NO28G00220, NO28G00220 (gene) Nannochloropsis oceanica

Overview
NameNO28G00220
Unique NameNO28G00220
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2468
Alignment locationchr28:84035..86502 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr28genomechr28:84035..86502 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO28G00220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO28G00220.1NO28G00220.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO28G00220.1NO28G00220.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO28G00220 ID=NO28G00220|Name=NO28G00220|organism=Nannochloropsis oceanica|type=gene|length=2468bp
TCCACTCACGCCTCGCTTCCCTCTTTTGACCCCCACGTCATCACAGCAAG
CTGCGTCCACCAGCTCCTCTTCCACGACGAGCAACAAAGCAAACCAGAAG
AATACAATGACAACAACGACAACAACAACTACAACTACTATTTACACTGC
TTCTAATACTACAACGATGGCGTTCGGGCCCGCAGCCACAGCAGCAGCTG
TGAAGGCAGGAGGTGCAGAATGGGCTGGTCTGGGCGACAGCCGCAGCCGC
AGCGGAGGCGAGGTCAAGACCCTTACCGATGGCAACAGTAACAACAACAG
CAACAACAGCAACAACAGTTACACCAGCAACAGCAACAACAAGAAGAAGG
GGAAGGGCTGCAAGGGCCCTCGCCCGCCTACCCCTGAGAGGGTTCGTGTA
CAGATGGAGGCGGCCCTCAGCCTGCCCAAGCCCAAGAGCAAGAGGGCCAT
TAACAAAAATAAAAGGCGCATCGCCAACAGGGCGGCCAAGAAGGCGCTGG
GCGAAGGCAGGAATGAGGGAGGATTGAAGTCCGCAGAGGTCATCCCTTCG
TTGGTGTTAGGGGAGGAAGGGGGGGAAGGAGGGGGGGCGGGGGAGGGGCA
ATGGGGCAGCAGCGAGGATGACACCTCGAGCACCACAACCACCACCACTA
CCACCACCATCATCACTTCCACGAGCAGCAGCAGCAACGGCAGCGACCTC
AGCGAGAGCAGTAGTGGCAGCAACACCTGTGACACCGGCAAGAGCACCAA
GAGCAGTGGCAGCAGCACTTGCACGGCCCTCGCGCTGTATAAGCCACTGG
ATGTCTTCGTTCCCAGGACCACAATCACTACCTCCACCACCACCACCAAA
CCCTCCACTCTTCTCATTAAGAGCAAGGGCTCGAGCATGCCCTGCATCCT
CTCCGAGAACCTCTCCGTCTCCTCGAAGAAGTTCCGCCGTGCTGCCTCAG
TCCCCGACCATGACTCCCTCCCTGCCTGGCCCGCCTACGCACGCGGACAT
TGCACCGTGCTGGCCTTTCCCCTGCCCTCCCTCGTTCCGACCATCCTCCC
TCCCACTGGGGCAGAGATGAAGAAGGAGGAACAGCAGCAGCTCTCGCTGC
CGGTCGCAGCGACGGGAGCAGGGCACATTTCGTTTGAGGCGTCTGCTGCT
ATTGCTGCTGATAATTATACTGGTAGCGCTGCCGATACTACTACTGCTGC
TGCTGCTACTATTGTTGCTGCTGCAACTACTACAACTACTACTTTTATTG
CTAAATGTACTACTGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTTTGGAG
ACGGAAAATTTCCACCCAATTCACACCATTTGGGAGGCTTTCCCTTTCCT
CCTCCACCTCAACATCTCCGCCTCCTCCTCTTTCACCTCCTCCCCCTCCT
CCACCTCCGCCTTCGCCTCCTCTTTTTCGAAGCTGGATGTGCCTGGCTTG
AGCAACCGCCTCGTCCTCCATCATTCTGTCCAGCCCCTGGATTTGCTGAT
GGGGACGGAGGAAGGGAGGGAGGGAGGGATGGAGGAAGGCACGGAGGGAG
GGATGGAGCAAGGGATGGAGGGAGGGAACGAGGGAGGAATGGAAGAAGGG
GAAGAGGAAATAGAGGAGCGATTTTCGCGCTTAGGATCACCACTTTTCAT
GGAAGAGGAGGACGTGGAGGAGTGGCATGACCACCGTCCCTCCCTCCCTC
CCTCGTTCCTGCAGTCGATCTCTACCTCCATTCGCGCCATTTTGGGGTCA
GCTATGCGGCAGGTGAAGAGGACGTGGGAATGGATCAGGAAGAAAGGAGA
GGCGGGAACGAAGGCAATGCAAGCGATGAGCTGGGTGGCTGGGGGGGGTG
CGAAAAATACGGTCGCTTACGCATTGTCGTAAAAAGAGAGTGGGAGGAGA
GGGAGCGGGGGAAGGGAGAAGGGAAGGGAGAAGGGAAGGAGAGAAAGGGA
GGAAAGGGAGAATGAAAGGAGAAGGAAATAGGGAAGGGAGAGCGGGAGGA
GAGGAAGGGAGGGAGGGAGGAAGGGAGGAACAGTTTCATTATTTATCTAA
CCACGAGGTTTGCGCGAAGCAAGACCCGAAAGAGATTGGAGATAGCGACG
AGAGACAGAAGAAGAGTGTCGACGACAGGAAAGAAAACAAGTTCGAAAGA
AAGACAAAGAGACAGAAAGAGAGGCAGAGAGGGAGAAGACGAAAGGAAAG
AAAACAACAATCATAAAAAAGAAAAAAAGGCAAGTAGATGAAGGTGGAGA
ACGAGAAGATGGAGAACGTGCGAGACGAGAGAGAGGCAGACCAGATGGGA
CTAGGGGAGGGGGTCCACCTGTGAGACACAGAGATACAGAGATACAGAGA
CACAGAGATACAGAGATACAGAGACACAGAGATACAGAGACACAGAGACA
GAGACACAGAGACACAGAGATACAGAGACACAGAGATACAGAGACACAGA
GACACAGAGACACAGAGA
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protein sequence of NO28G00220.1

>NO28G00220.1-protein ID=NO28G00220.1-protein|Name=NO28G00220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=592bp
MTTTTTTTTTTIYTASNTTTMAFGPAATAAAVKAGGAEWAGLGDSRSRSG
GEVKTLTDGNSNNNSNNSNNSYTSNSNNKKKGKGCKGPRPPTPERVRVQM
EAALSLPKPKSKRAINKNKRRIANRAAKKALGEGRNEGGLKSAEVIPSLV
LGEEGGEGGGAGEGQWGSSEDDTSSTTTTTTTTTIITSTSSSSNGSDLSE
SSSGSNTCDTGKSTKSSGSSTCTALALYKPLDVFVPRTTITTSTTTTKPS
TLLIKSKGSSMPCILSENLSVSSKKFRRAASVPDHDSLPAWPAYARGHCT
VLAFPLPSLVPTILPPTGAEMKKEEQQQLSLPVAATGAGHISFEASAAIA
ADNYTGSAADTTTAAAATIVAAATTTTTTFIAKCTTAAAAVAAAAALETE
NFHPIHTIWEAFPFLLHLNISASSSFTSSPSSTSAFASSFSKLDVPGLSN
RLVLHHSVQPLDLLMGTEEGREGGMEEGTEGGMEQGMEGGNEGGMEEGEE
EIEERFSRLGSPLFMEEEDVEEWHDHRPSLPPSFLQSISTSIRAILGSAM
RQVKRTWEWIRKKGEAGTKAMQAMSWVAGGGAKNTVAYALS*
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Synonyms
Publications