NO27G00440, NO27G00440 (gene) Nannochloropsis oceanica

Overview
NameNO27G00440
Unique NameNO27G00440
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1818
Alignment locationchr27:164172..165989 +

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Properties
Property NameValue
DescriptionMembrane associated eicosanoid/glutathione metabolism-like domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr27genomechr27:164172..165989 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023352MAPEG-like_dom
IPR001129Membr-assoc_MAPEG
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO27G00440 vs. NCBI_GenBank
Match: EWM25706.1 (Membrane associated eicosanoid/glutathione metabolism-like domain protein [Nannochloropsis gaditana])

HSP 1 Score: 268.1 bits (684), Expect = 1.900e-68
Identity = 134/178 (75.28%), Postives = 151/178 (84.83%), Query Frame = 0
Query:    1 MPVNLLAVLNE------PNAPLQATAAATLALLVKHIVTVFAQGGARFGAGMRPPEDVCFMPQAGTQSFDGTAKTAEKGNEDKGLKKAKEIEQRWTRIVANDLENIPLGLIIAWGALQSPLSASAHIVLVFSFAVSRVLHTVTYAMGKQPHRAITFFGGLLSVVGLSINGLLGALGKK 173
            MP ++LA  NE      PNAPLQATA A+L LLVKHI+TVF QGGARFGAGMRPPEDVCFMP+AG QSFDGTAK AE+GNEDK LKKA + EQRWTRIVANDLENIPLGLIIAWG+LQSP S  AH+VLV +F VSR+LHTVTYA GKQPHRA+ FFGG+L+VVG+ +NG+LGA  KK
Sbjct:    1 MPSHVLAAFNENAFLGGPNAPLQATAVASLTLLVKHILTVFVQGGARFGAGMRPPEDVCFMPKAGKQSFDGTAKAAERGNEDKALKKALQNEQRWTRIVANDLENIPLGLIIAWGSLQSPRSPPAHVVLVLAFTVSRILHTVTYAAGKQPHRALAFFGGVLAVVGMGVNGVLGAFAKK 178          
BLAST of NO27G00440 vs. NCBI_GenBank
Match: ORY52885.1 (hypothetical protein BCR33DRAFT_711305 [Rhizoclosmatium globosum])

HSP 1 Score: 130.6 bits (327), Expect = 4.800e-27
Identity = 77/158 (48.73%), Postives = 101/158 (63.92%), Query Frame = 0
Query:   18 ATAAATLALLVKHIVTVFAQGGARFGAGMRPPEDVCFMP------QAGT--QSFDGTAKTAEKGNEDKGLKKAKEIEQRWTRIVANDLENIPLGLIIAWGALQSPLSASAHIVLVFSFAVSRVLHTVTYAMGKQPHRAITFFGGLLSVVGLSINGLLG 168
            AT+ +TL LL+K   T+  QGGARF AG RPPED    P      +A T  Q+F  +A+ AE   ++    KA+  + RW RIV+NDLENIPLGLIIAW +L +  S   H +LV  FA +RV HT+ YA   QPHRA T+  G++SV+GL +NG+ G
Sbjct:   10 ATSLSTLVLLIKFYATLMKQGGARFRAGSRPPEDANAFPDLVKSLKATTVKQTFGVSAEGAEASEKE---LKARMADVRWQRIVSNDLENIPLGLIIAWTSLPTAWSPLLHALLVSLFAAARVGHTIAYAKALQPHRAATWAAGIVSVLGLCLNGVAG 164          
BLAST of NO27G00440 vs. NCBI_GenBank
Match: XP_008606051.1 (hypothetical protein SDRG_02253 [Saprolegnia diclina VS20] >EQC40352.1 hypothetical protein SDRG_02253 [Saprolegnia diclina VS20])

HSP 1 Score: 109.8 bits (273), Expect = 8.700e-21
Identity = 65/154 (42.21%), Postives = 87/154 (56.49%), Query Frame = 0
Query:   17 QATAAATLALLVKHIVTVFAQGGARFGAGMRPPED---VCFMPQAGTQSFDGTAKTAEKGNEDKGLKKAKEIEQRWTRIVANDLENIPLGLIIAWGALQSPLSASAHIVLVFSFAVSRVLHTVTYAMGKQPHRAITFFGGLLSVVGLSINGLLG 168
            +A  A+++ L  K +VT   QGG RF AG RPPED     F P    Q+FD  A TA           A+E + RW RIV NDLENIP+GL++AWGA+QS    +     + +F  +RV HT  YA G QPHR   +  G  +V+ +++N L G
Sbjct:    6 KAWVASSVVLYTKCLVTTAIQGGKRFAAGSRPPEDKILTQFNPTKQAQTFDTAAATA----------AAREQDIRWERIVRNDLENIPIGLLVAWGAVQSGGVEAVTTGALGAFTAARVYHTYAYAHGLQPHRGNAWMVGTAAVLVMALNSLYG 149          
BLAST of NO27G00440 vs. NCBI_GenBank
Match: OQR88553.1 (hypothetical protein THRCLA_10247 [Thraustotheca clavata])

HSP 1 Score: 109.4 bits (272), Expect = 1.100e-20
Identity = 73/167 (43.71%), Postives = 97/167 (58.08%), Query Frame = 0
Query:   16 LQATAAATLALLVKHIVTVFAQGGARFGAGMRPPED--VCFMPQAGTQSF---DGTAKTAEKGNEDKGLK-----KAKEIEQRWTRIVANDLENIPLGLIIAWGALQS---PLSASAHIVLVFSFAVSRVLHTVTYAMGKQPHRAITFFGGLLS---VVGLSINGLL 167
            L+   A T  L +K   + F QGG RF AG RPPED  +    +   QSF   D  AK  +  N  K ++     +A E + RW R+V NDLENIP+GL+I+W A+ S   PL  S  I++   F VSRV HT+ YA G QPHRAI +  G+LS   +VG SI+G++
Sbjct:    7 LKVLIACTGVLAIKFYASTFIQGGKRFAAGTRPPEDQSLSLNKKNQKQSFGVRDPNAKDEDDENTKKPVRVQPPARAIEEDLRWERLVRNDLENIPIGLLISWAAVNSGGNPLVNSGAIIV---FTVSRVAHTIAYAKGVQPHRAIAWTAGVLSTLVLVGNSIHGII 170          
BLAST of NO27G00440 vs. NCBI_GenBank
Match: XP_009835803.1 (hypothetical protein H257_10821 [Aphanomyces astaci] >ETV74716.1 hypothetical protein H257_10821 [Aphanomyces astaci])

HSP 1 Score: 107.8 bits (268), Expect = 3.300e-20
Identity = 69/158 (43.67%), Postives = 90/158 (56.96%), Query Frame = 0
Query:   22 ATLALLVKHIVTVFAQGGARFGAGMRPPEDVCFM---PQAGTQSFDGTAKTAE-KGNEDK---GLK-----KAKEIEQRWTRIVANDLENIPLGLIIAWGALQSPLSASAHIVLVFSFAVSRVLHTVTYAMGKQPHRAITFFGGLLSVVGLSINGLLG 168
            AT  L +K  +T+  QGG RF AG RPPED       P    Q+F    + AE K ++DK   GL+     +A E + RW RIV NDLENIP+GL+ AW A+ S  S + +   + +F V R+LHT+ Y    QPHR I +FGG+LSV  L  N   G
Sbjct:   13 ATGVLCLKLYLTLLIQGGKRFAAGTRPPEDQILKSLNPTKQRQAFGVFDEAAEAKKSDDKPTSGLREKPSARAVEADIRWERIVRNDLENIPIGLLTAWAAVNSGGSVAVNAGAIAAFTVFRILHTIAYVKQLQPHRGILWFGGVLSVFTLVGNSFYG 170          
BLAST of NO27G00440 vs. NCBI_GenBank
Match: XP_008868514.1 (hypothetical protein H310_05552 [Aphanomyces invadans] >ETW03130.1 hypothetical protein H310_05552 [Aphanomyces invadans])

HSP 1 Score: 107.5 bits (267), Expect = 4.300e-20
Identity = 69/158 (43.67%), Postives = 86/158 (54.43%), Query Frame = 0
Query:   22 ATLALLVKHIVTVFAQGGARFGAGMRPPED---VCFMPQAGTQSFD-----GTAKTAE----KGNEDKGLKKAKEIEQRWTRIVANDLENIPLGLIIAWGALQSPLSASAHIVLVFSFAVSRVLHTVTYAMGKQPHRAITFFGGLLSVVGLSINGLLG 168
            AT  L +K  VT+  QGG RF AG RPPED     F P    Q+F        AK +E     G  +K   +A E + RW RIV NDLENIP+GL+ AW A+ S  +   +   + +F + RVLHT  YA   QPHR   +FGG+LSVV L  N   G
Sbjct:   13 ATGILCIKLYVTLMIQGGKRFAAGTRPPEDQMLKMFNPSKQRQTFGVVDHAAAAKKSEDKPASGLREKPTDRAVEDDIRWERIVRNDLENIPIGLLTAWAAVNSGGNVVVNTGAIAAFTLFRVLHTYAYAKQLQPHRGYIWFGGVLSVVTLVGNSFYG 170          
BLAST of NO27G00440 vs. NCBI_GenBank
Match: OQR90357.1 (hypothetical protein ACHHYP_05607 [Achlya hypogyna])

HSP 1 Score: 106.7 bits (265), Expect = 7.400e-20
Identity = 72/161 (44.72%), Postives = 91/161 (56.52%), Query Frame = 0
Query:   21 AATLALLVKHIVTVFAQGGARFGAGMRPPED---VCFMPQAGTQSF---DGTAKTAEKGNEDKGLK-----KAKEIEQRWTRIVANDLENIPLGLIIAWGALQS---PLSASAHIVLVFSFAVSRVLHTVTYAMGKQPHRAITFFGGLLSVVGLSINGLLG 168
            AAT  L VK  ++   QGG RF AG RPPED     F P+   QSF   D  AK AE+ +  K LK     +A E + RW R+V NDLENIP+GL+ AW A+ S   PL  SA IV+   F + RV HT  YA   QPHRA  +  G+  ++ L  N ++G
Sbjct:   12 AATAVLTVKFYISTMIQGGKRFAAGTRPPEDQILTDFNPKNQKQSFGLRDPNAK-AEEDDAKKPLKLTPSARAIEADLRWERLVRNDLENIPIGLLAAWAAVNSGGNPLVNSAAIVI---FTIGRVAHTFAYANSLQPHRAYAWMAGVFGIMVLVGNSVVG 168          
BLAST of NO27G00440 vs. NCBI_GenBank
Match: XP_012203768.1 (hypothetical protein SPRG_20662 [Saprolegnia parasitica CBS 223.65] >KDO25539.1 hypothetical protein SPRG_20662 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 105.9 bits (263), Expect = 1.300e-19
Identity = 64/156 (41.03%), Postives = 85/156 (54.49%), Query Frame = 0
Query:   17 QATAAATLALLVKHIVTVFAQGGARFGAGMRPPEDVCF-----MPQAGTQSFDGTAKTAEKGNEDKGLKKAKEIEQRWTRIVANDLENIPLGLIIAWGALQSPLSASAHIVLVFSFAVSRVLHTVTYAMGKQPHRAITFFGGLLSVVGLSINGLLG 168
            +A  A+++ L  K ++T   QGG RF AG RPPED  F       QA T   D  A T            A+E + RW RIV NDLENIP+GLI+AWGA+QS    +     + +F  +RV HT  YA G QPHR   +  G  +V+ +++N L G
Sbjct:    6 KAWVASSVVLYTKCLLTTAIQGGKRFAAGSRPPEDKIFKQFNPTKQAQTFGVDTAAATT----------AAREQDIRWERIVRNDLENIPIGLIVAWGAVQSGGVEAVTTCALGTFTAARVYHTYAYAQGLQPHRGNAWMVGTAAVLVMALNSLYG 151          
BLAST of NO27G00440 vs. NCBI_GenBank
Match: AIG56255.1 (secreted protein [Achlya hypogyna] >OQR86661.1 hypothetical protein ACHHYP_10301 [Achlya hypogyna])

HSP 1 Score: 105.1 bits (261), Expect = 2.200e-19
Identity = 64/153 (41.83%), Postives = 85/153 (55.56%), Query Frame = 0
Query:   17 QATAAATLALLVKHIVTVFAQGGARFGAGMRPPEDVCFMPQAGTQSFDGTAKTAEKGNEDKGLKKAKEIEQ--RWTRIVANDLENIPLGLIIAWGALQSPLSASAHIVLVFSFAVSRVLHTVTYAMGKQPHRAITFFGGLLSVVGLSINGLLG 168
            QA   +++ L  K +     QGG RF AG RPPED  F      + F+ T K A+    DK    A  +EQ  RW RIV NDLENIP+GL++AWG++QS    +     + +F  +RV HT  YA G QPHR   +  G+ SV  L++N L G
Sbjct:    6 QAWVVSSVVLYAKCLGAAMIQGGKRFAAGSRPPEDKIF------RKFNPT-KQAQSFGVDKTAVSATALEQDIRWERIVRNDLENIPMGLLVAWGSVQSGGCDAVTAAAIATFTAARVYHTYAYAQGLQPHRGNAWLLGVASVGVLALNSLYG 151          
BLAST of NO27G00440 vs. NCBI_GenBank
Match: OQR95843.1 (hypothetical protein THRCLA_07520 [Thraustotheca clavata])

HSP 1 Score: 102.8 bits (255), Expect = 1.100e-18
Identity = 63/152 (41.45%), Postives = 83/152 (54.61%), Query Frame = 0
Query:   17 QATAAATLALLVKHIVTVFAQGGARFGAGMRPPEDVCFMPQAGTQSFDGTAKTAEKGNEDKGLKKAK-EIEQRWTRIVANDLENIPLGLIIAWGALQSPLSASAHIVLVFSFAVSRVLHTVTYAMGKQPHRAITFFGGLLSVVGLSINGLLG 168
            +A   +T  L  K I T   QGG RF AG RPPED  F      + ++ T +    G E  G+  A  E + RW RIV NDLENIP+GL++AWGA+QS    +     + +F  +R+ HT  YA G QPHR   +  G  SV  L++N L G
Sbjct:    6 KAWITSTAVLYAKFIFTSTIQGGKRFAAGTRPPEDKIF------KQYNKTNQLQSFGVEKTGVNAAALEEDIRWQRIVRNDLENIPIGLLVAWGAVQSGGFEAVTTSAIATFTAARLFHTYAYANGLQPHRGYAWALGAASVGVLALNSLYG 151          
The following BLAST results are available for this feature:
BLAST of NO27G00440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25706.11.900e-6875.28Membrane associated eicosanoid/glutathione metabol... [more]
ORY52885.14.800e-2748.73hypothetical protein BCR33DRAFT_711305 [Rhizoclosm... [more]
XP_008606051.18.700e-2142.21hypothetical protein SDRG_02253 [Saprolegnia dicli... [more]
OQR88553.11.100e-2043.71hypothetical protein THRCLA_10247 [Thraustotheca c... [more]
XP_009835803.13.300e-2043.67hypothetical protein H257_10821 [Aphanomyces astac... [more]
XP_008868514.14.300e-2043.67hypothetical protein H310_05552 [Aphanomyces invad... [more]
OQR90357.17.400e-2044.72hypothetical protein ACHHYP_05607 [Achlya hypogyna... [more]
XP_012203768.11.300e-1941.03hypothetical protein SPRG_20662 [Saprolegnia paras... [more]
AIG56255.12.200e-1941.83secreted protein [Achlya hypogyna] >OQR86661.1 hyp... [more]
OQR95843.11.100e-1841.45hypothetical protein THRCLA_07520 [Thraustotheca c... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL058nonsL058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL057nonsL057Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR063ncniR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR044ncniR044Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR093ngnoR093Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO27G00440.1NO27G00440.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|609001gene_10149Nannochloropsis oceanica (N. oceanica CCMP1779)gene
jgi.p|Nanoce1779_2|603390gene_8625Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO27G00440.1NO27G00440.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO27G00440 ID=NO27G00440|Name=NO27G00440|organism=Nannochloropsis oceanica|type=gene|length=1818bp
ATTTAATTTTAATTGACAATCCCTTCGCAGCATTTCGTGATGCTTCTATT
ATATTGACTTTGCTTCGCTGTATAATAGGTGAAGGGAGCAAGCAGTAGCT
GTTCGAGTGGGTATAACGAGGCGGTAAAACTACTTTCCTTTAAATCTCCA
GTCTAGTTTTTGCTTATCAATGTCACTCTGTTGATGTCAAATTTTGACTG
GCACACACCTGTAGTGGTTTATGGTACAGAAATATAAGGCAATTGCTTGT
CTTCTTGCTTTTGTTTGGCCCACCAAATCCTTTTTATGACTGACCGCGTG
CCCCGCGCAGGATAGAAAGTATTGTTTCCTAATCGTTGCATACTGAAGCT
AGGTCTGGATGCAGCAGTGTCAATCGGCAGCGTCCCAGTACGCAATGTGC
CGAGGGACGAACAATACACGGCTCTTCAACAGCGAGGTCAACCGACTCTC
CACGCACCGGCCTGCTGAACTTGCCCTCGCCTTGTGATGCTTTCGAAGTT
CACAGTGAGCCATGCACACCTTCTTTCGATCGACCACATCTAGCTGGCTA
CTTGTCGGCGTGTTAACGAGGCAACGGCTACTCCTGCCGCTCAAGATCAA
CCCAACCTCCTCATGACATACTCCCTCCCCTTACCTCTCACTTGACAGAA
CTTCTGAAGGCGTCATGCCCGTCAATCTCCTCGCGGTGCTCAACGAGCCC
AATGCACCCCTTCAAGCCACGGCCGCCGCGACGCTGGCCTTACTGGTCAA
GCACATTGTCACCGTGTTTGCACAGGGAGGCGCGCGCTTCGGGGCGGGGA
TGCGCCCGCCTGAAGACGTGTGTTTTATGCCCCAAGCCGGGACGCAGTCT
TTCGATGGTACTGCCAAGACGGCAGAAAAAGGGAATGAGGATAAAGGTTT
GAAGAAGGCAAAGGAGATTGAGCAACGCTGGACGCGTATCGTCGCGAATG
ATTTGGAGAACATTCCGCTGgtacgtcttttccccctccatcgtctcctt
cgcctgctttccttttacgctcatctagtacgtcccgatcccgatgatca
tacagaaaaattaattggcatgctatcatctgcacaaacttatattttct
cccttctttgtctttgtttggggcttttccctccctcatcccctcctttc
catcctctctcgttgaatgggcctgttcattgctctagcccctcctctcc
actcctatgaacattaaccttgtctttcttttcgtcacgctccttttttt
catactcttattctccccctcccccttctgccttagGGTTTGATCATTGC
TTGGGGCGCACTTCAATCTCCCCTCTCCGCTTCTGCGCATATCGTCCTCG
TCTTCTCCTTCGCCGTTTCCCGAGTCCTGCATACCGTGACATATGCAATG
GGAAAGCAACCTCATCGTGCCATCACGTTTTTTGGGGGGCTCTTATCGGT
GGTGGGACTGAGCATCAATGGTTTGCTAGGCGCGCTGGGGAAGAAGTAGG
AGAATAGATTCTCCCTCCCTTGCTCCCTCCCTCTCTCGCTCCCTTGCTTT
CTCCCTTCCTTATTTCTTACTTTCTTTTCTCAGATTAAGGCAGGACGACA
ATGAATGAATACGTTCGAAAAGAAAGGAAAAAGCGAAGCGAAGTGAGCGG
CCTCTCGGTAACACGCGTATCCCCATCTTTGCTAATTTCGCTTTCCCTAT
TCCTGTGTGGGTACATTGACTGGTTCTTACACCGCTGAATAAAGAAAGGG
GCGAGGGATGAACGGAGCAAGGAAGAAGAGGAAAGGAGAGAATTAGAAAA
AAGAGATAAAGTGATGAT
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protein sequence of NO27G00440.1

>NO27G00440.1-protein ID=NO27G00440.1-protein|Name=NO27G00440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=173bp
MPVNLLAVLNEPNAPLQATAAATLALLVKHIVTVFAQGGARFGAGMRPPE
DVCFMPQAGTQSFDGTAKTAEKGNEDKGLKKAKEIEQRWTRIVANDLENI
PLGLIIAWGALQSPLSASAHIVLVFSFAVSRVLHTVTYAMGKQPHRAITF
FGGLLSVVGLSINGLLGALGKK*
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Synonyms
Publications