NO27G00410, NO27G00410 (gene) Nannochloropsis oceanica

Overview
NameNO27G00410
Unique NameNO27G00410
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2146
Alignment locationchr27:154537..156682 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr27genomechr27:154537..156682 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO27G00410 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL057nonsL057Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR063ncniR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR093ngnoR093Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO27G00410.1NO27G00410.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO27G00410.1NO27G00410.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO27G00410 ID=NO27G00410|Name=NO27G00410|organism=Nannochloropsis oceanica|type=gene|length=2146bp
CTTCCTCCTCTTCCTCCTCTTCCTCCTCTTCCTCCTCCTCCTCCTCTTCC
TCGAATCAAATTCTCCGTCGTCCTCTCTCCATTCCCCCCCCTTCCCCGCC
CAACCCTCCCTCCTCCTTCCCTCCTTCCTCCGCTCCCTCAACGACGGCAT
CTCCTTCTTCTGCGGCTTCGTCTCTTTAGGCCCGTCGGCCCAATATCTCC
ACTTTGTCAACCCACCCTTCTCCATCGCGTCCTCCCTCCCTTCCTCGCGC
CTCGATGCCCTCTTCCGCCAACCTCCTCCCTCCCACCCTGGCCTGGTGCC
CGTTTTATGGGCAGATTTCCTCCTTCCCTCCTTCCGTCCCGCTTTCCTCT
CCTCCCTCCTCACTTACCTCCTTTCTCCGCCAACGCGGGGACAGGAGATG
TCGAGCTGCGTCAAAGTGAGGCAGGGAGGGAGGGAGGGGGGGACGGACGG
GGGGAGATTGTGCTTGGCGAGGGCGAGACAGATATTGTTGGGGGAAGGGA
GTTATTGGGCCGTGGCCGTTTCGTTCACTCTACTCCCGAAGGGGCTAGCG
TTGGAGATGGAAGAGGAGGGAGGGATGGAGGAAGGGGGGGAGGAGCAAAG
AGGGCTGGTCTCGGTGGAGGGAGGGAGGGAGGGAGGGAGGGAGGATAAGG
GGAGGGATGGAGCGTCCAACGCATTTGCACCTGAGGAGGTAATGTCGGTC
TTGGAACATATTTTAGGGAAACAGGAAGTGGAGGAGGGAGGGAGGGGGTT
AGGAAGGGAGGGAGGATGGTTGAAGGGGGAAAGTCCTTTGTCGTCCTCGC
CGTTGGCCTTTTTAAATTCAAATGTGACAAATGCGGAGGGGGAAGGGCAG
CAGAAGAAGAGGAGGGGAAAGGCAGCGGCGGTGACGGAGGAGGGTGAGTT
AAGGACGAAAGGATGGAATGTGGTAAGGACATCAAGACAGGGGAGCTCGA
GAGAGGCAGCAGCAGTTGGAGTAGCAAGAGCAGCGGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGAAGGAGGAGAAGGAGGAGA
AGGAGGAGAAGAAGAAGAAGGAGAAGGAGGAGGAGTCATTGAAAGTTTTT
ATCCTCCAGCACACGCAGGCTTCTCGCGTGCTCCCACTTATTCTTCCTCC
TCGTCCTCATCCTCGTCCTCCTCCTTCTCCTCCTCCTTTTCATCCTCCTT
CTCAACGTCTCCTCCCTTCCAACCCCCCCTCCCTTCTCCCTCCCTCCCTC
CCCCTTCTCATGCTGGTCCTCCTACCCACCGTTCTGCCATTGCTCTCCCT
TCTTCCCTCCCTCCCCCTCATCCTACCCCCTCACTTCCAGTGGGGCCACC
TCCCAAGCTCGCGACAGGATTCAAAATATGGTTGCAGCAGgtagggaggg
agggaagaagggagggagggagggaaaggaagataaattgaggggcagtg
aagtgaaatagccttctcgtgttcgtttatccacttatctatcctccctc
cctccttcccaacctcctttgtccctccctcctgccctcctgcctcccct
ccttccctacctcccctcgttccctcgttccctcgttccctcgttcccta
attccctcccagGTGACCCAACCACCCCGCCAGGGGCCTGCATCTTCGTA
CATGCCACCTCAAATTCTGCTGCCTCCAAGAAACAAAACGCAAGGGGCAC
TGGACGAGGGGGAGGTGGGGAAGGAGGAGGAGAAGAGGGCGAGAAGGGGA
ATGGGGGGGGAGGTGGGTGATGGTGGCGATGGGGGAGGAGGGCTATTTAG
GAGTGGCTAGACGAGGAGGGAGGGAAGGAGGGAGGAAAGGAGGGAGGGAA
CAAGGTGAATGAGAAATGAAAAAGAAATGCGATGAGGGAGAAACGTGCCG
GTCGATGAAGAGGCAGGGAGGGAAGGATAGAAGGACGGAGGGAGAGAAGA
GGCAAGAATTGGGAAAAATGGTCGATTTTATACTTAATGGTAAATAAATA
GATTATTAATAAATGATAGATAAATGACAATTAGATGGCAGATAAATGAT
GATTAGATGATAGGGAATAAATAAAGACATAATCAAGAACGCCCAATGAG
AGGAAAATAAAAAAAGCAGAGAGAATCAACCAACCAATAACAGAGA
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protein sequence of NO27G00410.1

>NO27G00410.1-protein ID=NO27G00410.1-protein|Name=NO27G00410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=397bp
MSSCVKVRQGGREGGTDGGRLCLARARQILLGEGSYWAVAVSFTLLPKGL
ALEMEEEGGMEEGGEEQRGLVSVEGGREGGREDKGRDGASNAFAPEEVMS
VLEHILGKQEVEEGGRGLGREGGWLKGESPLSSSPLAFLNSNVTNAEGEG
QQKKRRGKAAAVTEEGELRTKGWNVVRTSRQGSSREAAAVGVARAAGGGG
GGGGGGGGEGGEGGEGGEGGEEEEGEGGGVIESFYPPAHAGFSRAPTYSS
SSSSSSSSSFSSSFSSSFSTSPPFQPPLPSPSLPPPSHAGPPTHRSAIAL
PSSLPPPHPTPSLPVGPPPKLATGFKIWLQQVTQPPRQGPASSYMPPQIL
LPPRNKTQGALDEGEVGKEEEKRARRGMGGEVGDGGDGGGGLFRSG*
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Synonyms
Publications