NO27G00440, NO27G00440 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO27G00440 vs. NCBI_GenBank
Match: EWM25706.1 (Membrane associated eicosanoid/glutathione metabolism-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 268.1 bits (684), Expect = 1.900e-68 Identity = 134/178 (75.28%), Postives = 151/178 (84.83%), Query Frame = 0
Query: 1 MPVNLLAVLNE------PNAPLQATAAATLALLVKHIVTVFAQGGARFGAGMRPPEDVCFMPQAGTQSFDGTAKTAEKGNEDKGLKKAKEIEQRWTRIVANDLENIPLGLIIAWGALQSPLSASAHIVLVFSFAVSRVLHTVTYAMGKQPHRAITFFGGLLSVVGLSINGLLGALGKK 173
MP ++LA NE PNAPLQATA A+L LLVKHI+TVF QGGARFGAGMRPPEDVCFMP+AG QSFDGTAK AE+GNEDK LKKA + EQRWTRIVANDLENIPLGLIIAWG+LQSP S AH+VLV +F VSR+LHTVTYA GKQPHRA+ FFGG+L+VVG+ +NG+LGA KK
Sbjct: 1 MPSHVLAAFNENAFLGGPNAPLQATAVASLTLLVKHILTVFVQGGARFGAGMRPPEDVCFMPKAGKQSFDGTAKAAERGNEDKALKKALQNEQRWTRIVANDLENIPLGLIIAWGSLQSPRSPPAHVVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGVLAVVGMGVNGVLGAFAKK 178
BLAST of NO27G00440 vs. NCBI_GenBank
Match: ORY52885.1 (hypothetical protein BCR33DRAFT_711305 [Rhizoclosmatium globosum]) HSP 1 Score: 130.6 bits (327), Expect = 4.800e-27 Identity = 77/158 (48.73%), Postives = 101/158 (63.92%), Query Frame = 0
Query: 18 ATAAATLALLVKHIVTVFAQGGARFGAGMRPPEDVCFMP------QAGT--QSFDGTAKTAEKGNEDKGLKKAKEIEQRWTRIVANDLENIPLGLIIAWGALQSPLSASAHIVLVFSFAVSRVLHTVTYAMGKQPHRAITFFGGLLSVVGLSINGLLG 168
AT+ +TL LL+K T+ QGGARF AG RPPED P +A T Q+F +A+ AE ++ KA+ + RW RIV+NDLENIPLGLIIAW +L + S H +LV FA +RV HT+ YA QPHRA T+ G++SV+GL +NG+ G
Sbjct: 10 ATSLSTLVLLIKFYATLMKQGGARFRAGSRPPEDANAFPDLVKSLKATTVKQTFGVSAEGAEASEKE---LKARMADVRWQRIVSNDLENIPLGLIIAWTSLPTAWSPLLHALLVSLFAAARVGHTIAYAKALQPHRAATWAAGIVSVLGLCLNGVAG 164
BLAST of NO27G00440 vs. NCBI_GenBank
Match: XP_008606051.1 (hypothetical protein SDRG_02253 [Saprolegnia diclina VS20] >EQC40352.1 hypothetical protein SDRG_02253 [Saprolegnia diclina VS20]) HSP 1 Score: 109.8 bits (273), Expect = 8.700e-21 Identity = 65/154 (42.21%), Postives = 87/154 (56.49%), Query Frame = 0
Query: 17 QATAAATLALLVKHIVTVFAQGGARFGAGMRPPED---VCFMPQAGTQSFDGTAKTAEKGNEDKGLKKAKEIEQRWTRIVANDLENIPLGLIIAWGALQSPLSASAHIVLVFSFAVSRVLHTVTYAMGKQPHRAITFFGGLLSVVGLSINGLLG 168
+A A+++ L K +VT QGG RF AG RPPED F P Q+FD A TA A+E + RW RIV NDLENIP+GL++AWGA+QS + + +F +RV HT YA G QPHR + G +V+ +++N L G
Sbjct: 6 KAWVASSVVLYTKCLVTTAIQGGKRFAAGSRPPEDKILTQFNPTKQAQTFDTAAATA----------AAREQDIRWERIVRNDLENIPIGLLVAWGAVQSGGVEAVTTGALGAFTAARVYHTYAYAHGLQPHRGNAWMVGTAAVLVMALNSLYG 149
BLAST of NO27G00440 vs. NCBI_GenBank
Match: OQR88553.1 (hypothetical protein THRCLA_10247 [Thraustotheca clavata]) HSP 1 Score: 109.4 bits (272), Expect = 1.100e-20 Identity = 73/167 (43.71%), Postives = 97/167 (58.08%), Query Frame = 0
Query: 16 LQATAAATLALLVKHIVTVFAQGGARFGAGMRPPED--VCFMPQAGTQSF---DGTAKTAEKGNEDKGLK-----KAKEIEQRWTRIVANDLENIPLGLIIAWGALQS---PLSASAHIVLVFSFAVSRVLHTVTYAMGKQPHRAITFFGGLLS---VVGLSINGLL 167
L+ A T L +K + F QGG RF AG RPPED + + QSF D AK + N K ++ +A E + RW R+V NDLENIP+GL+I+W A+ S PL S I++ F VSRV HT+ YA G QPHRAI + G+LS +VG SI+G++
Sbjct: 7 LKVLIACTGVLAIKFYASTFIQGGKRFAAGTRPPEDQSLSLNKKNQKQSFGVRDPNAKDEDDENTKKPVRVQPPARAIEEDLRWERLVRNDLENIPIGLLISWAAVNSGGNPLVNSGAIIV---FTVSRVAHTIAYAKGVQPHRAIAWTAGVLSTLVLVGNSIHGII 170
BLAST of NO27G00440 vs. NCBI_GenBank
Match: XP_009835803.1 (hypothetical protein H257_10821 [Aphanomyces astaci] >ETV74716.1 hypothetical protein H257_10821 [Aphanomyces astaci]) HSP 1 Score: 107.8 bits (268), Expect = 3.300e-20 Identity = 69/158 (43.67%), Postives = 90/158 (56.96%), Query Frame = 0
Query: 22 ATLALLVKHIVTVFAQGGARFGAGMRPPEDVCFM---PQAGTQSFDGTAKTAE-KGNEDK---GLK-----KAKEIEQRWTRIVANDLENIPLGLIIAWGALQSPLSASAHIVLVFSFAVSRVLHTVTYAMGKQPHRAITFFGGLLSVVGLSINGLLG 168
AT L +K +T+ QGG RF AG RPPED P Q+F + AE K ++DK GL+ +A E + RW RIV NDLENIP+GL+ AW A+ S S + + + +F V R+LHT+ Y QPHR I +FGG+LSV L N G
Sbjct: 13 ATGVLCLKLYLTLLIQGGKRFAAGTRPPEDQILKSLNPTKQRQAFGVFDEAAEAKKSDDKPTSGLREKPSARAVEADIRWERIVRNDLENIPIGLLTAWAAVNSGGSVAVNAGAIAAFTVFRILHTIAYVKQLQPHRGILWFGGVLSVFTLVGNSFYG 170
BLAST of NO27G00440 vs. NCBI_GenBank
Match: XP_008868514.1 (hypothetical protein H310_05552 [Aphanomyces invadans] >ETW03130.1 hypothetical protein H310_05552 [Aphanomyces invadans]) HSP 1 Score: 107.5 bits (267), Expect = 4.300e-20 Identity = 69/158 (43.67%), Postives = 86/158 (54.43%), Query Frame = 0
Query: 22 ATLALLVKHIVTVFAQGGARFGAGMRPPED---VCFMPQAGTQSFD-----GTAKTAE----KGNEDKGLKKAKEIEQRWTRIVANDLENIPLGLIIAWGALQSPLSASAHIVLVFSFAVSRVLHTVTYAMGKQPHRAITFFGGLLSVVGLSINGLLG 168
AT L +K VT+ QGG RF AG RPPED F P Q+F AK +E G +K +A E + RW RIV NDLENIP+GL+ AW A+ S + + + +F + RVLHT YA QPHR +FGG+LSVV L N G
Sbjct: 13 ATGILCIKLYVTLMIQGGKRFAAGTRPPEDQMLKMFNPSKQRQTFGVVDHAAAAKKSEDKPASGLREKPTDRAVEDDIRWERIVRNDLENIPIGLLTAWAAVNSGGNVVVNTGAIAAFTLFRVLHTYAYAKQLQPHRGYIWFGGVLSVVTLVGNSFYG 170
BLAST of NO27G00440 vs. NCBI_GenBank
Match: OQR90357.1 (hypothetical protein ACHHYP_05607 [Achlya hypogyna]) HSP 1 Score: 106.7 bits (265), Expect = 7.400e-20 Identity = 72/161 (44.72%), Postives = 91/161 (56.52%), Query Frame = 0
Query: 21 AATLALLVKHIVTVFAQGGARFGAGMRPPED---VCFMPQAGTQSF---DGTAKTAEKGNEDKGLK-----KAKEIEQRWTRIVANDLENIPLGLIIAWGALQS---PLSASAHIVLVFSFAVSRVLHTVTYAMGKQPHRAITFFGGLLSVVGLSINGLLG 168
AAT L VK ++ QGG RF AG RPPED F P+ QSF D AK AE+ + K LK +A E + RW R+V NDLENIP+GL+ AW A+ S PL SA IV+ F + RV HT YA QPHRA + G+ ++ L N ++G
Sbjct: 12 AATAVLTVKFYISTMIQGGKRFAAGTRPPEDQILTDFNPKNQKQSFGLRDPNAK-AEEDDAKKPLKLTPSARAIEADLRWERLVRNDLENIPIGLLAAWAAVNSGGNPLVNSAAIVI---FTIGRVAHTFAYANSLQPHRAYAWMAGVFGIMVLVGNSVVG 168
BLAST of NO27G00440 vs. NCBI_GenBank
Match: XP_012203768.1 (hypothetical protein SPRG_20662 [Saprolegnia parasitica CBS 223.65] >KDO25539.1 hypothetical protein SPRG_20662 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 105.9 bits (263), Expect = 1.300e-19 Identity = 64/156 (41.03%), Postives = 85/156 (54.49%), Query Frame = 0
Query: 17 QATAAATLALLVKHIVTVFAQGGARFGAGMRPPEDVCF-----MPQAGTQSFDGTAKTAEKGNEDKGLKKAKEIEQRWTRIVANDLENIPLGLIIAWGALQSPLSASAHIVLVFSFAVSRVLHTVTYAMGKQPHRAITFFGGLLSVVGLSINGLLG 168
+A A+++ L K ++T QGG RF AG RPPED F QA T D A T A+E + RW RIV NDLENIP+GLI+AWGA+QS + + +F +RV HT YA G QPHR + G +V+ +++N L G
Sbjct: 6 KAWVASSVVLYTKCLLTTAIQGGKRFAAGSRPPEDKIFKQFNPTKQAQTFGVDTAAATT----------AAREQDIRWERIVRNDLENIPIGLIVAWGAVQSGGVEAVTTCALGTFTAARVYHTYAYAQGLQPHRGNAWMVGTAAVLVMALNSLYG 151
BLAST of NO27G00440 vs. NCBI_GenBank
Match: AIG56255.1 (secreted protein [Achlya hypogyna] >OQR86661.1 hypothetical protein ACHHYP_10301 [Achlya hypogyna]) HSP 1 Score: 105.1 bits (261), Expect = 2.200e-19 Identity = 64/153 (41.83%), Postives = 85/153 (55.56%), Query Frame = 0
Query: 17 QATAAATLALLVKHIVTVFAQGGARFGAGMRPPEDVCFMPQAGTQSFDGTAKTAEKGNEDKGLKKAKEIEQ--RWTRIVANDLENIPLGLIIAWGALQSPLSASAHIVLVFSFAVSRVLHTVTYAMGKQPHRAITFFGGLLSVVGLSINGLLG 168
QA +++ L K + QGG RF AG RPPED F + F+ T K A+ DK A +EQ RW RIV NDLENIP+GL++AWG++QS + + +F +RV HT YA G QPHR + G+ SV L++N L G
Sbjct: 6 QAWVVSSVVLYAKCLGAAMIQGGKRFAAGSRPPEDKIF------RKFNPT-KQAQSFGVDKTAVSATALEQDIRWERIVRNDLENIPMGLLVAWGSVQSGGCDAVTAAAIATFTAARVYHTYAYAQGLQPHRGNAWLLGVASVGVLALNSLYG 151
BLAST of NO27G00440 vs. NCBI_GenBank
Match: OQR95843.1 (hypothetical protein THRCLA_07520 [Thraustotheca clavata]) HSP 1 Score: 102.8 bits (255), Expect = 1.100e-18 Identity = 63/152 (41.45%), Postives = 83/152 (54.61%), Query Frame = 0
Query: 17 QATAAATLALLVKHIVTVFAQGGARFGAGMRPPEDVCFMPQAGTQSFDGTAKTAEKGNEDKGLKKAK-EIEQRWTRIVANDLENIPLGLIIAWGALQSPLSASAHIVLVFSFAVSRVLHTVTYAMGKQPHRAITFFGGLLSVVGLSINGLLG 168
+A +T L K I T QGG RF AG RPPED F + ++ T + G E G+ A E + RW RIV NDLENIP+GL++AWGA+QS + + +F +R+ HT YA G QPHR + G SV L++N L G
Sbjct: 6 KAWITSTAVLYAKFIFTSTIQGGKRFAAGTRPPEDKIF------KQYNKTNQLQSFGVEKTGVNAAALEEDIRWQRIVRNDLENIPIGLLVAWGAVQSGGFEAVTTSAIATFTAARLFHTYAYANGLQPHRGYAWALGAASVGVLALNSLYG 151 The following BLAST results are available for this feature:
BLAST of NO27G00440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO27G00440 ID=NO27G00440|Name=NO27G00440|organism=Nannochloropsis oceanica|type=gene|length=1818bpback to top protein sequence of NO27G00440.1 >NO27G00440.1-protein ID=NO27G00440.1-protein|Name=NO27G00440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=173bpback to top Synonyms
Publications
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