NO28G00200, NO28G00200 (gene) Nannochloropsis oceanica

Overview
NameNO28G00200
Unique NameNO28G00200
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2255
Alignment locationchr28:79333..81587 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr28genomechr28:79333..81587 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO28G00200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO28G00200.1NO28G00200.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO28G00200.1NO28G00200.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO28G00200 ID=NO28G00200|Name=NO28G00200|organism=Nannochloropsis oceanica|type=gene|length=2255bp
GAGGGAGGGAGGGAGTGAGGGAGTGGGGGAACGAGGGAGGGAGGACGTCA
TCCTCCTTCCACTCCTCACCCTTATTGGAGCATATGTACCTTTTTACACA
TAATTACATCTCTAGTGTATATATATATATAAAAATTATCTCTCTCTATA
TATATATTATTTTCTCCTTTCCCTCATTCGTGCACATGCATATTCTTCAT
AGCATCTCGCGCCTGAGGCTAAACTCACCCGAGGACAGGAAACTCCTTCT
CAGAGATCCCCGCTTCACGgtacgtccctcctcatcacctcctttccctc
ccctccctccctccctccctccctcctttccctcccctccctcccttccc
tcccctccctcccttccctcccctcccttcctaccgcctctttctagcct
ggaccaccgcggcgtcttctcgccctccttccctccctcttttcttcctt
ccctccctccgtccggtccctcccgcctactttttccacgcctccttcct
ccctcctcatcacctctcctttctccctccctccttccctccattcccca
gGACCTCATCGCCCGCCTTCCTCCCCTCCTTCCTTCCACCTCCCCTCGGG
CACTGGCCAACATCATTCATGCCCTTTCCAAGCTACGgtagggagggagg
gaaggagggagggaaggggaaagggaggggtatccctaagtgctaggcag
tgagcgaccttcctccatggctcgttacctaaatttcatttatctcagtt
tcctaatcaaattcctaatttccatttcatctccttcctaatcaaattcc
taatttccatttcatctccttcctaatcaaattcctaatttccatttcat
ctccttcctaatcaaattcctccccaatcaatttcctaactcccacttta
tctccttcctaatcaactttcttcaaacagATATTATCCAGAGGAGCCTC
TCTTAGAAAGCTTGCTGGAGATGATGGAGCGACACgtacgtactttccct
tcctccttccctccctccttcactcccttcttccctcccttcttccctcc
ctccttccctccaccccctttaactcaaacaccatcgtctttcttctttc
actccctcccttcctccccctcttcctccttagCTCCCATCCTTCAAGCC
CGCCGAGCTCTCCATGGCCACATCCGGCATCTCACGCCTCCTCTCTACCA
CCTCCTCCTCCTTCTCCTCCTCCTCTTCTTCCACTCTCCCACGCCCCTCC
TTCCTCCTCTCCCTCCACGCGGCCATCGTCCCGATCTTTGTGGTTAGCGC
CAATGAGGGAGCAAGGGAGGGAGGGAGGGAAGGAGGGAGGGAGGGAGGGA
AGGAGGAGGAAGGCCTCCTCGGCTCTCCCCACTTGGCCCTCACGCTTTCG
GCCATCGTCCGTTTGGAGAGAGGGAGGGAGGGATTCGGGGAGGGAGGAGT
GTTTCGAGGGGAAAAGAAGTTCTTGACGCTGCTGGCGGCGAGGGCGGGAG
AGAGGGCGGGAAGGATGGAGGAGTGGGAACGGGTGATGGTGAGAGAGGGG
ATAGCCACGTTAGGTGGTAAGGTGCCGGAGGCGCTGAGGGAGGGAGGAAG
AAGTGAAAGAGGGAGGGTGTAATTGGTAAATGCTTACACTGAATGGCCAA
GGCGTAAGGTTTGGGAGACGAGATTTAAAAGTAGTAGGGTGAGTTATGAA
ACGAAGAGAAGCAGGAGAAGTGTGTGAAAGAAACACACATAGAGACAGCG
AGAGAGAGGTGAGAAGATGAAAGAGGAGAGTAGAACGGGGTAGAGGTAAG
GGAAAGAAAGATTCTTAATCACGGGTTGGACCCGTGTCCCTCTTGATGAT
AGGATAGAAAGGCGATGGCTACAACAAATGGAGTATGAAGTATGAAGTGA
ATGAGTTGTAAAGAAGACATAGTGAAAGGCAGGGGATGACCACTATAGTA
GGAGTTTGAAGTAAATGAGTAGTAAAGAAGACACAATGAAAGGCCGGGGA
TGGTAGTAGGAGGAGTATGAAGTGAATGACAAGAAAAGACATAGTAAGTG
GCAGAAGATGGTAGTGGAAGGCGTGCCTGGTGAATGAGTAATATAGACAT
TTAGTCAGTCAATCGAACGTGAGAGTCCCAAAAACAGGTGCATAGGGCAA
TTTAATCGTTTGAATCCATTGCAATGCTTATGCGAATTCCAAAGGACACG
CCGCTTGAAAGACGATGCGAAGCGAAGGGAGGGGACTCCACGAATTTTGT
TGTCG
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protein sequence of NO28G00200.1

>NO28G00200.1-protein ID=NO28G00200.1-protein|Name=NO28G00200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=272bp
MYLFTHNYISSVYIYIKIISLYIYIIFSFPSFVHMHILHSISRLRLNSPE
DRKLLLRDPRFTDLIARLPPLLPSTSPRALANIIHALSKLRYYPEEPLLE
SLLEMMERHLPSFKPAELSMATSGISRLLSTTSSSFSSSSSSTLPRPSFL
LSLHAAIVPIFVVSANEGAREGGREGGREGGKEEEGLLGSPHLALTLSAI
VRLERGREGFGEGGVFRGEKKFLTLLAARAGERAGRMEEWERVMVREGIA
TLGGKVPEALREGGRSERGRV*
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Synonyms
Publications