NO28G00160, NO28G00160 (gene) Nannochloropsis oceanica

Overview
NameNO28G00160
Unique NameNO28G00160
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4284
Alignment locationchr28:65606..69889 -

Link to JBrowse

Properties
Property NameValue
DescriptionFAD dependent oxidoreductase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr28genomechr28:65606..69889 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0016491oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf
IPR006076FAD-dep_OxRdtase
Homology
[Close]
BLAST of NO28G00160 vs. NCBI_GenBank
Match: WP_006298283.1 (NAD(P)/FAD-dependent oxidoreductase [Hylemonella gracilis] >EGI76473.1 FAD dependent oxidoreductase [Hylemonella gracilis ATCC 19624])

HSP 1 Score: 369.0 bits (946), Expect = 2.300e-98
Identity = 205/398 (51.51%), Postives = 263/398 (66.08%), Query Frame = 0 
Query:   95 VDVLVCGAGVVGLAIARAFARAGREVLVVEAEKSFGTQTSARNSEVIHAGIYYPPGSLKASLCVRGRQMLYTFCEEHGVPFRRCGKLIVATSDKGDDGQRLEALYHQAHSNGVIDLQRLSSRDVARMEPHVHCMQALFSPSTGILDSHQFMLALLGDAEDHGASIAYRSRVQIKEVSPAGFVSLTTVEGEGKEPSTDLRPRLFINTTGLSALPLARQIGRRPAGLPP--FPPPSYAKGNYFRL-GPPPLPSXXXXXXXXXXXFNCLVYPLPETAGLGIHATIDLGGQVRFGPDVEWVS----DPDDLSVNPSRAESFYASIRRYFPSLQDGQLVADYAGIRPKIQSPHDKTASDFILEGGPSSSGGGREGGMEGIINCVGIESPGLTASLAIAEWVKQ 486
            VDV+V GAGV+GLA+ARA A +GREVLV+EA  + GT TS+RNSEVIHAG+YYP G+LKA LCV+GR MLY +C E GV  RRCGKL+VATS+      +L+A+  QA +NGV DLQ LS  +   +EP + C+ AL SPSTGI+DSH  MLAL GD E+ G  + + + V    V P G + +  V+      ST LR R F+N  GLSA  LARQI     GL P   P   YAKG+YF L G  P              F+ L+YP+PE  GLG+H T+DLGGQ RFGPD EW+S    D  D +V+P+R ESFYA +RRY+P LQDG L   Y+G+RPKI +P D+ A+DF+++       G  + G+ G++N +GIESPGLT+ LA+ EWV+Q
Sbjct:   16 VDVVVAGAGVIGLAVARALALSGREVLVLEAASAIGTGTSSRNSEVIHAGLYYPTGTLKARLCVQGRDMLYAYCAERGVSHRRCGKLLVATSEA--QLPKLQAIAAQAAANGVHDLQWLSRDEAQALEPALQCVAALHSPSTGIIDSHGLMLALQGDLENAGGQVVFNTPVTRATVMPDG-IEIEAVD-RASGSSTRLRARTFVNAAGLSAPALARQI----QGLNPRHVPTAHYAKGSYFSLAGRAP--------------FSRLIYPMPEGGGLGVHLTLDLGGQARFGPDAEWLSVDTADQIDYTVDPARGESFYAEVRRYWPGLQDGALQPAYSGVRPKISAP-DEAAADFVIQ-------GPADHGVPGLVNLLGIESPGLTSCLAMGEWVRQ 383
[Close]
BLAST of NO28G00160 vs. NCBI_GenBank
Match: WP_015013989.1 (NAD(P)/FAD-dependent oxidoreductase [Acidovorax sp. KKS102] >AFU45972.1 FAD dependent oxidoreductase [Acidovorax sp. KKS102])

HSP 1 Score: 369.0 bits (946), Expect = 2.300e-98
Identity = 204/392 (52.04%), Postives = 258/392 (65.82%), Query Frame = 0 
Query:   95 VDVLVCGAGVVGLAIARAFARAGREVLVVEAEKSFGTQTSARNSEVIHAGIYYPPGSLKASLCVRGRQMLYTFCEEHGVPFRRCGKLIVATSDKGDDGQRLEALYHQAHSNGVIDLQRLSSRDVARMEPHVHCMQALFSPSTGILDSHQFMLALLGDAEDHGASIAYRSRVQIKEVSPAGFVSLTTVEGEGKEPSTDLRPRLFINTTGLSALPLARQIGRRPAGLPP--FPPPSYAKGNYFRL-GPPPLPSXXXXXXXXXXXFNCLVYPLPETAGLGIHATIDLGGQVRFGPDVEWVSDPDDLSVNPSRAESFYASIRRYFPSLQDGQLVADYAGIRPKIQSPHDKTASDFILEGGPSSSGGGREGGMEGIINCVGIESPGLTASLAIAEWV 484
            VD +V GAGVVGLA+ARA A  GREV+V+EA  + GT TS+RNSEVIHAG+YYP GSLKA LCVRG+++LY +C E GVP RRCGKL+VATS    D   LE +  +A +NGV+DLQRLS  +   MEP + C+ AL SPSTGI+DSH  MLAL GD E  G  +A  S + +  +  +  + L  V+G      T LR R  +N  GL A  LA + G    GL P   P   YAKGNYF L G  P              F+ L+YP+PE AGLG+H T+DLGGQ +FGPDV+WV  PDDL V+P+R ++FYA +R+Y+P LQDG L   YAG+RPKI  P D  A+DF+++ GP+        G+ G++N  GIESPGLT++LAIAE V
Sbjct:    5 VDCVVVGAGVVGLAVARALALQGREVMVLEAADAIGTGTSSRNSEVIHAGLYYPAGSLKARLCVRGKELLYAYCAERGVPHRRCGKLLVATSAAQLDS--LEGIQARARANGVLDLQRLSREEALEMEPALACVGALHSPSTGIVDSHALMLALQGDLEHAGGVVALNSPLALASIG-SDAIDLEAVDG------TRLRARTVVNAAGLHAPALAARFG----GLAPQHVPTAFYAKGNYFTLTGKAP--------------FSRLIYPVPEAAGLGVHLTLDLGGQAKFGPDVQWVDSPDDLQVDPARGDAFYAEVRKYWPGLQDGALAPGYAGMRPKIHGP-DAPAADFVIQ-GPTVH------GVAGLVNLFGIESPGLTSALAIAEHV 361
[Close]
BLAST of NO28G00160 vs. NCBI_GenBank
Match: WP_044403040.1 (NAD(P)/FAD-dependent oxidoreductase [Acidovorax temperans] >KJA08821.1 FAD-dependent oxidoreductase [Acidovorax temperans])

HSP 1 Score: 365.9 bits (938), Expect = 1.900e-97
Identity = 203/394 (51.52%), Postives = 257/394 (65.23%), Query Frame = 0 
Query:   95 VDVLVCGAGVVGLAIARAFARAGREVLVVEAEKSFGTQTSARNSEVIHAGIYYPPGSLKASLCVRGRQMLYTFCEEHGVPFRRCGKLIVATSDKGDDGQRLEALYHQAHSNGVIDLQRLSSRDVARMEPHVHCMQALFSPSTGILDSHQFMLALLGDAEDHGASIAYRSRVQIKEVSPAGFVSLTTVEGEGKEPSTDLRPRLFINTTGLSALPLARQIGRRPAGLPP--FPPPSYAKGNYFRL-GPPPLPSXXXXXXXXXXXFNCLVYPLPETAGLGIHATIDLGGQVRFGPDVEWVSDPDDLSVNPSRAESFYASIRRYFPSLQDGQLVADYAGIRPKIQSPHDKTASDFILEGGPSSSGGGREGGMEGIINCVGIESPGLTASLAIAEWVKQ 486
            V+ +V GAGVVGLAIAR  A  G EV+V+EA  + GT TS+RNSEVIHAG+YYP GSLKA LCV GRQ LY + +E GV  RRCGKL+VAT+D+  +G  L ++Y +A SNGV DLQ L       MEP + C+ ALFSPSTGI+DSH  MLAL GD E+ G  +A  S + +  ++  G + L   EG      T LR RL IN  GL A  LARQ     AGL P   P P +AKGNYF L G  P              F+ LVYP+PE AGLG+H T+DLGGQ +FGPDV+WV   DDL V+P R ++FYA +R+Y+P+L DG L+  YAGIRPKI  P  ++A DF ++       G ++ G+ G++N  GIESPGLT+SLA+A+ V +
Sbjct:    4 VECVVVGAGVVGLAIARKLALQGLEVMVLEAADAIGTGTSSRNSEVIHAGLYYPTGSLKARLCVAGRQQLYAYAQERGVEHRRCGKLLVATADEQREG--LRSIYDRALSNGVTDLQWLDRAQAQAMEPALECVAALFSPSTGIIDSHGLMLALQGDLENAGGLVALNSALALASIA-QGAIDLVATEG------TRLRTRLLINAAGLHAPQLARQF----AGLDPVHVPKPRFAKGNYFTLSGKAP--------------FSHLVYPVPEAAGLGVHLTLDLGGQAKFGPDVQWVDSADDLVVDPRRGDAFYAEVRKYWPALPDGALIPGYAGIRPKIHGP-GESAPDFCIQ-------GPKDHGIAGLVNLFGIESPGLTSSLAVADHVAE 362
[Close]
BLAST of NO28G00160 vs. NCBI_GenBank
Match: WP_090047957.1 (NAD(P)/FAD-dependent oxidoreductase [Limnohabitans sp. 2KL-27])

HSP 1 Score: 365.9 bits (938), Expect = 1.900e-97
Identity = 203/398 (51.01%), Postives = 268/398 (67.34%), Query Frame = 0 
Query:   95 VDVLVCGAGVVGLAIARAFARAGREVLVVEAEKSFGTQTSARNSEVIHAGIYYPPGSLKASLCVRGRQMLYTFCEEHGVPFRRCGKLIVATSDKGDDGQRLEALYHQAHSNGVIDLQRLSSRDVARMEPHVHCMQALFSPSTGILDSHQFMLALLGDAEDHGASIAYRSRVQ---IKEVSPAGFVSLTTVEGEGKEPSTDLRPRLFINTTGLSALPLARQIGRRPAGLPP--FPPPSYAKGNYFRL-GPPPLPSXXXXXXXXXXXFNCLVYPLPETAGLGIHATIDLGGQVRFGPDVEWVSDPDDLSVNPSRAESFYASIRRYFPSLQDGQLVADYAGIRPKIQSPHDKTASDFILEGGPSSSGGGREGGMEGIINCVGIESPGLTASLAIAEWVKQR 487
            VD +V GAGVVGLA+ RA A +GREVLV+E+E + GT TS+RNSEVIHAGIYYP GSLKA LCV+G+QMLY +C E GV  +R GKLIVATS   +    LE +  +A +NGV DLQ+L++     +EP + C  AL SPSTG++DSH +MLAL GD E+ G  +A  S VQ   ++  +P   + +TT +G      T+L  ++ +N  GLSA+ LAR +    AGL P   P   YAKGNYF L G  P              F+ L+YP+PE AGLG+H T+DLGGQ +FGPDV+WV DP DL V+P R ++FYA +R+Y+P+LQDG L   YAG+RPKI +PH+ TA+DF+++       G  E G+ G++N +GIESPGLT+SLA+A+ V  R
Sbjct:    4 VDAVVIGAGVVGLAVGRALALSGREVLVLESENAIGTGTSSRNSEVIHAGIYYPAGSLKARLCVQGKQMLYAYCAERGVAHQRLGKLIVATSP--EQVLALEGIRAKAAANGVHDLQKLTAAQAQALEPALACEAALLSPSTGVIDSHGYMLALQGDMENAGGLLALVSPVQHIGLQHGTPTHPIRVTTKDG------TELACQVLVNAAGLSAVALARGM----AGLDPSLLPQAHYAKGNYFTLAGKAP--------------FSRLIYPVPEAAGLGVHLTLDLGGQAKFGPDVQWVDDPADLQVDPRRGDAFYAEVRKYWPALQDGALQPGYAGMRPKINAPHE-TAADFMVQ-------GPAEHGVPGLVNLLGIESPGLTSSLAMADEVCAR 367
[Close]
BLAST of NO28G00160 vs. NCBI_GenBank
Match: WP_108362792.1 (NAD(P)/FAD-dependent oxidoreductase [Limnohabitans sp. Bal53] >PUE41289.1 FAD-dependent oxidoreductase [Limnohabitans sp. Bal53])

HSP 1 Score: 365.5 bits (937), Expect = 2.500e-97
Identity = 200/398 (50.25%), Postives = 267/398 (67.09%), Query Frame = 0 
Query:   95 VDVLVCGAGVVGLAIARAFARAGREVLVVEAEKSFGTQTSARNSEVIHAGIYYPPGSLKASLCVRGRQMLYTFCEEHGVPFRRCGKLIVATSDKGDDGQRLEALYHQAHSNGVIDLQRLSSRDVARMEPHVHCMQALFSPSTGILDSHQFMLALLGDAEDHGASIAYRSRVQ---IKEVSPAGFVSLTTVEGEGKEPSTDLRPRLFINTTGLSALPLARQIGRRPAGLPPFPPPSYAKGNYFRL-GPPPLPSXXXXXXXXXXXFNCLVYPLPETAGLGIHATIDLGGQVRFGPDVEWVSDPDDLSVNPSRAESFYASIRRYFPSLQDGQLVADYAGIRPKIQSPHDKTASDFILEGGPSSSGGGREGGMEGIINCVGIESPGLTASLAIAEWVKQRAM 489
            VD +V GAGVVGLA+ RA A +GREVLV+E+E + GT TS+RNSEVIHAGIYYP GSLKA LCV+G+ MLY +C E GV  +R GKLIVATS   +    L+ +  +A +NGV DLQ+LS+ +   +EP + C  AL SPSTG++DSH FMLAL GD E+ G  +A  S VQ   +K  +    + +TT +G      T+L  ++ +N  GL+A+ +AR +    AGL   P   +AKGNYF L G  P              F+ L+YP+PE AGLG+H T+DLGGQ +FGPDV+WV DP DL V+P R ++FYA +R+Y+P+LQDG L A YAG+RPKI +PH+  A+DF+++       G  E G+ G++N +GIESPGLT+SLAIA+ V  R +
Sbjct:    4 VDAVVIGAGVVGLAVGRALALSGREVLVLESENAMGTGTSSRNSEVIHAGIYYPAGSLKARLCVQGKAMLYAYCAERGVAHQRLGKLIVATSP--EQVLALDGIRAKAAANGVHDLQKLSAAEAQALEPALACEAALLSPSTGVVDSHGFMLALQGDMENAGGLLALVSPVQHIGLKHGTATHPIRVTTQDG------TELACQVLVNAAGLNAVSVARAMAGLDAGL--LPQAHFAKGNYFTLAGKAP--------------FSRLIYPVPEAAGLGVHLTLDLGGQAKFGPDVQWVQDPSDLQVDPRRGDAFYAEVRKYWPALQDGALQAGYAGMRPKINAPHE-AAADFMIQ-------GPAEHGVPGLVNLLGIESPGLTSSLAIAQEVCDRLL 369
[Close]
BLAST of NO28G00160 vs. NCBI_GenBank
Match: WP_056664911.1 (NAD(P)/FAD-dependent oxidoreductase [Acidovorax sp. Leaf160] >KQR55790.1 FAD-dependent oxidoreductase [Acidovorax sp. Leaf160])

HSP 1 Score: 364.8 bits (935), Expect = 4.300e-97
Identity = 201/391 (51.41%), Postives = 252/391 (64.45%), Query Frame = 0 
Query:   96 DVLVCGAGVVGLAIARAFARAGREVLVVEAEKSFGTQTSARNSEVIHAGIYYPPGSLKASLCVRGRQMLYTFCEEHGVPFRRCGKLIVATSDKGDDGQRLEALYHQAHSNGVIDLQRLSSRDVARMEPHVHCMQALFSPSTGILDSHQFMLALLGDAEDHGASIAYRSRVQIKEVSPAGFVSLTTVEGEGKEPSTDLRPRLFINTTGLSALPLARQIGRRPAGLPP--FPPPSYAKGNYFRL-GPPPLPSXXXXXXXXXXXFNCLVYPLPETAGLGIHATIDLGGQVRFGPDVEWVSDPDDLSVNPSRAESFYASIRRYFPSLQDGQLVADYAGIRPKIQSPHDKTASDFILEGGPSSSGGGREGGMEGIINCVGIESPGLTASLAIAEWV 484
            DV+V GAGVVGLA+ARA A  GREVLV+EA  + GT TS+RNSEVIHAG+YYP GSLKA LCV+GRQ LY +CEE  V  RRCGKL+VATS+  D    L  +   A +NGV DLQ L       +EP +HC  AL SPSTGI+DSH FML+L GD E  G  +A  S V+   V+  G V  T       +  T+L   L +N+ GL+A  LAR+      GL P   P P YAKGNYF L G  P              F+ L+YP+PE AGLG+H T+D+GGQ +FGPDVEWV DP DL VNP+R +SFYA +R+Y+P+L+DG L   YAG+RPKI  P +  A+DF+++       G    G++G+IN  GIESPGLT++LA+   V
Sbjct:    5 DVVVMGAGVVGLAVARALALRGREVLVLEAAGAIGTGTSSRNSEVIHAGLYYPAGSLKAQLCVQGRQQLYAYCEERHVAHRRCGKLVVATSE--DQSGALRRVQQHAAANGVTDLQWLDGEQARALEPALHCSAALLSPSTGIIDSHAFMLSLQGDLEHAGGMVALHSPVRSMRVADGGIVVET-------QDGTELLAGLVVNSAGLAAPQLAREC----LGLDPRHVPTPRYAKGNYFMLSGAAP--------------FSRLIYPVPEAAGLGVHLTLDMGGQAKFGPDVEWVDDPTDLVVNPARGDSFYAEVRKYWPALRDGALTPGYAGMRPKIHGPAE-PAADFVVQ-------GPEVHGVKGLINLFGIESPGLTSALALGALV 360
[Close]
BLAST of NO28G00160 vs. NCBI_GenBank
Match: EJL86025.1 (putative dehydrogenase [Polaromonas sp. CF318])

HSP 1 Score: 364.4 bits (934), Expect = 5.600e-97
Identity = 200/393 (50.89%), Postives = 257/393 (65.39%), Query Frame = 0 
Query:   95 VDVLVCGAGVVGLAIARAFARAGREVLVVEAEKSFGTQTSARNSEVIHAGIYYPPGSLKASLCVRGRQMLYTFCEEHGVPFRRCGKLIVATSDKGDDGQRLEALYHQAHSNGVIDLQRLSSRDVARMEPHVHCMQALFSPSTGILDSHQFMLALLGDAEDHGASIAYRSRVQIKEVSPAGFVSLTTVEGEGKEPSTDLRPRLFINTTGLSALPLARQIGRRPAGLPP--FPPPSYAKGNYFRLGPPPLPSXXXXXXXXXXXFNCLVYPLPETAGLGIHATIDLGGQVRFGPDVEWVSDPDDLSVNPSRAESFYASIRRYFPSLQDGQLVADYAGIRPKIQSPHDKTASDFILEGGPSSSGGGREGGMEGIINCVGIESPGLTASLAIAEWVKQ 486
            VD +V GAGVVGLA+ARA A  GREV+V+EA  + GT TS+RNSEVIHAGIYYP GSLKA LCV G+++LY +C E G+  RRCGKLIVATS       +L+ +  +A +NGV DL  L+      MEP + C+ AL SPSTGI+DSH  MLAL GD E+ G  +A  S +   E S A  + L   +G      T+L     +N  GL     A+Q+ RR AGLP    PP  YAKGNYF L P   P            F+ L+YP+PE AGLG+H T+D+GGQ +FGPDV+WV  PDDL V+P+R E+FYA +R+Y+P+L DG L   YAGIRPKIQ+PH+  A DF+++       G R+ G+ G++N  GIESPGLT+SLAI ++V +
Sbjct:    4 VDCVVIGAGVVGLAVARALALRGREVMVLEAADAIGTGTSSRNSEVIHAGIYYPQGSLKARLCVEGKELLYAYCAERGISHRRCGKLIVATSQA--QVAQLQGIRDKAAANGVNDLALLTREQARAMEPKLECVAALHSPSTGIVDSHGLMLALQGDLENAGGLVALNSPLARAECS-ASAIYLAAQDG------TELEATSVVNAAGLQ----AQQLARRFAGLPAKHVPPSHYAKGNYFTL-PGRSP------------FSRLIYPVPEAAGLGVHLTVDMGGQAKFGPDVQWVDSPDDLVVDPARGEAFYAEVRKYWPALADGALAPGYAGIRPKIQAPHE-AAKDFLIQ-------GPRDHGVAGLVNLFGIESPGLTSSLAIGDYVSR 362
[Close]
BLAST of NO28G00160 vs. NCBI_GenBank
Match: WP_036838004.1 (NAD(P)/FAD-dependent oxidoreductase [Polaromonas sp. CF318])

HSP 1 Score: 364.4 bits (934), Expect = 5.600e-97
Identity = 200/393 (50.89%), Postives = 257/393 (65.39%), Query Frame = 0 
Query:   95 VDVLVCGAGVVGLAIARAFARAGREVLVVEAEKSFGTQTSARNSEVIHAGIYYPPGSLKASLCVRGRQMLYTFCEEHGVPFRRCGKLIVATSDKGDDGQRLEALYHQAHSNGVIDLQRLSSRDVARMEPHVHCMQALFSPSTGILDSHQFMLALLGDAEDHGASIAYRSRVQIKEVSPAGFVSLTTVEGEGKEPSTDLRPRLFINTTGLSALPLARQIGRRPAGLPP--FPPPSYAKGNYFRLGPPPLPSXXXXXXXXXXXFNCLVYPLPETAGLGIHATIDLGGQVRFGPDVEWVSDPDDLSVNPSRAESFYASIRRYFPSLQDGQLVADYAGIRPKIQSPHDKTASDFILEGGPSSSGGGREGGMEGIINCVGIESPGLTASLAIAEWVKQ 486
            VD +V GAGVVGLA+ARA A  GREV+V+EA  + GT TS+RNSEVIHAGIYYP GSLKA LCV G+++LY +C E G+  RRCGKLIVATS       +L+ +  +A +NGV DL  L+      MEP + C+ AL SPSTGI+DSH  MLAL GD E+ G  +A  S +   E S A  + L   +G      T+L     +N  GL     A+Q+ RR AGLP    PP  YAKGNYF L P   P            F+ L+YP+PE AGLG+H T+D+GGQ +FGPDV+WV  PDDL V+P+R E+FYA +R+Y+P+L DG L   YAGIRPKIQ+PH+  A DF+++       G R+ G+ G++N  GIESPGLT+SLAI ++V +
Sbjct:    5 VDCVVIGAGVVGLAVARALALRGREVMVLEAADAIGTGTSSRNSEVIHAGIYYPQGSLKARLCVEGKELLYAYCAERGISHRRCGKLIVATSQA--QVAQLQGIRDKAAANGVNDLALLTREQARAMEPKLECVAALHSPSTGIVDSHGLMLALQGDLENAGGLVALNSPLARAECS-ASAIYLAAQDG------TELEATSVVNAAGLQ----AQQLARRFAGLPAKHVPPSHYAKGNYFTL-PGRSP------------FSRLIYPVPEAAGLGVHLTVDMGGQAKFGPDVQWVDSPDDLVVDPARGEAFYAEVRKYWPALADGALAPGYAGIRPKIQAPHE-AAKDFLIQ-------GPRDHGVAGLVNLFGIESPGLTSSLAIGDYVSR 363
[Close]
BLAST of NO28G00160 vs. NCBI_GenBank
Match: WP_060984590.1 (NAD(P)/FAD-dependent oxidoreductase [Acidovorax delafieldii])

HSP 1 Score: 364.0 bits (933), Expect = 7.300e-97
Identity = 202/391 (51.66%), Postives = 257/391 (65.73%), Query Frame = 0 
Query:   95 VDVLVCGAGVVGLAIARAFARAGREVLVVEAEKSFGTQTSARNSEVIHAGIYYPPGSLKASLCVRGRQMLYTFCEEHGVPFRRCGKLIVATSDKGDDGQRLEALYHQAHSNGVIDLQRLSSRDVARMEPHVHCMQALFSPSTGILDSHQFMLALLGDAEDHGASIAYRSRVQIKEVSPAGFVSLTTVEGEGKEPSTDLRPRLFINTTGLSALPL-ARQIGRRPAGLPPFPPPSYAKGNYFRL-GPPPLPSXXXXXXXXXXXFNCLVYPLPETAGLGIHATIDLGGQVRFGPDVEWVSDPDDLSVNPSRAESFYASIRRYFPSLQDGQLVADYAGIRPKIQSPHDKTASDFILEGGPSSSGGGREGGMEGIINCVGIESPGLTASLAIAEWV 484
            VD +V GAGVVGLA+ARA A  GREV+V+EA  + GT TS+RNSEVIHAG+YYP GSLKA LCVRG+++LY +C E GVP RRCGKL+VATS    D   LE +  +A +NGV+DLQRLS  +   +EP + C+ AL SPSTGI+DSH  MLAL GD E  G  +A  S + +  +  +  + L  V+G      T LR R  +N  GL A  L AR +G     L   P   YAKGNYF L G  P              F+ L+YP+PE AGLG+H T+DLGGQ +FGPDV+WV  PDDL V+P+R ++FYA +R+Y+P LQDG L   YAG+RPKI  P D  A+DF+++ GP+        G+ G++N  GIESPGLT++LAIAE V
Sbjct:    5 VDCVVVGAGVVGLAVARALALQGREVMVLEAADAIGTGTSSRNSEVIHAGLYYPAGSLKARLCVRGKELLYAYCAERGVPHRRCGKLLVATSAAQLDS--LEGIQARARANGVLDLQRLSHEEALELEPALACVGALHSPSTGIVDSHALMLALQGDLEHAGGVVALNSPLALASIG-SDAIDLEAVDG------TRLRARTVVNAAGLHAPALAARFVG---LALQHVPMAFYAKGNYFTLTGKAP--------------FSRLIYPVPEAAGLGVHLTLDLGGQAKFGPDVQWVDSPDDLQVDPARGDAFYAEVRKYWPGLQDGALAPGYAGMRPKIHGP-DAPAADFVIQ-GPTVH------GVAGLVNLFGIESPGLTSALAIAEHV 361
[Close]
BLAST of NO28G00160 vs. NCBI_GenBank
Match: ODU11564.1 (FAD-dependent oxidoreductase [Variovorax sp. SCN 67-85] >ODV15071.1 FAD-dependent oxidoreductase [Variovorax sp. SCN 67-20] >OJZ12029.1 FAD-dependent oxidoreductase [Variovorax sp. 67-131])

HSP 1 Score: 364.0 bits (933), Expect = 7.300e-97
Identity = 203/396 (51.26%), Postives = 256/396 (64.65%), Query Frame = 0 
Query:   95 VDVLVCGAGVVGLAIARAFARAGREVLVVEAEKSFGTQTSARNSEVIHAGIYYPPGSLKASLCVRGRQMLYTFCEEHGVPFRRCGKLIVATSDKGDDGQRLEALYHQAHSNGVIDLQRLSSRDVARMEPHVHCMQALFSPSTGILDSHQFMLALLGDAEDHGASIAYRSRVQIKEVSPAGFVSLTTVEGEGKEPSTDLRPRLFINTTGLSALPLARQIGRRPAGLPPFPPPSYAKGNYFRL-GPPPLPSXXXXXXXXXXXFNCLVYPLPETAGLGIHATIDLGGQVRFGPDVEWVSDPDDLSVNPSRAESFYASIRRYFPSLQDGQLVADYAGIRPKIQSPHDKTASDFILEGGPSSSGGGREGGMEGIINCVGIESPGLTASLAIAEWVKQRAMG 490
            +D  V GAGVVGLA+ARA A AGREVLV+E+E + GT TS+RNSEVIHAGIYYP GSLKA LCV G+Q+LY + +E GVP RRCGKLIVATS   +   +LEA+  +A +NGV DL+ L+ +    +EP + C+ AL SPSTGI+DSH  ML+LLGD E+ G  +A +S V   E    G V +        +  T LR R  +N  GL A  LAR+    PA     P   +AKGNYF L G  P              F  LVYP+PE  GLG+H TIDLGGQ +FGPDV+WVS  DDL V+P+R + FYA +R+Y+P+L DG L+  YAG+RPKI  P  + A+DF++E GPSS       G+ G++N  GIESPGLT+SLAI   V +   G
Sbjct:    4 IDCAVIGAGVVGLAVARALALAGREVLVLESEGAIGTATSSRNSEVIHAGIYYPKGSLKARLCVEGKQLLYAYADERGVPHRRCGKLIVATSP--EQAGQLEAIRVKAAANGVDDLELLTEQQAKALEPQLQCVAALHSPSTGIVDSHALMLSLLGDLENAGGMLALKSPVTRAECGADGIVLIA-------QDGTALRCRTVVNAAGLGAPALARRFEGLPAS--SVPQEYFAKGNYFTLSGRAP--------------FGRLVYPVPEPGGLGVHLTIDLGGQAKFGPDVQWVSSADDLVVDPARGDGFYAEVRKYWPALPDGALIPGYAGMRPKISGP-GEPAADFVIE-GPSSH------GVAGLVNLFGIESPGLTSSLAIGAHVARLLAG 366
The following BLAST results are available for this feature:
BLAST of NO28G00160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_006298283.12.300e-9851.51NAD(P)/FAD-dependent oxidoreductase [Hylemonella g... [more]
WP_015013989.12.300e-9852.04NAD(P)/FAD-dependent oxidoreductase [Acidovorax sp... [more]
WP_044403040.11.900e-9751.52NAD(P)/FAD-dependent oxidoreductase [Acidovorax te... [more]
WP_090047957.11.900e-9751.01NAD(P)/FAD-dependent oxidoreductase [Limnohabitans... [more]
WP_108362792.12.500e-9750.25NAD(P)/FAD-dependent oxidoreductase [Limnohabitans... [more]
WP_056664911.14.300e-9751.41NAD(P)/FAD-dependent oxidoreductase [Acidovorax sp... [more]
EJL86025.15.600e-9750.89putative dehydrogenase [Polaromonas sp. CF318][more]
WP_036838004.15.600e-9750.89NAD(P)/FAD-dependent oxidoreductase [Polaromonas s... [more]
WP_060984590.17.300e-9751.66NAD(P)/FAD-dependent oxidoreductase [Acidovorax de... [more]
ODU11564.17.300e-9751.26FAD-dependent oxidoreductase [Variovorax sp. SCN 6... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR088ncniR088Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO28G00160.1NO28G00160.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|384713gene_11002Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO28G00160.1NO28G00160.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO28G00160 ID=NO28G00160|Name=NO28G00160|organism=Nannochloropsis oceanica|type=gene|length=4284bp
GGGGGGCAAGGCATGAAGGTCCAAGCCGGTGGATTTTCGTGTGCAGCCAC
CAACGGCCAGCAGTAACAACAACAACTGACACGTGGGACGCCATCCAGGC
GGCGACAAAGAGAGGCGAACGCACCTTTTATAGACTGTATGTCGCACGTA
CGTGATGAATGATGATTTGGAGGATAAGTCCCGGGAATGACTGTGTGCGT
GTGCATCTATTCCGAGTCGCTGGTGCTTTGTTCCATCAAGGCGAGTTGCA
GCAGCAGCAGCAGTAGCAGCTGTAACAGCAGCAAGTTCCTTCTTCGTCAG
TCTCAATCTCTCTGCAATCTTCACACTCAACGACAGCCAGAAAAGGGAAG
GCGGGGAGGAGGTGTTAGACGAAAAATGCTCCCCAAAATAGCTCCTCGAG
CCCTCATCAATTGCAGCAGTCACAATCGTCGTCGGCGCTGGCTGTCCACC
CTCCCTTCCTCATTTAATGTGGACGTGTTGGTCTGCGGGGCAGGCGTTGT
GGGTTTGGCTATTGCCAGGGCGTTTGCTAGgtaaggaaagatggcatttg
tcggggggcgaaaggtcggaaaagaattgagggaaaagagggtgcatgaa
gggaaggggggggaggtcgagcagggaggaaggggtacacatgagagcgt
cagtgcactgtgaacgtttacgtgtcacacaagtcaggacatatgaagag
aggtagaatgttggaggagaggagttggggaagcagagaatgacccttaa
cctttgcacgtaaatttctatgtacactacgcagGGCAGGGCGGGAAGTG
CTAGTGGTGGAGGCCGAGAAAAGCTTTGGCACCCAAACGTCGGCACGCAA
CAGCGAGgtaggagggagggagggagggagggagggaggggatgaagaag
gtagggtagaaccgaagtgtcaccgtccctccctctctccctccctccct
ccctctgaagGTCATTCACGCAGGCATCTACTACCCTCCTGGCTCTCTTA
AAGCCTCTCTGTGTGTGCGAGGTCGGCAGATGCTCTATACTTTTTGCGAG
GAACACGGCGTGCCCTTTCGGAGgtagggagggagggagggagggaggga
gggagggcgaggaaaggtttgagtcagtagggtgcacacatcttcgtacc
tttatctgtagATGCGGCAAGCTCATCGTGGCCACCAGTGACAAGGGAGA
CGACGGCCAACGATTAGAGgtacgtttccatcctccctctctcctttcct
tcctcccttcctccttccctccctccctcagcccctcccttcctccctcc
cttgctatctcccgcgctcacttccctccctccctccctccctccctccc
ttcctccttgtctaccgtcctcagGCCCTGTACCACCAAGCTCACTCTAA
CGGCGTCATCGACCTTCAACGGCTTTCTTCCCGTGACGTCGCTCGCATGG
AGCCTCACGTCCACTGCATGCAGgtactcccctccctccctccctccctc
cctccctctttcctcccctctctccctccctccctcttcatggccgtgat
gccggcctcgtcaagcttgtcagaatgactttcatatctcccctcatttc
ctccctgttaaattaagtcatgatcgtgccttcttctttcccccccgcct
ccttctcactttctcgccctccctccctccctccctccctccctccctcc
ctccctccctccctcccccagGCCCTCTTCTCCCCATCGACCGGTATCTT
AGACAGTCACCAATTTATGCTTGCACTCCTGGGAGATGCTGAGgtaggga
gggagggagggagggagggagggagagaagggagtgggaaaaataataat
gaattaaaagttacttccctccctccttccctccctccctctctctctct
ctctctccctctctctctctccccctctctctctctctctccctctctct
ctctctctctccctccctctctctctctctctccctctctccctctctcc
ctccctccctcagGATCATGGTGCCTCTATCGCTTACCGTAGCCGTGTGC
AGATTAAGGAGGTCTCACCCGCCGGATTCGTGAGCCTCACGACGGTCGAG
GGAGAGGGGAAGGAGgtgggggaaagagggagagagagtgagagggaggg
agggagggagagagggagggaaggaagcaacattttaattcatcgtgatt
ggttagggaaggatggagggagggggagagaaagggatggaggggagggc
ccagggccgagtcaatattcgtttaaaacggaaaggaaatcggtcctttt
tttgctgatccccctctccccctcgttctccctccttccagCCCTCCACG
GACCTTCGCCCGCGCCTCTTCATCAACACCACGGGCCTCTCCGCCCTCCC
TCTCGCCCGTCAAATCGGACGCCGACCAGCGgtaagcaagccctccctcc
ttccctctctgtctccctccctccctccctccttattctccgctcccttc
tcctttcccggtgctcaattactcttcccttcttttccccctccttttct
ccgctcacagGGCCTTCCTCCCTTCCCCCCACCCTCCTATGCCAAAGGCA
ACTACTTCCGCCTCGGTCCCCCCCCCCTCCCTTCCTCCCCTCCCACCCTC
CCTCCCTCCCTCCCTCCATTTAACTGCCTCGTCTATCCGTTACCGGAAAC
GGCTGGGCTAGGCATTCATGCCACCATCGACCTCGGGGGGCAAGTCCGTT
TCGGTCCTGACGTGGAGTGGGTGTCAGACCCAGgcacgtacctcctccct
ccctccctccctccctccctccctccctccctcctatgatattgcttcgt
attgcaatgggtagggagggagggaggaaggggaggagggagggaggaag
ggagaagaaagcgaagaaagagaagatctagattgagtcggtggaaaatc
actatggtggcaacttggattctgatcacccccccttcctccctccctcc
ctccctccgtacagACGACCTCTCCGTAAACCCTTCTCGCGCCGAGgtga
gtgctggattgtactttctggtctcatctgaacctccccttccctccttc
ccttcctcctcctatccttcctcccctccctccctccctccctccctcct
atccctccgccctcctcaatattaactttgtccgggtctcttacccttcc
cttactccctccttccctcccttcccagTCCTTCTACGCCTCCATCCGGC
GTTACTTTCCTTCCTTGCAAGACGGACAACTCGTCGCCGACTACGCAGGA
ATCAGACCCAAGATCCAGgcgagggagggagggagggagggagagaggga
gggaagggaggggtggttcagaaaacggaaaaggaaagagggctgggaat
gaagaggaagggagggagggaagagagggagggaagggagggagggaagg
gagggagggaagggagagagaaatgtgcaaatgtttgaggtttttcactc
tcctttctatttcgcgggtgtgctctgtgccgtgcttcttaccttctccc
cttcccttcctccctccctccctccctccctccctcctcggtcttctcag
AGTCCCCACGATAAGACAGCCAGCGATTTTATTTTGGAGGGCGGTCCCTC
TTCTTCCGGAGGAGGGAGAGAGGGAGGGATGGAGGGTATCATCAATTGTG
TGGGAATTGAGAGTCCTGGCTTGACGGCGTCGCTGGCTATTGCGGAGTGG
GTGAAACAAAGAGCGATGGGGTGAGGAGGAGTAGAAGGCGGGTGGGGGGT
ATAATCTTGTTCTGACTCTAATACATTGATCATATTTATTAAGTAGAAAA
GTGCATAGATGCAAGCCATCAAGTGGATTATCAAAGCCTGTGAATACAAG
AGAGATTGAAACGAAATATGTCAGATGGTTTGGGGCCCTTCTCCCCTTCT
CTGTTAAATTTAGGGTAGGTCTGCGTGCACGCGTGTCGCTCTCTATGCTT
TCTCTAGTACGAATGCTTTCTTGTGTACGAGGGCATTTGGATGTGCTGCT
TTGACACAACACAGCCTCCCTTTTTCGGATTTCTAGCCCCCTTTATTTCA
TTCAAAGATGCCATTTGTTGCCCCCTAGAAAGCATCTAAAAAATTCAAGT
ATCTCTCGAAAGAGTGCATGTGTTTTGTCCGTGGCTGGAAGTGATATGTG
GGTGTATGCTTGGGAGCACTGGAGGCAAAGAAGCAACGCAATAGTTGAAG
TTGCTGGAGCGACACTGGATAAGGAGGAAAGGAG
back to top

protein sequence of NO28G00160.1

>NO28G00160.1-protein ID=NO28G00160.1-protein|Name=NO28G00160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=490bp
MTVCVCIYSESLVLCSIKASCSSSSSSSCNSSKFLLRQSQSLCNLHTQRQ
PEKGRRGGGVRRKMLPKIAPRALINCSSHNRRRRWLSTLPSSFNVDVLVC
GAGVVGLAIARAFARAGREVLVVEAEKSFGTQTSARNSEVIHAGIYYPPG
SLKASLCVRGRQMLYTFCEEHGVPFRRCGKLIVATSDKGDDGQRLEALYH
QAHSNGVIDLQRLSSRDVARMEPHVHCMQALFSPSTGILDSHQFMLALLG
DAEDHGASIAYRSRVQIKEVSPAGFVSLTTVEGEGKEPSTDLRPRLFINT
TGLSALPLARQIGRRPAGLPPFPPPSYAKGNYFRLGPPPLPSSPPTLPPS
LPPFNCLVYPLPETAGLGIHATIDLGGQVRFGPDVEWVSDPDDLSVNPSR
AESFYASIRRYFPSLQDGQLVADYAGIRPKIQSPHDKTASDFILEGGPSS
SGGGREGGMEGIINCVGIESPGLTASLAIAEWVKQRAMG*
back to top
Synonyms
Publications