NO27G01080, NO27G01080 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO27G01080 vs. NCBI_GenBank
Match: XP_009111583.1 (PREDICTED: probable E3 ubiquitin-protein ligase ARI3 [Brassica rapa]) HSP 1 Score: 152.5 bits (384), Expect = 4.500e-33 Identity = 123/491 (25.05%), Postives = 206/491 (41.96%), Query Frame = 0 Query: 79 RILSETDLAVQQKKLMGDAMELLNVEALQAKMLLRRYRWNVRELMDNFEEATHFLEEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFECQVCFEEKKGGREGESEGMS-LECGHVFCRDCVGQQFKTKVEEGEAKKLTCLYPRCPQRYKEETVLELLKKEDVEKYLKQDILYYVGDCQGVIKPCPGV-DCGLYAQLQEGGGEGRREGGRISVVGSRAAAAERGRTAPVLVKCPGCRLKWCFSCAAEPHFVLACEYATKWKERTADEAEMATLELLKTTSKPCPWCAAFVHRIEGCNFMRCKCGGYWCYKCSGRVEKNVGHTWNRIEGHECGR---EGVGSAN--GDDTKRFMFYLNQYRAQTFLNEDDARAKGAEREEMEDVA----------------LVNKARRALANSYVFAYYAF-------DPASSLSGTKLTLYQDKQQQL 540 RI++ L QK+++ MELL ++ QA+ LL Y+WNV +L+D + E C++C ++ + +S M+ ++CGH FC +C + F K+ EG +K++TC+ +C E+ V +L+ E EK+ + + YV D + V K CP CG + ++ GGE V+C C ++CFSC +E H +C WK++ DE+E TL + ++ CP C+ V R +GCN M C CG ++C+ C G + HTW I+GH CG+ E V D KR+ Y +QYR+ T ++ + + + + RE++ ++ L+ ++R+ L+ +YVFA+Y F + + K L+++ QQQL Sbjct: 42 RIITNESLVAAQKEVLARVMELLTLKKSQARTLLIHYQWNVDKLLDVYSE--------------------------------------------------RGKDSLFKTAGLTVFSHTSLSESRYSLRKKMTCEICMDD-----DLQSYTMTRMDCGHCFCNNCWKEHFTVKINEGMSKRITCMAHKCNAICDEDVVKKLVYPEIAEKFDRFLVESYVDDNKRV-KWCPSTPHCGNAIRREDDGGE---------------------------VEC-SCGHQFCFSCLSESHSPCSCLMWKLWKKKCEDESE--TLNWITVHTRMCPKCSKSVQRSDGCNLMTCICGQHFCWLCGGAT--GLSHTWTTIDGHSCGKFKEEKVKQIEIAKRDLKRYTHYYHQYRSHTDSSKQEFKLRESVREKVASLSEKTLKSEQKWASNGADLLFRSRKVLSYTYVFAFYMFGEELFKDEMSDEEREMKKILFENLQQQL 444
BLAST of NO27G01080 vs. NCBI_GenBank
Match: XP_013725040.1 (probable E3 ubiquitin-protein ligase ARI3 [Brassica napus]) HSP 1 Score: 152.5 bits (384), Expect = 4.500e-33 Identity = 123/491 (25.05%), Postives = 206/491 (41.96%), Query Frame = 0 Query: 79 RILSETDLAVQQKKLMGDAMELLNVEALQAKMLLRRYRWNVRELMDNFEEATHFLEEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFECQVCFEEKKGGREGESEGMS-LECGHVFCRDCVGQQFKTKVEEGEAKKLTCLYPRCPQRYKEETVLELLKKEDVEKYLKQDILYYVGDCQGVIKPCPGV-DCGLYAQLQEGGGEGRREGGRISVVGSRAAAAERGRTAPVLVKCPGCRLKWCFSCAAEPHFVLACEYATKWKERTADEAEMATLELLKTTSKPCPWCAAFVHRIEGCNFMRCKCGGYWCYKCSGRVEKNVGHTWNRIEGHECGR---EGVGSAN--GDDTKRFMFYLNQYRAQTFLNEDDARAKGAEREEMEDVA----------------LVNKARRALANSYVFAYYAF-------DPASSLSGTKLTLYQDKQQQL 540 RI++ L QK+++ MELL ++ QA+ LL Y+WNV +L+D + E C++C ++ + +S M+ ++CGH FC +C + F K+ EG +K++TC+ +C E+ V +L+ E EK+ + + YV D + V K CP CG + ++ GGE V+C C ++CFSC +E H +C WK++ DE+E TL + ++ CP C+ V R +GCN M C CG ++C+ C G + HTW I+GH CG+ E V D KR+ Y +QYR+ T ++ + + + + RE++ ++ L+ ++R+ L+ +YVFA+Y F + + K L+++ QQQL Sbjct: 42 RIITNESLVAAQKEVLARVMELLTLKKSQARTLLIHYQWNVDKLLDVYSE--------------------------------------------------RGKDSLFKTAGLTVFSHTSLSESRYSLRKKMTCEICMDD-----DLQSYTMTRMDCGHCFCNNCWKEHFTVKINEGMSKRITCMAHKCNAICDEDVVKKLVYPEIAEKFDRFLVESYVDDNKRV-KWCPSTPHCGNAIRREDDGGE---------------------------VEC-SCGHQFCFSCLSESHSPCSCLMWKLWKKKCEDESE--TLNWITVHTRMCPKCSKSVQRSDGCNLMTCICGQHFCWLCGGAT--GLSHTWTTIDGHSCGKFKEEKVKQIEIAKRDLKRYTHYYHQYRSHTDSSKQEFKLRESVREKVASLSEKTLKSEQKWASNGADLLFRSRKVLSYTYVFAFYMFGEELFKDEMSDEEREMKKILFENLQQQL 444
BLAST of NO27G01080 vs. NCBI_GenBank
Match: XP_013694063.1 (probable E3 ubiquitin-protein ligase ARI3 [Brassica napus]) HSP 1 Score: 151.0 bits (380), Expect = 1.300e-32 Identity = 123/494 (24.90%), Postives = 208/494 (42.11%), Query Frame = 0 Query: 76 SPYRILSETDLAVQQKKLMGDAMELLNVEALQAKMLLRRYRWNVRELMDNFEEATHFLEEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFECQVCFEEKKGGREGESEGMS-LECGHVFCRDCVGQQFKTKVEEGEAKKLTCLYPRCPQRYKEETVLELLKKEDVEKYLKQDILYYVGDCQGVIKPCPGV-DCGLYAQLQEGGGEGRREGGRISVVGSRAAAAERGRTAPVLVKCPGCRLKWCFSCAAEPHFVLACEYATKWKERTADEAEMATLELLKTTSKPCPWCAAFVHRIEGCNFMRCKCGGYWCYKCSGRVEKNVGHTWNRIEGHECGR---EGVGSAN--GDDTKRFMFYLNQYRAQTFLNEDDARAKGAEREEMEDVA----------------LVNKARRALANSYVFAYYAF-------DPASSLSGTKLTLYQDKQQQL 540 S +I++ L QK+++ MELL ++ QA+ LL YRWNV +L+D + E C++C ++ + +S M+ ++CGH FC +C + F K+ EG +K++TC+ +C E+ V +L+ E EK+ + + YV D + V K CP CG + ++ GGE V+C C ++CFSC +E H +C W+++ DE+E TL + ++ CP C+ V + +GCN M C CG ++C+ C G + HTW I+GH CG+ E V D KR+ Y +QYR+ T ++ + + + + RE++ ++ L+ ++R+AL+ +YVFA+Y F + + K L+++ QQQL Sbjct: 42 STSQIITNESLVAAQKEVLVRVMELLTLKKSQARTLLIHYRWNVDKLLDVYSE--------------------------------------------------RGKESLFKTAGLTVFAHTSLSESRYSLRKKMTCEICMDD-----DLQSYTMTRMDCGHCFCNNCWKEHFTVKINEGMSKRITCMAHKCNAICDEDVVKKLVYPELAEKFDRFLVESYVDDNKRV-KWCPSTPHCGNAIRREDDGGE---------------------------VEC-SCGHQFCFSCVSESHSPCSCLMWKLWEKKCEDESE--TLNWITVHTRMCPKCSKAVQKSDGCNLMTCICGQHFCWLCGGAT--GLSHTWTTIDGHSCGKFKEEKVRQMERAKRDLKRYTHYYHQYRSHTDSSKQEFKLRESVREKVASLSEKTHKSEQKWASNGADLLFRSRKALSYTYVFAFYMFGEELFKDEMSDEEREMKKILFENLQQQL 447
BLAST of NO27G01080 vs. NCBI_GenBank
Match: XP_013610208.1 (PREDICTED: probable E3 ubiquitin-protein ligase ARI3 [Brassica oleracea var. oleracea]) HSP 1 Score: 150.6 bits (379), Expect = 1.700e-32 Identity = 123/494 (24.90%), Postives = 207/494 (41.90%), Query Frame = 0 Query: 76 SPYRILSETDLAVQQKKLMGDAMELLNVEALQAKMLLRRYRWNVRELMDNFEEATHFLEEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFECQVCFEEKKGGREGESEGMS-LECGHVFCRDCVGQQFKTKVEEGEAKKLTCLYPRCPQRYKEETVLELLKKEDVEKYLKQDILYYVGDCQGVIKPCPGV-DCGLYAQLQEGGGEGRREGGRISVVGSRAAAAERGRTAPVLVKCPGCRLKWCFSCAAEPHFVLACEYATKWKERTADEAEMATLELLKTTSKPCPWCAAFVHRIEGCNFMRCKCGGYWCYKCSGRVEKNVGHTWNRIEGHECGR---EGVGSAN--GDDTKRFMFYLNQYRAQTFLNEDDARAKGAEREEMEDVA----------------LVNKARRALANSYVFAYYAF-------DPASSLSGTKLTLYQDKQQQL 540 S +I++ L QK+++ MELL ++ QA+ LL YRWNV +L+D + E C++C ++ + +S M+ ++CGH FC +C + F K+ EG +K++TC+ +C E+ V +L+ E EK+ + + YV D + V K CP CG + ++ GGE V+C C ++CFSC +E H +C WK++ DE+E TL + ++ CP C+ V + +GCN M C CG ++C+ C G + HTW I+GH CG+ E V D KR+ Y +QYR+ T ++ + + + + RE++ ++ L+ ++R+ L+ +YVFA+Y F + + K L+++ QQQL Sbjct: 42 STSQIITNESLVAAQKEVLVRVMELLTLKKSQARTLLIHYRWNVDKLLDVYSE--------------------------------------------------RGKESLFKTAGLTVFAHTSLSESRYSLRKKMTCEICMDD-----DLQSYTMTRMDCGHCFCNNCWKEHFTVKINEGMSKRITCMAHKCNAICDEDVVKKLVYPELAEKFDRFLVESYVDDNKRV-KWCPSTPHCGNAIRREDDGGE---------------------------VEC-SCGHQFCFSCLSESHSPCSCLMWKLWKKKCEDESE--TLNWITVHTRMCPKCSKAVQKSDGCNLMTCICGQHFCWLCGGAT--GLSHTWTTIDGHSCGKFKEEKVRQMERAKRDLKRYTHYYHQYRSHTDSSKQEFKLRESVREKVASLSEKTHKSEQKWASNGADLLFRSRKVLSYTYVFAFYMFGEELFKDEMSDEEREMKKILFENLQQQL 447
BLAST of NO27G01080 vs. NCBI_GenBank
Match: GAQ81569.1 (hypothetical protein KFL_000840120 [Klebsormidium nitens]) HSP 1 Score: 150.6 bits (379), Expect = 1.700e-32 Identity = 113/375 (30.13%), Postives = 172/375 (45.87%), Query Frame = 0 Query: 209 FECQVCFEEKKGGREGESEGMSLECGHVFCRDCVGQQFKTKVEEGEAKKLTCLYPRCPQRYKEETVLELLKKED---VEKYLKQDILYYVGDCQGVIKPCPGV-DCGLYAQLQEGGGEGRREGGRISVVGSRAAAAERGRTAPVLVKCPGCRLKWCFSCAAEPHFVLACEYATKWKERTADEAEMATLELLKTTSKPCPWCAAFVHRIEGCNFMRCKCGGYWCYKCSGRVEKNVGHTWNRIEGHECGR-----EGVGSANGDDTKRFMFYLNQYRA--QTFLNEDDAR----AKGAEREEMEDVA-----LVN------KARRALANSYVFAYYAF-------DPASSLSGTKLTLYQDKQQQLEQECEVFAAML 551 F C CF++ ++C H++C DC F K+ EG+++++TC+ +C EE VL+L+ + D V++Y + + Y+ D +K CP V CG +++ GE E V+C C L +CF+C E H +C+ +W E++ DE+E T+ L +KPCP C V + GCN ++C C +C+ C + H W+RIEGH CGR E D KR+M Y +++ ++ ED R +K A EE E V L N +ARR LA SY FA+Y F D + + L++D QQQLE E A ++ Sbjct: 148 FTCGTCFDDVPA-----DSATVMDCSHIYCNDCWTTYFLMKIREGQSRRITCMAHKCNAICDEEKVLKLVAEADPLAVDRYERSLLESYIED-NSKVKWCPSVPHCGNALRVE---GEPYVE-----------------------VQCT-CGLTFCFNCGLEAHSPCSCDIWRRWDEKSRDESE--TVNWLVANTKPCPKCGKKVEKSGGCNLVQCTCKQPFCWLCGAAT--GLAHDWSRIEGHSCGRYKEDKEREAKKAETDLKRYMHYHTRWKGHMESLRLEDKQREVVQSKIAILEESESVVRDYSWLTNAQSCLFRARRVLAYSYAFAFYMFGSDLFKDDISPEQNEINQNLFEDHQQQLEATVERLAKLV 485
BLAST of NO27G01080 vs. NCBI_GenBank
Match: XP_019166049.1 (PREDICTED: probable E3 ubiquitin-protein ligase ARI2 [Ipomoea nil]) HSP 1 Score: 149.4 bits (376), Expect = 3.800e-32 Identity = 107/367 (29.16%), Postives = 169/367 (46.05%), Query Frame = 0 Query: 211 CQVCFEEKKGGREGESEGMSLECGHVFCRDCVGQQFKTKVEEGEAKKLTCLYPRCPQRYKEETVLELLKKED---VEKYLKQDILYYVGDCQGVIKPCPGV-DCGLYAQLQEGGGEGRREGGRISVVGSRAAAAERGRTAPVLVKCPGCRLKWCFSCAAEPHFVLACEYATKWKERTADEAEMATLELLKTTSKPCPWCAAFVHRIEGCNFMRCKCGGYWCYKCSGRVEKNVGHTWNRIEGHECGR-----EGVGSANGDDTKRFMFYLNQYRAQTFLNEDDARAKGAERE----------EMEDVALVN-------KARRALANSYVFAYYAF-------DPASSLSGTKLTLYQDKQQQLEQECE 545 C +C EE G SE ++CGH FC C + F K++EG++K++ C+ +C E V +L+ KE EK+ + + Y+ D ++K CP CG +++ V+C C +++CFSC +E H +C W ++ DE+E T+ + +KPCP C V + GCN + C CG +C+ C G ++ HTW+RI GH CGR E D R+M Y N+Y+A T + ++R K R+ +++D + V ++RRAL+ SY FA+Y F + + K L++D+QQQLE E Sbjct: 123 CNICIEELPG-----SEMTKMDCGHCFCNSCWTEHFIVKIKEGQSKRIRCMAHKCFAICDESVVRKLVSKEHPDLAEKFDRFLLESYIED-NKMVKWCPSTPHCGNAIRIE--------------------------NDELFEVEC-SCGVQFCFSCLSEAHSPCSCLMWELWTKKCRDESE--TVNWITVHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGRD--HTWSRIAGHSCGRYKEDQEKKAERAKRDLYRYMHYHNRYKAHTDSFKQESRLKETIRDKVSSLEARDSKLKDFSWVTNGLNRLFRSRRALSYSYPFAFYMFGDDLFKDEMTNEQREIKQNLFEDQQQQLEANVE 452
BLAST of NO27G01080 vs. NCBI_GenBank
Match: XP_021680765.1 (probable E3 ubiquitin-protein ligase ARI2 [Hevea brasiliensis]) HSP 1 Score: 148.7 bits (374), Expect = 6.500e-32 Identity = 108/373 (28.95%), Postives = 172/373 (46.11%), Query Frame = 0 Query: 211 CQVCFEEKKGGREGESEGMSLECGHVFCRDCVGQQFKTKVEEGEAKKLTCLYPRCPQRYKEETVLELLKKED---VEKYLKQDILYYVGDCQGVIKPCPGV-DCGLYAQLQEGGGEGRREGGRISVVGSRAAAAERGRTAPVLVKCPGCRLKWCFSCAAEPHFVLACEYATKWKERTADEAEMATLELLKTTSKPCPWCAAFVHRIEGCNFMRCKCGGYWCYKCSGRVEKNVGHTWNRIEGHECGR-----EGVGSANGDDTKRFMFYLNQYRAQTFLNEDDARAK---------GAERE-EMEDVALVN-------KARRALANSYVFAYYAF-------DPASSLSGTKLTLYQDKQQQLEQECEVFAAML 551 C +C E+ G ++ ++CGH FC DC + F K+ EG+++++ C+ +C E V L+ K+ EK+ + + Y+ D ++K CP + CG +++E E V+C C L++CFSC +E H +C W ++ DE+E T+ + +KPCP C V + GCN + C CG +C+ C G ++ HTW+RI GH CGR E D R+M Y N+Y+A T + +++ K ERE + D + VN ++RR L+ SY FA+Y F + + K L++D+QQQLE E + L Sbjct: 122 CDICIEDVSG-----NKATRMDCGHCFCNDCWTEHFIVKINEGQSRRIRCMAHKCNAICDEAVVRNLVSKKHPDLAEKFDRFLLESYIED-NKMVKWCPSIPHCGNAIRIEED------------------ECCE--------VEC-SCGLQFCFSCLSEAHSPCSCLMWELWSKKCQDESE--TVNWITVHTKPCPKCHKPVEKNGGCNLVSCICGQSFCWLCGGSTGRD--HTWSRISGHSCGRYKEDQEKKTERAKRDLYRYMHYHNRYKAHTDSFKLESKLKETILEKVSISEERESRLRDFSWVNNGLYRLFRSRRVLSYSYPFAFYMFGEELFKDEMTTEEREIKQNLFEDQQQQLESNVEKLSKFL 457
BLAST of NO27G01080 vs. NCBI_GenBank
Match: XP_016439611.1 (PREDICTED: probable E3 ubiquitin-protein ligase ARI2 [Nicotiana tabacum]) HSP 1 Score: 147.5 bits (371), Expect = 1.400e-31 Identity = 105/375 (28.00%), Postives = 169/375 (45.07%), Query Frame = 0 Query: 211 CQVCFEEKKGGREGESEGMSLECGHVFCRDCVGQQFKTKVEEGEAKKLTCLYPRCPQRYKEETVLELLKKED---VEKYLKQDILYYVGDCQGVIKPCPGV-DCGLYAQLQEGGGEGRREGGRISVVGSRAAAAERGRTAPVLVKCPGCRLKWCFSCAAEPHFVLACEYATKWKERTADEAEMATLELLKTTSKPCPWCAAFVHRIEGCNFMRCKCGGYWCYKCSGRVEKNVGHTWNRIEGHECGR-----EGVGSANGDDTKRFMFYLNQYRAQTFLNEDDARAKGAEREEM-----------------EDVALVNKARRALANSYVFAYYAF-------DPASSLSGTKLTLYQDKQQQLEQECEVFAAMLVD 553 C +C EE G S+ ++CGH FC +C + F K++EG++K++ CL +C E + +L+ K EK+ + + Y+ D ++K CP + CG +L+ V+C C L++CFSC +E H +C W ++ DE+E T+ + +KPCP C V + GCN + C CG +C+ C G ++ HTW+ I GH CGR E D R+M Y N+Y+A T + ++R + +E++ + ++++RRAL+ SY FAYY F + K L++D+QQQLE E + D Sbjct: 119 CNICIEEVAG-----SDVTKMDCGHCFCNECWTEHFIVKIKEGQSKRIRCLAHKCFAICDEAVIRKLVSKRHPDLAEKFDRFLLESYIED-NKMVKWCPSIPHCGNAIRLETDD--------------------------LCEVEC-SCGLQFCFSCLSEAHSPCSCLMWELWTKKCRDESE--TVNWITVHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGRD--HTWSHITGHSCGRYKEDQEKKAERAKRDLYRYMHYHNRYKAHTDSSTQESRLRDTIKEKVAILEAKESIVKDFSWITNGLYRLSRSRRALSFSYPFAYYMFGDDLFKDEMTKEEKEIKQHLFEDQQQQLEANIEKLSKAFED 456
BLAST of NO27G01080 vs. NCBI_GenBank
Match: CDY20037.1 (BnaA09g02140D [Brassica napus]) HSP 1 Score: 147.1 bits (370), Expect = 1.900e-31 Identity = 122/491 (24.85%), Postives = 205/491 (41.75%), Query Frame = 0 Query: 79 RILSETDLAVQQKKLMGDAMELLNVEALQAKMLLRRYRWNVRELMDNFEEATHFLEEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFECQVCFEEKKGGREGESEGMS-LECGHVFCRDCVGQQFKTKVEEGEAKKLTCLYPRCPQRYKEETVLELLKKEDVEKYLKQDILYYVGDCQGVIKPCPGV-DCGLYAQLQEGGGEGRREGGRISVVGSRAAAAERGRTAPVLVKCPGCRLKWCFSCAAEPHFVLACEYATKWKERTADEAEMATLELLKTTSKPCPWCAAFVHRIEGCNFMRCKCGGYWCYKCSGRVEKNVGHTWNRIEGHECGR---EGVGSAN--GDDTKRFMFYLNQYRAQTFLNEDDARAKGAEREEMEDVA----------------LVNKARRALANSYVFAYYAF-------DPASSLSGTKLTLYQDKQQQL 540 RI++ L QK+++ MELL ++ QA+ LL Y+WNV +L+D + E C++C ++ + +S M+ ++CGH FC +C + F K+ EG +K++TC+ +C E+ V +L+ E EK+ + + YV D + V K CP CG + ++ GGE V+C C ++CFSC +E H +C WK++ DE+E TL + ++ CP C+ V R +GCN M C CG ++C+ C G + HT I+GH CG+ E V D KR+ Y +QYR+ T ++ + + + + RE++ ++ L+ ++R+ L+ +YVFA+Y F + + K L+++ QQQL Sbjct: 42 RIMTNESLVAAQKEVLARVMELLTLKKSQARTLLIHYQWNVDKLLDVYSE--------------------------------------------------RGKDSLFKTAGLTVFSHTSLSESRYSLRKKMTCEICMDD-----DLQSYTMTRMDCGHCFCNNCWKEHFTVKINEGMSKRITCMAHKCNAICDEDVVKKLVYPELAEKFDRFLVESYVDDNKRV-KWCPSTPHCGNAIRREDDGGE---------------------------VEC-SCGHQFCFSCLSESHSPCSCLMWKLWKKKCEDESE--TLNWITVHTRMCPKCSKSVQRSDGCNLMTCICGQHFCWLCGGAT--GLSHTGTTIDGHSCGKFKEEKVKQIEIAKRDLKRYTHYYHQYRSHTDSSKQEFKLRESVREKVASLSEKTLKSEQKWASNGADLLFRSRKVLSYTYVFAFYMFGEELFKDEMSDEEREMKKILFENLQQQL 444
BLAST of NO27G01080 vs. NCBI_GenBank
Match: XP_009605030.1 (PREDICTED: probable E3 ubiquitin-protein ligase ARI2 [Nicotiana tomentosiformis]) HSP 1 Score: 146.7 bits (369), Expect = 2.500e-31 Identity = 104/375 (27.73%), Postives = 169/375 (45.07%), Query Frame = 0 Query: 211 CQVCFEEKKGGREGESEGMSLECGHVFCRDCVGQQFKTKVEEGEAKKLTCLYPRCPQRYKEETVLELLKKED---VEKYLKQDILYYVGDCQGVIKPCPGV-DCGLYAQLQEGGGEGRREGGRISVVGSRAAAAERGRTAPVLVKCPGCRLKWCFSCAAEPHFVLACEYATKWKERTADEAEMATLELLKTTSKPCPWCAAFVHRIEGCNFMRCKCGGYWCYKCSGRVEKNVGHTWNRIEGHECGR-----EGVGSANGDDTKRFMFYLNQYRAQTFLNEDDARAKGAEREEM-----------------EDVALVNKARRALANSYVFAYYAF-------DPASSLSGTKLTLYQDKQQQLEQECEVFAAMLVD 553 C +C EE G S+ ++CGH FC +C + F K++EG++K++ C+ +C E + +L+ K EK+ + + Y+ D ++K CP + CG +L+ V+C C L++CFSC +E H +C W ++ DE+E T+ + +KPCP C V + GCN + C CG +C+ C G ++ HTW+ I GH CGR E D R+M Y N+Y+A T + ++R + +E++ + ++++RRAL+ SY FAYY F + K L++D+QQQLE E + D Sbjct: 119 CNICIEEVAG-----SDVTKMDCGHCFCNECWTEHFIVKIKEGQSKRIRCMAHKCFAICDEAVIRKLVSKRHPDLAEKFDRFLLESYIED-NKMVKWCPSIPHCGNAIRLETDD--------------------------LCEVEC-SCGLQFCFSCLSEAHSPCSCLMWELWTKKCRDESE--TVNWITVHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGRD--HTWSHITGHSCGRYKEDQEKKAERAKRDLYRYMHYHNRYKAHTDSSTQESRLRDTIKEKVAILEAKESIVKDFSWITNGLYRLSRSRRALSFSYPFAYYMFGDDLFKDEMTKEEKEIKQHLFEDQQQQLEANIEKLSKAFED 456 The following BLAST results are available for this feature:
BLAST of NO27G01080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following gene feature(s) are orthologous to this gene:
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO27G01080 ID=NO27G01080|Name=NO27G01080|organism=Nannochloropsis oceanica|type=gene|length=5298bpback to top protein sequence of NO27G01080.3 >NO27G01080.3-protein ID=NO27G01080.3-protein|Name=NO27G01080.3|organism=Nannochloropsis oceanica|type=polypeptide|length=546bpback to top protein sequence of NO27G01080.2 >NO27G01080.2-protein ID=NO27G01080.2-protein|Name=NO27G01080.2|organism=Nannochloropsis oceanica|type=polypeptide|length=660bpback to top protein sequence of NO27G01080.1 >NO27G01080.1-protein ID=NO27G01080.1-protein|Name=NO27G01080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=607bpback to top Synonyms
Publications
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