NO27G01290, NO27G01290 (gene) Nannochloropsis oceanica

Overview
NameNO27G01290
Unique NameNO27G01290
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2638
Alignment locationchr27:416418..419055 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr27genomechr27:416418..419055 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO27G01290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR044ncniR044Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR093ngnoR093Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO27G01290.1NO27G01290.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO27G01290.1NO27G01290.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO27G01290 ID=NO27G01290|Name=NO27G01290|organism=Nannochloropsis oceanica|type=gene|length=2638bp
ATGGACCCCACCGgtgatatgtatattgcaatgctatgacctactgtctt
ttttgggcctgcttgccgtgtcagggctaagtcatcgcagtctggggctg
ccaaacttgatcatccatcatcctggctggtgtctcggctctcctgcagt
gctacgtgaggagacagactcctagctgtcaagccgtcttctcacttcta
ccctatttgtgacccacccccacagtcgcacaattaggtgaaggcaagca
gcctactgtcacccacaagcctgttgccagcacctcaaatgcggatggga
agtctctaaactggctacagCGCTTCAGCGCGCTTTCTTGAATCTCCCCA
ATCCTACCTCCATCTTAATAGCGgtacgtacagtggtgatccttttacat
atgtcaattgccgccacaaaatagtggttccagcatccaaggttttagtt
ggaaggcgtcgatcgaaagtgctttgcgcttcctccccctctttccctca
tccccctcgctcctcctgtcctcgccgctccacctacagtccttataaca
tttgacggaaaccgccttcgtgccgagtggcatcgtttgccaatgaatta
cagacacttaccatagtataccctttctctttcttctttccattcgtcaa
cagGACACCATGGCTCCCCCCGTCGCCACCGTCGCCGCCACCCCGCTGCT
TCCACACGACAAAGACGCCTTCCCTCCCTCCCTCCCTCCCTCTCCTGTCA
CTGCTGAAGAAGGTTCCCTCTTCATGCCGATCGCCGGCAGCAGCAGCTGC
AGCAGCACACCCAGCAGCAGCGGCACAGCGAGCCTCCTCCTCCCAGCCAC
TATCAACTCCTTCCCCTCGCTCATGGAGCAAGCGAGCACCGTCGAGGGAA
GGCCAGAAGGCGGAAGGGAGGGAAAAGTAGGCGGGCCGCACTTGCAGGCC
TATCCGCGCCTCGATCCCGCGCTTCCGCACAAAGACTTGGGGGACTCTCC
TTCCCGTCTAGCCGCCTCCAAAATTCCCAACCATCAAGGGCCCAAGCTTG
CCCTCCCTCCCTCCCTCCCTCCCCTGACTTTTTCGCCGAGCACGGGAGGG
GGGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGAATTGGGCTGCATGA
TGTATTGGAGGCAGTCATGCGTGGAGGAGGCAATCTTCCTCCAGAGGCCC
CACGAGTGGAGCCACTGgtgagcaaaagcaagggggttgagagcaaatga
gggaaggagggagggagggacgtgaagaggctgctttctttccaatcact
cacctacctatccctcctctgctacctccttccctccatccctcctcccc
tcagCCAGTTGCCATTCACGTGCTCGCGTGCCTCCTCTTCTCCCTCTCCC
TCCTCGTCGCCCTTGTCTGGCTGCGTTTCGAGAAGGACATTTTGGACAGC
CTCGATCTTCCGGGGAGGATGGGAGGGAGGGAGGCAAGCAGGCAGAAGAG
GAGGAGAAGGAAGGGGTCGATGGGTGGGGAGGGGGACGGGGGGGAAGAGA
AAGAGGGGGAGTGTGAGTGGTGTGTACTTTGTCAAAAGGAGAGGGAGGGC
GAGAAAGAGGAGGGGATGAGGAGGGGAAGGGGCGAGGGGGGAGGGATAAA
TGGGGTATGTGCGCTGGAGAAAGTGAGGGAGGGAGGGCTTGGGGAGGGGG
AGACTCCATCTCGAGGTCCACGTGGCTGGGGCACGGAGGCAGGCGGCGGC
AGTAGGGAGAAGGCAATAGGTGCGGCATGCGTCGAGGAGGAGGACGAGGG
CACGGGTGAAGAAAAGGGTCAGCACCAGCACCAGCACCACCAGCACCACC
AGCACCACCAGCACCAGCATGAGTACCAGCACCAGCAGCACCACCAGCAC
CAGCACCACCAGCACCAGCACCAGCACCGGCAGCAACTCACTAACCCCCC
TCCCTCTCACCCGTCCTCCACCTTCCAAACGCCCTCCAAAAATAAAGAAG
CCCTCAGCGGCAATGTCTCGCCCTCCCTCCCTCCTTCCCTCCCTCCTTCC
CTCCCTCCCATGACTCCGTCTTTCTCGGCCTCGGCATCGCTGCCTGACCT
GGCGTCCCCTCCCATGCACCTGCAGCATGCGGCAAGGACCAAGGGAGGGG
GGAAGGGAGAGAGTGAAGGGGCGGGGGGGAGGATCAAGAGTGGGCTGCTT
TTGAGTTCCGTGCCCGCTGTGGTGGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGTGGAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGGCGGG
GGGACGCAGACAGGGGAGAAGGAGGGGACGTAGACGGCAAGAAAGCACTT
TGAAAGAATGGAGAAGGAGGGGGAGGAACGGAGGGAGGGGGAGATGGAGA
GATGAATGTGCATACCCAGTTTGATCGAGAATGTAACAGATGCGGCACGA
GAAACACCATGTGTGATGAATGACAAGAAGGAAGCAAGGCCAAGACAAGC
GGGAAAGTAAGCCGACAACCACCACTAATGTCAGTAGCACACTACGCAGT
AGCTTAGTGTAACGGTAGCATCAGTCGCAGCGACCGCAGAACAATCGGAA
AAAGAGATAAAAAAGAAGGAAAAACTCGTGTTCTCAGA
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protein sequence of NO27G01290.1

>NO27G01290.1-protein ID=NO27G01290.1-protein|Name=NO27G01290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=543bp
MDPTALQRAFLNLPNPTSILIADTMAPPVATVAATPLLPHDKDAFPPSLP
PSPVTAEEGSLFMPIAGSSSCSSTPSSSGTASLLLPATINSFPSLMEQAS
TVEGRPEGGREGKVGGPHLQAYPRLDPALPHKDLGDSPSRLAASKIPNHQ
GPKLALPPSLPPLTFSPSTGGGGREGGREGGRGIGLHDVLEAVMRGGGNL
PPEAPRVEPLPVAIHVLACLLFSLSLLVALVWLRFEKDILDSLDLPGRMG
GREASRQKRRRRKGSMGGEGDGGEEKEGECEWCVLCQKEREGEKEEGMRR
GRGEGGGINGVCALEKVREGGLGEGETPSRGPRGWGTEAGGGSREKAIGA
ACVEEEDEGTGEEKGQHQHQHHQHHQHHQHQHEYQHQQHHQHQHHQHQHQ
HRQQLTNPPPSHPSSTFQTPSKNKEALSGNVSPSLPPSLPPSLPPMTPSF
SASASLPDLASPPMHLQHAARTKGGGKGESEGAGGRIKSGLLLSSVPAVV
GGGGGGGGGGGGGGGEGGGGGGGGRGDADRGEGGDVDGKKAL*
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Synonyms
Publications