NO27G01310, NO27G01310 (gene) Nannochloropsis oceanica

Overview
NameNO27G01310
Unique NameNO27G01310
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3082
Alignment locationchr27:421150..424231 +

Link to JBrowse

Properties
Property NameValue
DescriptionCoproporphyrinogen III oxidase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr27genomechr27:421150..424231 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0051536iron-sulfur cluster binding
GO:0051536iron-sulfur cluster binding
GO:0004109coproporphyrinogen oxidase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR034505Coproporphyrinogen-III_oxidase
IPR007197rSAM
IPR006638Elp3/MiaB/NifB
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006779porphyrin-containing compound biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
BLAST of NO27G01310 vs. NCBI_GenBank
Match: CBJ30711.1 (coproporphyrinogen III oxidase [Ectocarpus siliculosus])

HSP 1 Score: 310.5 bits (794), Expect = 1.200e-80
Identity = 196/495 (39.60%), Postives = 251/495 (50.71%), Query Frame = 0
Query:   52 TPSAPTPSTPLLPRALYVHLPFCRRRCFYCDFPIKVVGDGATAADKYSREYVQLVLREMKAAFGRTVREGGR-EERGGHWVEGVPWSLSELGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLLRLLLKEIEDLFGVSDGAEVSMEMDPGTFDEERLEAFLACGINRVSVGVQSFNQTLLSAAGRAHNRDEVRAALDLLRKPRKRARLNFSLDLISGLPFQSLEQWEESLREAIAVCPPHISLYDLQVEPGTAFGRWYGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTASMYVRASALLQEAGYDHYEVSNYAKPGFQCRHNRVYWEGVPFLALGMGAASYLDWHRFSRPRSLFNYTMWVHELEQEGWRKASG------LEEA--------------QKEMSKLQWQLDRLEDLLMVGLRLKEGVELYTLAQQTG 526
            T +   PS P  P ++YV+LPFCRRRCFYCDFPIKVVGD   AA   ++ YV  V+RE++A       E  +   RGG   +         GG+                                                                        L+ LL++ + + +G++ GAE+S+EMDPGTFDE RLEAFLA GI RVS+GVQSF+  LL A GRAH+  +V  A++LLRK +     NFS+DL+SGLP Q++EQWE +L EAIA    HIS+YDLQVE GT FGRW+                                            + A MY  AS +L +AGYDHYE+SNYA+PGFQ RHNR YWE VPFLA G GAAS++D +RFSRPR L  Y  WV ELE+EGW KA+G       EE               +   S+   + D L D +M+G RLKEG++L  +A + G
Sbjct:   42 TQALALPSLP--PSSVYVNLPFCRRRCFYCDFPIKVVGDRPGAAAAAAKPYVDNVVREIRATAAAAAIEAPKLPARGGAGGDDTMEHSGRGGGV--------------------------------------------------------KTLFFGGGTPSLCPPELVGLLIETVRNCYGIAAGAEISIEMDPGTFDEARLEAFLALGITRVSMGVQSFDAGLLEACGRAHSLADVYQAVELLRKAKVD---NFSIDLMSGLPKQTVEQWEHTLSEAIATGAAHISVYDLQVEAGTPFGRWFS---------------------------------PGEAPLPEDETCADMYRTASGVLGQAGYDHYEISNYARPGFQSRHNRAYWENVPFLAFGNGAASFVDGYRFSRPRGLPEYGQWVGELEEEGWDKATGAPRRAACEEVLPGGGGMGDGAGAEESRPSREALERDALLDDVMLGFRLKEGLDLRVVASKYG 442          
BLAST of NO27G01310 vs. NCBI_GenBank
Match: WP_029637908.1 (coproporphyrinogen III oxidase family protein [[Scytonema hofmanni] UTEX B 1581])

HSP 1 Score: 275.8 bits (704), Expect = 3.300e-70
Identity = 186/536 (34.70%), Postives = 247/536 (46.08%), Query Frame = 0
Query:   63 LPRALYVHLPFCRRRCFYCDFPIKVVGD---GATAADKYSREYVQLVLREM--KAAFG---RTVREGGREERGGHWVEGVPWSLSELGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLLRLLLKEIEDLFGVSDGAEVSMEMDPGTFDEERLEAFLACGINRVSVGVQSFNQTLLSAAGRAHNRDEVRAALDLLRKPRKRARLNFSLDLISGLPFQSLEQWEESLREAIAVCPPHISLYDLQVEPGTAFGRWYGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTASMYVRASALLQEAGYDHYEVSNYAKPGFQCRHNRVYWEGVPFLALGMGAASYLDWHRFSRPRSLFNYTMWVHELEQEGWRKASGLEEAQKEMSKLQWQLDRLEDLLMVGLRLKEGVELYTLAQQTGMEGGWERGRAAQVVLACEQAVERFISMGAVXXXXXXXXXXXXXXXVVLTDPMGFLLSNEIIAEIF 591
            +P + YVH+PFCRRRCFYCDFP+ VVGD   G T+       YV +++ E+   A FG   +T+  GG          G P  LS                                                                              LR +L+ +E  FG+S GAE+SMEMDPGTFD E L+ +   G+NRVS+GVQ+F   LL  AGR+HN  ++ AA+DL+R+ R      FS+DLISGLP Q+L++W+ SL +A+A+ P HIS+YDL +EPGTAFGR+Y                                            +T  MY  A  +L  AGY+HYE+SNYA+PG QCRHNRVYWE  P+   GMGAASYL+  RF+RPR    Y  WV         +  GL +      +     + L D LM+GLRL EGV L  L  Q G E      +  ++    +   E+                      + L+DP GFL SN ++AE+F
Sbjct:   10 MPSSAYVHIPFCRRRCFYCDFPVSVVGDRLRGETSVG--ISHYVDVLIAEIAATATFGLPLKTIFFGG----------GTPSLLS---------------------------------------------------------------------------IEQLRRILEALEQRFGISPGAEISMEMDPGTFDLEHLQGYCRVGVNRVSLGVQAFESELLQVAGRSHNITDIFAAVDLIRQVRVP---EFSIDLISGLPHQTLDRWQYSLEKAVAIAPTHISIYDLTIEPGTAFGRFY---------------------------------KPGDQPLPTDETTVQMYRLAQQILTMAGYEHYEISNYAQPGHQCRHNRVYWENRPYYGFGMGAASYLEGKRFTRPRKTKEYYSWV---------ETGGLIDCDVTPRE-----EILLDTLMLGLRLAEGVSLDALTAQFGEE------KVKEIYKCLQPYFEK-------------HWVEVVEGRLKLSDPDGFLFSNVVLAELF 389          
BLAST of NO27G01310 vs. NCBI_GenBank
Match: CEM38763.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 273.5 bits (698), Expect = 1.600e-69
Identity = 210/640 (32.81%), Postives = 287/640 (44.84%), Query Frame = 0
Query:   14 LLFLPVFLLLLRPLLPLAFLPSPPPVQHHRVVSLNLYATPS---APTPSTPLLPRALYVHLPFCRRRCFYCDFPIKVVGDGATAADKYSREYVQLVLREMKAAFGRTVREGGREERGGHWVEGVP-----------WSLSELGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLLRLLLKEIEDLFG-VSDGAEVSMEMDPGTFDEERLEAFLACG-INRVSVGVQSFNQTLLSAAGRAHN-RDEVRAALDLLRKPRKRARLNFSLDLISGLPFQSLEQWEESLREAIAVCPPHISLYDLQVEPGTAFGRWYGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTASMYVRASALLQEAGYDHYEVSNYAKPGFQCRHNRVYWEGVPFLALGMGAASYLDWHRFSRPRSLFNYTMWVHELEQEGWRKASG-----------------------LEEAQKEMSKLQWQLDRLEDLLMVGLRLKEGVELYTLAQQTGMEGGWERGRAAQVVLACEQAVERFI-------------SMGAVXXXXXXXXXXXXXXXVVLTDPMGFLLSNEIIAEIFAAVEILFEGW 601
            LL +   L+     LP   +P+PP        S  L A  S   +  PS+   PR++YVH+PFCRRRC+YCDFPI VVGD A A  + +  Y  ++ REM+A    T       + GG  V   P           W  +E  G                                                                         ++  ++ +IE LFG +S G E+SMEMDPG+FD+++L +FL  G +NRVS+GVQSF+   L   GRAH+ RD  RA  DL    R     N+S+DLI GLP  ++++WE ++REAI V  PH+S+YDLQVE G+ FGRW                                             ++A MY  AS LL++AGY HYEVSNYAK G QCRHN  YWE VPF A G GAAS+   +RFSRPR L +Y +WV  LE+EG+  A+G                       +++ Q      + + + L D LM+GLRLK G+ L  +A+  G +      RA     A E+ + R                + +                V LTDP GFLLSN++I+ +FA ++ +  GW
Sbjct:    9 LLLITSRLIASVSALPSFIIPTPPLRHGKSRPSARLGAQQSRLHSLRPSSFTQPRSVYVHIPFCRRRCYYCDFPISVVGDSARAQQQQAESYYGVLKREMEAT-ASTWCPPSSADSGGQRVMAEPSIVMDSVWRDEWERAEASG-----------------------------------------------------ERGVSTVFFGGGTPSLMPPEVIGRIVDDIERLFGPLSAGCEISMEMDPGSFDQDKLRSFLTHGRVNRVSLGVQSFSDKTLQRIGRAHSARDVYRAIEDL----RACGVDNWSVDLIGGLPELTVDEWEGTVREAIDVGAPHLSVYDLQVEEGSFFGRW--------------------------------GYQAGESPLPTEDASAQMYRSASRLLRDAGYVHYEVSNYAKEGHQCRHNMAYWENVPFFAFGNGAASFTSLYRFSRPRRLQDYRVWVDRLEREGFLHAAGFHSLAELWDESIHRYEKTHEGTHVDDGQHAQMYSELRRECLSDGLMLGLRLKSGISLSRIAKAHGTDAVNGILRAIDQSSAIERGLVRVFCRPRCDSDSGDEKDLTSGGDALRVMGEGGREVGVCLTDPEGFLLSNDVISSMFACIDQM--GW 556          
BLAST of NO27G01310 vs. NCBI_GenBank
Match: BAY10885.1 (putative oxygen-independent coproporphyrinogen III oxidase [Calothrix sp. NIES-2098])

HSP 1 Score: 271.6 bits (693), Expect = 6.200e-69
Identity = 184/537 (34.26%), Postives = 253/537 (47.11%), Query Frame = 0
Query:   63 LPRALYVHLPFCRRRCFYCDFPIKVVGD---GATAADKYSREYVQLVLREMKAA--FG---RTVREGGREERGGHWVEGVPWSLSELGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLLRLLLKEIEDLFGVSDGAEVSMEMDPGTFDEERLEAFLACGINRVSVGVQSFNQTLLSAAGRAHNRDEVRAALDLLRKPRKRARLNFSLDLISGLPFQSLEQWEESLREAIAVCPPHISLYDLQVEPGTAFGRWYGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTASMYVRASALLQEAGYDHYEVSNYAKPGFQCRHNRVYWEGVPFLALGMGAASYLDWHRFSRPRSLFNYTMWVHELEQEGWRKASGLEEAQKEMSKLQWQLDRLEDLLMVGLRLKEGVELYTLAQQTGMEGGWERGRAAQVVLACEQAVERFISMGAVXXXXXXXXXXXXXXXVVLTDPMGFLLSNEIIAEIFA 592
            +PR+ YVH+PFCRRRCFYCDFPI VVGD   G T+      +YV+L+ +E+     FG   +T+  GG          G P  LS                                                                              L+ +LK +E  FG+  GAE+SMEMDPGTFD   +  + + G+NRVS+GVQ+F + LL  AGR+H+  ++ AA++L+RK        FSLDLISGLP QSL+ W++SL +A+ + P HIS+YDL +EPGTAFGR+Y                                            +T  MY  A  +L  AGY+HYE+SNYA+PG QC+HNRVYWE  P+   GMGAASY++  RF+RPR    Y  WV         KA  + + +   +      + L + LM+GLRL EGV L TLA + G           + V    + ++ +++ G V               + L+DP GFL SN ++AE+FA
Sbjct:   14 IPRSAYVHIPFCRRRCFYCDFPISVVGDRLRGETSGT--ISQYVELLTQEISITPIFGQPLKTIFFGG----------GTPSLLS---------------------------------------------------------------------------IDQLQKILKTLEKRFGIVPGAEISMEMDPGTFDLAHIAGYRSLGVNRVSLGVQAFQEELLKVAGRSHSTADIFAAVELVRKVEIP---EFSLDLISGLPHQSLDCWQDSLAQAVGISPTHISIYDLTIEPGTAFGRYY---------------------------------KPGDLPLPTDETTVKMYQMAQQVLTGAGYEHYEISNYAQPGHQCQHNRVYWENRPYYGFGMGAASYIEGKRFTRPRKTKEYYQWV---------KAGCVVDCEVTPAD-----EVLLETLMLGLRLAEGVNLSTLAAEFG----------EKKVEEIHKFLQPYLAKGWV---------EIVEGQLRLSDPQGFLFSNVVLAELFA 394          
BLAST of NO27G01310 vs. NCBI_GenBank
Match: WP_096595323.1 (coproporphyrinogen III oxidase family protein [Calothrix sp. NIES-2098])

HSP 1 Score: 271.6 bits (693), Expect = 6.200e-69
Identity = 184/537 (34.26%), Postives = 253/537 (47.11%), Query Frame = 0
Query:   63 LPRALYVHLPFCRRRCFYCDFPIKVVGD---GATAADKYSREYVQLVLREMKAA--FG---RTVREGGREERGGHWVEGVPWSLSELGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLLRLLLKEIEDLFGVSDGAEVSMEMDPGTFDEERLEAFLACGINRVSVGVQSFNQTLLSAAGRAHNRDEVRAALDLLRKPRKRARLNFSLDLISGLPFQSLEQWEESLREAIAVCPPHISLYDLQVEPGTAFGRWYGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTASMYVRASALLQEAGYDHYEVSNYAKPGFQCRHNRVYWEGVPFLALGMGAASYLDWHRFSRPRSLFNYTMWVHELEQEGWRKASGLEEAQKEMSKLQWQLDRLEDLLMVGLRLKEGVELYTLAQQTGMEGGWERGRAAQVVLACEQAVERFISMGAVXXXXXXXXXXXXXXXVVLTDPMGFLLSNEIIAEIFA 592
            +PR+ YVH+PFCRRRCFYCDFPI VVGD   G T+      +YV+L+ +E+     FG   +T+  GG          G P  LS                                                                              L+ +LK +E  FG+  GAE+SMEMDPGTFD   +  + + G+NRVS+GVQ+F + LL  AGR+H+  ++ AA++L+RK        FSLDLISGLP QSL+ W++SL +A+ + P HIS+YDL +EPGTAFGR+Y                                            +T  MY  A  +L  AGY+HYE+SNYA+PG QC+HNRVYWE  P+   GMGAASY++  RF+RPR    Y  WV         KA  + + +   +      + L + LM+GLRL EGV L TLA + G           + V    + ++ +++ G V               + L+DP GFL SN ++AE+FA
Sbjct:   10 IPRSAYVHIPFCRRRCFYCDFPISVVGDRLRGETSGT--ISQYVELLTQEISITPIFGQPLKTIFFGG----------GTPSLLS---------------------------------------------------------------------------IDQLQKILKTLEKRFGIVPGAEISMEMDPGTFDLAHIAGYRSLGVNRVSLGVQAFQEELLKVAGRSHSTADIFAAVELVRKVEIP---EFSLDLISGLPHQSLDCWQDSLAQAVGISPTHISIYDLTIEPGTAFGRYY---------------------------------KPGDLPLPTDETTVKMYQMAQQVLTGAGYEHYEISNYAQPGHQCQHNRVYWENRPYYGFGMGAASYIEGKRFTRPRKTKEYYQWV---------KAGCVVDCEVTPAD-----EVLLETLMLGLRLAEGVNLSTLAAEFG----------EKKVEEIHKFLQPYLAKGWV---------EIVEGQLRLSDPQGFLFSNVVLAELFA 390          
BLAST of NO27G01310 vs. NCBI_GenBank
Match: WP_015154878.1 (coproporphyrinogen III oxidase family protein [Chroococcidiopsis thermalis] >AFY88331.1 coproporphyrinogen III oxidase, anaerobic [Chroococcidiopsis thermalis PCC 7203])

HSP 1 Score: 270.4 bits (690), Expect = 1.400e-68
Identity = 187/555 (33.69%), Postives = 254/555 (45.77%), Query Frame = 0
Query:   63 LPRALYVHLPFCRRRCFYCDFPIKVVGD---GATAADKYSREYVQLVLREMKA--AFGR---TVREGGREERGGHWVEGVPWSLSELGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLLRLLLKEIEDLFGVSDGAEVSMEMDPGTFDEERLEAFLACGINRVSVGVQSFNQTLLSAAGRAHNRDEVRAALDLLRKPRKRARLNFSLDLISGLPFQSLEQWEESLREAIAVCPPHISLYDLQVEPGTAFGRWYGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTASMYVRASALLQEAGYDHYEVSNYAKPGFQCRHNRVYWEGVPFLALGMGAASYLDWHRFSRPRSLFNYTMWVHELEQEGWRKASGLEEAQKEMSKLQWQLDRLEDLLMVGLRLKEGVELYTLAQ-------------QTGMEGGWERGRAAQVVLACEQAVERFISMG--AVXXXXXXXXXXXXXXXVVLTDPMGFLLSNEIIAEIFAAVE 595
            +P A Y+H+PFCRRRC+YCDFPI VVGD   G T+       YVQ++ +E+ A  A G+   T+  GG          G P  LS                                                                              L  +L  +E  FG+S  AE+SME+DPGTF   +L+A+L+ G+NR S+GVQ+F   LL A GR+H+ +++  A++L R+ + +   NFSLDLISGLP Q+LEQW+ESL +A+A+ P HIS+YDL +EPGT FGR+Y                                             T  MY  A   L +AGYDHYE+SNYA+P +QCRHNR YWE  P+   GMGAASY +  RF+RPR    Y+ WV     E +  A G+ +  +   +     + L D+LM+GLRLKEGV L  L+Q             Q     GW        +       + F + G   V               + LTDP GFL SN ++A++F  +E
Sbjct:   21 IPSAAYIHIPFCRRRCYYCDFPISVVGDRLRGETSGT--ISHYVQILSQEIAATPALGKPLETIFFGG----------GTPSLLSS---------------------------------------------------------------------------SQLAQILARLERQFGISAQAEISMEIDPGTFTLAQLQAYLSAGVNRFSLGVQAFQSELLQACGRSHDLNDIWQAVELFRQAKVQ---NFSLDLISGLPRQTLEQWQESLLKAVAIAPNHISIYDLTIEPGTVFGRYYQSGASPLPSDEL---------------------------------TVQMYCLAQQTLTKAGYDHYEISNYAQPNYQCRHNRTYWENRPYYGFGMGAASYTNNQRFTRPRKTKEYSDWV-----ENFIAAGGVLDCPQTPPE-----EVLLDILMLGLRLKEGVSLSALSQFGDDKIQQIWTCLQPYQHQGW--------IAMTGAIAQPFYAKGWNKVIGNMFYGENLVGDWRLRLTDPQGFLFSNVVLADLFEKLE 434          
BLAST of NO27G01310 vs. NCBI_GenBank
Match: WP_041463130.1 (MULTISPECIES: coproporphyrinogen III oxidase family protein [Cyanobacteria] >PSB48691.1 coproporphyrinogen III oxidase family protein [Cyanosarcina cf. burmensis CCALA 770] >PSB64298.1 coproporphyrinogen III oxidase family protein [Chroococcidiopsis cubana CCALA 043])

HSP 1 Score: 270.4 bits (690), Expect = 1.400e-68
Identity = 187/555 (33.69%), Postives = 254/555 (45.77%), Query Frame = 0
Query:   63 LPRALYVHLPFCRRRCFYCDFPIKVVGD---GATAADKYSREYVQLVLREMKA--AFGR---TVREGGREERGGHWVEGVPWSLSELGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLLRLLLKEIEDLFGVSDGAEVSMEMDPGTFDEERLEAFLACGINRVSVGVQSFNQTLLSAAGRAHNRDEVRAALDLLRKPRKRARLNFSLDLISGLPFQSLEQWEESLREAIAVCPPHISLYDLQVEPGTAFGRWYGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTASMYVRASALLQEAGYDHYEVSNYAKPGFQCRHNRVYWEGVPFLALGMGAASYLDWHRFSRPRSLFNYTMWVHELEQEGWRKASGLEEAQKEMSKLQWQLDRLEDLLMVGLRLKEGVELYTLAQ-------------QTGMEGGWERGRAAQVVLACEQAVERFISMG--AVXXXXXXXXXXXXXXXVVLTDPMGFLLSNEIIAEIFAAVE 595
            +P A Y+H+PFCRRRC+YCDFPI VVGD   G T+       YVQ++ +E+ A  A G+   T+  GG          G P  LS                                                                              L  +L  +E  FG+S  AE+SME+DPGTF   +L+A+L+ G+NR S+GVQ+F   LL A GR+H+ +++  A++L R+ + +   NFSLDLISGLP Q+LEQW+ESL +A+A+ P HIS+YDL +EPGT FGR+Y                                             T  MY  A   L +AGYDHYE+SNYA+P +QCRHNR YWE  P+   GMGAASY +  RF+RPR    Y+ WV     E +  A G+ +  +   +     + L D+LM+GLRLKEGV L  L+Q             Q     GW        +       + F + G   V               + LTDP GFL SN ++A++F  +E
Sbjct:   15 IPSAAYIHIPFCRRRCYYCDFPISVVGDRLRGETSGT--ISHYVQILSQEIAATPALGKPLETIFFGG----------GTPSLLSS---------------------------------------------------------------------------SQLAQILARLERQFGISAQAEISMEIDPGTFTLAQLQAYLSAGVNRFSLGVQAFQSELLQACGRSHDLNDIWQAVELFRQAKVQ---NFSLDLISGLPRQTLEQWQESLLKAVAIAPNHISIYDLTIEPGTVFGRYYQSGASPLPSDEL---------------------------------TVQMYCLAQQTLTKAGYDHYEISNYAQPNYQCRHNRTYWENRPYYGFGMGAASYTNNQRFTRPRKTKEYSDWV-----ENFIAAGGVLDCPQTPPE-----EVLLDILMLGLRLKEGVSLSALSQFGDDKIQQIWTCLQPYQHQGW--------IAMTGAIAQPFYAKGWNKVIGNMFYGENLVGDWRLRLTDPQGFLFSNVVLADLFEKLE 428          
BLAST of NO27G01310 vs. NCBI_GenBank
Match: BAZ27795.1 (putative oxygen-independent coproporphyrinogen III oxidase [Cylindrospermum sp. NIES-4074])

HSP 1 Score: 268.5 bits (685), Expect = 5.300e-68
Identity = 178/537 (33.15%), Postives = 250/537 (46.55%), Query Frame = 0
Query:   63 LPRALYVHLPFCRRRCFYCDFPIKVVGD---GATAADKYSREYVQLVLRE--MKAAFGR---TVREGGREERGGHWVEGVPWSLSELGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLLRLLLKEIEDLFGVSDGAEVSMEMDPGTFDEERLEAFLACGINRVSVGVQSFNQTLLSAAGRAHNRDEVRAALDLLRKPRKRARLNFSLDLISGLPFQSLEQWEESLREAIAVCPPHISLYDLQVEPGTAFGRWYGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTASMYVRASALLQEAGYDHYEVSNYAKPGFQCRHNRVYWEGVPFLALGMGAASYLDWHRFSRPRSLFNYTMWVHELEQEGWRKASGLEEAQKEMSKLQWQLDRLEDLLMVGLRLKEGVELYTLAQQTGMEGGWERGRAAQVVLACEQAVERFISMGAVXXXXXXXXXXXXXXXVVLTDPMGFLLSNEIIAEIFA 592
            +P + Y+H+PFCRRRCFYCDFP+ VVGD   G T+      +Y++++ +E  M   FG+   T+  GG          G P  LS                                                                              L+ +L+ +E+ FG++ GAE+SME+DPGTFD   +  +L+ G+NRVS+GVQ+F + LL  AGR+H+  ++ AA++L+R+        FSLDLISGLP QS++QW++SL +A+A  P HIS+YDL +EPGTAFGR+Y                                            +T  MY     +L  AGY HYE+SNYA+PG QCRHNRVYWE  P+   GMGAASYL   RF+RPR    Y+ WV         +A  + + +   +      + L + LM+GLRL EGV L  L+ Q G             V    Q ++ +   G V               + L+DP GFL SN ++A++FA
Sbjct:   10 IPSSAYIHIPFCRRRCFYCDFPVSVVGDRLRGETSGT--IGQYIEVLCQEIAMSPVFGQSLETIFFGG----------GTPSLLSTA---------------------------------------------------------------------------QLQRILQALEERFGIASGAEISMEVDPGTFDLAHITGYLSAGVNRVSLGVQAFQEELLKTAGRSHSLVDIFAAIELIRQVEVP---EFSLDLISGLPHQSIDQWQDSLAQAVAAAPTHISIYDLTIEPGTAFGRYY---------------------------------KPGDNPLPTDETTVKMYQMGQQVLTGAGYQHYEISNYAQPGHQCRHNRVYWENRPYYGFGMGAASYLQGKRFTRPRKTKEYSQWV---------QAGAVIDCEVTPAD-----EILLETLMLGLRLAEGVSLAVLSAQFG----------EAKVEEIHQCLQPYFEKGWV---------EVVGGRLRLSDPQGFLFSNVVLAKLFA 390          
BLAST of NO27G01310 vs. NCBI_GenBank
Match: WP_073635344.1 (coproporphyrinogen III oxidase family protein [Scytonema sp. HK-05] >OKH52063.1 coproporphyrinogen III oxidase [Scytonema sp. HK-05] >BAY49830.1 putative oxygen-independent coproporphyrinogen III oxidase [Scytonema sp. HK-05])

HSP 1 Score: 268.1 bits (684), Expect = 6.900e-68
Identity = 182/536 (33.96%), Postives = 250/536 (46.64%), Query Frame = 0
Query:   63 LPRALYVHLPFCRRRCFYCDFPIKVVGD---GATAADKYSREYVQLVLRE--MKAAFGR---TVREGGREERGGHWVEGVPWSLSELGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLLRLLLKEIEDLFGVSDGAEVSMEMDPGTFDEERLEAFLACGINRVSVGVQSFNQTLLSAAGRAHNRDEVRAALDLLRKPRKRARLNFSLDLISGLPFQSLEQWEESLREAIAVCPPHISLYDLQVEPGTAFGRWYGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTASMYVRASALLQEAGYDHYEVSNYAKPGFQCRHNRVYWEGVPFLALGMGAASYLDWHRFSRPRSLFNYTMWVHELEQEGWRKASGLEEAQKEMSKLQWQLDRLEDLLMVGLRLKEGVELYTLAQQTGMEGGWERGRAAQVVLACEQAVERFISMGAVXXXXXXXXXXXXXXXVVLTDPMGFLLSNEIIAEIF 591
            +P + Y+H+PFCRRRCFYCDFP+ VVGD   G T+      +YV ++ +E  +  A G+   T+  GG          G P  LS                                                                              L+ +L  ++  FGVS G E+SME+DPGTFD   L+ + + G+NR+S+GVQ+F + LL   GR+H+  ++ AA+DL+R+ R     +FSLDLISGLP Q+L++W+ESL +A+A+ P HIS+YDL +EPGTAFGR+Y                                            +T  MY  A  +L  AGY+HYE+SNYA+PG QCRHNRVYWE  P+ A GMGAASY++  RF+RPR    Y  WV    Q+G       E    +        + L + LM+GLRL EGV L  LA++ G E           V    Q ++ +   G V               + LTDP GFL SN ++A +F
Sbjct:   10 IPSSAYIHIPFCRRRCFYCDFPVSVVGDRLRGETSGT--ISQYVDVLCQEIAITPALGQPLTTIFFGG----------GTPSLLS---------------------------------------------------------------------------TEQLQRILATLDKQFGVSPGVEISMEIDPGTFDSVHLQGYRSAGVNRISLGVQAFQENLLQVCGRSHSVSDIFAAVDLIRQVRIP---DFSLDLISGLPHQTLDRWQESLEKAVAIAPTHISIYDLTIEPGTAFGRYY---------------------------------KPGDQPLPTDETTVKMYRMAQQILTSAGYEHYEISNYAQPGHQCRHNRVYWENRPYYAFGMGAASYVEGKRFNRPRKTKEYYQWV----QDG--AVIDCEVTSPD--------EVLLETLMLGLRLAEGVSLGVLAERFGEE----------KVEEIHQCLQPYYEKGWV---------EVVQERLRLTDPDGFLFSNVVLAGLF 389          
BLAST of NO27G01310 vs. NCBI_GenBank
Match: WP_096731699.1 (coproporphyrinogen III oxidase family protein [Nostoc carneum] >BAY34831.1 putative oxygen-independent coproporphyrinogen III oxidase [Nostoc carneum NIES-2107])

HSP 1 Score: 268.1 bits (684), Expect = 6.900e-68
Identity = 177/534 (33.15%), Postives = 253/534 (47.38%), Query Frame = 0
Query:   64 PRALYVHLPFCRRRCFYCDFPIKVVGDGATAADKYS-REYVQLVLREMKAA--FG---RTVREGGREERGGHWVEGVPWSLSELGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLLRLLLKEIEDLFGVSDGAEVSMEMDPGTFDEERLEAFLACGINRVSVGVQSFNQTLLSAAGRAHNRDEVRAALDLLRKPRKRARLNFSLDLISGLPFQSLEQWEESLREAIAVCPPHISLYDLQVEPGTAFGRWYGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTASMYVRASALLQEAGYDHYEVSNYAKPGFQCRHNRVYWEGVPFLALGMGAASYLDWHRFSRPRSLFNYTMWVHELEQEGWRKASGLEEAQKEMSKLQWQLDRLEDLLMVGLRLKEGVELYTLAQQTGMEGGWERGRAAQVVLACEQAVERFISMGAVXXXXXXXXXXXXXXXVVLTDPMGFLLSNEIIAEIFA 592
            P + YVH+PFCRRRCFYCDFPI VVGD        +  +YV+++ +E+  A  FG   +T+  GG          G P  LS                                                                              L+ +L  +E  FG+  GAE+SME+DPGTFD   +  + + G+NRVS+G+Q+F + LL  AGR+H+  ++ AA++L+RK        FSLDLISGLP QSL+ W++SL +A+A+ P HIS+YDL +EPGTAFGR+Y                                            +T  MY  A  +L +AGY+HYE+SNYA+PG QC+HNRVYWE  P+   GMGAASY++  RF+RPR    Y  WV         KA+ + + +     +    + L + LM+GLRL EGV L  LA+  G +           + A ++ ++ +++ G V               + LTDP GFL SN ++A++F+
Sbjct:   11 PTSAYVHIPFCRRRCFYCDFPISVVGDRLRGETSNAISQYVEVLTQEIATAPTFGESLKTIFFGG----------GTPSLLS---------------------------------------------------------------------------IEQLQQILTALEQHFGILPGAEISMEIDPGTFDLAHIAGYRSLGVNRVSLGIQAFQEELLKLAGRSHSIADIFAAVELVRKVEIP---EFSLDLISGLPHQSLDHWQDSLAKAVAIAPTHISIYDLTIEPGTAFGRYY---------------------------------EPGANPLPTDETTVKMYQMAQQVLTDAGYEHYEISNYAQPGHQCQHNRVYWENRPYYGFGMGAASYIEGKRFTRPRKTKEYYAWV---------KAACVVDCE-----ITPPNEVLLETLMLGLRLAEGVSLAALAEDFGED----------KLEAIQKFIQPYLTKGWV---------EVINGKLCLTDPQGFLFSNVVLADLFS 390          
The following BLAST results are available for this feature:
BLAST of NO27G01310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ30711.11.200e-8039.60coproporphyrinogen III oxidase [Ectocarpus silicul... [more]
WP_029637908.13.300e-7034.70coproporphyrinogen III oxidase family protein [[Sc... [more]
CEM38763.11.600e-6932.81unnamed protein product [Vitrella brassicaformis C... [more]
BAY10885.16.200e-6934.26putative oxygen-independent coproporphyrinogen III... [more]
WP_096595323.16.200e-6934.26coproporphyrinogen III oxidase family protein [Cal... [more]
WP_015154878.11.400e-6833.69coproporphyrinogen III oxidase family protein [Chr... [more]
WP_041463130.11.400e-6833.69MULTISPECIES: coproporphyrinogen III oxidase famil... [more]
BAZ27795.15.300e-6833.15putative oxygen-independent coproporphyrinogen III... [more]
WP_073635344.16.900e-6833.96coproporphyrinogen III oxidase family protein [Scy... [more]
WP_096731699.16.900e-6833.15coproporphyrinogen III oxidase family protein [Nos... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR044ncniR044Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR093ngnoR093Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO27G01310.1NO27G01310.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|603738gene_8722Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_102067g1gene9445Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO27G01310.1NO27G01310.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO27G01310 ID=NO27G01310|Name=NO27G01310|organism=Nannochloropsis oceanica|type=gene|length=3082bp
GGGGGAGGTCGCCTTCAGATAGCGTGAGGTTTTCGTGGGGCCGACACCAA
GGCGTTTCCAGAGTCGCCCCTGATTGTTAAGTCTTGTCATCTACCTGACT
ACAGGCACTTTTATTCCTGTTTACGCCCAAGGCACCCATGAGAATGGGGA
ACAAGAGAGGGAAATGCGGGTAGCCACCCGGCATGGCCCACGGGCGCGCC
TCGGCTTGGGCCGCCGTTGTGTTGCTTCTTTGCCTTCTCCCCATCGGTGT
CCTCGTTTCACATATCTTCTCCTACGACACACGAAATAAGACATCGTAAT
TACCAATAGCAGGATGACAAGTAGGACAAAACCCAGAAGAAGATCATTCC
TGCTCCTTTTCCTTCCTGTCTTTCTCCTGCTCCTCCGTCCCCTCCTTCCC
CTCGCCTTCCTTCCTTCCCCACCCCCCGTCCAGCACCACCGCGTCGTATC
CCTCAACCTCTACGCTACGCCTTCGGCTCCAACTCCTTCCACGCCCTTGC
TCCCTCGAGCCTTGTACGTGCACCTGCCCTTTTGTCGTCGTCGTTGCTTT
TATTGCGACTTTCCTATCAAAGTCGTAGGGGACGGCGCGACGGCTGCTGA
TAAATACAGCCGTGAGTACGTCCAGCTGGTGCTACGAGAAATGAAGGCCG
CTTTTGGAAGGACGGTGAGGGAGGGAGGGAGAGAGGAGAGGGGGGGACAT
TGGGTAGAAGGCGTGCCATGGTCGTTGTCGGAGCTTGGCGGGTTGACCTC
TTCTGCCTCCTCTTCCACCTCCTCTTCCACGTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCATCATCATCATCATCATCATCATCATCTCCCTCCTCC
TCCTCCTCCTCCTCCTCCCCAAGCACCACCACTGCGGGCGTCATCAAAGC
CAGTGGGGGCCTGACCAGTATCTTCTTCGGTGGCGGCACTCCCTCCCTCA
CCCCGCCCCACCTCCTTCGCCTTCTCCTGAAAGAGATCGAGGACTTGTTC
GGGGTGAGCGATGGGGCGGAAGTGTCCATGGAGATGGACCCGGGCACTTT
CGACGAGGAGAGGCTGGAGGCCTTCCTGGCCTGTGgtgggtgaggagggg
tagcgggagggagggggaagtactacaacaagcattgttgcagggaggga
aagaagaaaggaggaggaatgaagggagagagcgagcgaggaaggaatgg
aagaaaaatgctcctctgactgactgcctctatgcgcttgctgatttacg
acgacgacagGGATCAACCGGGTGAGCGTGGGTGTACAATCCTTCAACCA
AACTCTCCTCTCCGCCGCTGGGCGCGCGCACAAgtacgctacgcttcctc
ccccctagccctcttccctccctaccttattttcctctccgcctaccctt
ccttaccctcacccttaacctcaccgtcatcctcaccccctccctccact
atccacccccccctctccccagCCGTGACGAGGTCCGCGCTGCCCTCGAT
CTCCTGAGAAAGCCGAGGAAGAGGGCCCGCCTCAACTTCAGCCTCGATCT
GATCAGCGGTCTCCCTTTTCAGgtaggggggtggggagggagaggaggag
ggagaaatggaaggagggtacatttgaacacgacaaaaacgcgtttttct
gacgaggacactccctccctccctccctccctccctctctcagTCCCTGG
AGCAGTGGGAAGAATCTCTCCGCGAGGCCATCGCTGTCTGTCCTCCTCAC
ATCTCTCTCTACGACCTCCAAGTCGAGCCAGGAACGgtggggagggaggg
agagagtgagggagggaggtcaggggatcctgctggccgactcaggtggt
gtttaacaagtctcctccctcctctccctccttcctccttcccccccctc
ctttctcttgcagGCCTTTGGTCGCTGGTACGGGAAGGGAGAAGGCGAGG
GCAACAGTACGCACGAAGCTTCCTCCTCTTTTTCTTCCACTTCCACTTCT
TCCTCCTCCTCTTCCTCCCTCCCTCCTTCTCTTTCCTCTCCCTCTCCTCT
GCCTCCCGAGGAGTCTACCGCGTCCATGTATGTCCGAGCCTCGGCCTTGC
TTCAAGAGGCGGGCTATGACCATTATGAGgtggggagagaggggggaggg
tggaggcgattgtacttctctttaaccattttcagatcgagcaatcaatg
aaccccccccccgtccctccctctctcccttcccaagGTCTCCAACTACG
CCAAGCCCGGCTTTCAATGTCGTCACAATAGGGTATATTGGGAAGGCGTG
CCTTTCCTGGCCCTGGGCATGGGAGCGGCGAGCTACCTAGgtaaaaaggg
gggaagggagggagggagggaatggggaaggaagagacagcacagctcat
cgatcgaagccttctcaacgctctgcctttctccctccaagACTGGCACC
GCTTCAGCCGCCCTCGGTCTCTATTCAATTACACCATGTGGGTGCACGAG
CTAGAGCAAGAAGGGTGGAGGAAAGCCAGCGGCCTGGAGGAGGCGCAGAA
GGAGATGTCGAAATTGCAATGGCAGTTGGACAGgtaggcttgctcccatc
cctcccttcttccaagccatcttatcctcatcgcggtcggtggtacacgg
ataggactcgtgagtggttgtcaacttctttctcctttccctccctccct
ccctcccttcttttgcagACTGGAGGACCTGCTTATGGTGGGCCTCCGTC
TCAAGGAAGGAGTGGAGCTTTATACCCTCGCACAGCAGACAGGGATGGAG
GGAGGTTGGGAGAGGGGGAGAGCCGCACAAGTCGTTTTGGCATGCGAACA
GGCCGTGGAACGATTTATCTCCATGGGCGCTGTTGTACTGGAGAAAGGAG
GGGGAGGGGGAGGAAGCAGAAGGACAAGGGTAGTGTTGACGGATCCGATG
GGATTTTTGCTTTCAAACGAGATTATTGCCGAGATCTTCGCAGCGGTTGA
GATATTGTTTGAGGGATGGGAGGAGGGGGATAAAGGAGGAACGGAAGGAG
GGAGGAAAGAAAGTACAACAACCACCAGGTAA
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protein sequence of NO27G01310.1

>NO27G01310.1-protein ID=NO27G01310.1-protein|Name=NO27G01310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=621bp
MTSRTKPRRRSFLLLFLPVFLLLLRPLLPLAFLPSPPPVQHHRVVSLNLY
ATPSAPTPSTPLLPRALYVHLPFCRRRCFYCDFPIKVVGDGATAADKYSR
EYVQLVLREMKAAFGRTVREGGREERGGHWVEGVPWSLSELGGLTSSASS
STSSSTSSSSSSSSSSSSSSSSSSSSPSSSSSSSSPSTTTAGVIKASGGL
TSIFFGGGTPSLTPPHLLRLLLKEIEDLFGVSDGAEVSMEMDPGTFDEER
LEAFLACGINRVSVGVQSFNQTLLSAAGRAHNRDEVRAALDLLRKPRKRA
RLNFSLDLISGLPFQSLEQWEESLREAIAVCPPHISLYDLQVEPGTAFGR
WYGKGEGEGNSTHEASSSFSSTSTSSSSSSSLPPSLSSPSPLPPEESTAS
MYVRASALLQEAGYDHYEVSNYAKPGFQCRHNRVYWEGVPFLALGMGAAS
YLDWHRFSRPRSLFNYTMWVHELEQEGWRKASGLEEAQKEMSKLQWQLDR
LEDLLMVGLRLKEGVELYTLAQQTGMEGGWERGRAAQVVLACEQAVERFI
SMGAVVLEKGGGGGGSRRTRVVLTDPMGFLLSNEIIAEIFAAVEILFEGW
EEGDKGGTEGGRKESTTTTR*
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Synonyms
Publications