NO27G01680, NO27G01680 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO27G01680 vs. NCBI_GenBank
Match: XP_009036340.1 (hypothetical protein AURANDRAFT_24962 [Aureococcus anophagefferens] >EGB09233.1 hypothetical protein AURANDRAFT_24962 [Aureococcus anophagefferens]) HSP 1 Score: 114.8 bits (286), Expect = 2.800e-22 Identity = 61/137 (44.53%), Postives = 82/137 (59.85%), Query Frame = 0
Query: 38 PEGFWENAQAFAAAIDWGERWIQGLVAFHVLLWFLVIGFRKNMNVQASIFFFVCGLVAASEPLNTRLREKWWTHFSTQNYFDERGVFAVCMLTGPLIVLTCLQLCIFLHAAATMLVQVKRAELRSKHSKNLRVKKQQ 175
PE F EN AF AA+DW ERWIQG++A+H LW + + FRK VQ +FF V V +E LN L W F+TQNYFD+ G+FA + P++ L+ L FLH AA MLV VKR E + + + K+++
Sbjct: 23 PETFLENVAAFRAAVDWSERWIQGVLAWHASLWVVFLAFRKVYEVQVGLFFGVTIAVGLAERLNA-LGAAHWEKFATQNYFDDHGIFAGALFCAPMLALSLCMLLNFLHLAAHMLVDVKRREFKDHLTAKEKEKEKE 158
BLAST of NO27G01680 vs. NCBI_GenBank
Match: CBN75919.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 107.5 bits (267), Expect = 4.400e-20 Identity = 56/124 (45.16%), Postives = 75/124 (60.48%), Query Frame = 0
Query: 38 PEGFWENAQAFAAAIDWGERWIQGLVAFHVLLWFLVIGFRKNMNVQASIFFFVCGLVAASEPLNTRLREKWWTHFSTQNYFDERGVFAVCMLTGPLIVLTCLQLCIFLHAAATMLVQVKRAELR 162
PEGF EN QAF +A+DW E WIQG++ FH+LLW I R++ Q +F V SE +NT LR++ W +FS QNYFDE G+F M GPL++L L L A++LV VK + +
Sbjct: 54 PEGFVENFQAFRSAVDWSEPWIQGILVFHLLLWVFFIVTRRSFGAQVGLFAVVLTGTRLSEFINTCLRDR-WQNFSRQNYFDEHGIFMGVMWAGPLLILGFTMLVSLLCQTASLLVTVKTKQFK 176
BLAST of NO27G01680 vs. NCBI_GenBank
Match: PSC68436.1 (Transmembrane 18 isoform B [Micractinium conductrix]) HSP 1 Score: 101.3 bits (251), Expect = 3.100e-18 Identity = 62/162 (38.27%), Postives = 90/162 (55.56%), Query Frame = 0
Query: 3 ELDESQAGPASAVSEEM-QNWAAEQVFKLAREQGAQPEGFWENAQAFAAAIDWGERWIQGLVAFHVLLWFLVIGFRKNMNVQASIFFFVCGLVAASEPLNTRLREKWWTHFSTQNYFDERGVFAVCMLTGPLIVLTCLQLCIFLHAAATMLVQVKRAELRSK 164
E+ E AG V +++ Q W RE P E + F AA+DW ERWIQGL+AFH LL V+ FR+ V A++FF + +V +E +N L W FS+QNYFD +G+F +L+ PL+ + L L +L A + +L+++KR EL K
Sbjct: 10 EVREQLAGAMDVVLDDLRQKW---------RELSGGP-SVTEGLKRFVAAVDWSERWIQGLLAFHCLLLIFVVAFRRLPGVHAAVFFGIMPVVYFAERINA-LAATHWRSFSSQNYFDSQGIFTSALLSAPLLFIMLLILFHYLFATSALLIRMKRKELEYK 160
BLAST of NO27G01680 vs. NCBI_GenBank
Match: PSC68460.1 (Transmembrane 18 isoform A [Micractinium conductrix]) HSP 1 Score: 101.3 bits (251), Expect = 3.100e-18 Identity = 62/162 (38.27%), Postives = 90/162 (55.56%), Query Frame = 0
Query: 3 ELDESQAGPASAVSEEM-QNWAAEQVFKLAREQGAQPEGFWENAQAFAAAIDWGERWIQGLVAFHVLLWFLVIGFRKNMNVQASIFFFVCGLVAASEPLNTRLREKWWTHFSTQNYFDERGVFAVCMLTGPLIVLTCLQLCIFLHAAATMLVQVKRAELRSK 164
E+ E AG V +++ Q W RE P E + F AA+DW ERWIQGL+AFH LL V+ FR+ V A++FF + +V +E +N L W FS+QNYFD +G+F +L+ PL+ + L L +L A + +L+++KR EL K
Sbjct: 10 EVREQLAGAMDVVLDDLRQKW---------RELSGGP-SVTEGLKRFVAAVDWSERWIQGLLAFHCLLLIFVVAFRRLPGVHAAVFFGIMPVVYFAERINA-LAATHWRSFSSQNYFDSQGIFTSALLSAPLLFIMLLILFHYLFATSALLIRMKRKELEYK 160
BLAST of NO27G01680 vs. NCBI_GenBank
Match: PSC68459.1 (Transmembrane 18 isoform B [Micractinium conductrix]) HSP 1 Score: 101.3 bits (251), Expect = 3.100e-18 Identity = 62/162 (38.27%), Postives = 90/162 (55.56%), Query Frame = 0
Query: 3 ELDESQAGPASAVSEEM-QNWAAEQVFKLAREQGAQPEGFWENAQAFAAAIDWGERWIQGLVAFHVLLWFLVIGFRKNMNVQASIFFFVCGLVAASEPLNTRLREKWWTHFSTQNYFDERGVFAVCMLTGPLIVLTCLQLCIFLHAAATMLVQVKRAELRSK 164
E+ E AG V +++ Q W RE P E + F AA+DW ERWIQGL+AFH LL V+ FR+ V A++FF + +V +E +N L W FS+QNYFD +G+F +L+ PL+ + L L +L A + +L+++KR EL K
Sbjct: 10 EVREQLAGAMDVVLDDLRQKW---------RELSGGP-SVTEGLKRFVAAVDWSERWIQGLLAFHCLLLIFVVAFRRLPGVHAAVFFGIMPVVYFAERINA-LAATHWRSFSSQNYFDSQGIFTSALLSAPLLFIMLLILFHYLFATSALLIRMKRKELEYK 160
BLAST of NO27G01680 vs. NCBI_GenBank
Match: PSC68437.1 (Transmembrane 18 isoform A [Micractinium conductrix]) HSP 1 Score: 101.3 bits (251), Expect = 3.100e-18 Identity = 62/162 (38.27%), Postives = 90/162 (55.56%), Query Frame = 0
Query: 3 ELDESQAGPASAVSEEM-QNWAAEQVFKLAREQGAQPEGFWENAQAFAAAIDWGERWIQGLVAFHVLLWFLVIGFRKNMNVQASIFFFVCGLVAASEPLNTRLREKWWTHFSTQNYFDERGVFAVCMLTGPLIVLTCLQLCIFLHAAATMLVQVKRAELRSK 164
E+ E AG V +++ Q W RE P E + F AA+DW ERWIQGL+AFH LL V+ FR+ V A++FF + +V +E +N L W FS+QNYFD +G+F +L+ PL+ + L L +L A + +L+++KR EL K
Sbjct: 10 EVREQLAGAMDVVLDDLRQKW---------RELSGGP-SVTEGLKRFVAAVDWSERWIQGLLAFHCLLLIFVVAFRRLPGVHAAVFFGIMPVVYFAERINA-LAATHWRSFSSQNYFDSQGIFTSALLSAPLLFIMLLILFHYLFATSALLIRMKRKELEYK 160
BLAST of NO27G01680 vs. NCBI_GenBank
Match: KOO34144.1 (transmembrane protein 18-like protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 99.4 bits (246), Expect = 1.200e-17 Identity = 52/136 (38.24%), Postives = 81/136 (59.56%), Query Frame = 0
Query: 39 EGFWENAQAFAAAIDWGERWIQGLVAFHVLLWFLVIGFRKNMNVQASIFFFVCGLVAASEPLNTRLREKWWTHFSTQNYFDERGVFAVCMLTGPLIVLTCLQLCIFLHAAATMLVQVKRAELRSKHSKNLRVKKQQ 175
+ F + F A+DW E W++GL FH+L+W + I FR+ NVQ + + G+V ++E LN RL + W F+ QNYFD++GVF + + PL+ T L L +A+++L++VKR ELR+ KKQ+
Sbjct: 28 QSFMTDMLGFYHAVDWSEPWLRGLAVFHILVWTIAIAFRRWDNVQMLLLVSILGVVYSAETLN-RLGGEHWQQFAGQNYFDKQGVFISVLFSAPLLACTLFMLLNALRSASSLLIKVKRKELRAVARTRREEKKQE 162
BLAST of NO27G01680 vs. NCBI_GenBank
Match: PNH06883.1 (Transmembrane protein 18 [Tetrabaena socialis]) HSP 1 Score: 97.4 bits (241), Expect = 4.500e-17 Identity = 59/153 (38.56%), Postives = 84/153 (54.90%), Query Frame = 0
Query: 25 EQVFKLAREQG---AQPEGFWENAQAFAAAIDWGERWIQGLVAFHVLLWFLVIGFRKNMNVQASIFFFVCGLVAASEPLNTRLREKWWTHFSTQNYFDERGVFAVCMLTGPLIVLTCLQLCIFLHAAATMLVQVKRAELRSKHSKNLRVKKQQ 175
+ VFK R Q + E F Q F AIDW E WI G++AFHV ++ + RK +Q +F G+V SE LN RL W FSTQNYFD GVF +++ PLI++ + L +L + A+MLV+ K+ EL+ + + + K Q
Sbjct: 9 QDVFKDLRRQWQSFQEAEPFLHVVQGFIHAIDWREPWIIGILAFHVAMFLAAVATRKRTAIQTVVFMLAAGIVFMSERLN-RLAGLQWERFSTQNYFDATGVFMSAVVSAPLIIVMFIVLINYLLSCASMLVEAKKRELKHRARQRAKDAKAQ 160
BLAST of NO27G01680 vs. NCBI_GenBank
Match: XP_010461263.1 (PREDICTED: transmembrane protein 18 [Camelina sativa]) HSP 1 Score: 95.5 bits (236), Expect = 1.700e-16 Identity = 58/147 (39.46%), Postives = 84/147 (57.14%), Query Frame = 0
Query: 17 EEMQNWAAEQVFKLAREQGAQPEGFWENAQAFAAAIDWGERWIQGLVAFHVLLWFLVIGFRKNMNVQASIFFFVCGLVAASEPLNTRLREKWWTHFSTQNYFDERGVFAVCMLTGPLIVLTCLQLCIFLHAAATMLVQVKRAELRSK 164
E+ + A+ V KL+ E + ++N F AIDW E WI GL+AFH LL + + R+++N +F G V +E LN LR K W FSTQNYFD+ GVF + +GPL+V+ + L L + ++V+ KRAELR +
Sbjct: 9 EQQMDLMADLVQKLSGELRTGLQPAYDNFLGFFHAIDWKEPWIMGLMAFHALLLLVTLLSRRHLNFHMFLFLLALGGVYFAENLNRELR-KNWKSFSTQNYFDQHGVFVSVLWSGPLLVIAMIILINTLFSLCYLIVKWKRAELRHR 154
BLAST of NO27G01680 vs. NCBI_GenBank
Match: XP_010478866.1 (PREDICTED: transmembrane protein 18-like [Camelina sativa] >XP_010478867.1 PREDICTED: transmembrane protein 18-like [Camelina sativa]) HSP 1 Score: 95.1 bits (235), Expect = 2.300e-16 Identity = 58/147 (39.46%), Postives = 84/147 (57.14%), Query Frame = 0
Query: 17 EEMQNWAAEQVFKLAREQGAQPEGFWENAQAFAAAIDWGERWIQGLVAFHVLLWFLVIGFRKNMNVQASIFFFVCGLVAASEPLNTRLREKWWTHFSTQNYFDERGVFAVCMLTGPLIVLTCLQLCIFLHAAATMLVQVKRAELRSK 164
E+ + A+ V KL+ E + ++N F AIDW E WI GL+AFH LL + + R+++N +F G V +E LN LR K W FSTQNYFD+ GVF + +GPL+V+ + L L + ++V+ KRAELR +
Sbjct: 9 EQQMDLMADLVQKLSGELRTGIQPAYDNFLGFFHAIDWKEPWIMGLMAFHALLLLVTLLSRRHLNFHMFLFLLAWGGVYFAENLNRELR-KNWKSFSTQNYFDQHGVFVSVLWSGPLLVIAMIILINTLFSLCYLIVKWKRAELRHR 154 The following BLAST results are available for this feature:
BLAST of NO27G01680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO27G01680 ID=NO27G01680|Name=NO27G01680|organism=Nannochloropsis oceanica|type=gene|length=1280bpback to top protein sequence of NO27G01680.1 >NO27G01680.1-protein ID=NO27G01680.1-protein|Name=NO27G01680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=175bpback to top Synonyms
Publications
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