NO28G00180, NO28G00180 (gene) Nannochloropsis oceanica

Overview
NameNO28G00180
Unique NameNO28G00180
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2659
Alignment locationchr28:73607..76265 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr28genomechr28:73607..76265 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO28G00180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO28G00180.2NO28G00180.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO28G00180.1NO28G00180.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO28G00180.2NO28G00180.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO28G00180.1NO28G00180.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO28G00180 ID=NO28G00180|Name=NO28G00180|organism=Nannochloropsis oceanica|type=gene|length=2659bp
TCTTTTCTTTTTGGCTCGTTCTCCTTATTTATCTACATCTTTATCTTTAT
CCCTCTCTCGCCATTGCTTGGCCTTTGCCCTCCCTCCTCCACTTCATGAT
TGTCCTCACTGCCAATGACAATTCTTCTTGTCGGTCACGGCCCATTTTAC
GCCTCTCCGGAGGCCTCGCTGTCTTTGATCCGACACGCTCCCATGTAGTG
TAGCTTCGCTTGTTCTGCTGCCATCGTGCTTTCCTACCGAAACACACTAC
GTTGGCATCGACGGGTGTACTGCAATTGGTCGATGGCTTTGTCTCCGTTG
TCGTTTTTCTTTTTTGGTTGCCTTGTTGAGCTCTCGGTCGACGACAAGCA
GCAGCAGCAGTAATGCAGCAGCAGCACAAGCAGCAGCGGCAGTAGCATGT
AAAGGATGCCCTTCTTCTCCCCCTCTCTCCCTCTTTCTCGACAAAGCGCG
CATCTCCACCAAGTCTACACCCTCCCCTTGCCTCACACAAGGCCTAGATA
GCATGTTGCGCAGAGGGCAAATTGTTTCCGTCTTTTTCCGGCACGTTCGC
GCACGAGAGATCTCAAACCTCTCCCTATGCCCCCCCTTGTCCTCCCTCCC
CCTATCCTTTTTCCAAGCCCCACCACCATGCTCCTTAATGTCATTGGGAC
CGCAGACAGTGGCAAATTAAAGGTGGGCCAAGTCAAGGACAAGTGGGAGG
AAGAGGAGGAGGGGGAGGATTGGATCGTAGTCGGGCCGAGTGGCAGCGCC
GCGGGTAGTAGTCTCGAGGGGGGCAAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCCAGGACAAGGCGAAAACGAGGATAAAAAGGTCGACA
AGGGGGAGGAGAAATTAAGAAGACCGATGAGCGAAAGgtgtgtacatata
tcaattttaatagtctaagtgaatgtaactgaaattttgttcccatacga
cggcagatatctaacccttccttcatttcctctctctctccctccttccc
ttccatccctccctctttccctcttctccctccttcacctcttcctccct
cttagATACGACGAGATCTTTCTTCGGGATACTCCCTCCCTCTTTTTCGA
CTTCCTCTCCTCCTCCTCCTCCCCCCTTCCTCCTCCTCCTCCTCCTCCTC
TTCCTCCTTCTCCTTCCCTTCCTCACTTCACCCCTCCGAAGAAGAGAAAG
GCATTGCCATGAGCAGGGGAGGAGAATGGAGGGAGGAGAGGGAGGGAGAG
AGGGAAGGCTGGCGAAGACGAAGACCAGGGGGAGCAGGAGACTTGACGTC
ATCCTGGTCATGGCAGTCATCGTCGGTATCACCGAgtgcgtttttctcaa
agctccctccctccgtccctctctccctccctccatccttccctttctta
ctcctccccctcctccttccgcccctccttcactctttctccgccatcat
agatgtcatccgacgtcaactccctctctccctccctccccccctccatc
cctccctcccaatccctccctccctccctcccttcctcagGCACCAGGCT
TCTCGGCGTCTTATGTTCGCCTCTCAAAACCCTGGCCCATATGAGGACTA
GAATAGgtgagggaggagggagggagggagggagagcgggtactaccact
ggataatatcatcaccgatcacctccctccctccctcccttccttcctcc
ttcctcccttcctccctttttcgtagGCGTCCCGAGTCCCACCTCCTCCT
CCTCCACCTCGTCCTCCTCCTCCTCCTCCTCCCTCTCCGACAGCCCGAGG
GAGGAAGACAAAGACAAGGACGGGAAGGCGGAGGGGAGAGAAGAGAAAAA
AGAGAACGAAAATAAGAATGAGGAGGAGGAAGAGAAGGAGGAGGAGAAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGCAAGATGAAAACCCCGAGC
ACGAGAGTTCCTCCTCTTCCGTCCTCATCCTGGTGGTGGTGGAAAGGAGG
AGGTGGAAGGGGGGAGGGAGGGAGGGAGGGAGGGATGGCCAAGGGGTGGC
TGACACCTGAGGATGTGTTAGTGCCCAAGGCGAGGCAATGTCGACTGCTG
GCAGAAGGAGGGAGGGAGGGAGGAGGAGGACAGGGAGGGGGAGGAGAAGG
GGGAGGGAAGGTGGTGGCTGCGGCAGGGgtaagtgaatctcagacggtcg
tcttacggctgccctccttccctccctccctccctccttcccttcctccc
tccttcccgcggagctctgcgtactcaccctccctccctccttccctccc
tccttccctccctcagTCCCTCCTTCACCTCACCCGCCAGGCCATCGACC
TCTCCTCTCCTCCAGTGCGTCTCCTCTTCAAGAAGGGCGTCAGCTGTACC
CATCTGTACATGTCGTACGTCGGGAACCATGTACAGAGATGGTGGGAGGA
CGAGGAAGGGAGCGACAGGGAGGGCGAGGAGGAGGAAGGGGAGGTGGAGG
GGCAGAAGACGAAGGGGAGCGAGGGTATACGGACGGGAATGGATGGGGTG
ATGGAGAGGGAGGAAAGGAGGGAGGGAGGGGTGGTGATGGAGTTGTCGCC
GTATCAGAGGACGAGGGATGTGGTGGGAGGGCAATGAGGGAGGGAGGGAG
GGAGGGAGG
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protein sequence of NO28G00180.2

>NO28G00180.2-protein ID=NO28G00180.2-protein|Name=NO28G00180.2|organism=Nannochloropsis oceanica|type=polypeptide|length=322bp
MSRGGEWREEREGEREGWRRRRPGGAGDLTSSWSWQSSSVSPSTRLLGVL
CSPLKTLAHMRTRIGVPSPTSSSSTSSSSSSSSLSDSPREEDKDKDGKAE
GREEKKENENKNEEEEEKEEEKEEEEEEEEEESKMKTPSTRVPPLPSSSW
WWWKGGGGRGEGGREGGMAKGWLTPEDVLVPKARQCRLLAEGGREGGGGQ
GGGGEGGGKVVAAAGSLLHLTRQAIDLSSPPVRLLFKKGVSCTHLYMSYV
GNHVQRWWEDEEGSDREGEEEEGEVEGQKTKGSEGIRTGMDGVMEREERR
EGGVVMELSPYQRTRDVVGGQ*
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protein sequence of NO28G00180.1

>NO28G00180.1-protein ID=NO28G00180.1-protein|Name=NO28G00180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=322bp
MSRGGEWREEREGEREGWRRRRPGGAGDLTSSWSWQSSSVSPSTRLLGVL
CSPLKTLAHMRTRIGVPSPTSSSSTSSSSSSSSLSDSPREEDKDKDGKAE
GREEKKENENKNEEEEEKEEEKEEEEEEEEEESKMKTPSTRVPPLPSSSW
WWWKGGGGRGEGGREGGMAKGWLTPEDVLVPKARQCRLLAEGGREGGGGQ
GGGGEGGGKVVAAAGSLLHLTRQAIDLSSPPVRLLFKKGVSCTHLYMSYV
GNHVQRWWEDEEGSDREGEEEEGEVEGQKTKGSEGIRTGMDGVMEREERR
EGGVVMELSPYQRTRDVVGGQ*
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Synonyms
Publications