NO27G00380, NO27G00380 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO27G00380 vs. NCBI_GenBank
Match: CBJ29003.1 (thylakoid lumenal protein [Ectocarpus siliculosus]) HSP 1 Score: 122.9 bits (307), Expect = 1.400e-24 Identity = 133/170 (78.24%), Postives = 140/170 (82.35%), Query Frame = 0 Query: 75 ALADGATTRFILPPVDMKDTQRCQFKSSNMGQANAARDKLYDLRFCDMSGKDAAGFDLSGAIMAEGTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGEFDLKNLCKNPTLSGTNPKTQAPTKESAGCK 245 ALADG+TT+F LPPV + RC FKSS MGQANAARDKLYDLR CDMSGK AAGFDLSG I +E F XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMG+FD KNLCKNPTL GTNP T A T+ SAGC+ Sbjct: 29 ALADGSTTKFSLPPVG-QGKDRCLFKSSAMGQANAARDKLYDLRECDMSGKSAAGFDLSGVIASEANFSKGDFKEVVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGDFDQKNLCKNPTLKGTNPVTNADTRASAGCR 197
BLAST of NO27G00380 vs. NCBI_GenBank
Match: ABD51935.1 (chloroplast thylakoid 11 kDa protein, partial [Guillardia theta]) HSP 1 Score: 106.3 bits (264), Expect = 1.400e-19 Identity = 114/189 (60.32%), Postives = 135/189 (71.43%), Query Frame = 0 Query: 56 IASLLSSFVLPSAFMPPLPALADGATTRFILPPVDMKDTQRCQFKSSNMGQANAARDKLYDLRFCDMSGKDAAGFDLSGAIMAEGTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGEFDLKNLCKNPTLSGTNPKTQAPTKESAGCK 245 +AS ++ ++ + + PL AD ++ +F PP+D K RC F+SS +GQANAARDKLYDLR C M+GKDA GFDL+GA+M +G F XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MG+FD K +CKNPTL GTNP T T+ SA C+ Sbjct: 54 VASFVAGALILGSSVLPLDVQAD-SSLKFNFPPIDRKAKDRCTFRSSAIGQANAARDKLYDLRECPMAGKDATGFDLAGALMQKGDFSKVKFKDAVMSKVFADEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTYMGDFDNKKICKNPTLQGTNPVTGVDTRASASCR 241
BLAST of NO27G00380 vs. NCBI_GenBank
Match: XP_005820848.1 (hypothetical protein GUITHDRAFT_155908 [Guillardia theta CCMP2712] >EKX33868.1 hypothetical protein GUITHDRAFT_155908 [Guillardia theta CCMP2712]) HSP 1 Score: 106.3 bits (264), Expect = 1.400e-19 Identity = 114/189 (60.32%), Postives = 135/189 (71.43%), Query Frame = 0 Query: 56 IASLLSSFVLPSAFMPPLPALADGATTRFILPPVDMKDTQRCQFKSSNMGQANAARDKLYDLRFCDMSGKDAAGFDLSGAIMAEGTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGEFDLKNLCKNPTLSGTNPKTQAPTKESAGCK 245 +AS ++ ++ + + PL AD ++ +F PP+D K RC F+SS +GQANAARDKLYDLR C M+GKDA GFDL+GA+M +G F XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MG+FD K +CKNPTL GTNP T T+ SA C+ Sbjct: 49 VASFVAGALILGSSVLPLDVQAD-SSLKFNFPPIDRKAKDRCTFRSSAIGQANAARDKLYDLRECPMAGKDATGFDLAGALMQKGDFSKVKFKDAVMSKVFADEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTYMGDFDNKKICKNPTLQGTNPVTGVDTRASASCR 236
BLAST of NO27G00380 vs. NCBI_GenBank
Match: GAX24742.1 (hypothetical protein FisN_4Hh300 [Fistulifera solaris]) HSP 1 Score: 103.6 bits (257), Expect = 8.900e-19 Identity = 126/193 (65.28%), Postives = 143/193 (74.09%), Query Frame = 0 Query: 52 PKLAIASLLSSFVLPSAFMPPLPALADGATTRFILPPVDMKDTQRCQFKSSNMGQANAARDKLYDLRFCDMSGKDAAGFDLSGAIMAEGTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGEFDLKNLCKNPTLSGTNPKTQAPTKESAGCK 245 P + + S+FV S F ALADG T++F LPP+D D RC KSS++GQANAARDKLYDLR C++ + A G+DLSG I + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMG+FD ++LCKNPTL GTNP T T+ SAGCK Sbjct: 70 PNVFSVATASAFVAWSLFSG--AALADGQTSKFKLPPIDYSDPNRCVLKSSSIGQANAARDKLYDLRACNIPEQKAVGYDLSGVITTKTDLRKSNFQDAQFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGDFDSRSLCKNPTLQGTNPVTGVDTRASAGCK 260
BLAST of NO27G00380 vs. NCBI_GenBank
Match: OEU12361.1 (hypothetical protein FRACYDRAFT_191563 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 99.8 bits (247), Expect = 1.300e-17 Identity = 57/110 (51.82%), Postives = 68/110 (61.82%), Query Frame = 0 Query: 30 MTSSSKDDTAPFSIPASXXXFLPKLAIASLLSSFVLPSAFMPPLPALADGATTRFILPPVDMKDTQRCQFKSSNMGQANAARDKLYDLRFCDMSGKDAAGFDLSGAIMAE 140 M S D P S S LA+ASL S + + PLPA ADG T +F LPP+D+KD RC SS++GQANAARDKLYDLR C++SG A GFDLSG IM + Sbjct: 1 MNSIKNHDREP-SNDTSENNIFANLALASLFS-----LSLLSPLPAFADGQTEKFKLPPIDVKDLNRCTLASSSIGQANAARDKLYDLRQCNLSGSSAKGFDLSGVIMTK 104
BLAST of NO27G00380 vs. NCBI_GenBank
Match: XP_002185250.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43382.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 97.8 bits (242), Expect = 4.900e-17 Identity = 134/249 (53.82%), Postives = 156/249 (62.65%), Query Frame = 0 Query: 1 MRVTVLFMSLLA---SSKAFLVPT--PLRRSLTAMTSSSKDDTAPFSIPASXXXFLPKLAIASLLSSFVLPSAFMPPLPALADGATTRFILPPVDMKDTQRCQFKSSNMGQANAARDKLYDLRFCDMSGKDAAGFDLSGAIMAEGTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGEFDLKNLCKNPTLSGTNPKTQAPTKESAGCK 245 MRV ++LLA S +AF P+R SL A S S D I A + LA+++ + +F+L S+ P +LADG T F LPP+D D RC SS+MGQANAARDKL DLR C ++G A G+DLSG IM XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G+FD++ LCKNPTL G NPKT A T+ SA CK Sbjct: 1 MRVLSTVLALLAATVSVEAFAPANLKPVRPSLFAQRSDSID-----GIQA-----MKNLAVSAAV-AFILVSS---PSASLADGQTKDFKLPPIDYADKNRCVLNSSSMGQANAARDKLLDLRECKIAGAKATGYDLSGVIMTNTDASNANFAEAYFSKGYLRDSMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDFDIRLLCKNPTLKGENPKTGADTRMSANCK 235
BLAST of NO27G00380 vs. NCBI_GenBank
Match: GAX24208.1 (hypothetical protein FisN_4Lh300 [Fistulifera solaris]) HSP 1 Score: 97.8 bits (242), Expect = 4.900e-17 Identity = 137/248 (55.24%), Postives = 166/248 (66.94%), Query Frame = 0 Query: 1 MRVTVLFMSLLASSKAFLVP---TPLRRSLTAMTS-SSKDDTAPFSIPASXXXFLPKLAIASLLSSFVLPSAFMPPLPALADGATTRFILPPVDMKDTQRCQFKSSNMGQANAARDKLYDLRFCDMSGKDAAGFDLSGAIMAEGTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGEFDLKNLCKNPTLSGTNPKTQAPTKESAGCK 245 M VT+L +S S ++F P P+ ++ + + S +++ S S P + + S+F+ S F ALADG T++F LPP+D D RC KSS++GQANAARDKLYDLR C + + A G+DLSG I + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMG+FD ++LCKNPTL GTNP T T+ SAGCK Sbjct: 10 MTVTIL-LSSSHSVESFTTPLTTKPISQAKSTIVGLSVRENNGSASNNNSLQKNNPNVLSVATASAFLAWSLFSG--AALADGQTSKFKLPPIDYSDPNRCVLKSSSIGQANAARDKLYDLRACTIPQQKAVGYDLSGVITTKTDLRKSNFQDAQFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGDFDSRSLCKNPTLQGTNPVTGVDTRASAGCK 254
BLAST of NO27G00380 vs. NCBI_GenBank
Match: CEM39172.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 89.4 bits (220), Expect = 1.700e-14 Identity = 98/211 (46.45%), Postives = 121/211 (57.35%), Query Frame = 0 Query: 42 SIPASXXXFLPKLAIASLLSSFVLP-----SAFMPPLPALADG---ATTRFILPPVDMKDTQRCQFKSSNMGQANAARDKLYDLRFCDMSGKDAAGFDLSGAIMAEGTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGEFDLKNLCKNPTLSGTNPKTQAPTKESAGCK 245 S P+ LP L S+ + L SA + P P A+ A + LPP+D D RC+F+SS +GQANA RDKLYDLR C M GK+AAG+D+SG + +E F XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G+F+ ++LCKNPTL G++PKT T+ES GC+ Sbjct: 5 SSPSWLQLSLPPLLSFSVTALIALSTLHGGSASVVPQPPAAEAKAVAPGGYKLPPIDRADPNRCRFQSSAVGQANAQRDKLYDLRECKMEGKNAAGYDISGVLGSEADF----SYVNFEGAQLSKDSRFDGANFKAAVVDRVTFKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDFEQRSLCKNPTLKGSHPKTGVDTRESLGCR 211
BLAST of NO27G00380 vs. NCBI_GenBank
Match: EJK56448.1 (hypothetical protein THAOC_23663 [Thalassiosira oceanica]) HSP 1 Score: 87.0 bits (214), Expect = 8.600e-14 Identity = 127/188 (67.55%), Postives = 139/188 (73.94%), Query Frame = 0 Query: 56 IASLLSSFVLPSAFMPPLPALADGATTRFILPPVDMKDTQRCQFKSSNMGQANAARDKLYDLRFCDMSGKDAAGFDLSGAIMAEGTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGEFDLKNLCKNPTLSGTNPKTQAPTKESAGC 244 +A S + + + P+ A ADG T F LPP+D D QRC SS MGQANAARDKLYDLR C +SG + FD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +FD++NLCKNPTL G NP T A T+ SA C Sbjct: 47 LAGAASLALAAALVLSPMAAFADGQTKEFKLPPIDYSDKQRCALNSSKMGQANAARDKLYDLRECKLSGVNGQEFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFDIRNLCKNPTLKGENPLTGADTRLSANC 234
BLAST of NO27G00380 vs. NCBI_GenBank
Match: XP_005784348.1 (hypothetical protein EMIHUDRAFT_442035 [Emiliania huxleyi CCMP1516] >EOD31919.1 hypothetical protein EMIHUDRAFT_442035 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 82.8 bits (203), Expect = 1.600e-12 Identity = 119/140 (85.00%), Postives = 124/140 (88.57%), Query Frame = 0 Query: 104 MGQANAARDKLYDLRFCDMSGKDAAGFDLSGAIMAEGTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGEFDLKNLCKNPTLSGTNPKTQAPTKESAGC 244 MGQANAARD+LYDLR C MSG DA GFDLSGA+M +G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +G FD K LCKNPTL G N KT APT+ESAGC Sbjct: 1 MGQANAARDELYDLRECKMSGTDAGGFDLSGALMEKGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYIGMFDQKKLCKNPTLQGENAKTGAPTRESAGC 140 The following BLAST results are available for this feature:
BLAST of NO27G00380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 15
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO27G00380 ID=NO27G00380|Name=NO27G00380|organism=Nannochloropsis oceanica|type=gene|length=2968bpback to top protein sequence of NO27G00380.1 >NO27G00380.1-protein ID=NO27G00380.1-protein|Name=NO27G00380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=245bpback to top Synonyms
Publications
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