NO27G01670, NO27G01670 (gene) Nannochloropsis oceanica

Overview
NameNO27G01670
Unique NameNO27G01670
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2620
Alignment locationchr27:554295..556914 -

Link to JBrowse

Properties
Property NameValue
DescriptionVesicle transport protein SEC22
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr27genomechr27:554295..556914 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR011012Longin-like_dom
IPR001388Synaptobrevin
IPR010908Longin_dom
Homology
BLAST of NO27G01670 vs. NCBI_GenBank
Match: OQR82296.1 (vesicle-trafficking protein SEC22b [Achlya hypogyna])

HSP 1 Score: 263.5 bits (672), Expect = 6.200e-67
Identity = 127/223 (56.95%), Postives = 164/223 (73.54%), Query Frame = 0
Query:    1 MIFLTMAARVQDGLLLVASTDAAHEMSEQMDVYKSQAKQLLRKLNARSPAKQIIESGPCSFFYLLDQNICYLTLADKGYPRKLLFSYLEEIKDGFIQELSRDFGPEWKRQVETAARPYAFIKFDKFIQSKRRDYLDPTSRRNTSKLTEDLADISSIMKKNIQEVLNRGERLDNISQTSSKLVNDSKKYKWGAKKLSMMALYQQYAPFLVLGGIALVVIYLKFF 224
            M  LT  ARV DG++LVAS ++A + ++ +D YK Q KQ+++KLN RSP K  IESGP  F YL++   CYLT +DK YP++L F YLEEI  GF+ EL RD G  W+  V T ARPYAFIKFDKFIQ KR++Y DP+S +N SKL  DLADI ++M+KNIQEVLNRGE +D +SQ SS L + SK +KWGAKKLS+ A+YQ+Y P + +G   ++V+Y KFF
Sbjct:    1 MPILTFIARVSDGMILVASMESAGDYNDNLDTYKQQGKQIMKKLNQRSPTKCSIESGPYCFHYLIEDGNCYLTFSDKNYPKRLAFLYLEEIHVGFVDELQRDHGDNWRNTVTTVARPYAFIKFDKFIQRKRKEYTDPSSSQNMSKLNNDLADIHNVMRKNIQEVLNRGEAIDRVSQMSSNLADRSKDFKWGAKKLSLQAMYQKYGPLVAIGLFVVLVLYFKFF 223          
BLAST of NO27G01670 vs. NCBI_GenBank
Match: XP_012198434.1 (hypothetical protein SPRG_04635 [Saprolegnia parasitica CBS 223.65] >KDO30734.1 hypothetical protein SPRG_04635 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 261.2 bits (666), Expect = 3.100e-66
Identity = 126/223 (56.50%), Postives = 164/223 (73.54%), Query Frame = 0
Query:    1 MIFLTMAARVQDGLLLVASTDAAHEMSEQMDVYKSQAKQLLRKLNARSPAKQIIESGPCSFFYLLDQNICYLTLADKGYPRKLLFSYLEEIKDGFIQELSRDFGPEWKRQVETAARPYAFIKFDKFIQSKRRDYLDPTSRRNTSKLTEDLADISSIMKKNIQEVLNRGERLDNISQTSSKLVNDSKKYKWGAKKLSMMALYQQYAPFLVLGGIALVVIYLKFF 224
            M  LT  ARV DG++LVAS ++A +  + +D YK Q KQ+++KLN RSP K  IESGP  F YL+++  CYLT +DK YP++L F YLEEI  GF+ EL RD G  W+  V T ARPYAFIKFDKFIQ KR++Y DP+S +N SK+  DLADI ++M+KNIQEVLNRGE +D +SQ SS L + SK +KWGAKKLS+ A+YQ+Y P + +G   ++V+Y KFF
Sbjct:    1 MPILTFIARVSDGMILVASMESAGDYHDNLDTYKQQGKQIMKKLNQRSPTKCSIESGPYCFHYLIEEGNCYLTFSDKNYPKRLAFLYLEEIHAGFVDELQRDHGDNWRDTVTTIARPYAFIKFDKFIQRKRKEYTDPSSSQNMSKVNNDLADIHNVMRKNIQEVLNRGEAIDRVSQMSSNLADRSKDFKWGAKKLSLQAMYQKYGPLVAIGLFIVLVLYFKFF 223          
BLAST of NO27G01670 vs. NCBI_GenBank
Match: XP_009843914.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV66543.1 hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 260.8 bits (665), Expect = 4.000e-66
Identity = 124/223 (55.61%), Postives = 167/223 (74.89%), Query Frame = 0
Query:    1 MIFLTMAARVQDGLLLVASTDAAHEMSEQMDVYKSQAKQLLRKLNARSPAKQIIESGPCSFFYLLDQNICYLTLADKGYPRKLLFSYLEEIKDGFIQELSRDFGPEWKRQVETAARPYAFIKFDKFIQSKRRDYLDPTSRRNTSKLTEDLADISSIMKKNIQEVLNRGERLDNISQTSSKLVNDSKKYKWGAKKLSMMALYQQYAPFLVLGGIALVVIYLKFF 224
            M  LT  ARV DG+LLVAS ++A + ++ +D YK Q KQ+L+KLN RSP K  I+SG  +F YL+++ +CYLTL+DK YP++L F YLE+I  GFI EL RD G  W+  V T ARPYAFIKFDK+IQ KR++Y DP+S +N SKL  DLADI ++M++NIQEVLNRGE +D +SQ SS + + SK++KWGAKKLS+ A+YQ+Y P + +    ++V+Y KFF
Sbjct:    1 MPILTFIARVSDGMLLVASMESAGDYNDNLDTYKQQGKQILKKLNQRSPGKCSIDSGAYAFHYLIEEGVCYLTLSDKNYPKRLAFLYLEDIHGGFIDELRRDHGDNWRDTVTTVARPYAFIKFDKYIQKKRKEYTDPSSSQNMSKLNNDLADIHNVMRQNIQEVLNRGEAIDRVSQISSNIADRSKEFKWGAKKLSLQAMYQKYGPLVAIALFVVLVVYFKFF 223          
BLAST of NO27G01670 vs. NCBI_GenBank
Match: XP_008877922.1 (hypothetical protein H310_12576 [Aphanomyces invadans] >ETV93580.1 hypothetical protein H310_12576 [Aphanomyces invadans])

HSP 1 Score: 260.0 bits (663), Expect = 6.800e-66
Identity = 124/223 (55.61%), Postives = 167/223 (74.89%), Query Frame = 0
Query:    1 MIFLTMAARVQDGLLLVASTDAAHEMSEQMDVYKSQAKQLLRKLNARSPAKQIIESGPCSFFYLLDQNICYLTLADKGYPRKLLFSYLEEIKDGFIQELSRDFGPEWKRQVETAARPYAFIKFDKFIQSKRRDYLDPTSRRNTSKLTEDLADISSIMKKNIQEVLNRGERLDNISQTSSKLVNDSKKYKWGAKKLSMMALYQQYAPFLVLGGIALVVIYLKFF 224
            M  LT  ARV DG+LLVAS ++A + ++ +D YK Q KQ+++KLN RSP K  I+SG  +F YL++  +CYLTL+DK YP++L+F YLE+I  GFI EL RD G  W+  V T ARPYAFIKFDK+IQ KR++Y DP+S +N SKL  DLADI ++M++NIQEVLNRGE +D +SQ SS + + SK++KWGAKKLS+ A+YQ+Y P + +    ++VIY KFF
Sbjct:    1 MPILTFIARVSDGMLLVASMESAGDYNDNLDTYKQQGKQIMKKLNQRSPGKCSIDSGAYAFHYLIEDGVCYLTLSDKNYPKRLVFLYLEDIHAGFIDELRRDHGDNWRDTVTTVARPYAFIKFDKYIQKKRKEYTDPSSSQNMSKLNNDLADIHNVMRQNIQEVLNRGEAIDRVSQISSNIADRSKEFKWGAKKLSLQAMYQKYGPLVAIALFVVLVIYFKFF 223          
BLAST of NO27G01670 vs. NCBI_GenBank
Match: XP_008611589.1 (hypothetical protein SDRG_07531 [Saprolegnia diclina VS20] >EQC34717.1 hypothetical protein SDRG_07531 [Saprolegnia diclina VS20])

HSP 1 Score: 259.6 bits (662), Expect = 8.900e-66
Identity = 125/223 (56.05%), Postives = 163/223 (73.09%), Query Frame = 0
Query:    1 MIFLTMAARVQDGLLLVASTDAAHEMSEQMDVYKSQAKQLLRKLNARSPAKQIIESGPCSFFYLLDQNICYLTLADKGYPRKLLFSYLEEIKDGFIQELSRDFGPEWKRQVETAARPYAFIKFDKFIQSKRRDYLDPTSRRNTSKLTEDLADISSIMKKNIQEVLNRGERLDNISQTSSKLVNDSKKYKWGAKKLSMMALYQQYAPFLVLGGIALVVIYLKFF 224
            M  LT  ARV DG++LVAS ++  +  + +D YK Q KQ+++KLN RSP K  IESGP  F YL+++  CYLT +DK YP++L F YLEEI  GF+ EL RD G  W+  V T ARPYAFIKFDKFIQ KR++Y DP+S +N SK+  DLADI ++M+KNIQEVLNRGE +D +SQ SS L + SK +KWGAKKLS+ A+YQ+Y P + +G   ++V+Y KFF
Sbjct:    1 MPILTFIARVSDGMILVASMESTGDYHDNLDTYKQQGKQIMKKLNQRSPTKCSIESGPYCFHYLIEEGNCYLTFSDKNYPKRLAFLYLEEIHAGFVDELQRDHGDNWRDTVTTIARPYAFIKFDKFIQRKRKEYTDPSSSQNMSKVNNDLADIHNVMRKNIQEVLNRGEAIDRVSQMSSNLADRSKDFKWGAKKLSLQAMYQKYGPLVAIGLFIVLVLYFKFF 223          
BLAST of NO27G01670 vs. NCBI_GenBank
Match: OQR82114.1 (vesicle-trafficking protein SEC22b [Thraustotheca clavata])

HSP 1 Score: 259.2 bits (661), Expect = 1.200e-65
Identity = 127/223 (56.95%), Postives = 165/223 (73.99%), Query Frame = 0
Query:    1 MIFLTMAARVQDGLLLVASTDAAHEMSEQMDVYKSQAKQLLRKLNARSPAKQIIESGPCSFFYLLDQNICYLTLADKGYPRKLLFSYLEEIKDGFIQELSRDFGPEWKRQVETAARPYAFIKFDKFIQSKRRDYLDPTSRRNTSKLTEDLADISSIMKKNIQEVLNRGERLDNISQTSSKLVNDSKKYKWGAKKLSMMALYQQYAPFLVLGGIALVVIYLKFF 224
            M  LT  ARV DG+LLVAS ++A + ++ +D YK Q KQ+++KLN RSP K  IESG   F YL+D+  CYLTL+DK YP++L F YLEEI  GF+ EL RD G  W+  V T ARPYAFIKFDKFIQ KR++Y DP+S +N SKL  DLADI ++M+KNIQ+VL+RGE +D +SQ SS L + SK +KWGAKKLS+ A+YQ+Y P + +G   ++V+Y KFF
Sbjct:    1 MPILTFIARVADGMLLVASMESAGDYNDNLDTYKQQGKQIMKKLNQRSPTKCSIESGSYCFHYLIDEGNCYLTLSDKNYPKRLAFLYLEEIHRGFVDELYRDHGENWRVVVTTVARPYAFIKFDKFIQRKRKEYTDPSSSQNMSKLNNDLADIHNVMRKNIQDVLSRGEAIDRVSQISSNLADRSKDFKWGAKKLSLQAMYQKYGPLVAIGLFIVLVLYFKFF 223          
BLAST of NO27G01670 vs. NCBI_GenBank
Match: XP_008900889.1 (hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >ETI53361.1 hypothetical protein, variant 3 [Phytophthora parasitica P1569] >ETK93208.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETL46623.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETL99769.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETM52912.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETN13824.1 hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >ETP23149.1 hypothetical protein, variant 3 [Phytophthora parasitica CJ01A1] >ETP51161.1 hypothetical protein, variant 3 [Phytophthora parasitica P10297] >KUF84893.1 Vesicle-trafficking protein SEC22b [Phytophthora nicotianae])

HSP 1 Score: 255.8 bits (652), Expect = 1.300e-64
Identity = 123/223 (55.16%), Postives = 167/223 (74.89%), Query Frame = 0
Query:    1 MIFLTMAARVQDGLLLVASTDAAHEMSEQMDVYKSQAKQLLRKLNARSPAKQIIESGPCSFFYLLDQNICYLTLADKGYPRKLLFSYLEEIKDGFIQELSRDFGPEWKRQVETAARPYAFIKFDKFIQSKRRDYLDPTSRRNTSKLTEDLADISSIMKKNIQEVLNRGERLDNISQTSSKLVNDSKKYKWGAKKLSMMALYQQYAPFLVLGGIALVVIYLKFF 224
            M  +T  ARV DG+LLVAS ++  + +  +D YK QAKQ++++L+ RSP K  IESG  +F YL+ + +CYLTLAD+G+P++L F YLEE+  GF++EL RD G  W+  V T ARPYAFIKFDKFIQ KR++Y DP+S +N  +L +DLADI +IM+KNIQEVLNRGER++++S+ SS L + SK  KWGAKKL M A+Y+QY P + +    L+VIY+KFF
Sbjct:    1 MPIITFVARVSDGMLLVASMESIGDANGNLDTYKQQAKQIMKRLDQRSPTKCSIESGAYTFHYLIQEGVCYLTLADRGFPKRLAFLYLEEVHAGFVEELERDSGSNWRDVVTTVARPYAFIKFDKFIQKKRKEYADPSSSQNMHRLNDDLADIHNIMRKNIQEVLNRGERVEHVSRISSNLADRSKDLKWGAKKLRMQAIYRQYGPIVAVALFVLLVIYIKFF 223          
BLAST of NO27G01670 vs. NCBI_GenBank
Match: CCA14301.1 (vesicletrafficking protein SEC22b putative [Albugo laibachii Nc14])

HSP 1 Score: 255.4 bits (651), Expect = 1.700e-64
Identity = 124/223 (55.61%), Postives = 168/223 (75.34%), Query Frame = 0
Query:    1 MIFLTMAARVQDGLLLVASTDAAHEMSEQMDVYKSQAKQLLRKLNARSPAKQIIESGPCSFFYLLDQNICYLTLADKGYPRKLLFSYLEEIKDGFIQELSRDFGPEWKRQVETAARPYAFIKFDKFIQSKRRDYLDPTSRRNTSKLTEDLADISSIMKKNIQEVLNRGERLDNISQTSSKLVNDSKKYKWGAKKLSMMALYQQYAPFLVLGGIALVVIYLKFF 224
            M  +T  AR+ DG+LLVAS ++  + S  +D+YK QAKQ++++L+ RS  K  IESG  +F YL+ +N+CYLTL+D+ +P++L F YLEEI+ GFI+EL RD    W+  V TAARPYAFIKFDKFIQ KR++Y DP+S +N S+L  DLADI +IM++NIQEVLNRGER++++S+ SS L + SK  KWGAKKL M A+Y+QY P   +G   L+VIY+KFF
Sbjct:    1 MPIITFVARISDGMLLVASMESVGDTSGNLDMYKQQAKQIMKRLDQRSATKCSIESGKYTFHYLIHENVCYLTLSDRSFPKRLAFLYLEEIQKGFIEELERDHHGSWRDAVTTAARPYAFIKFDKFIQRKRKEYTDPSSSQNMSRLNNDLADIHNIMRQNIQEVLNRGERVEHVSRISSNLADRSKDLKWGAKKLRMQAIYRQYGPIAAVGAFILLVIYIKFF 223          
BLAST of NO27G01670 vs. NCBI_GenBank
Match: ETO82046.1 (hypothetical protein, variant 3 [Phytophthora parasitica P1976])

HSP 1 Score: 254.6 bits (649), Expect = 2.900e-64
Identity = 123/223 (55.16%), Postives = 166/223 (74.44%), Query Frame = 0
Query:    1 MIFLTMAARVQDGLLLVASTDAAHEMSEQMDVYKSQAKQLLRKLNARSPAKQIIESGPCSFFYLLDQNICYLTLADKGYPRKLLFSYLEEIKDGFIQELSRDFGPEWKRQVETAARPYAFIKFDKFIQSKRRDYLDPTSRRNTSKLTEDLADISSIMKKNIQEVLNRGERLDNISQTSSKLVNDSKKYKWGAKKLSMMALYQQYAPFLVLGGIALVVIYLKFF 224
            M  +T  ARV DG+LLVAS ++  + +  +D YK QAKQ++++L+ RSP K  IESG  +F YL+ + +CYLTLAD+G+P++L F YLEE+  GF++EL RD G  W+  V T ARPYAFIKFDKFIQ KR++Y DP+S +N  +L +DLADI +IM+KNIQEVLNRGER++++S+ SS L + SK  KWGAKKL M A+Y+QY P + +    L+VIY KFF
Sbjct:    1 MPIITFVARVSDGMLLVASMESIGDANGNLDTYKQQAKQIMKRLDQRSPTKCSIESGAYTFHYLIQEGVCYLTLADRGFPKRLAFLYLEEVHAGFVEELERDSGSNWRDVVTTVARPYAFIKFDKFIQKKRKEYADPSSSQNMHRLNDDLADIHNIMRKNIQEVLNRGERVEHVSRISSNLADRSKDLKWGAKKLRMQAIYRQYGPIVAVALFVLLVIYTKFF 223          
BLAST of NO27G01670 vs. NCBI_GenBank
Match: OWZ23281.1 (Vesicle-trafficking protein SEC22b [Phytophthora megakarya])

HSP 1 Score: 254.2 bits (648), Expect = 3.700e-64
Identity = 123/223 (55.16%), Postives = 166/223 (74.44%), Query Frame = 0
Query:    1 MIFLTMAARVQDGLLLVASTDAAHEMSEQMDVYKSQAKQLLRKLNARSPAKQIIESGPCSFFYLLDQNICYLTLADKGYPRKLLFSYLEEIKDGFIQELSRDFGPEWKRQVETAARPYAFIKFDKFIQSKRRDYLDPTSRRNTSKLTEDLADISSIMKKNIQEVLNRGERLDNISQTSSKLVNDSKKYKWGAKKLSMMALYQQYAPFLVLGGIALVVIYLKFF 224
            M  +T  ARV DG+LLVAS ++  + +  +D YK QAKQ++++L+ RSP K  IESG  +F YL+ + +CYLTLAD+G+P++L F YLEE+  GF++EL RD G  W+  V T ARPYAFIKFDKFIQ KR++Y DP S +N  +L +DLADI +IM+KNIQEVLNRGER++++S+ SS L + SK  KWGAKKL M A+Y+QY P + +    L+VIY+KFF
Sbjct:    1 MPIITFVARVSDGMLLVASMESIGDANGNLDTYKQQAKQIMKRLDQRSPTKCSIESGAYTFHYLIQEGVCYLTLADRGFPKRLAFLYLEEVHKGFVEELERDSGNNWRDVVTTVARPYAFIKFDKFIQKKRKEYADPNSSQNMHRLNDDLADIHNIMRKNIQEVLNRGERVEHVSRISSNLADRSKDLKWGAKKLRMQAIYRQYGPIVAVVLFVLLVIYIKFF 223          
The following BLAST results are available for this feature:
BLAST of NO27G01670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
OQR82296.16.200e-6756.95vesicle-trafficking protein SEC22b [Achlya hypogyn... [more]
XP_012198434.13.100e-6656.50hypothetical protein SPRG_04635 [Saprolegnia paras... [more]
XP_009843914.14.000e-6655.61hypothetical protein, variant [Aphanomyces astaci]... [more]
XP_008877922.16.800e-6655.61hypothetical protein H310_12576 [Aphanomyces invad... [more]
XP_008611589.18.900e-6656.05hypothetical protein SDRG_07531 [Saprolegnia dicli... [more]
OQR82114.11.200e-6556.95vesicle-trafficking protein SEC22b [Thraustotheca ... [more]
XP_008900889.11.300e-6455.16hypothetical protein, variant 3 [Phytophthora para... [more]
CCA14301.11.700e-6455.61vesicletrafficking protein SEC22b putative [Albugo... [more]
ETO82046.12.900e-6455.16hypothetical protein, variant 3 [Phytophthora para... [more]
OWZ23281.13.700e-6455.16Vesicle-trafficking protein SEC22b [Phytophthora m... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR061ncniR061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR103ngnoR103Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO27G01670.1NO27G01670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100728g1gene9849Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO27G01670.1NO27G01670.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO27G01670 ID=NO27G01670|Name=NO27G01670|organism=Nannochloropsis oceanica|type=gene|length=2620bp
CAGCTACAGGTAGCCGGTACCAAGTCTCAACTCCAGGGCAACGGGCCGCG
TGCTTCTCTTCGTCTTCCCCACGCGCCGCCTGATCAGgtaggcaaccacc
ctccatccctccattcctggcgtcattcttgaatttgtcctccttcctcc
tgatccccactacactccatagGCATCAGGGACCAGCCCTTTGAGGAGAT
GATCTTCCTTACCATGGCTGCGCGGGTGCAGGACGGCCTCTTGCTGgtac
gtttatcatcacgcacggaacttgcgtactcctccttccctcgcttctta
ccctccacccctccctccctccctccctcgctcccctcgcccccagGTGG
CCTCCACAGACGCCGCTCACGAGATGTCCGAGCAAATGGACGTGTACAAA
AGTCAGGCCAAACAGCTGCTACGAAAACTCAACGCACGCTCACCTGCAAA
ACAAATTATTGAGAGTGGCCCTTGCTCCTTCTTgtacgtaaatgaagagg
cggaaaggaagggaaaaagctaactactaatagattcagtagatatggcc
tattgtatgatagttaggacagatagatatggaagatatgctagacgtct
ccgccgttctaaactttgaactcttgagcgttatttctcgtcatcgcctc
ctctcctctccctccctccctccctcccccccttcccccctccccacagT
TACTTGCTCGACCAGAACATCTGTTACCTGACCCTAGCCGACAAGGGCTA
CCCACGCAAGCTCCTCTTCTCCTACCTCGAGGAAATCAAGGACGGCTTCA
TTCAAGAATTGTCGCGAGATTTCGGCCCTGAgtaagtcccttccttcttc
cctacctacctccctccgttccctcctcctttcattcatccttcctcgtc
gcctaataaggatatattagcatgtatggttgttactcatgtatattacc
tacatatattaatatatgtccagGTGGAAGAGGCAGGTCGAGACAGCCGC
CCGACCCTACGCCTTCATCAAGTTCGgtgggtgccctccctcacttcctc
ctttcttccttccctccctcctccttcgaatcttcttcgaatctcctttg
aatctccttcgaatctccttgcctttaatcacctccacgtcccatctctc
tctgtctcccatccccttgcatttatgcttcctctttcccccctccctcc
ctcccccctccctccctccctccctccctccctccctcagACAAGTTCAT
TCAAAGCAAACGCCGCGATTACCTCGACCCAACATCACGCCGGAACACCT
CCAAGgtagggagggagggagggaggaagggagggagggagggagggagg
gagggagggagggagggacgaacgggtgactgaccagggtttccagaaag
ttccctcaccttccctccctccctccctccctccctccctccctctagCT
CACAGAAGACCTGGCAGACATCAGCTCGATCATGAAGAAAAACATCCAAG
AAGTCCTCAACCGTGGCGAACGGCTTGACAgtgcgtcccctccttccctc
ctttcccccatccccccctccttccctcgcggcatctaacgctctctttg
atcacaaatgtatcaacccgtcatatcatcgcctccagtttcatcaaaca
taaataaggccctagggccgccctccctttccaaccccttctcgattaat
tgtttcccttccctccctccctccctccctccctccctccctccccccca
ccctccctccctccctccctccctccctccccagACATCTCCCAGACCTC
TTCCAAGCTCGTGAATGACTCCAAGAAATACAAATGGGGCGCGAAGAAAC
TTTCCATGATGgtggggcaagagaaagggatggagaaagggagggaagat
gaaagccacactcatttgattatgtgggcgccgtattcctcaaggttgat
tgctctgctcacctttctccctctatccctccctccatttctccttccct
ccctccctccctccctccctccattcctccttccttccctccctccctcc
ctctcttcctccttcagGCCCTCTATCAACAGTACGCGCCTTTCCTCGTC
CTGGGCGGTATCGCCCTCGTCGTTATTTACCTTAAATTCTTTTGGTGAGA
AGAAGGGGGAAATTAACACTTTCCCTCCCTCCCTTTCTGTCTTCCTGTCT
GTCTCTCCCTCTAACCGACCATCAGTAGAATGACCCGCATTCTAGAAGGA
GGGAAAGGAAACAAAGAAACACTCAAACGGAGCATGCCTCTGAGGACGAG
GAGCCGGTTGAGGTGTGTCTCGGTGTTGGCCTTTTTTCTCTTTCTGTCTT
CTTTTTCCTTTTCTTTCTTTTCCCTTCTTTTATGATTTCTCCGTCTGTGA
GCCAAGAAAGACGCATGGCTCGAGAAGGGAAAGGAGAAGGAAGCAGGAGG
GAGAGTGAAAGAGAAGGGCAAGGATGGGAGATGAAGAATGAAAGAGAAGA
GTCTGCAGTCAACGTATTCTTAAAGCGAAATCATCGACCTAATACCGTTA
AAAGAGATCAAGGCTTGTGACGTCCCGCCAAAATGATTTTAGTGATTTTA
CATCCGCCCAACAAAAAGGT
back to top

protein sequence of NO27G01670.1

>NO27G01670.1-protein ID=NO27G01670.1-protein|Name=NO27G01670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=225bp
MIFLTMAARVQDGLLLVASTDAAHEMSEQMDVYKSQAKQLLRKLNARSPA
KQIIESGPCSFFYLLDQNICYLTLADKGYPRKLLFSYLEEIKDGFIQELS
RDFGPEWKRQVETAARPYAFIKFDKFIQSKRRDYLDPTSRRNTSKLTEDL
ADISSIMKKNIQEVLNRGERLDNISQTSSKLVNDSKKYKWGAKKLSMMAL
YQQYAPFLVLGGIALVVIYLKFFW*
back to top
Synonyms
Publications