NO27G01580, NO27G01580 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO27G01580 vs. NCBI_GenBank
Match: XP_005854957.1 (zinc metalloendopeptidase, partial [Nannochloropsis gaditana CCMP526] >EKU21397.1 zinc metalloendopeptidase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 282.7 bits (722), Expect = 2.400e-72 Identity = 153/306 (50.00%), Postives = 185/306 (60.46%), Query Frame = 0 Query: 242 FNITLINVNPAQTGLDAFMSSAQARWQRIITAEAEDINLGASVDLTAGRF-PSFS-YSGPVDDIIIFYALTTLPPLVLGSAGPTYLRGDNAQPIAGTMRFSIDYFNDGDITEDVILHEMAHVLGFGTTWRSKGCLSKECDENTPAPVTYTCANGLAQYAMIETCTTLFPDLTIETSTGRPGSDCGHWAEAFYKTELMTPTTAASLESSLLSRFTIGAMADIWGSVNYAEADTFAC----TAGISSSPQAQSDNAPISEMLYPVNGGEVILTMAQAGQTIYDYQLTGLSEEERQAVLDALANLGKTI 542 FNITLIN P T +D+ M SA+ARW II A + + DLT GRF P F Y VDDIIIFY L TL P VLGSAGPT++R + QP A TM FS +F+ ++TED ILHEMAH LGFG W GC S C + A V+Y C G+AQY PDL IETS+G GSDCGHW EA Y ELMTP + LSRFTIGAM+DIWG VN EA+ F C A + S PQ S +L PVN + ++ A G+T+Y++QL L+ ERQ V+DALA +GKT+ Sbjct: 29 FNITLINAQPNDTRMDSMMISAKARWTGIILATPSSVPFSGTDDLTGGRFLPEFGPYYSAVDDIIIFYRLATLSPGVLGSAGPTFVRTPSFQPYAATMEFSTTFFDASEVTEDTILHEMAHALGFGLVWDELGCYSTTCTVGSNANVSYICDQGVAQYNQTNCPDVGLPDLLIETSSGSAGSDCGHWTEADYDNELMTPISEIPEVDQPLSRFTIGAMSDIWGPVNVLEANNFTCPGVGAASVMSGPQ------HTSILLRPVNIKDALIQGAAMGETVYEHQLVNLTPAERQEVVDALAAMGKTV 328
BLAST of NO27G01580 vs. NCBI_GenBank
Match: EWM20104.1 (zinc metalloendopeptidase [Nannochloropsis gaditana]) HSP 1 Score: 269.2 bits (687), Expect = 2.700e-68 Identity = 147/292 (50.34%), Postives = 176/292 (60.27%), Query Frame = 0 Query: 256 LDAFMSSAQARWQRIITAEAEDINLGASVDLTAGRF-PSFS-YSGPVDDIIIFYALTTLPPLVLGSAGPTYLRGDNAQPIAGTMRFSIDYFNDGDITEDVILHEMAHVLGFGTTWRSKGCLSKECDENTPAPVTYTCANGLAQYAMIETCTTLFPDLTIETSTGRPGSDCGHWAEAFYKTELMTPTTAASLESSLLSRFTIGAMADIWGSVNYAEADTFAC----TAGISSSPQAQSDNAPISEMLYPVNGGEVILTMAQAGQTIYDYQLTGLSEEERQAVLDALANLGKTI 542 +D+ M SA+ARW II A + + DLT GRF P F Y VDDIIIFY L TL P VLGSAGPT++R + QP A TM FS F+ GD+TED ILHEMAH LGFG W GC S C + A V+Y C G+AQY PDL IETSTG GSDCGHW EA Y ELMTP + LSRFTIGAM+DIWG VN EA+ F C A + S PQ S +L PVN + ++ A G+T+Y++QL L+ ERQ V+DALA +GKT+ Sbjct: 1 MDSMMISAKARWTGIILATPSSVAFSGTNDLTDGRFLPEFGPYYSAVDDIIIFYRLATLSPGVLGSAGPTFVRTPSFQPYAATMEFSTTLFDAGDVTEDTILHEMAHALGFGLVWDELGCYSTTCTVGSNANVSYICDQGVAQYNQTNCPDVGLPDLLIETSTGSAGSDCGHWTEADYDNELMTPISEIPEVDQPLSRFTIGAMSDIWGPVNVLEANNFTCPGVGAASVMSGPQ------HTSILLRPVNIKDALIQGAAMGETVYEHQLVNLTPSERQEVVDALAAMGKTV 286
BLAST of NO27G01580 vs. NCBI_GenBank
Match: XP_013902575.1 (hypothetical protein MNEG_4401 [Monoraphidium neglectum] >KIZ03556.1 hypothetical protein MNEG_4401 [Monoraphidium neglectum]) HSP 1 Score: 127.5 bits (319), Expect = 1.300e-25 Identity = 96/270 (35.56%), Postives = 131/270 (48.52%), Query Frame = 0 Query: 243 NITLINVNPAQTGLDAFMSSAQARWQRIITAEAEDINLGASVDLTAGRFPSFS-YSGPVDDIIIF------------------YALTTLPPLVLGSAGPTYLRGDNAQ----PIAGTMRF---SIDYFNDGDITEDVILHEMAHVLGFGTTWRSKGCLSKECDENTPAPVTYTCANGLAQYAMIETCTTLFPDLTIETSTGRPGSDCGHWAEAFYKTELMTPTTAASLESSLLSRFTIGAMADIW--GSVNYAEADTFACTAGISSSPQA 485 NI L+ + + DA +A+A+W+ I+ + D A++DL+ +S VDDI+I Y ++TL LG AGPTY R D ++ P+A M F I D + V+LHEM H LG GT GC+ K C + + + C N A+Y I C T P IET G GS CGHW+E KTELMTP + + LS TIGA+ DI+ GSV+Y +AD F+C I +S A Sbjct: 67 NIQLVRIG-TDSSQDATFQAAKAKWESILKVDVPDFVNTANIDLSDNWVSGYSNKQRNVDDIVIIYLPVAALAAARGRNASARYGMSTLSGDTLGWAGPTYFRNDGSKYSNTPVAAVMMFDKNKITSLGGQDNFKIVVLHEMGHALGLGTVDDRIGCI-KNCVAGSKSNNFWQCKNANAKYLSI-GCKTQVP---IETEMG-DGSGCGHWSETKLKTELMTPVLDDGVPNP-LSVVTIGALEDIYGDGSVDYGQADAFSCQTNIVASVAA 328
BLAST of NO27G01580 vs. NCBI_GenBank
Match: XP_005855033.1 (hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526] >EKU21331.1 hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 121.3 bits (303), Expect = 9.200e-24 Identity = 76/196 (38.78%), Postives = 108/196 (55.10%), Query Frame = 0 Query: 1 MRRALSLLVLGITLALTAAQPTLTLTSIKAVDVARANNDRWSLKGYLSDPDKNYVPAIGEVGMTAALQNSNDVSLNDVVFNPADCTLLKNDKGIICKARGIHLSLKRTKRVPKDATIKAQKNHNTTSSASSYYRVSGVFRR-QVFNTIISTPLTAIFAIDGFP-NLSTTSSKCTEKDGIRASKYLCKTAQSHGPAP 195 MRRA LL LGITL +TA Q TL ++K +D ++ D+WS+KG L DP VP IG+ G+T LQ+ +L F +DC L +N +G+ CK RG +S+K ++R PK A ++ N+N+T YY SG+FRR Q I PLT + + P S S C+EK I+ + + + GP P Sbjct: 1 MRRAFFLLALGITLVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRR-PKGANVQ-NSNYNST---GGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEK--IKGAGRTTRITCTPGPTP 189
BLAST of NO27G01580 vs. NCBI_GenBank
Match: EWM30036.1 (hypothetical protein Naga_100179g1 [Nannochloropsis gaditana]) HSP 1 Score: 120.6 bits (301), Expect = 1.600e-23 Identity = 76/196 (38.78%), Postives = 108/196 (55.10%), Query Frame = 0 Query: 1 MRRALSLLVLGITLALTAAQPTLTLTSIKAVDVARANNDRWSLKGYLSDPDKNYVPAIGEVGMTAALQNSNDVSLNDVVFNPADCTLLKNDKGIICKARGIHLSLKRTKRVPKDATIKAQKNHNTTSSASSYYRVSGVFRR-QVFNTIISTPLTAIFAIDGFP-NLSTTSSKCTEKDGIRASKYLCKTAQSHGPAP 195 MRRA LL LGITL +TA Q TL ++K +D ++ D+WS+KG L DP VP IG+ G+T LQ+ +L F +DC L +N +G+ CK RG +S+K ++R PK A ++ N+N+T YY SG+FRR Q I PLT + + P S S C+EK I+ + + + GP P Sbjct: 20 MRRAFFLLALGITLVMTAGQDLFTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRR-PKGAYVQ-NSNYNST---GGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEK--IKGAGRTTRITCTPGPTP 208
BLAST of NO27G01580 vs. NCBI_GenBank
Match: WP_018467545.1 (PKD domain-containing protein [Meiothermus timidus]) HSP 1 Score: 119.8 bits (299), Expect = 2.700e-23 Identity = 85/251 (33.86%), Postives = 121/251 (48.21%), Query Frame = 0 Query: 242 FNITLINVNPAQTGLDAFMSSAQARWQRIITAEAEDINLGASVDLTAGRFPSFSYSGPVDDIIIFYALTTL--PPLVLGSAGPTYLRGDNAQPIAGTMRF---SIDYFNDGDITEDVILHEMAHVLGFGTTWRSKGCLSKECDENTPAPVTYTCANGLAQYAMIETCTTLFPDLTIETSTGRPGSDC------GHWAEAFYKTELMTPTTAASLESSLLSRFTIGAMADIWGSVNYAEADTFACTAGISSS 482 +NITL TG A +A A+W ++IT INL S D A FP+F +G VDDI+I A+ T+ P +LG AGP + R N + G MRF +D ++VI HEM HVLG GT W L +TP + A +A++ + + P P S C GHW EA + E+MT + ++ LS+ TIG++ D+ SVNY+ AD + + +SS Sbjct: 123 YNITLRFTGTLTTGQQAAFDAAAAKWGQVITQGFASINLNISADECASGFPAF--NGSVDDILIDAAVVTIDGPGGILGQAGPCFTRISNDLTVYGIMRFDSADLDALESSGQLDEVIFHEMGHVLGIGTLWNYNRSLLTGAGTDTP---LFVGAKAVAEWQALGGSGNV-PVENCRDKNNNPISGCGSGTRDGHWREAVFDNEVMTGYLNSG--ANPLSKVTIGSLEDLGYSVNYSAADPYTLPSLQASS 365
BLAST of NO27G01580 vs. NCBI_GenBank
Match: WP_013456833.1 (PKD domain-containing protein [Oceanithermus profundus] >ADR35663.1 PKD domain containing protein [Oceanithermus profundus DSM 14977]) HSP 1 Score: 119.0 bits (297), Expect = 4.500e-23 Identity = 81/252 (32.14%), Postives = 124/252 (49.21%), Query Frame = 0 Query: 242 FNITLINV-NPAQTGLDAFMSSAQARWQRIITAEAEDINLGASVDLTAGRFPSFSYSGPVDDIIIFYALTTLPPL--VLGSAGPTYLRGDNAQ-----PIAGTMRF---SIDYFNDGDITEDVILHEMAHVLGFGTTWRSKGCL-----SKECDENTPAPVTYTCANGLAQYAMIETCTTLFPDLTIETSTGRPGSDCGHWAEAFYKTELMTPTTAASLESSLLSRFTIGAMADIWGSVNYAEADTFACTAG 478 F+I ++ V PA + A +A ARW++++T + D+ + R P Y G +DD++I + + +LGSAGP Y+RGD Q P G M+F +D E VILHEM HVLG GT W + + C + + VTY + + + + + +TG G+ CGHW EA + TELMT ++ + LSR T+G++ D+ +VNYA AD +A +G Sbjct: 514 FDIRILFVEEPADPDVRAAFENAAARWEQVLTGDLSDVQVNVPAGACLDRNP--GYQGTIDDLLIVADVVPIDGAYGILGSAGPCYVRGDAGQPDYYLPFFGVMQFDSADLDRMKQNGTLEVVILHEMGHVLGIGTLWEAGPFAFLNHNAANCQD--ASDVTYDGPAAMDAWHALGAVGEVHVE-----NTGGAGTKCGHWREATFDTELMTGWIDGAV--APLSRVTVGSLDDLGYAVNYAAADGYALPSG 754
BLAST of NO27G01580 vs. NCBI_GenBank
Match: EWM30045.1 (hypothetical protein Naga_101600g1 [Nannochloropsis gaditana]) HSP 1 Score: 116.7 bits (291), Expect = 2.300e-22 Identity = 75/195 (38.46%), Postives = 112/195 (57.44%), Query Frame = 0 Query: 1 MRRALSLLVLGITLALTAAQPTLTLTSIKAVDVARANNDRWSLKGYLSDPDKNYVPAIGEVGMTAALQNSNDVSLNDVVFNPADCTLLKNDKGIICKARGIHLSLKRTKRVPKDATIKAQKNHNTTSSASSYYRVSGVFRR-QVFNTIISTPLTAIFAIDGFPNLSTTSSKCTEKDGIRASKYLCKTAQSHGPAP 195 MRR LSLL LG+TL +TA Q TL ++K + ++ D+WS+KG L +P N VPAIG++G+T L + + L F +C LL+N +G+ CK G +S+KRT+R PK A +K+ +++T YY SG+FRR Q + TPLT + + G L S C+E+ + + + K + GPAP Sbjct: 1 MRRILSLLALGVTLVMTAGQ-EFTLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLDPLASTAFAATNCKLLRNGRGVRCKKMGARVSIKRTRR-PKGAKVKSSNSNST----GGYYGASGMFRRLQFLQDPVVTPLT-VQVVVGSTTLPAIVSTCSER--TKGAGRITKITCTPGPAP 186
BLAST of NO27G01580 vs. NCBI_GenBank
Match: WP_011530793.1 (Ig-like protein, group 2 [Deinococcus geothermalis] >ABF45960.1 metalloendopeptidase M8 containing Ig-like domains [Deinococcus geothermalis DSM 11300]) HSP 1 Score: 114.8 bits (286), Expect = 8.600e-22 Identity = 98/268 (36.57%), Postives = 131/268 (48.88%), Query Frame = 0 Query: 242 FNITLI---NVNPAQTGLDAFMSSAQARWQRIITAEAEDINLGASVDLTAGRFPSFSYSGPVDDIIIFYALTTL--PPLVLGSAGPTYLRGDNAQPIAGTMRF-SIDYFN--DGDITEDVILHEMAHVLGFGTTW-RSKGCLSKECDENTPAPVTYTCANGLAQYAMIETCTTLFPDLTIETSTGRPGSDCGHWAEAFYKTELMTPTTAASLESSLLSRFTIGAMADIWGSVNYAEADTFACTAGISSSPQAQSDNAPISEMLYPVNG 501 FNIT+I N N +T AF S+A RW ++I A D+ +V L+ G + VDD+ I + + P VLG AGP +R P+ G M+F S D N + V+LHEM HVLG GT W RS + C+ T V Y A+GL +Y + P +E G G+ C HW E+ +++ELM T AS LSR T+GA+AD+ SVNYA AD + + AQS I E L NG Sbjct: 214 FNITVIFPANNNLTETQKAAFTSAAN-RWSQVIAAGLPDV---PNVRLSTGE------TVTVDDVTIVASGVAIDGPGNVLGQAGPRQVRNGTTLPLWGEMQFDSADLANMEANGTLQGVVLHEMGHVLGIGTLWDRSLSANASPCENAT--QVQYLGASGLREYRNLGGLAAGVP---VENQYGE-GTKCAHWKESVFQSELM--TGFASRGPMPLSRLTLGALADLGYSVNYAAADPYTI-----PNVGAQSLGQEIKERLITPNG 458
BLAST of NO27G01580 vs. NCBI_GenBank
Match: WP_084049546.1 (hypothetical protein [Deinococcus hopiensis] >SMB94097.1 Bacterial surface proteins containing Ig-like domains [Deinococcus hopiensis KR-140]) HSP 1 Score: 114.4 bits (285), Expect = 1.100e-21 Identity = 92/267 (34.46%), Postives = 126/267 (47.19%), Query Frame = 0 Query: 242 FNITLI--NVNPAQTGLDAFMSSAQARWQRIITAEAEDINLGASVDLTAGRFPSFSYSGPVDDIIIFYALTTL--PPLVLGSAGPTYLRGDNAQPIAGTMRF---SIDYFNDGDITEDVILHEMAHVLGFGTTW-RSKGCLSKECDENTPAPVTYTCANGLAQYAMIETCTTLFPDLTIETSTGRPGSDCGHWAEAFYKTELMTPTTAASLESSLLSRFTIGAMADIWGSVNYAEADTFACTAGISSSPQAQSDNAPISEMLYPVNG 501 F+IT++ + G A ++A RW ++I A D+ A V L+ G+ VDD+ I + T + P +LG AGP +R P+ G M F +D VI+HEM HVLG GT W R + C T V Y+ ANGL QY + P +E G G+ CGHW E+ ++ ELM T A+ S LSR T+GA+AD+ SVNYA AD + S S Q+ I E L +G Sbjct: 323 FDITVVFPSGTTLTAGQKAAFTNAATRWSQVIAAGLPDV---AGVTLSTGQ------KVTVDDVTIVASGTPIDGPGQILGQAGPRQVRPGTTLPLWGEMEFDSADLDSMEANGTLAGVIMHEMGHVLGIGTLWDRYLTVNATTCTSAT--KVQYSGANGLGQYKALNGQAAGVP---VEDQYGE-GTKCGHWKESVFQNELM--TGFANKGSMPLSRITLGALADLGYSVNYAAADAYTIP---SVSAQSVDPGTQIHERLITPDG 569 The following BLAST results are available for this feature:
BLAST of NO27G01580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO27G01580 ID=NO27G01580|Name=NO27G01580|organism=Nannochloropsis oceanica|type=gene|length=2732bpback to top protein sequence of NO27G01580.1 >NO27G01580.1-protein ID=NO27G01580.1-protein|Name=NO27G01580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=545bpback to top Synonyms
Publications
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