NO27G01550, NO27G01550 (gene) Nannochloropsis oceanica

Overview
NameNO27G01550
Unique NameNO27G01550
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1601
Alignment locationchr27:513421..515021 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr27genomechr27:513421..515021 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO27G01550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR061ncniR061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR103ngnoR103Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO27G01550.1NO27G01550.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO27G01550.1NO27G01550.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO27G01550 ID=NO27G01550|Name=NO27G01550|organism=Nannochloropsis oceanica|type=gene|length=1601bp
ATGTTCACCAGCGGCCTCCTCCCTTCCAAGGGGGTAACAGGAGGAAACGG
TGGAGGAGGAACAGGAGCAGGGCCACTTCTAGCATCACACGGACAAGGAA
AAGCACCGATATCATCATCACCATCCTCGTCATTTTTTAAGGGCGTTGGG
TCCAACAGTATGTCGTCGGCGTTCAGTACCAGCAATCATGATAGAGAAGG
AGGAGGAGGGGGAGCAAGCATGGAAGGGCAGGGAGAGGGAAACCCGCATA
TTGGCGTCTTAATAATGAAGAGTAGGAAAGTAGGAGCTGAGGAGgtaagg
ctcacaagaaggaaaggaagaaacgcaggagggagggagtgcggcgtgtc
tgcttgccaaatgagggatgtacggacccctccctaatatatggccctcc
ctccctccctctcctttatgccctctccccctgtccctctctcttcctcc
tgccctccctccctctttctttcccttactgactctttactctgcctctt
cctcctcctgcccctcctcctctcccttcttgctctttcgcagaccttac
tgccttgacccctccctccctccctccctccccccctcctttacccagGA
ACCTATCCCCCCCTCCCTTCTCGTACGCTTCTCCACCCTCCTCTCTCTCT
TCACTGTTCTCACGGGCCTTGCCTCCCTGGGCCTGCATTTGTTACTCCTC
TTGTCGCCAGCCACGAGGGCCATGATGACGgtaagagggagggagggagg
gagggtcagggagggagggagggagggaaggagggggggagggagggagg
gagggcccccttcctttcaccccatccctcatttaccacgttgacctcga
tcatcatttcttaaccctccctccctccctccctccctccctcctagTGG
TCCGAAATCATTATCCGCTTCTACGCCTGCTCCCTCACTCCCGTCCTCCT
CCTCGCCGAAACCAGCAGCTGCTCCCTCCTTCCCTCCCTTTCTCCCTCCC
TCGGGAGACACGTTACGGATCGCCTCTTCTCCTTCTTCCCCTCCCTCCAT
CACGCCCTCCCCCGCTCCCTCCTCCTCCTCTTCCTCGGGGCGCAGCTCAA
CCTCCCGTCACTCGCTGCCTCGGCGCTGTGGCCTGCGGAAGGCGAGGGAG
GGAAGGAGCAAGGTGCCTCCCCTGTTCATGCGGTGGCCGTAGCGATGATG
GGAGTTGCGGTAGGGCAGGTGCTGGTGAGCGTGGTGTGCTGCAGGGGAAG
GAATGGAGGGAGGGAGAGGGGGAGGATGAGGAGGAGGAAGgtacgtcatc
gcgacacgaggagagaaaggagggagggagtgaggacgggagggaaggag
ggagatgaagggaggggcctgatacagcaaccgagataaacgatgtttat
ggcgagcccacgctccacccgacatgttctcacccctccctccctccctc
cctccctccctccctccctcactccccactctctttcctcctctcctccc
tcccccagCCCCTCCCCCTGGACGTCCATTCCCTCCAAGCTCAGAAATTT
GAAATCGAGCGCCTGCTGGCAGAAACCGAAGACAGGCTTATGCACTTGTG
A
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protein sequence of NO27G01550.1

>NO27G01550.1-protein ID=NO27G01550.1-protein|Name=NO27G01550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=304bp
MFTSGLLPSKGVTGGNGGGGTGAGPLLASHGQGKAPISSSPSSSFFKGVG
SNSMSSAFSTSNHDREGGGGGASMEGQGEGNPHIGVLIMKSRKVGAEEEP
IPPSLLVRFSTLLSLFTVLTGLASLGLHLLLLLSPATRAMMTWSEIIIRF
YACSLTPVLLLAETSSCSLLPSLSPSLGRHVTDRLFSFFPSLHHALPRSL
LLLFLGAQLNLPSLAASALWPAEGEGGKEQGASPVHAVAVAMMGVAVGQV
LVSVVCCRGRNGGRERGRMRRRKPLPLDVHSLQAQKFEIERLLAETEDRL
MHL*
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Synonyms
Publications