), Postives = 113/208 (54.33%), Query Frame = 0 Query: 50 PKEFDFYLLATFWPAELCHRETTNSCQYPQDWWKVNLTGHGLWPNNNDGTYPTSCGGAPFNDSIPEETIGMPIMTTYWPNFQYDVEDGEELYDNLWEHEWNKHGTCTGLDQYIYMTTTLAGIMN--ATPRLLSQTAXXXXXXXXXXXXXXPLLTLQNAFGGPTMAVLQCTSHKYLTGVFTCWSKNNETNLPYARIPCPAAVL-DEGTC 255 P +F+ Y+ A W AE C+ + C+ P+ +W+ NLT HGLWP+ DGTYPT+C P++ IG+ ++ T WPN Q E + YD+ WEHEW KHGTCTGL Y +T ++ + TP L++ + L++A+GG MAVL C +L V+ C + ET+LP ++ CP AV+ + TC Sbjct: 85 PGDFNLYIFAMSWKAEWCYHQNFPGCKKPRSFWEKNLTIHGLWPDYGDGTYPTTCSSEPYDHDRVVNAIGLDVLETMWPNIQVPEEFAGKKYDSFWEHEWTKHGTCTGLSMEEYFSTAISLLQRRFLTPPQLAENVGGQTTR----------VDLEDAYGGEGMAVLDCRGKVHLNQVYLCLEPDPETHLPGEQVACPPAVVAHDDTC 282
BLAST of NO28G00270 vs. NCBI_GenBank
Match: EWM20292.1 (conserved unknown protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 152.9 bits (385), Expect = 1.400e-33 Identity = 70/116 (60.34%), Postives = 82/116 (70.69%), Query Frame = 0 Query: 151 KHGTCTGLDQYIYMTTTLAGIMNATPRLLSQTAXXXXXXXXXXXXXXPLLTLQNAFGGPTMAVLQCTSHKYLTGVFTCWSKNNETNLPYARIPCPAAVLDEGTCQKGGDVVVPLFK 267 KHGTCTGLDQY YMTTT+AGI ATP LL + A PL L+ AFGGP MAVL C KYLTGV+TCW+K++ T+ PYAR+ CP AV+ EGTC KGG+VVVP+FK Sbjct: 23 KHGTCTGLDQYTYMTTTIAGITTATPTLLGEMAATAAAASPPHPPSLPLPDLETAFGGPGMAVLMCNGKKYLTGVYTCWTKDSGTHKPYARMQCPPAVVAEGTCPKGGEVVVPIFK 138
BLAST of NO28G00270 vs. NCBI_GenBank
Match: GAX99438.1 (Hypothetical protein PINS_007264 [Pythium insidiosum]) HSP 1 Score: 148.7 bits (374), Expect = 2.600e-32 Identity = 74/208 (35.58%), Postives = 106/208 (50.96%), Query Frame = 0 Query: 53 FDFYLLATFWPAELCH--RETTNSCQYPQDWWKVNLTGHGLWPNNNDGTYPTSCGGAPFNDSIPEETIGMPIMTTYWPNFQYDVEDGEELYDNLWEHEWNKHGTCTGLDQYIYMTTTLAGIMN---ATPRLLSQTAXXXXXXXXXXXXXXPLLTLQNAFGGPTMAVLQCTSHKYLTGVFTCWSKNNETNLPYARIPCPAAVLDEGTCQ 256 FDFY+LA W E CH + C P+D+W+ + T HGLWP G +P C G F+ + EE +G+ ++ +WPN + VE G Y + W HEW +HGTC+GL+Q Y + + I N +TP L+ Q + G VL+C + +L FTCW+K++ TN P R CPA +L E TC+ Sbjct: 64 FDFYVLAVSWQPEFCHGKEQEYPGCVKPRDFWRSHFTLHGLWPERERGKHPGFCHGPAFDPAAVEEAVGLDVLLQFWPNVK--VEAGSADYVDFWRHEWTRHGTCSGLEQTTYFSRAVDIICNGTLSTPALVQQNVGKSVSTADLRAAFKRDVDGDEDDDG--NVVLKCDHNNHLAQAFTCWAKDDATNEPTTRRACPAHILSEDTCR 267
BLAST of NO28G00270 vs. NCBI_GenBank
Match: OQR86380.1 (hypothetical protein ACHHYP_10610 [Achlya hypogyna]) HSP 1 Score: 147.9 bits (372), Expect = 4.500e-32 Identity = 76/214 (35.51%), Postives = 109/214 (50.93%), Query Frame = 0 Query: 53 FDFYLLATFWPAELCHRETTNSCQYPQDWWKVNLTGHGLWPNNNDGTYPTSCGGAPFNDSIPEETIGMPIMTTYWPNFQYDVEDGEELYDNLWEHEWNKHGTCTGLDQYIYMTTTLAGIM-NATPRLLSQTAXXXXXXXXXXXXXXPLLTLQNAFGGPTMAVLQCTSHKYLTGVFTCWSKNNETNLPYARIPCPAAVLDEGTCQKGGDVVVPLF 266 FDFY+ A W A C+ E C+ P+ +WK + T HGLWP N G +P C P + + + IG + YWPN + V YD+ W HEW +HGTC+GLDQ + + + I N TP + + L++A+GGPT AVLQC +K L+ V+TC +K+ + N P C VL E C G++++P F Sbjct: 40 FDFYVFAHSWQASFCYHEPYPGCKEPEAYWKTHFTVHGLWPELNKGPHPGFCSKEPLDIKLVRQAIGEDTLEEYWPNVKVAVNTTG--YDSFWNHEWTRHGTCSGLDQVTFFQSAIDLIKDNGTPDFVQKNVGNVVSTK----------ELRDAYGGPTKAVLQC-KNKRLSQVYTCLAKDKD-NKPTEATDCSPQVLKEDNCHV-GEILIPKF 238
BLAST of NO28G00270 vs. NCBI_GenBank
Match: GAX99751.1 (Hypothetical protein PINS_007583 [Pythium insidiosum]) HSP 1 Score: 146.0 bits (367), Expect = 1.700e-31 Identity = 74/208 (35.58%), Postives = 105/208 (50.48%), Query Frame = 0 Query: 53 FDFYLLATFWPAELCH--RETTNSCQYPQDWWKVNLTGHGLWPNNNDGTYPTSCGGAPFNDSIPEETIGMPIMTTYWPNFQYDVEDGEELYDNLWEHEWNKHGTCTGLDQYIYMTTTLAGIMN---ATPRLLSQTAXXXXXXXXXXXXXXPLLTLQNAFGGPTMAVLQCTSHKYLTGVFTCWSKNNETNLPYARIPCPAAVLDEGTCQ 256 FDFY+LA W E CH + C P+D+W+ + T HGLWP G +P C G F+ + EE +G+ ++ +WPN + VE G Y + W HEW +HGTC+GL+Q Y + + N +TP L Q X + G VL+C + +L FTCW+K++ TN P R CPA +L E TC+ Sbjct: 64 FDFYVLAVSWQPEFCHGKEQEYPGCVKPRDFWRSHFTLHGLWPERERGKHPGFCHGPAFDPAAVEEAVGLDVLLQFWPNVK--VEAGSADYVDFWRHEWTRHGTCSGLEQTTYFSRAVDIXXNGTLSTPXLXQQNVGKSVSTADLRAAFXRDVDGDEDDDG--NVVLKCDHNNHLAQAFTCWAKDDATNEPTTRRACPAHILSEDTCR 267
BLAST of NO28G00270 vs. NCBI_GenBank
Match: XP_009838822.1 (hypothetical protein H257_13092 [Aphanomyces astaci] >ETV71634.1 hypothetical protein H257_13092 [Aphanomyces astaci]) HSP 1 Score: 144.4 bits (363), Expect = 4.900e-31 Identity = 75/217 (34.56%), Postives = 107/217 (49.31%), Query Frame = 0 Query: 51 KEFDFYLLATFWPAELCHRETTNSCQYPQDWWKVNLTGHGLWPNNNDGTYPTSCGGAPFNDSIPEETIGMPIMTTYWPNFQYDVEDGEELYDNLWEHEWNKHGTCTGLDQYIYMTTTLAGI-MNATPRLLSQTAXXXXXXXXXXXXXXPLLTLQNAFGGPTMAVLQCTSHKYLTGVFTCWSKNNETNLPYARIPCPAAVLDEGTCQKGGDVVVPLFK 267 K+FDFY+ A W C C P+ +W+ + T HGLWP DG +P C P + +I IG + YWPN + V YD+ W HEW++HGTC+GLDQ + + + I + TP ++Q +++AFGG AVL+C L+ VFTC+ K+ +N+P C A VL E TC+ VV+ FK Sbjct: 38 KDFDFYVFAHSWQPSFCAGTDFPGCWVPELYWESHFTIHGLWPELEDGPHPGFCTKEPLDINIVRSAIGEDTLEKYWPNVK--VAANTTHYDSFWGHEWSRHGTCSGLDQVEFFQSAIDKIKVQGTPAFVTQHVGQSVSTK----------DVRDAFGGAGQAVLKCEHGNELSQVFTCYDKDASSNVPTTLRACSAHVLAEDTCKSTATVVIRGFK 242
BLAST of NO28G00270 vs. NCBI_GenBank
Match: AIG55452.1 (secreted protein [Thraustotheca clavata] >OQS05596.1 hypothetical protein THRCLA_02301 [Thraustotheca clavata]) HSP 1 Score: 143.7 bits (361), Expect = 8.400e-31 Identity = 77/220 (35.00%), Postives = 108/220 (49.09%), Query Frame = 0 Query: 52 EFDFYLLATFWPAELCHRE-----TTNSCQYPQDWWKVNLTGHGLWPNNNDGTYPTSCGGAPFNDSIPEETIGMPIMTTYWPNFQYDVEDGEELYDNLWEHEWNKHGTCTGLDQYIYMTTTLAGI-MNATPRLLSQTAXXXXXXXXXXXXXXPLLTLQNAFGGPTMAVLQCTSHKYLTGVFTCWSKNNETNLPYARIPCPAAVLDEGTCQKGGDVVVPLF 266 +FDFY+ A W C+ E C+ PQ++WK + T HGLWP N+G +P C N + + IG + YWPN + V YD+ W HEW +HGTC+GLDQ Y + + I + TP + ++ L+ A+GGP VLQC K L+ VFTC +K ++ N+P C VL E TC G +V +P F Sbjct: 39 QFDFYVFAHSWQPSFCYHEPYPAQALLGCKEPQEYWKTHFTVHGLWPELNEGPHPGFCSKEELNIDLVRKAIGEVTLEEYWPNVKVPVNSSS--YDSFWNHEWTRHGTCSGLDQVTYFKSAIELIKTHGTPECIQKSVGKTMSTK----------ELREAYGGPKRVVLQCKG-KTLSQVFTCIAK-DKNNVPTKASDCSIQVLKEDTCH-GTEVYLPAF 243
BLAST of NO28G00270 vs. NCBI_GenBank
Match: XP_008617861.1 (hypothetical protein SDRG_13546 [Saprolegnia diclina VS20] >EQC28669.1 hypothetical protein SDRG_13546 [Saprolegnia diclina VS20]) HSP 1 Score: 142.9 bits (359), Expect = 1.400e-30 Identity = 69/215 (32.09%), Postives = 110/215 (51.16%), Query Frame = 0 Query: 52 EFDFYLLATFWPAELCHRETTNSCQYPQDWWKVNLTGHGLWPNNNDGTYPTSCGGAPFNDSIPEETIGMPIMTTYWPNFQYDVEDGEELYDNLWEHEWNKHGTCTGLDQYIYMTTTLAGI-MNATPRLLSQTAXXXXXXXXXXXXXXPLLTLQNAFGGPTMAVLQCTSHKYLTGVFTCWSKNNETNLPYARIPCPAAVLDEGTCQKGGDVVVPLF 266 +FD+Y+ A W A C++E C+ P +WK + T HGLWP N+G +P C P + + IG + +WPN + + YD+ W HEW +HGTC+GLDQ + + + + TP +SQ+ +++A+GGP VLQC + + L+ V+TC K+ + N P C + VL E C + G++++P F Sbjct: 35 QFDYYVFAHSWQASFCYKEPYPGCKAPNPYWKTHFTVHGLWPELNEGPHPGYCSKEPLDMQRVRKAIGQDTLEKFWPNVKVAINTTG--YDSFWNHEWTRHGTCSGLDQVTFFQSAIERMKTQGTPDFISQSVGKVVATS----------AIRDAYGGPKKVVLQCKNQR-LSQVYTCLGKDKD-NKPTDATECSSQVLKEDNC-RVGEILIPAF 234
BLAST of NO28G00270 vs. NCBI_GenBank
Match: XP_012202475.1 (ribonuclease T2 family protein [Saprolegnia parasitica CBS 223.65] >KDO26829.1 ribonuclease T2 family protein [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 138.3 bits (347), Expect = 3.500e-29 Identity = 66/215 (30.70%), Postives = 110/215 (51.16%), Query Frame = 0 Query: 52 EFDFYLLATFWPAELCHRETTNSCQYPQDWWKVNLTGHGLWPNNNDGTYPTSCGGAPFNDSIPEETIGMPIMTTYWPNFQYDVEDGEELYDNLWEHEWNKHGTCTGLDQYIYMTTTLAGI-MNATPRLLSQTAXXXXXXXXXXXXXXPLLTLQNAFGGPTMAVLQCTSHKYLTGVFTCWSKNNETNLPYARIPCPAAVLDEGTCQKGGDVVVPLF 266 +FD+Y+ A W C+++ C+ P +WK + T HGLWP N+G +P C P + + IG + +WPN + + + YD+ W HEW +HGTC+GLDQ + + + + TP +S++ +++A+GGP VLQC + + L+ V+TC K+ + N P C VL E +C + G++++P F Sbjct: 35 QFDYYVFAHSWQPSFCYQQPYPGCKEPNPYWKTHFTVHGLWPEKNEGPHPGYCTKEPLDMQRVRKAIGQDTLEKFWPNVKVAINTTD--YDSFWNHEWTRHGTCSGLDQVTFFQSAIERMKTQGTPDFISKSVGKVVSTS----------AIRDAYGGPKKVVLQCKNQR-LSQVYTCLGKDKD-NQPTNATDCSRQVLKEDSC-RVGEILIPGF 234
BLAST of NO28G00270 vs. NCBI_GenBank
Match: XP_008869363.1 (hypothetical protein H310_06179 [Aphanomyces invadans] >ETW01515.1 hypothetical protein H310_06179 [Aphanomyces invadans]) HSP 1 Score: 137.1 bits (344), Expect = 7.900e-29 Identity = 72/218 (33.03%), Postives = 102/218 (46.79%), Query Frame = 0 Query: 49 APKEFDFYLLATFWPAELCHRETTNSCQYPQDWWKVNLTGHGLWPNNNDGTYPTSCGGAPFNDSIPEETIGMPIMTTYWPNFQYDVEDGEELYDNLWEHEWNKHGTCTGLDQYIYMTTTLAGIMN-ATPRLLSQTAXXXXXXXXXXXXXXPLLTLQNAFGGPTMAVLQCTSHKYLTGVFTCWSKNNETNLPYARIPCPAAVLDEGTCQKGGDVVVPLF 266 A +FDFY+ A W C E C P +W + T HGLWP +G +P C P + + IG ++ YWPN + V YD+ W HEW++HGTC GLDQ + + + I + TP ++Q +++AFGG AVLQC + L+ VFTC+ K+ +N+P C VL E TC V + F Sbjct: 36 AMTDFDFYVFAHSWQPSFCAGEDYPGCSVPDSYWASHFTIHGLWPELANGPHPGFCTKEPLDINSVRTAIGEGVLEQYWPNVK--VAANTTHYDSFWAHEWSRHGTCRGLDQVAFFQSAIDKIKSQGTPDFITQHVGQTVSTK----------DVRDAFGGVNHAVLQCENGNELSQVFTCYDKDVNSNVPTTLRACAPHVLAEDTCTSKSTVFIRSF 241 The following BLAST results are available for this feature:
BLAST of NO28G00270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00270 ID=NO28G00270|Name=NO28G00270|organism=Nannochloropsis oceanica|type=gene|length=1615bpback to top protein sequence of NO28G00270.1 >NO28G00270.1-protein ID=NO28G00270.1-protein|Name=NO28G00270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=267bpback to top Synonyms
Publications
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