NO27G00560, NO27G00560 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO27G00560 vs. NCBI_GenBank
Match: XP_005646737.1 (cinnamyl-alcohol dehydrogenase-like protein [Coccomyxa subellipsoidea C-169] >EIE22193.1 cinnamyl-alcohol dehydrogenase-like protein [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 186.4 bits (472), Expect = 2.000e-43 Identity = 124/343 (36.15%), Postives = 174/343 (50.73%), Query Frame = 0 Query: 48 PITVCVTGCNGYVASELVKQLLEKGYHVRGTVRKLSGLTKEERERRYGSLERLSLXXXXXXXXXXXXXXXXXXXXXXXMKRGGCTLPSSTPTLTLHEADLTVPDSFDEAVKGCTYVFHVASPVVYDAKADPRKDILLPALAGVKNVLSAIQKAREEETDGGREEGGKEGGVTFKRLILTSSTGAVYGGPAAVPKAAAVKEKEGWRGDTEGREEALFTEEDWNEECSL-SVLPYYYSKVMAEREGWRKAEKEGIDLVVVCPSYVWGPPAVKGAGSFNTARLRAILKGEETPWTFDFP-VCDTRDIAAVQIAAAEKQDAHGRFIISSSKTISPSWVIGVVHRRFP 389 PI V VTG G+VA+EL+KQLL KGY+VRGTVR LS K + + G+ LP + L L EA+L SFDE V+G T++FH ASP + DP+KD++ PAL G +NVL++ KA++ T KR++LTSS AA PK +L+TEEDWNE SL + Y+ SK +AE+E WR A++EG+DLV V P++V GP A + L+ I++G+ T P +CD RD+AA + AAE A GR+I+S ++ +++ V+ RFP Sbjct: 5 PIAV-VTGAGGFVATELIKQLLSKGYNVRGTVRSLSDTGKMQHLTKLGN-----------------------------------ALPGN---LELQEANLLQEGSFDEVVRGSTFLFHTASPFFIET-PDPQKDLIDPALKGTQNVLASAAKAKD----------------TLKRVVLTSSVAGANCTYAAPPK-----------------NGSLYTEEDWNETSSLENGQAYHLSKTVAEKEAWRLAKEEGLDLVAVLPNFVLGPVVSSRADGTSVGFLKGIVEGKPVEGT---PLICDVRDVAAAHVLAAETPSASGRYIVSQRTPVTATYLSKVLRERFP 271
BLAST of NO27G00560 vs. NCBI_GenBank
Match: XP_005649263.1 (NAD(P)-binding protein [Coccomyxa subellipsoidea C-169] >EIE24719.1 NAD(P)-binding protein [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 182.6 bits (462), Expect = 2.900e-42 Identity = 130/402 (32.34%), Postives = 188/402 (46.77%), Query Frame = 0 Query: 50 TVCVTGCNGYVASELVKQLLEKGYHVRGTVRKLSGLTKEERERRYGSLERLSLXXXXXXXXXXXXXXXXXXXXXXXMKRGGCTLPSSTPTLTLHEADLTVPDSFDEAVKGCTYVFHVASPVVYDAKADPRKDILLPALAGVKNVLSAIQKAREEETDGGREEGGKEGGVTFKRLILTSSTGAVYGGPAAVPKAAAVKEKEGWRGDTEGREEALFTEEDWNEECSLSVLPYYYSKVMAEREGWRKAEKEGIDLVVVCPSYVWGPPAVKGAGSFNTARLRAIL--KGEE-TPWTFDFPVCDTRDIAAVQIAAAEKQDAHGRFIISSSKTISPSWVIGVVHRRFPGXXXXXXXXXXXXXXXXXXXXXXXXVKSRRVFDVSKVEALLGRPLKAPEETLRDMVQAML 449 T VTG G+VA+E+ +QLLEKGY+VRGTVR L+ + +Y L+ L G LP LTLHEADL SFD+ VKG +VFH ASP + + DP+KD++ PA+ G +NV+ A K+++ T KR+++TSS AA VK ++G + +LFTEEDWN+E SL PY +SK AE+E W +++EG+DLV + P++V GP + + + + KG + PW D RDI + A E A GR+I+S T+S ++ V+ RFP +++V D SKV+ LG L + T DM ++ Sbjct: 4 TAVVTGATGFVATEICRQLLEKGYNVRGTVRSLAS------KEKYSHLQAL-----------------------------GEALPG---VLTLHEADLLAEGSFDDVVKGADFVFHTASPFIREVH-DPQKDLVDPAVKGTRNVVQAAVKSKD----------------TVKRIVVTSSF------------AAVVKSQKG------PQNGSLFTEEDWNDESSLDDQPYRFSKTEAEKEAWAISKREGLDLVTINPTFVLGPVVSSRTDATSIILFKDFVENKGADIIPWQ-----VDVRDIGRAHVLAVEVPTASGRYIVSHDSTLSTKYISEVLSERFP----------------QYQFPSGEDAPAKQVLDNSKVQKELGLQLLPAKFTYIDMATTLI 311
BLAST of NO27G00560 vs. NCBI_GenBank
Match: EWM21041.1 (dihydrokaempferol 4-reductase, partial [Nannochloropsis gaditana]) HSP 1 Score: 177.6 bits (449), Expect = 9.400e-41 Identity = 120/201 (59.70%), Postives = 130/201 (64.68%), Query Frame = 0 Query: 51 VCVTGCNGYVASELVKQLLEKGYHVRGTVRKLSGLTKEERERRYGSLERLSLXXXXXXXXXXXXXXXXXXXXXXXMKRGGCTL-----PSSTPTLTLHEADLTVPDSFDEAVKGCTYVFHVASPVVYDAKADPRKDILLPALAGVKNVLSAIQKAREEETDGGREEGGKEGGVTFKRLILTSSTGAVYGGPAAVPKAAAVK 247 VCVTGCNGYVASELVKQLLE+GY+V GTVRKL LT+EERE +YG L +L XXXXXXXXXXXX RG C LTL EADL P SFD AV+GCTYVFHVASPVVY + ADP D+L PAL GV+NVL AIQ FKRLILTSSTGAVYGGP AVPK+A K Sbjct: 78 VCVTGCNGYVASELVKQLLERGYNVHGTVRKLHKLTEEEREEKYGPLAKLGXXXXXXXXXXXXXRVGRHRKED---SRGSCDEGVGDGEKGRGCLTLFEADLRQPHSFDAAVRGCTYVFHVASPVVYASGADPETDLLEPALEGVRNVLRAIQD--XXXXXXXXXXXXXXXXXXFKRLILTSSTGAVYGGPTAVPKSALEK 273
BLAST of NO27G00560 vs. NCBI_GenBank
Match: XP_005649576.1 (NAD(P)-binding protein [Coccomyxa subellipsoidea C-169] >EIE25032.1 NAD(P)-binding protein [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 173.3 bits (438), Expect = 1.800e-39 Identity = 134/403 (33.25%), Postives = 186/403 (46.15%), Query Frame = 0 Query: 49 ITVCVTGCNGYVASELVKQLLEKGYHVRGTVRKLSGLTKEERERRYGSLERLSLXXXXXXXXXXXXXXXXXXXXXXXMKRGGCTLPSSTPTLTLHEADLTVPDSFDEAVKGCTYVFHVASPVVYDAKADPRKDILLPALAGVKNVLSAIQKAREEETDGGREEGGKEGGVTFKRLILTSSTGAVYGGPAAVPKAAAVKEKEGWRGDTEGREEALFTEEDWNEECSLSVLPYYYSKVMAEREGWRKAEKEGIDLVVVCPSYVWGPPAVKGAGSFNTARLRAILKGEE---TPWTFDFPVCDTRDIAAVQIAAAEKQDAHGRFIISSSKTISPSWVIGVVHRRFPGXXXXXXXXXXXXXXXXXXXXXXXXVKSRRVFDVSKVEALLGRPLKAPEETLRDMVQAML 449 +TV VTG G++A+ELVKQLLEKGY VRGTVR L KEE+ +L+ LP + LTLHEADL SFDE VKG YVFH ASP D +KD++ PA+ G VL ++ K++ G V KR++LTSS AA +K K +G +G+ +FT++DWN+E ++S PY YSK AE+ AEKEG ++ + P++V GP A + + ++ ++ E PW CD RDIA I AAE A GR+I+ + + S++ V+ RFP S +D SKVE LG + +ET DM ++ Sbjct: 3 LTVTVTGATGFIATELVKQLLEKGYDVRGTVRSLK---KEEKVAHLKALD--------------------------------AALPGN---LTLHEADLLEEGSFDEVVKGADYVFHTASPFFMGDSPDAQKDLVDPAVKGTTTVLRSVAKSK--------------GSV--KRVVLTSSV------------AAIMKMK---KGPLKGK---VFTDQDWNDENTVSDGPYMYSKTEAEKAARALAEKEGFEIATIHPAFVMGPVIAARADATSIVTMKGFIEHGEYSFFPWH-----CDVRDIARAHILAAEVPLATGRYIV-AQPPVPTSYLSKVLSERFPQFKFPAGKEDD---------------SSETSYDTSKVEKELGLRMHPLKETYVDMATTLI 312
BLAST of NO27G00560 vs. NCBI_GenBank
Match: WP_044340585.1 (aldehyde reductase [Bacillus aquimaris]) HSP 1 Score: 166.4 bits (420), Expect = 2.200e-37 Identity = 117/343 (34.11%), Postives = 171/343 (49.85%), Query Frame = 0 Query: 50 TVCVTGCNGYVASELVKQLLEKGYHVRGTVRKLSGLTKEERERRYGSLERLSLXXXXXXXXXXXXXXXXXXXXXXXMKRGGCTLPSSTP-TLTLHEADLTVPDSFDEAVKGCTYVFHVASPVVYDAKADPRKDILLPALAGVKNVLSAIQKAREEETDGGREEGGKEGGVTFKRLILTSSTGAVYGGPAAVPKAAAVKEKEGWRGDTEGREEALFTEEDWNEECSLSVLPYYYSKVMAEREGWRKAE-KEGIDLVVVCPSYVWGPPAVKGAGSFNTARLRAILKGEETPWTFDFP--VCDTRDIAAVQIAAAEKQDAHGRFIISSSKTISPSWVIGVVHRRFP 389 TV VTG G+VAS LVK+LLE+G++VR TVR L ++E +Y L+ + SSTP TLTL+EADL SFD+AV G YVFH ASP + + DP K+++ PA G +NVL+++ K++ + KR++LTSS A++G D +G+ FTE+DWN S PY YSK +AE+E W+ + ++ DLV + PS+V GP K S +T+ + + L G D V D RDIA + AA K +A GR+I+S + I+ + + ++ + FP Sbjct: 5 TVLVTGGTGFVASWLVKELLEQGHNVRTTVRSL------QKEEKYQHLK---------------------------------DIESSTPGTLTLYEADLLKEGSFDQAVDGSEYVFHTASPFLINGIKDPEKELVEPAKKGTQNVLTSVNKSK-----------------SVKRVVLTSSVVAIFGDHI----------------DMKGK--PYFTEDDWNTTSSTEHQPYNYSKTLAEKEAWKMMKAQDRWDLVTINPSFVMGPALTKRTDSTSTSTILSFLTGGFKTGVPDLATGVVDVRDIAKAHMLAAFKPEAKGRYILSGGE-ITFTQIAKLIEKNFP 272
BLAST of NO27G00560 vs. NCBI_GenBank
Match: XP_005851647.1 (hypothetical protein CHLNCDRAFT_50112 [Chlorella variabilis] >EFN59545.1 hypothetical protein CHLNCDRAFT_50112 [Chlorella variabilis]) HSP 1 Score: 163.7 bits (413), Expect = 1.400e-36 Identity = 115/400 (28.75%), Postives = 177/400 (44.25%), Query Frame = 0 Query: 50 TVCVTGCNGYVASELVKQLLEKGYHVRGTVRKLSGLTKEERERRYGSLERLSLXXXXXXXXXXXXXXXXXXXXXXXMKRGGCTLPSSTPTLTLHEADLTVPDSFDEAVKGCTYVFHVASPVVYDAKADPRKDILLPALAGVKNVLSAIQKAREEETDGGREEGGKEGGVTFKRLILTSSTGAVYGGP-AAVPKAAAVKEKEGWRGDTEGREEALFTEEDWNEECSLSVLPYYYSKVMAEREGWRKAEKEGIDLVVVCPSYVWGPPAVKGAGSFNTARLRAILKGEETPWTFDFPVCDTRDIAAVQIAAAEKQDAHGRFIISSSKTISPSWVIGVVHRRFPGXXXXXXXXXXXXXXXXXXXXXXXXVKSRRVFDVSKVEALLGRPLKAPEETLRDMVQAML 449 TV VTG GYVA+EL+ QLL KG++VR TVR + K + C + ++ L EADL V +FD A GC YVFH ASP +A DP+ ++ PA+ G +NV+ A+ + + + +R++LTSS A+ G AA PK + ++E DWNE +L Y+ SKV AER W AE+ G+DLV + P ++ GP + + + + ++A L+G T F D RD+A I AAE A GR+I++++ + SPS + + RFP ++ + + S+V+ LG + +ET+ DM ++ Sbjct: 4 TVAVTGGGGYVATELIHQLLAKGFNVRATVRSKADAAK--------------------------------------VAHLTCLATALPGSVELVEADLLVEGAFDAAFAGCRYVFHTASPFFIEA-GDPQAQLVDPAVKGTRNVMQAVARNKAD----------------VRRIVLTSSCAAIKGNANAAAPKVGST-----------------YSEADWNETSTLPAEAYWCSKVQAERAAWELAEQHGLDLVTILPEFIMGPVISRRSDATSFGYMKAWLEG--TAQNFAPVFADVRDVARAHILAAENPAASGRYIVATTHSTSPSTISSWLQERFP----------------EYALADGEEMECTEIINNSRVQGELGLSITPVKETIVDMAATLV 313
BLAST of NO27G00560 vs. NCBI_GenBank
Match: WP_098351467.1 (aldehyde reductase [Bacillus sp. AFS015802] >PFA68148.1 diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus sp. AFS015802]) HSP 1 Score: 160.6 bits (405), Expect = 1.200e-35 Identity = 118/345 (34.20%), Postives = 170/345 (49.28%), Query Frame = 0 Query: 48 PITVCVTGCNGYVASELVKQLLEKGYHVRGTVRKLSGLTKEERERRYGSLERLSLXXXXXXXXXXXXXXXXXXXXXXXMKRGGCTLPSSTP-TLTLHEADLTVPDSFDEAVKGCTYVFHVASPVVYDAKADPRKDILLPALAGVKNVLSAIQKAREEETDGGREEGGKEGGVTFKRLILTSSTGAVYGGPAAVPKAAAVKEKEGWRGDTEGREEALFTEEDWNEECSLSVLPYYYSKVMAEREGWR-KAEKEGIDLVVVCPSYVWGPPAVKGAGSFNTARLRAILKGEETPWTFDFP--VCDTRDIAAVQIAAAEKQDAHGRFIISSSKTISPSWVIGVVHRRFP 389 P TV VTG G+VAS LVK+LLE+G+ VR TVR L ++E +Y L+ + S+TP TLT++EADL SFD+AV+G YVFH ASP + + DP K+++ PA G +NVL+++ KA G V KR++LTSS A++G D +G+ FTE+DWN S PY YSK +AE+E W+ +++ DLV + PS+V GP K S +T+ + + L G D V D RDIA + AA +A GR+I+S + I+ + ++ + FP Sbjct: 3 PSTVLVTGGTGFVASWLVKELLEQGHDVRTTVRSL------QKEEKYQHLK---------------------------------DIESATPGTLTIYEADLLKEGSFDQAVEGSEYVFHTASPFLINGIKDPEKELVEPAKKGTQNVLTSVNKA---------------GSV--KRVVLTSSVVAIFGDHI----------------DMKGKPH--FTEDDWNTTSSKDHQPYNYSKTVAEKEAWKMMKDQDRWDLVTINPSFVMGPALTKRTDSTSTSTILSFLTGGFKTGVPDLATGVVDVRDIAKAHMLAAFTPEAKGRYILSGGE-ITFIEIAKLIEKNFP 272
BLAST of NO27G00560 vs. NCBI_GenBank
Match: WP_054241183.1 (cinnamyl-alcohol dehydrogenase [Actinobacteria bacterium OV320] >KPI27462.1 NAD-dependent epimerase/dehydratase [Actinobacteria bacterium OV320]) HSP 1 Score: 156.8 bits (395), Expect = 1.700e-34 Identity = 111/345 (32.17%), Postives = 161/345 (46.67%), Query Frame = 0 Query: 50 TVCVTGCNGYVASELVKQLLEKGYHVRGTVRKLSGLTKEERERRYGSLERLSLXXXXXXXXXXXXXXXXXXXXXXXMKRGGCTLPSSTPTLTLHEADLTVPDSFDEAVKGCTYVFHVASPVVYDAK-ADPRKDILLPALAGVKNVLSAIQKAREEETDGGREEGGKEGGVTFKRLILTSSTGAVYGGPAAVPKAAAVKEKEGWRGDTEGREEALFTEEDWNEECSLSVLPYYYSKVMAEREGWR-KAEKEGIDLVVVCPSYVWGPPAVKGAGSFNTARLRAILKG---EETPWTFDFPVCDTRDIAAVQIAAAEKQDAHGRFIISSSKTISPSWVIGVVHRRFPG 390 TV VTG +G+VA+ LV+QLLE+GYHV TVR + K R G + L L EADL SFDEA+KGCT VFHVASP + K D R+D++ PALAG +NV+++I++ T +RL+LTS+ GA++G A D ++ +E+ +N ++ PY+Y+K +AER W+ +A + +V V P + GP G+ S + L + KG P F F D RD+AA IAAAE AHGR+I+++ + S + + + PG Sbjct: 9 TVLVTGGSGFVAAHLVQQLLERGYHVHTTVRATANAAKRRPLRALGD--------------------------------------AHPGRLDLFEADLLTEGSFDEAMKGCTVVFHVASPFLMPEKIKDGRRDVVEPALAGTRNVVASIERTE-----------------TVERLVLTSTVGAIFGDYA----------------DVREMDDQTLSEKYFNTTSTVENNPYHYAKTVAERAAWQAEAAQSRWRMVSVNPGLILGPSLTPGSDSGSLFLLDELFKGYFFYGAP-DFSFTTADVRDVAAAHIAAAEHPGAHGRYIVAAQEMTSFHQMSRALLKHHPG 281
BLAST of NO27G00560 vs. NCBI_GenBank
Match: WP_085215243.1 (hypothetical protein [Methylomagnum ishizawai] >SMF96348.1 dihydroflavonol-4-reductase [Methylomagnum ishizawai]) HSP 1 Score: 156.8 bits (395), Expect = 1.700e-34 Identity = 121/343 (35.28%), Postives = 158/343 (46.06%), Query Frame = 0 Query: 51 VCVTGCNGYVASELVKQLLEKGYHVRGTVRKLSGLTKEERERRYGSLERLSLXXXXXXXXXXXXXXXXXXXXXXXMKRGGCTLPSSTPTLTLHEADLTVPDSFDEAVKGCTYVFHVASPVVYDAKADPRKDILLPALAGVKNVLSAIQKAREEETDGGREEGGKEGGVTFKRLILTSSTGAVYGGPAAVPKAAAVKEKEGWRGDTEGREEALFTEEDWNEECSLSVLPYYYSKVMAEREGWRKAE-KEGIDLVVVCPSYVWGPPAVKGAGSFNTARLRAILKGEETPW---TFDFPVCDTRDIAAVQIAAAEKQDAHGRFIISSSKTISPSWVIGVVHRRFPG 390 V VTG +GYVAS +VKQLL++GY VRGTVR L E + RY LER + P S + ADL V +FD A +GC V H ASP + DP++ ++ PALAG NVL A+QKA G V K+++LTSS A+ G A D + + +FTE DWNE S PY YSK +AER W A+ ++ LV + P +V GP S + A LR L+G W F D RD+AA +AAA + DA GR I+ S S + + +RFPG Sbjct: 10 VLVTGASGYVASWIVKQLLDQGYTVRGTVRSL------EAKDRYRHLERAAAAG-----------------------------PGSFQPVA---ADLLVKGAFDAAAQGCEVVIHTASPFLGVGVEDPQRQLIEPALAGTLNVLDAVQKA---------------GSV--KKVVLTSSIAAICGDNA----------------DLQRIPQGIFTEADWNESSSARHQPYPYSKTLAERAAWTVAQGQDRWRLVTINPGFVMGPSLSPRVDSTSIATLRDFLRG-RFAWGVPALAFGAVDVRDVAAAHLAAAFRADAEGRHIVVSEGG-SLLGIAQAIEQRFPG 279
BLAST of NO27G00560 vs. NCBI_GenBank
Match: WP_029279872.1 (aldehyde reductase [Bacillus indicus] >KEZ50917.1 diaminohydroxyphosphoribosylaminopyrimidine deaminase [Bacillus indicus LMG 22858]) HSP 1 Score: 156.4 bits (394), Expect = 2.200e-34 Identity = 109/326 (33.44%), Postives = 158/326 (48.47%), Query Frame = 0 Query: 50 TVCVTGCNGYVASELVKQLLEKGYHVRGTVRKLSGLTKEERERRYGSLERLSLXXXXXXXXXXXXXXXXXXXXXXXMKRGGCTLPSSTPTLTLHEADLTVPDSFDEAVKGCTYVFHVASPVVYDAKADPRKDILLPALAGVKNVLSAIQKAREEETDGGREEGGKEGGVTFKRLILTSSTGAVYGGPAAVPKAAAVKEKEGWRGDTEGREEALFTEEDWNEECSLSVLPYYYSKVMAEREGWRKAEKEGIDLVVVCPSYVWGPPAVKGAGSFNTARLRAILKG---EETPWTFDFPVCDTRDIAAVQIAAAEKQDAHGRFIISSSK 373 TV VTG GYVA+ +VK+LL+ G+ VR TVR + K E+ + +E+ S+ LT++EADL SFDEAVKG YVFH ASP D +KD++ PAL G KNVL +++++ E KR++LTSS A++G A D EG+ F E+DWN S+S PY YSK +AE+ W A+K+ DLV + P+++ GP K + S + + + +LKG P + V D RD+A + AA + A GR++IS+ + Sbjct: 4 TVLVTGGTGYVAAWVVKELLDGGHDVRITVRDAA---KTEKYQHLLDVEQ-----------------------------------QSSGKLTVYEADLLEKGSFDEAVKGTEYVFHTASPFFISGFKDAQKDLIEPALEGTKNVLESVRRSPE-----------------VKRVVLTSSAVAIFGDNA----------------DMEGKSS--FNEQDWNTTSSVSHQPYSYSKTLAEKAAWEMADKQHFDLVTINPTFILGPSLSKRSDSTSISTILDLLKGGFKSGVPNLINGTV-DVRDVAKAHVLAAFTESAKGRYLISNEE 255 The following BLAST results are available for this feature:
BLAST of NO27G00560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO27G00560 ID=NO27G00560|Name=NO27G00560|organism=Nannochloropsis oceanica|type=gene|length=3163bpback to top protein sequence of NO27G00560.1 >NO27G00560.1-protein ID=NO27G00560.1-protein|Name=NO27G00560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=475bpback to top Synonyms
Publications
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