NO27G00560, NO27G00560 (gene) Nannochloropsis oceanica

Overview
NameNO27G00560
Unique NameNO27G00560
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3163
Alignment locationchr27:204811..207973 +

Link to JBrowse

Properties
Property NameValue
Descriptioncinnamoyl coa reductase 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr27genomechr27:204811..207973 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0050662coenzyme binding
GO:0050662coenzyme binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR001509Epimerase_deHydtase_N
Homology
BLAST of NO27G00560 vs. NCBI_GenBank
Match: XP_005646737.1 (cinnamyl-alcohol dehydrogenase-like protein [Coccomyxa subellipsoidea C-169] >EIE22193.1 cinnamyl-alcohol dehydrogenase-like protein [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 186.4 bits (472), Expect = 2.000e-43
Identity = 124/343 (36.15%), Postives = 174/343 (50.73%), Query Frame = 0
Query:   48 PITVCVTGCNGYVASELVKQLLEKGYHVRGTVRKLSGLTKEERERRYGSLERLSLXXXXXXXXXXXXXXXXXXXXXXXMKRGGCTLPSSTPTLTLHEADLTVPDSFDEAVKGCTYVFHVASPVVYDAKADPRKDILLPALAGVKNVLSAIQKAREEETDGGREEGGKEGGVTFKRLILTSSTGAVYGGPAAVPKAAAVKEKEGWRGDTEGREEALFTEEDWNEECSL-SVLPYYYSKVMAEREGWRKAEKEGIDLVVVCPSYVWGPPAVKGAGSFNTARLRAILKGEETPWTFDFP-VCDTRDIAAVQIAAAEKQDAHGRFIISSSKTISPSWVIGVVHRRFP 389
            PI V VTG  G+VA+EL+KQLL KGY+VRGTVR LS   K +   + G+                                    LP +   L L EA+L    SFDE V+G T++FH ASP   +   DP+KD++ PAL G +NVL++  KA++                T KR++LTSS        AA PK                   +L+TEEDWNE  SL +   Y+ SK +AE+E WR A++EG+DLV V P++V GP     A   +   L+ I++G+    T   P +CD RD+AA  + AAE   A GR+I+S    ++ +++  V+  RFP
Sbjct:    5 PIAV-VTGAGGFVATELIKQLLSKGYNVRGTVRSLSDTGKMQHLTKLGN-----------------------------------ALPGN---LELQEANLLQEGSFDEVVRGSTFLFHTASPFFIET-PDPQKDLIDPALKGTQNVLASAAKAKD----------------TLKRVVLTSSVAGANCTYAAPPK-----------------NGSLYTEEDWNETSSLENGQAYHLSKTVAEKEAWRLAKEEGLDLVAVLPNFVLGPVVSSRADGTSVGFLKGIVEGKPVEGT---PLICDVRDVAAAHVLAAETPSASGRYIVSQRTPVTATYLSKVLRERFP 271          
BLAST of NO27G00560 vs. NCBI_GenBank
Match: XP_005649263.1 (NAD(P)-binding protein [Coccomyxa subellipsoidea C-169] >EIE24719.1 NAD(P)-binding protein [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 182.6 bits (462), Expect = 2.900e-42
Identity = 130/402 (32.34%), Postives = 188/402 (46.77%), Query Frame = 0
Query:   50 TVCVTGCNGYVASELVKQLLEKGYHVRGTVRKLSGLTKEERERRYGSLERLSLXXXXXXXXXXXXXXXXXXXXXXXMKRGGCTLPSSTPTLTLHEADLTVPDSFDEAVKGCTYVFHVASPVVYDAKADPRKDILLPALAGVKNVLSAIQKAREEETDGGREEGGKEGGVTFKRLILTSSTGAVYGGPAAVPKAAAVKEKEGWRGDTEGREEALFTEEDWNEECSLSVLPYYYSKVMAEREGWRKAEKEGIDLVVVCPSYVWGPPAVKGAGSFNTARLRAIL--KGEE-TPWTFDFPVCDTRDIAAVQIAAAEKQDAHGRFIISSSKTISPSWVIGVVHRRFPGXXXXXXXXXXXXXXXXXXXXXXXXVKSRRVFDVSKVEALLGRPLKAPEETLRDMVQAML 449
            T  VTG  G+VA+E+ +QLLEKGY+VRGTVR L+       + +Y  L+ L                             G  LP     LTLHEADL    SFD+ VKG  +VFH ASP + +   DP+KD++ PA+ G +NV+ A  K+++                T KR+++TSS             AA VK ++G       +  +LFTEEDWN+E SL   PY +SK  AE+E W  +++EG+DLV + P++V GP       + +    +  +  KG +  PW       D RDI    + A E   A GR+I+S   T+S  ++  V+  RFP                           +++V D SKV+  LG  L   + T  DM   ++
Sbjct:    4 TAVVTGATGFVATEICRQLLEKGYNVRGTVRSLAS------KEKYSHLQAL-----------------------------GEALPG---VLTLHEADLLAEGSFDDVVKGADFVFHTASPFIREVH-DPQKDLVDPAVKGTRNVVQAAVKSKD----------------TVKRIVVTSSF------------AAVVKSQKG------PQNGSLFTEEDWNDESSLDDQPYRFSKTEAEKEAWAISKREGLDLVTINPTFVLGPVVSSRTDATSIILFKDFVENKGADIIPWQ-----VDVRDIGRAHVLAVEVPTASGRYIVSHDSTLSTKYISEVLSERFP----------------QYQFPSGEDAPAKQVLDNSKVQKELGLQLLPAKFTYIDMATTLI 311          
BLAST of NO27G00560 vs. NCBI_GenBank
Match: EWM21041.1 (dihydrokaempferol 4-reductase, partial [Nannochloropsis gaditana])

HSP 1 Score: 177.6 bits (449), Expect = 9.400e-41
Identity = 120/201 (59.70%), Postives = 130/201 (64.68%), Query Frame = 0
Query:   51 VCVTGCNGYVASELVKQLLEKGYHVRGTVRKLSGLTKEERERRYGSLERLSLXXXXXXXXXXXXXXXXXXXXXXXMKRGGCTL-----PSSTPTLTLHEADLTVPDSFDEAVKGCTYVFHVASPVVYDAKADPRKDILLPALAGVKNVLSAIQKAREEETDGGREEGGKEGGVTFKRLILTSSTGAVYGGPAAVPKAAAVK 247
            VCVTGCNGYVASELVKQLLE+GY+V GTVRKL  LT+EERE +YG L +L  XXXXXXXXXXXX             RG C             LTL EADL  P SFD AV+GCTYVFHVASPVVY + ADP  D+L PAL GV+NVL AIQ                     FKRLILTSSTGAVYGGP AVPK+A  K
Sbjct:   78 VCVTGCNGYVASELVKQLLERGYNVHGTVRKLHKLTEEEREEKYGPLAKLGXXXXXXXXXXXXXRVGRHRKED---SRGSCDEGVGDGEKGRGCLTLFEADLRQPHSFDAAVRGCTYVFHVASPVVYASGADPETDLLEPALEGVRNVLRAIQD--XXXXXXXXXXXXXXXXXXFKRLILTSSTGAVYGGPTAVPKSALEK 273          
BLAST of NO27G00560 vs. NCBI_GenBank
Match: XP_005649576.1 (NAD(P)-binding protein [Coccomyxa subellipsoidea C-169] >EIE25032.1 NAD(P)-binding protein [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 173.3 bits (438), Expect = 1.800e-39
Identity = 134/403 (33.25%), Postives = 186/403 (46.15%), Query Frame = 0
Query:   49 ITVCVTGCNGYVASELVKQLLEKGYHVRGTVRKLSGLTKEERERRYGSLERLSLXXXXXXXXXXXXXXXXXXXXXXXMKRGGCTLPSSTPTLTLHEADLTVPDSFDEAVKGCTYVFHVASPVVYDAKADPRKDILLPALAGVKNVLSAIQKAREEETDGGREEGGKEGGVTFKRLILTSSTGAVYGGPAAVPKAAAVKEKEGWRGDTEGREEALFTEEDWNEECSLSVLPYYYSKVMAEREGWRKAEKEGIDLVVVCPSYVWGPPAVKGAGSFNTARLRAILKGEE---TPWTFDFPVCDTRDIAAVQIAAAEKQDAHGRFIISSSKTISPSWVIGVVHRRFPGXXXXXXXXXXXXXXXXXXXXXXXXVKSRRVFDVSKVEALLGRPLKAPEETLRDMVQAML 449
            +TV VTG  G++A+ELVKQLLEKGY VRGTVR L    KEE+     +L+                                  LP +   LTLHEADL    SFDE VKG  YVFH ASP       D +KD++ PA+ G   VL ++ K++              G V  KR++LTSS             AA +K K   +G  +G+   +FT++DWN+E ++S  PY YSK  AE+     AEKEG ++  + P++V GP     A + +   ++  ++  E    PW      CD RDIA   I AAE   A GR+I+ +   +  S++  V+  RFP                           S   +D SKVE  LG  +   +ET  DM   ++
Sbjct:    3 LTVTVTGATGFIATELVKQLLEKGYDVRGTVRSLK---KEEKVAHLKALD--------------------------------AALPGN---LTLHEADLLEEGSFDEVVKGADYVFHTASPFFMGDSPDAQKDLVDPAVKGTTTVLRSVAKSK--------------GSV--KRVVLTSSV------------AAIMKMK---KGPLKGK---VFTDQDWNDENTVSDGPYMYSKTEAEKAARALAEKEGFEIATIHPAFVMGPVIAARADATSIVTMKGFIEHGEYSFFPWH-----CDVRDIARAHILAAEVPLATGRYIV-AQPPVPTSYLSKVLSERFPQFKFPAGKEDD---------------SSETSYDTSKVEKELGLRMHPLKETYVDMATTLI 312          
BLAST of NO27G00560 vs. NCBI_GenBank
Match: WP_044340585.1 (aldehyde reductase [Bacillus aquimaris])

HSP 1 Score: 166.4 bits (420), Expect = 2.200e-37
Identity = 117/343 (34.11%), Postives = 171/343 (49.85%), Query Frame = 0
Query:   50 TVCVTGCNGYVASELVKQLLEKGYHVRGTVRKLSGLTKEERERRYGSLERLSLXXXXXXXXXXXXXXXXXXXXXXXMKRGGCTLPSSTP-TLTLHEADLTVPDSFDEAVKGCTYVFHVASPVVYDAKADPRKDILLPALAGVKNVLSAIQKAREEETDGGREEGGKEGGVTFKRLILTSSTGAVYGGPAAVPKAAAVKEKEGWRGDTEGREEALFTEEDWNEECSLSVLPYYYSKVMAEREGWRKAE-KEGIDLVVVCPSYVWGPPAVKGAGSFNTARLRAILKGEETPWTFDFP--VCDTRDIAAVQIAAAEKQDAHGRFIISSSKTISPSWVIGVVHRRFP 389
            TV VTG  G+VAS LVK+LLE+G++VR TVR L      ++E +Y  L+                                  + SSTP TLTL+EADL    SFD+AV G  YVFH ASP + +   DP K+++ PA  G +NVL+++ K++                 + KR++LTSS  A++G                   D +G+    FTE+DWN   S    PY YSK +AE+E W+  + ++  DLV + PS+V GP   K   S +T+ + + L G       D    V D RDIA   + AA K +A GR+I+S  + I+ + +  ++ + FP
Sbjct:    5 TVLVTGGTGFVASWLVKELLEQGHNVRTTVRSL------QKEEKYQHLK---------------------------------DIESSTPGTLTLYEADLLKEGSFDQAVDGSEYVFHTASPFLINGIKDPEKELVEPAKKGTQNVLTSVNKSK-----------------SVKRVVLTSSVVAIFGDHI----------------DMKGK--PYFTEDDWNTTSSTEHQPYNYSKTLAEKEAWKMMKAQDRWDLVTINPSFVMGPALTKRTDSTSTSTILSFLTGGFKTGVPDLATGVVDVRDIAKAHMLAAFKPEAKGRYILSGGE-ITFTQIAKLIEKNFP 272          
BLAST of NO27G00560 vs. NCBI_GenBank
Match: XP_005851647.1 (hypothetical protein CHLNCDRAFT_50112 [Chlorella variabilis] >EFN59545.1 hypothetical protein CHLNCDRAFT_50112 [Chlorella variabilis])

HSP 1 Score: 163.7 bits (413), Expect = 1.400e-36
Identity = 115/400 (28.75%), Postives = 177/400 (44.25%), Query Frame = 0
Query:   50 TVCVTGCNGYVASELVKQLLEKGYHVRGTVRKLSGLTKEERERRYGSLERLSLXXXXXXXXXXXXXXXXXXXXXXXMKRGGCTLPSSTPTLTLHEADLTVPDSFDEAVKGCTYVFHVASPVVYDAKADPRKDILLPALAGVKNVLSAIQKAREEETDGGREEGGKEGGVTFKRLILTSSTGAVYGGP-AAVPKAAAVKEKEGWRGDTEGREEALFTEEDWNEECSLSVLPYYYSKVMAEREGWRKAEKEGIDLVVVCPSYVWGPPAVKGAGSFNTARLRAILKGEETPWTFDFPVCDTRDIAAVQIAAAEKQDAHGRFIISSSKTISPSWVIGVVHRRFPGXXXXXXXXXXXXXXXXXXXXXXXXVKSRRVFDVSKVEALLGRPLKAPEETLRDMVQAML 449
            TV VTG  GYVA+EL+ QLL KG++VR TVR  +   K                                      +    C   +   ++ L EADL V  +FD A  GC YVFH ASP   +A  DP+  ++ PA+ G +NV+ A+ + + +                 +R++LTSS  A+ G   AA PK  +                  ++E DWNE  +L    Y+ SKV AER  W  AE+ G+DLV + P ++ GP   + + + +   ++A L+G  T   F     D RD+A   I AAE   A GR+I++++ + SPS +   +  RFP                         ++   + + S+V+  LG  +   +ET+ DM   ++
Sbjct:    4 TVAVTGGGGYVATELIHQLLAKGFNVRATVRSKADAAK--------------------------------------VAHLTCLATALPGSVELVEADLLVEGAFDAAFAGCRYVFHTASPFFIEA-GDPQAQLVDPAVKGTRNVMQAVARNKAD----------------VRRIVLTSSCAAIKGNANAAAPKVGST-----------------YSEADWNETSTLPAEAYWCSKVQAERAAWELAEQHGLDLVTILPEFIMGPVISRRSDATSFGYMKAWLEG--TAQNFAPVFADVRDVARAHILAAENPAASGRYIVATTHSTSPSTISSWLQERFP----------------EYALADGEEMECTEIINNSRVQGELGLSITPVKETIVDMAATLV 313          
BLAST of NO27G00560 vs. NCBI_GenBank
Match: WP_098351467.1 (aldehyde reductase [Bacillus sp. AFS015802] >PFA68148.1 diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus sp. AFS015802])

HSP 1 Score: 160.6 bits (405), Expect = 1.200e-35
Identity = 118/345 (34.20%), Postives = 170/345 (49.28%), Query Frame = 0
Query:   48 PITVCVTGCNGYVASELVKQLLEKGYHVRGTVRKLSGLTKEERERRYGSLERLSLXXXXXXXXXXXXXXXXXXXXXXXMKRGGCTLPSSTP-TLTLHEADLTVPDSFDEAVKGCTYVFHVASPVVYDAKADPRKDILLPALAGVKNVLSAIQKAREEETDGGREEGGKEGGVTFKRLILTSSTGAVYGGPAAVPKAAAVKEKEGWRGDTEGREEALFTEEDWNEECSLSVLPYYYSKVMAEREGWR-KAEKEGIDLVVVCPSYVWGPPAVKGAGSFNTARLRAILKGEETPWTFDFP--VCDTRDIAAVQIAAAEKQDAHGRFIISSSKTISPSWVIGVVHRRFP 389
            P TV VTG  G+VAS LVK+LLE+G+ VR TVR L      ++E +Y  L+                                  + S+TP TLT++EADL    SFD+AV+G  YVFH ASP + +   DP K+++ PA  G +NVL+++ KA               G V  KR++LTSS  A++G                   D +G+    FTE+DWN   S    PY YSK +AE+E W+   +++  DLV + PS+V GP   K   S +T+ + + L G       D    V D RDIA   + AA   +A GR+I+S  + I+   +  ++ + FP
Sbjct:    3 PSTVLVTGGTGFVASWLVKELLEQGHDVRTTVRSL------QKEEKYQHLK---------------------------------DIESATPGTLTIYEADLLKEGSFDQAVEGSEYVFHTASPFLINGIKDPEKELVEPAKKGTQNVLTSVNKA---------------GSV--KRVVLTSSVVAIFGDHI----------------DMKGKPH--FTEDDWNTTSSKDHQPYNYSKTVAEKEAWKMMKDQDRWDLVTINPSFVMGPALTKRTDSTSTSTILSFLTGGFKTGVPDLATGVVDVRDIAKAHMLAAFTPEAKGRYILSGGE-ITFIEIAKLIEKNFP 272          
BLAST of NO27G00560 vs. NCBI_GenBank
Match: WP_054241183.1 (cinnamyl-alcohol dehydrogenase [Actinobacteria bacterium OV320] >KPI27462.1 NAD-dependent epimerase/dehydratase [Actinobacteria bacterium OV320])

HSP 1 Score: 156.8 bits (395), Expect = 1.700e-34
Identity = 111/345 (32.17%), Postives = 161/345 (46.67%), Query Frame = 0
Query:   50 TVCVTGCNGYVASELVKQLLEKGYHVRGTVRKLSGLTKEERERRYGSLERLSLXXXXXXXXXXXXXXXXXXXXXXXMKRGGCTLPSSTPTLTLHEADLTVPDSFDEAVKGCTYVFHVASPVVYDAK-ADPRKDILLPALAGVKNVLSAIQKAREEETDGGREEGGKEGGVTFKRLILTSSTGAVYGGPAAVPKAAAVKEKEGWRGDTEGREEALFTEEDWNEECSLSVLPYYYSKVMAEREGWR-KAEKEGIDLVVVCPSYVWGPPAVKGAGSFNTARLRAILKG---EETPWTFDFPVCDTRDIAAVQIAAAEKQDAHGRFIISSSKTISPSWVIGVVHRRFPG 390
            TV VTG +G+VA+ LV+QLLE+GYHV  TVR  +   K    R  G                                       +    L L EADL    SFDEA+KGCT VFHVASP +   K  D R+D++ PALAG +NV+++I++                   T +RL+LTS+ GA++G  A                D    ++   +E+ +N   ++   PY+Y+K +AER  W+ +A +    +V V P  + GP    G+ S +   L  + KG      P  F F   D RD+AA  IAAAE   AHGR+I+++ +  S   +   + +  PG
Sbjct:    9 TVLVTGGSGFVAAHLVQQLLERGYHVHTTVRATANAAKRRPLRALGD--------------------------------------AHPGRLDLFEADLLTEGSFDEAMKGCTVVFHVASPFLMPEKIKDGRRDVVEPALAGTRNVVASIERTE-----------------TVERLVLTSTVGAIFGDYA----------------DVREMDDQTLSEKYFNTTSTVENNPYHYAKTVAERAAWQAEAAQSRWRMVSVNPGLILGPSLTPGSDSGSLFLLDELFKGYFFYGAP-DFSFTTADVRDVAAAHIAAAEHPGAHGRYIVAAQEMTSFHQMSRALLKHHPG 281          
BLAST of NO27G00560 vs. NCBI_GenBank
Match: WP_085215243.1 (hypothetical protein [Methylomagnum ishizawai] >SMF96348.1 dihydroflavonol-4-reductase [Methylomagnum ishizawai])

HSP 1 Score: 156.8 bits (395), Expect = 1.700e-34
Identity = 121/343 (35.28%), Postives = 158/343 (46.06%), Query Frame = 0
Query:   51 VCVTGCNGYVASELVKQLLEKGYHVRGTVRKLSGLTKEERERRYGSLERLSLXXXXXXXXXXXXXXXXXXXXXXXMKRGGCTLPSSTPTLTLHEADLTVPDSFDEAVKGCTYVFHVASPVVYDAKADPRKDILLPALAGVKNVLSAIQKAREEETDGGREEGGKEGGVTFKRLILTSSTGAVYGGPAAVPKAAAVKEKEGWRGDTEGREEALFTEEDWNEECSLSVLPYYYSKVMAEREGWRKAE-KEGIDLVVVCPSYVWGPPAVKGAGSFNTARLRAILKGEETPW---TFDFPVCDTRDIAAVQIAAAEKQDAHGRFIISSSKTISPSWVIGVVHRRFPG 390
            V VTG +GYVAS +VKQLL++GY VRGTVR L      E + RY  LER +                                P S   +    ADL V  +FD A +GC  V H ASP +     DP++ ++ PALAG  NVL A+QKA               G V  K+++LTSS  A+ G  A                D +   + +FTE DWNE  S    PY YSK +AER  W  A+ ++   LV + P +V GP       S + A LR  L+G    W      F   D RD+AA  +AAA + DA GR I+ S    S   +   + +RFPG
Sbjct:   10 VLVTGASGYVASWIVKQLLDQGYTVRGTVRSL------EAKDRYRHLERAAAAG-----------------------------PGSFQPVA---ADLLVKGAFDAAAQGCEVVIHTASPFLGVGVEDPQRQLIEPALAGTLNVLDAVQKA---------------GSV--KKVVLTSSIAAICGDNA----------------DLQRIPQGIFTEADWNESSSARHQPYPYSKTLAERAAWTVAQGQDRWRLVTINPGFVMGPSLSPRVDSTSIATLRDFLRG-RFAWGVPALAFGAVDVRDVAAAHLAAAFRADAEGRHIVVSEGG-SLLGIAQAIEQRFPG 279          
BLAST of NO27G00560 vs. NCBI_GenBank
Match: WP_029279872.1 (aldehyde reductase [Bacillus indicus] >KEZ50917.1 diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus indicus LMG 22858])

HSP 1 Score: 156.4 bits (394), Expect = 2.200e-34
Identity = 109/326 (33.44%), Postives = 158/326 (48.47%), Query Frame = 0
Query:   50 TVCVTGCNGYVASELVKQLLEKGYHVRGTVRKLSGLTKEERERRYGSLERLSLXXXXXXXXXXXXXXXXXXXXXXXMKRGGCTLPSSTPTLTLHEADLTVPDSFDEAVKGCTYVFHVASPVVYDAKADPRKDILLPALAGVKNVLSAIQKAREEETDGGREEGGKEGGVTFKRLILTSSTGAVYGGPAAVPKAAAVKEKEGWRGDTEGREEALFTEEDWNEECSLSVLPYYYSKVMAEREGWRKAEKEGIDLVVVCPSYVWGPPAVKGAGSFNTARLRAILKG---EETPWTFDFPVCDTRDIAAVQIAAAEKQDAHGRFIISSSK 373
            TV VTG  GYVA+ +VK+LL+ G+ VR TVR  +   K E+ +    +E+                                    S+  LT++EADL    SFDEAVKG  YVFH ASP       D +KD++ PAL G KNVL +++++ E                  KR++LTSS  A++G  A                D EG+    F E+DWN   S+S  PY YSK +AE+  W  A+K+  DLV + P+++ GP   K + S + + +  +LKG      P   +  V D RD+A   + AA  + A GR++IS+ +
Sbjct:    4 TVLVTGGTGYVAAWVVKELLDGGHDVRITVRDAA---KTEKYQHLLDVEQ-----------------------------------QSSGKLTVYEADLLEKGSFDEAVKGTEYVFHTASPFFISGFKDAQKDLIEPALEGTKNVLESVRRSPE-----------------VKRVVLTSSAVAIFGDNA----------------DMEGKSS--FNEQDWNTTSSVSHQPYSYSKTLAEKAAWEMADKQHFDLVTINPTFILGPSLSKRSDSTSISTILDLLKGGFKSGVPNLINGTV-DVRDVAKAHVLAAFTESAKGRYLISNEE 255          
The following BLAST results are available for this feature:
BLAST of NO27G00560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005646737.12.000e-4336.15cinnamyl-alcohol dehydrogenase-like protein [Cocco... [more]
XP_005649263.12.900e-4232.34NAD(P)-binding protein [Coccomyxa subellipsoidea C... [more]
EWM21041.19.400e-4159.70dihydrokaempferol 4-reductase, partial [Nannochlor... [more]
XP_005649576.11.800e-3933.25NAD(P)-binding protein [Coccomyxa subellipsoidea C... [more]
WP_044340585.12.200e-3734.11aldehyde reductase [Bacillus aquimaris][more]
XP_005851647.11.400e-3628.75hypothetical protein CHLNCDRAFT_50112 [Chlorella v... [more]
WP_098351467.11.200e-3534.20aldehyde reductase [Bacillus sp. AFS015802] >PFA68... [more]
WP_054241183.11.700e-3432.17cinnamyl-alcohol dehydrogenase [Actinobacteria bac... [more]
WP_085215243.11.700e-3435.28hypothetical protein [Methylomagnum ishizawai] >SM... [more]
WP_029279872.12.200e-3433.44aldehyde reductase [Bacillus indicus] >KEZ50917.1 ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL058nonsL058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL057nonsL057Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR044ncniR044Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR093ngnoR093Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005048NSK005048Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO27G00560.1NO27G00560.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|212492gene_8645Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO27G00560.1NO27G00560.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO27G00560 ID=NO27G00560|Name=NO27G00560|organism=Nannochloropsis oceanica|type=gene|length=3163bp
GTTGTGATGTCAAAGGAAGGAGGGAGGGAGGGAAGGAGGGTATGAAAGAC
GGTTATGAGATCGCGAGGGATAATTAAAACAAGAAAGGCATGATTTTATA
TTTGCGTGAGCGCAAGCCTCTCTGTGCGGCAACAAGAGGCAACGGGTGGT
GGTTCGGAAGGGAGGGATAGGTCTGTCTTGCCCACTCATTCCCGCCCTCT
CAATGAACCCACATAGGGCCCTCTCAAAATGAGGGAGTAGGAAACAACGC
GGAGAGAACCGTAGGGGTATACGTCAAGGATGGGCAACAAGCAAAGTGTG
CGATAAAGGTGTGGCATATGTATGCATGGCTTTCCACTGCGTGGTTTGTT
CCGTGGGGGGCAGGAGGTGACGACCGCCTGGCCTAGCCACAGACAGGCTG
GAAGAAGCATCCAGGCTGAAGTCCCAAGGCCGATACGCAGGCATGCACAT
AGTTTATAGCGTAAGAGCCATTGCCGCTGCGGCTGCTGCTGCAGCAGCCG
CAGCGGCAGCTGCTGGACACAAGGGGTAAGGGTAGCGTTGTGGTGGTCGG
CCGCCCTAGGCGCGGCAAGCTTCCGTCCTCAAAAGCTGAAAGCAATTACT
CCCTTTGCCCCGACGCCGCGGTGCCGCATCCTTCCGTGCCGACAACAAGC
GTTCAGTGTCGTCTGCGTTGACTGCTTTTGGATTGATGGGATGTTGGTGT
GTGGCTTGTGTGTGGTGTATGCTTTATGCGGAGGGCAAGGAGATATCGGT
CCTTCGCGCCACCTCGTTGCTTTTCGGTTATGCTACAAGATGGGTTGAAC
CCAGCACAGCACCAGAGGTGAGCACAGGGAGACACGTAGGCAACAAAAAG
GTTTATTTAATCCACATGGAGGCAGTCTGAAGCTGAAGCTTTGTGAGGTG
TTCCCCAGGAATGCCCGATTTTCTTTTCATTGACCTCCTCACCCCACCGA
AAGACATCTAAATTTCTGGTTCGACATGAACTTATCTCTTCCTACGACAC
GCCCATGAAGGACACATTTGGTGCCCTACGACGTGGTCCGGAGATCCTTT
TCTGTGCACTCCGACCGCGCCACTCGTCGCCACCTAGCCCCCATCACCTC
CTTTTTCTCCTCCTCGTCGTACCCCAGCACACTCCCGCTTTACATCCCGT
GCCTTGTCCCCCTCTAATCGCTCCTCGTAGTGCCAAGCAATCAAGAAATG
AACCACTCCTCGATCTTCACCTGCTGCCTCCTCCTTTTCTTCACCCTCCT
CACCTCCTCCACCGCCTTCGCCGCCTCTTCCTCCCTGCCATCCTCCCCTG
CGCCCTCCTCTTCCCCGTCCTCCCCCTCATCCTCCCAACCAATCACCGTC
TGCGTCACTGGCTGCAATGGTTACGTTGCCTCCGAATTAGTCAAGCAATT
GTTAGAAAAAGGTTATCACGTTAGGGGGACCGTGAGGAAGCTGAGCGGGT
TGACCAAGGAAGAAAGGGAGAGGCGATATGGCTCCTTGGAACGCCTTTCA
TTACTAGCAGCAGAAGCAGCAGCAGCAGCAACAACAGCAACAACAACAAG
TAGAGAAGAAGGAGAAGGAGGGATGAAAAGAGGGGGGTGTACTTTACCCT
CATCTACCCCCACCCTCACCTTACACGAAGCGGACCTGACCGTGCCCGAC
TCTTTCGACGAGGCCGTAAAAGGCTGCACGTATGTCTTCCATGTCGCCTC
CCCCGTCGTATATGATGCCAAAGCGGATCCCCGCAAAGACATTCTCCTTC
CTGCCCTTGCCGGCGTCAAGAACGTGCTGTCCGCGATCCAGAAGGCACGG
GAAGAGGAGACGGATGGAGGGAGAGAGGAGGGAGGGAAGGAGGGAGGGGT
GACATTCAAAAGGCTAATCTTGACCTCGTCCACTGGTGCGGTGTATGGGG
GGCCAGCGGCGGTGCCCAAGGCAGCAGCAGTAAAAGAGAAGGAGGGATGG
AGGGGGGACACGGAGGGAAGGGAGGAAGCATTGTTCACTGAGGAGGACTG
GAACGAGGAGTGCTCCTTGTCGGTGTTGCCCTACTATTACTCGAAGGTCA
TGGCCGAGAGGGAGGGGTGGAGGAAGGCAGAAAAAGAGgtacgtgcatga
tgtgtgggcttgctggcggtcaagagggagggaaggtctcgcatccatcg
gagaatattgtctgtcatagactcaacatttctatccacgcacctttcct
ccctccctccctccctccctccctccctcccctatttccctccctcagGG
CATCGATCTGGTGGTGGTCTGTCCATCTTACGTCTGGGGTCCCCCGGCGG
TCAAAGGGGCAGGGAGTTTCAATACAGgtacgacgagggagggaggaagt
gagggagtgagggagtgttgaaggatcccttccacttttttgggacacac
gcacactgcacaccgacatccctccctcccttcctcccttcctagCCCGG
CTGCGCGCCATCCTGAAGGGTGAGGAAACTCCTTGGACGTTCGATTTTCC
TGTGTGTGATACCCGGGATATAGCTGCCGTTCAAATCGCTGCCGCAGAGA
AACAAGACGCGCATGGCCGgtacgtcccgtccctccctccctccctccct
ccacctttccttctcctcttccctcatatgtgtatataacatgaatacat
tttttatgtttattaaatagtaagaaaattaaaagaaaaacaaataaata
agtaaaaataaccaaatatataagagcatgaccgtcacattccctccctt
gcttcctccctcagctggatttcctcatcactgctccctccctcctttcc
acccaccctccctcccttcctccctccgccagCTTTATTATTTCGTCTTC
CAAGACGATATCTCCTTCCTGGGTCATTGGCGTTGTTCATCGTCGCTTCC
CAGGACGCTTTCCTCACCTAGGGAAGGAAAGGGGGAAGGAAGGGGGGAAG
GAGGGGGGGAAGGAGGGGGGGAAGGAAGTGAAGAGTAGGAGGGTGTTTGA
TGTCAGCAAGGTGGAGGCGCTGTTAGGGCGGCCGTTGAAGGCCCCGGAAG
AAACGTTGAGGGACATGGTGCAGGCCATGCTGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGGGGAGGAGGAGGAGGGGGAGGTGGCGGCGAGTCCGAGTCA
GAAGGGTGTATGA
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protein sequence of NO27G00560.1

>NO27G00560.1-protein ID=NO27G00560.1-protein|Name=NO27G00560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=475bp
MNHSSIFTCCLLLFFTLLTSSTAFAASSSLPSSPAPSSSPSSPSSSQPIT
VCVTGCNGYVASELVKQLLEKGYHVRGTVRKLSGLTKEERERRYGSLERL
SLLAAEAAAAATTATTTSREEGEGGMKRGGCTLPSSTPTLTLHEADLTVP
DSFDEAVKGCTYVFHVASPVVYDAKADPRKDILLPALAGVKNVLSAIQKA
REEETDGGREEGGKEGGVTFKRLILTSSTGAVYGGPAAVPKAAAVKEKEG
WRGDTEGREEALFTEEDWNEECSLSVLPYYYSKVMAEREGWRKAEKEGID
LVVVCPSYVWGPPAVKGAGSFNTARLRAILKGEETPWTFDFPVCDTRDIA
AVQIAAAEKQDAHGRFIISSSKTISPSWVIGVVHRRFPGRFPHLGKERGK
EGGKEGGKEGGKEVKSRRVFDVSKVEALLGRPLKAPEETLRDMVQAMLEE
EEEEEEEGEEEEGEVAASPSQKGV*
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Synonyms
Publications