NO28G00130, NO28G00130 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G00130 vs. NCBI_GenBank
Match: OQR82913.1 (small ubiquitin-like modifier (SUMO) [Achlya hypogyna]) HSP 1 Score: 112.5 bits (280), Expect = 7.500e-22 Identity = 56/95 (58.95%), Postives = 68/95 (71.58%), Query Frame = 0
Query: 1 MSTEEKVKAEGGSGSTEHIVLRVRDQTGEEIQFKVKPTTKMEKILNAYADRKGVSVAALRFMVDGERINPTDTPSTLELENDDQVDVMLEQLGGC 96
MS +E A G + I +RV+DQ+GEE FKVKP TKMEKI +AYA RKGV V+ALRF++DG RI P TP LELE+ DQ+D LEQ+GGC
Sbjct: 1 MSDQEDKVAADGEDKKQTITIRVKDQSGEETFFKVKPHTKMEKIFSAYAQRKGVPVSALRFLLDGTRIAPDQTPKMLELEDQDQIDCALEQVGGC 95
BLAST of NO28G00130 vs. NCBI_GenBank
Match: EWM29451.1 (small ubiquitin-like modifier [Nannochloropsis gaditana]) HSP 1 Score: 109.4 bits (272), Expect = 6.300e-21 Identity = 52/80 (65.00%), Postives = 65/80 (81.25%), Query Frame = 0
Query: 16 TEHIVLRVRDQTGEEIQFKVKPTTKMEKILNAYADRKGVSVAALRFMVDGERINPTDTPSTLELENDDQVDVMLEQLGGC 96
+E I LRV+DQTGEE FKVK TTKMEK+ +YA RKGV+V +LRF++DG+RI T + LELE++DQ+DVMLEQLGGC
Sbjct: 36 SESITLRVKDQTGEETMFKVKKTTKMEKVFASYAGRKGVNVDSLRFLLDGQRIEKHQTSAELELEDEDQIDVMLEQLGGC 115
BLAST of NO28G00130 vs. NCBI_GenBank
Match: XP_008618041.1 (hypothetical protein SDRG_13722 [Saprolegnia diclina VS20] >XP_012205237.1 hypothetical protein SPRG_10888 [Saprolegnia parasitica CBS 223.65] >EQC28393.1 hypothetical protein SDRG_13722 [Saprolegnia diclina VS20] >KDO24101.1 hypothetical protein SPRG_10888 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 107.1 bits (266), Expect = 3.100e-20 Identity = 56/96 (58.33%), Postives = 66/96 (68.75%), Query Frame = 0
Query: 1 MSTEEKVKA-EGGSGSTEHIVLRVRDQTGEEIQFKVKPTTKMEKILNAYADRKGVSVAALRFMVDGERINPTDTPSTLELENDDQVDVMLEQLGGC 96
MS E KA G + I +RV+DQ+GEE FKVKP TKMEKI +AYA RKGV V ALRF++DG RI TP LELE+ DQ+D LEQ+GGC
Sbjct: 1 MSDHEDTKAGADGEDKKQTITIRVKDQSGEETFFKVKPHTKMEKIFSAYAQRKGVPVTALRFLLDGTRIAADQTPKMLELEDQDQIDCALEQVGGC 96
BLAST of NO28G00130 vs. NCBI_GenBank
Match: XP_024584581.1 (Ubiquitin-like proteins [Plasmopara halstedii] >CEG48212.1 Ubiquitin-like proteins [Plasmopara halstedii]) HSP 1 Score: 105.1 bits (261), Expect = 1.200e-19 Identity = 51/79 (64.56%), Postives = 62/79 (78.48%), Query Frame = 0
Query: 16 TEHIVLRVRDQTGEEIQFKVKPTTKMEKILNAYADRKGVSVAALRFMVDGERINPTDTPSTLELENDDQVDVMLEQLGG 95
TE I +RV+DQ+GEE FKVKP TKMEKI +AYA RKGV V+ALRF++DG RI+ TP LELE+ DQ+D LEQ+GG
Sbjct: 30 TEAITIRVKDQSGEETFFKVKPNTKMEKIFSAYAQRKGVPVSALRFLLDGTRISGDQTPKMLELEDQDQIDCALEQVGG 108
BLAST of NO28G00130 vs. NCBI_GenBank
Match: OEU22446.1 (small ubiquitin-like protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 105.1 bits (261), Expect = 1.200e-19 Identity = 52/89 (58.43%), Postives = 66/89 (74.16%), Query Frame = 0
Query: 10 EGGSGS----TEHIVLRVRDQTGEEIQFKVKPTTKMEKILNAYADRKGVSVAALRFMVDGERINPTDTPSTLELENDDQVDVMLEQLGG 95
EGG+G+ E I +RVRDQTGEE FK+K +TKM K+ N YA RKGV +++LRF++DGERI T TP LEL++ DQ+D MLEQ GG
Sbjct: 5 EGGAGAPEAKNEPITIRVRDQTGEETFFKIKKSTKMSKVFNTYAQRKGVQMSSLRFLLDGERIAETMTPQDLELDDQDQIDCMLEQSGG 93
BLAST of NO28G00130 vs. NCBI_GenBank
Match: OQS03315.1 (small ubiquitin-like modifier (SUMO) [Thraustotheca clavata]) HSP 1 Score: 104.8 bits (260), Expect = 1.600e-19 Identity = 53/91 (58.24%), Postives = 64/91 (70.33%), Query Frame = 0
Query: 4 EEKVKAEGGSGSTEHIVLRVRDQTGEEIQFKVKPTTKMEKILNAYADRKGVSVAALRFMVDGERINPTDTPSTLELENDDQVDVMLEQLGG 95
E+KV G + I +RV+DQ+GEE FKVKP TKMEKI +AYA RKGV V ALRF++DG RI TP LELE+ DQ+D LEQ+GG
Sbjct: 5 EDKVATGEGEEKKQTITIRVKDQSGEETFFKVKPHTKMEKIFSAYAQRKGVPVTALRFLLDGTRIAADQTPKMLELEDQDQIDCALEQVGG 95
BLAST of NO28G00130 vs. NCBI_GenBank
Match: XP_002180525.1 (small ubiquitin-like modifier [Phaeodactylum tricornutum CCAP 1055/1] >EEC47933.1 small ubiquitin-like modifier [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 104.4 bits (259), Expect = 2.000e-19 Identity = 53/93 (56.99%), Postives = 65/93 (69.89%), Query Frame = 0
Query: 2 STEEKVKAEGGSGSTEHIVLRVRDQTGEEIQFKVKPTTKMEKILNAYADRKGVSVAALRFMVDGERINPTDTPSTLELENDDQVDVMLEQLGG 95
+T E VK S E I +RVRDQTGEE FK+K TTKM+K+ YA RKGV V +LRF++DG+RI P TP LELE+ DQ+D +LEQ GG
Sbjct: 5 ATTEDVKE-----SAESITVRVRDQTGEETFFKIKKTTKMQKVFETYATRKGVQVNSLRFLLDGDRITPDQTPKMLELEDQDQIDCVLEQTGG 92
BLAST of NO28G00130 vs. NCBI_GenBank
Match: EJK47429.1 (hypothetical protein THAOC_33854 [Thalassiosira oceanica]) HSP 1 Score: 104.0 bits (258), Expect = 2.700e-19 Identity = 53/94 (56.38%), Postives = 66/94 (70.21%), Query Frame = 0
Query: 1 MSTEEKVKAEGGSGSTEHIVLRVRDQTGEEIQFKVKPTTKMEKILNAYADRKGVSVAALRFMVDGERINPTDTPSTLELENDDQVDVMLEQLGG 95
MS E K EG E I +RV+DQTGEE FKVK TTKM+KI AYA RKGV ++LRF++DG+RI TP LELE++DQ+D +L Q+GG
Sbjct: 1 MSDAEDAKPEG----NEPITIRVKDQTGEETMFKVKKTTKMQKIFGAYAQRKGVDPSSLRFLLDGDRIQGDQTPKMLELEDEDQIDCVLAQMGG 90
BLAST of NO28G00130 vs. NCBI_GenBank
Match: GAX28316.1 (small ubiquitin-related modifier [Fistulifera solaris] >GAX13529.1 small ubiquitin-related modifier [Fistulifera solaris]) HSP 1 Score: 103.6 bits (257), Expect = 3.500e-19 Identity = 45/76 (59.21%), Postives = 59/76 (77.63%), Query Frame = 0
Query: 19 IVLRVRDQTGEEIQFKVKPTTKMEKILNAYADRKGVSVAALRFMVDGERINPTDTPSTLELENDDQVDVMLEQLGG 95
+ +R+RDQ GEE FK+K TTKM+K+ YA RKG+ +A+LRF++DGER+ PT TP LELE+ DQ+D MLEQ GG
Sbjct: 12 LTIRIRDQQGEETFFKIKKTTKMQKVFETYATRKGLQIASLRFLLDGERVEPTSTPKMLELEDQDQIDCMLEQAGG 87
BLAST of NO28G00130 vs. NCBI_GenBank
Match: GAY02773.1 (Hypothetical protein PINS_010607 [Pythium insidiosum]) HSP 1 Score: 103.6 bits (257), Expect = 3.500e-19 Identity = 50/79 (63.29%), Postives = 62/79 (78.48%), Query Frame = 0
Query: 16 TEHIVLRVRDQTGEEIQFKVKPTTKMEKILNAYADRKGVSVAALRFMVDGERINPTDTPSTLELENDDQVDVMLEQLGG 95
+E I +RV+DQ+GEE FKVKP TKMEKI +AYA RKGV V+ALRF++DG RI+ TP LELE+ DQ+D LEQ+GG
Sbjct: 18 SEAITIRVKDQSGEETFFKVKPNTKMEKIFSAYAQRKGVPVSALRFLLDGTRISGDQTPKMLELEDQDQIDCALEQVGG 96 The following BLAST results are available for this feature:
BLAST of NO28G00130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G00130 ID=NO28G00130|Name=NO28G00130|organism=Nannochloropsis oceanica|type=gene|length=969bpback to top protein sequence of NO28G00130.1 >NO28G00130.1-protein ID=NO28G00130.1-protein|Name=NO28G00130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=96bpback to top Synonyms
Publications
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