NO27G00230, NO27G00230 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO27G00230 vs. NCBI_GenBank
Match: CBN79451.1 (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) [Ectocarpus siliculosus]) HSP 1 Score: 96.7 bits (239), Expect = 1.700e-16 Identity = 123/326 (37.73%), Postives = 168/326 (51.53%), Query Frame = 0
Query: 63 LASFHGDAAVISKAIQETSKKLSHMARLVQRKGLFDDPAEQINQLMYSIKEDIQGLNTLVEATQRNVDDFKYRSGTQAQQLTSHSQHVVGTLRTDLADATKTFKTLLQQRSSNVKEQFDRRGQYGARTNENALVLGKPTVYRPMHM-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEYLEARAQAIEDVESHIVELGSIFNRLANMISEQRELXXXXXXXXXXXXXXXXXXXXXXXXXYSRLSNNGPLVFKSFLVLVSFIIMFVLFI 384
L FH A+ I+K+I + S+KL H+ +LVQ++GLF+DP +IN L++ IK+++Q LNT ++A+Q V+ +L + KTFK +LQQRS+N+K Q D R + + + L L P YRP+ + XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXX Q YLE+R+ A+++VE HI ELG IFN+LA M+ +QRE+ LS+N L +L+ F + F +F+
Sbjct: 51 LGEFHSAASSIAKSIHKVSQKLEHLTKLVQQRGLFNDPVAEINSLVHVIKQEMQDLNTELDASQTYVNR-XXXXXXXXXXXXXXXXXXXXXXXMELINTAKTFKNVLQQRSNNLKAQKDHREMF-VGSQSSTLALAPPPAYRPLGISPLKPSGENGNGRSSLGXXXXXXXXXXXXXXXXXXXXXGGSPLPRPGQVTSYPEAEQEASADTPXXXXXXXXXXXXXXXXXXXXASGNQGYLESRSSAVQEVEGHIAELGLIFNKLATMLQDQREMVESVHDNVEDAGESVNQGHLALLNTMRSLSSNRRLALSVSGILLLFALFFFVFL 374
BLAST of NO27G00230 vs. NCBI_GenBank
Match: CCA26417.1 (syntaxinlike protein putative [Albugo laibachii Nc14]) HSP 1 Score: 93.6 bits (231), Expect = 1.400e-15 Identity = 75/319 (23.51%), Postives = 127/319 (39.81%), Query Frame = 0
Query: 66 FHGDAAVISKAIQETSKKLSHMARLVQRKGLFDDPAEQINQLMYSIKEDIQGLNTLVEATQRNVDDFKYRSGTQAQQLTSHSQHVVGTLRTDLADATKTFKTLLQQRSSNVKEQFDRRGQYGARTNENALVLGKPTVYRPMHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEYLEARAQAIEDVESHIVELGSIFNRLANMISEQRELXXXXXXXXXXXXXXXXXXXXXXXXXYSRLSNNGPLVFKSFLVLVSFIIMFVLFIA 385
F+ A+ ISK I + S++L + +LV++ +F+DP E IN +K+DI + ++ ++ ++ + G + +HS+ +V +++DL DAT+ FK +L+ R N+K Q DRR +YG T+ + LGKP + + Q Y +R +A+ +ESHIV++ +F RL+ +ISEQ E +S LSN L FK F +L F++ F+L +A
Sbjct: 43 FNSAASGISKEICQASRRLQTLTQLVRQHSVFNDPTEAINATTMLVKKDITSITKQLD----HLQEYVHSRGDVTKSQATHSEVIVSQMKSDLMDATQGFKNILETRQQNLKLQQDRRAKYGKPTSNS---LGKPLTFEKL----------------------------------------------SSNTLPRPQGVITSDTNDEEHERKPLIAAMATQQLVSTDQNYTASRIEAVSQIESHIVDINQLFGRLSTLISEQGEQVQRVDDQVDDMVRNISAGENELLKYFSSLSNTRMLAFKIFAILFIFVVFFLLVLA 308
BLAST of NO27G00230 vs. NCBI_GenBank
Match: PIL31706.1 (hypothetical protein GSI_06409 [Ganoderma sinense ZZ0214-1]) HSP 1 Score: 93.6 bits (231), Expect = 1.400e-15 Identity = 82/314 (26.11%), Postives = 124/314 (39.49%), Query Frame = 0
Query: 70 AAVISKAIQETSKKLSHMARLVQRKGLFDDPAEQINQLMYSIKEDIQGLNTLVEATQRNVDDFKYRSGTQAQ--QLTSHSQHVVGTLRTDLADATKTFKTLLQQRSSNVKEQFDRRGQYGARTNENALVLGKPTVYRPMHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEYLEARAQAIEDVESHIVELGSIFNRLANMISEQRELXXXXXXXXXXXXXXXXXXXXXXXXXYSRLSNNGPLVFKSFLVLVSFIIMFVL 382
A+ I K I T+ KL +A+L +RK LFDD +I++L Y IK+DI +N + Q V D K + A+ QL H+ +VV L++ LAD + TFK +L+ R+ N+KE DR Q+ T +A P + Y+++R+ AIE +ES I ELG IF +LA M++EQRE Y+ +S+N L+ K F VL++F ++F+L
Sbjct: 52 ASAIGKDISSTTIKLGKLAQLAKRKTLFDDRPVEISELTYIIKQDIANINKQIAQLQAYVKDRKAQGAKSAEGKQLEEHNHNVVMLLQSKLADTSMTFKDVLEIRTQNMKESKDRTEQFMHST--SAAANQAPPSKHSSSISPTVGPARANTSTTGSLLYGNAQRHDPMGDGSGFGQSRLDTKGKGRATPQNGDILALDLHSAEEGTAAQNGDAFLQMQLVEQQDSYIQSRSTAIESIESTIAELGQIFTQLAQMVAEQRETVQRIDADTVDIATNVSGAQRELLKYYASISSNRWLMLKVFGVLIAFFLIFIL 363
BLAST of NO27G00230 vs. NCBI_GenBank
Match: ETI45103.1 (hypothetical protein F443_10234 [Phytophthora parasitica P1569]) HSP 1 Score: 93.2 bits (230), Expect = 1.900e-15 Identity = 76/321 (23.68%), Postives = 123/321 (38.32%), Query Frame = 0
Query: 64 ASFHGDAAVISKAIQETSKKLSHMARLVQRKGLFDDPAEQINQLMYSIKEDIQGLNTLVEATQRNVDDFKYRSGTQAQQLTSHSQHVVGTLRTDLADATKTFKTLLQQRSSNVKEQFDRRGQYGARTNENALVLGKPTVYRPMHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEYLEARAQAIEDVESHIVELGSIFNRLANMISEQRELXXXXXXXXXXXXXXXXXXXXXXXXXYSRLSNNGPLVFKSFLVLVSFIIMFVLFIA 385
A F+ A+ ISK + + SK+L + +LV++ +F+DP E IN+L +K+DI +N ++ Q ++ R ++Q HS +V +++DL T+ FK +L+ R N+K Q RR +YG + LGKP ++ Q Y E+RA+A+ +ESHIV++G +F RL+ +I EQ +L +S LSNN L K +L+ F F+A
Sbjct: 37 AQFNAAASDISKEVYQASKRLQQLTQLVRQNNMFNDPTEAINELAVLVKKDITDINMQLDNLQEYIN--SKRQSAPSRQAAKHSDAIVSLMKSDLMATTRGFKDILEVRQDNMKLQQSRRARYGKTASS---ALGKPLAFK----------------------------------APQPPRSNNSHTGSLQEVNLSNTLPRPGVSTGDNTEIQPLITTMTQEQIVAEQQNYTESRAEAVSQIESHIVDIGQLFGRLSTLIHEQGDLVRRIDDNVEESLVNVSSGEHELLKYFSSLSNNRMLALKISAILLVFXXXXXFFLA 318
BLAST of NO27G00230 vs. NCBI_GenBank
Match: PRW55959.1 (Qa- SYP3 Sed5p Syntaxin 5-type [Chlorella sorokiniana]) HSP 1 Score: 93.2 bits (230), Expect = 1.900e-15 Identity = 109/321 (33.96%), Postives = 148/321 (46.11%), Query Frame = 0
Query: 64 ASFHGDAAVISKAIQETSKKLSHMARLVQRKGLFDDPAEQINQLMYSIKEDIQGLNTLVEATQRNVDDFKYRSGTQAQQLTSHSQHVVGTLRTDLADATKTFKTLLQQRSSNVKEQFDRRGQYGARTNENALVLGKPTVYRPMHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEYLEARAQAIEDVESHIVELGSIFNRLANMISEQRELXXXXXXXXXXXXXXXXXXXXXXXXXYSRLSNNGPLVFKSFLVLVSFIIMFVLFIA 385
+ F AA I I TS+KL +A+L +R +FDDPAE+IN+L +K+DIQ LN + Q + G +Q HS VV LR+ L DAT+ FK +L R+ N+K +R+ + A A +P +P XXXXXXXXXXXXXXXXXXXXXXXXX +Y+ +RA+A+ VES IVELG IF +LA+M+ EQ E+ S +S+N L+ K F VL+ F+I F++F A
Sbjct: 53 SEFARRAAKIGMGIHSTSQKLQKLAQLARRTSMFDDPAEEINELSTVVKQDIQALNQAISDLQ------TFSGGGPNKQSADHSHTVVDNLRSRLKDATQEFKDVLTTRTDNLKAHQERKSMFSAAPEGGA--ARQPLFSQP------------------------------------GASFLPPNARNPLAPAVRGGLQXXXXXXXXXXXXXXXXXXXXXXXXXPAQDQYMASRAEALHQVESTIVELGGIFQQLAHMVHEQGEMATRIDENVEDTLGNVDAGQAQLLKYLSAISSNRFLIMKVFAVLLCFMIFFIMFPA 329
BLAST of NO27G00230 vs. NCBI_GenBank
Match: ETM44916.1 (hypothetical protein L914_09891 [Phytophthora parasitica] >ETO73715.1 hypothetical protein F444_10334 [Phytophthora parasitica P1976] >ETP14921.1 hypothetical protein F441_10170 [Phytophthora parasitica CJ01A1] >ETP42987.1 hypothetical protein F442_10137 [Phytophthora parasitica P10297] >KUF80776.1 Syntaxin-32 [Phytophthora nicotianae]) HSP 1 Score: 92.8 bits (229), Expect = 2.500e-15 Identity = 76/321 (23.68%), Postives = 123/321 (38.32%), Query Frame = 0
Query: 64 ASFHGDAAVISKAIQETSKKLSHMARLVQRKGLFDDPAEQINQLMYSIKEDIQGLNTLVEATQRNVDDFKYRSGTQAQQLTSHSQHVVGTLRTDLADATKTFKTLLQQRSSNVKEQFDRRGQYGARTNENALVLGKPTVYRPMHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEYLEARAQAIEDVESHIVELGSIFNRLANMISEQRELXXXXXXXXXXXXXXXXXXXXXXXXXYSRLSNNGPLVFKSFLVLVSFIIMFVLFIA 385
A F+ A+ ISK + + SK+L + +LV++ +F+DP E IN+L +K+DI +N ++ Q ++ R ++Q HS +V +++DL T+ FK +L+ R N+K Q RR +YG + LGKP ++ Q Y E+RA+A+ +ESHIV++G +F RL+ +I EQ +L +S LSNN L K +L+ F F+A
Sbjct: 37 AQFNAAASDISKEVYQASKRLQQLTQLVRQNNMFNDPTEAINELAALVKKDITDINMQLDNLQEYIN--SKRQSAPSRQAAKHSDAIVSLMKSDLMATTRGFKDILEVRQDNMKLQQSRRARYGKTASS---ALGKPLAFK----------------------------------APQPPRSNNSHTGSLQEVNLSNTLPRPGVSTGDNTEIQPLITTMTQEQIVAEQQNYTESRAEAVSQIESHIVDIGQLFGRLSTLIHEQGDLVRRIDDNVEESLVNVSSGEHELLKYFSSLSNNRMLALKISAILLVFXXXXXFFLA 318
BLAST of NO27G00230 vs. NCBI_GenBank
Match: PCH33894.1 (t-SNARE [Wolfiporia cocos MD-104 SS10]) HSP 1 Score: 92.8 bits (229), Expect = 2.500e-15 Identity = 82/328 (25.00%), Postives = 131/328 (39.94%), Query Frame = 0
Query: 64 ASFHGDAAVISKAIQETSKKLSHMARLVQRKGLFDDPAEQINQLMYSIKEDIQGLNTLVEATQRNVDDFKYRSGT---QAQQLTSHSQHVVGTLRTDLADATKTFKTLLQQRSSNVKEQFDRRGQY-------GARTNENALVLGKPTVYRPMHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEYLEARAQAIEDVESHIVELGSIFNRLANMISEQRELXXXXXXXXXXXXXXXXXXXXXXXXXYSRLSNNGPLVFKSFLVLVSFIIMFVL 382
+ F A+ I+K I T+ KL +A+L +RK LFDD +I++L Y IK+DI +N + + Q +V + + + +QL H+ +VV L++ LAD + TFK +L+ R+ N+KE DR Q+ ++ N+L+ G PM Y+++R+ AIE +ES I ELG IF +LA M++EQRE Y+ +S+N L+ K F VL+ F ++F+L
Sbjct: 46 SEFSKMASAIAKDISSTTIKLGKLAQLAKRKTLFDDRPVEISELTYIIKQDIANINKQIASLQSSVKQRNAQGASKTPEGKQLEEHNHNVVMLLQSKLADTSMTFKDVLEIRTQNMKESKDRTEQFMHSTSAAASQAPSNSLLFGNTQRQDPM-------------------------------GDGTLVSSRYDAKGKGRATPQPNGDILALDLGAAEEGSGQNGDAFMQMQLVEQQDNYIQSRSTAIESIESTIAELGQIFTQLAQMVAEQRETVQRIDADTVDIASNVSGAQRELLKYYASISSNRWLMLKVFGVLIVFFLVFIL 342
BLAST of NO27G00230 vs. NCBI_GenBank
Match: OBZ79502.1 (Integral membrane protein sed5 [Grifola frondosa]) HSP 1 Score: 92.4 bits (228), Expect = 3.200e-15 Identity = 82/328 (25.00%), Postives = 131/328 (39.94%), Query Frame = 0
Query: 64 ASFHGDAAVISKAIQETSKKLSHMARLVQRKGLFDDPAEQINQLMYSIKEDIQGLNTLVEATQRNVDDFKYRSGT---QAQQLTSHSQHVVGTLRTDLADATKTFKTLLQQRSSNVKEQFDRRGQY-------GARTNENALVLGKPTVYRPMHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEYLEARAQAIEDVESHIVELGSIFNRLANMISEQRELXXXXXXXXXXXXXXXXXXXXXXXXXYSRLSNNGPLVFKSFLVLVSFIIMFVL 382
+ F A+ I K I T+ KL +A+L +RK LFDD +I++L Y IK+DI +N + + Q V + K + + + +QL H+ +VV L++ LAD + TFK +L+ R+ N+KE DR Q+ ++ ++L+ G PM Y+++R+ AIE +ES I ELG IF +LA M++EQRE Y+ +S+N L+ K F VL+ F ++F+L
Sbjct: 49 SEFTRKASAIGKDISSTAIKLGKLAQLAKRKTLFDDRPVEISELTYIIKQDIANINRQIASLQSYVKERKSQGASKSPEGKQLEEHNHNVVMLLQSKLADTSMTFKDVLEVRTQNMKESKDRTEQFMHSTSAAASQAPASSLLFGNTQRQDPM------------------------------GDGSLSSSRYDAKGKGRATPQNNGDILALDLGSAEEGTASHNGDAFMQMQLVEQQDNYIQSRSTAIESIESTIAELGQIFTQLAQMVAEQRETVQRIDADTVDIASNVSGAQRELLKYYASISSNRWLMLKIFGVLIVFFLVFIL 346
BLAST of NO27G00230 vs. NCBI_GenBank
Match: XP_014528736.1 (syntaxin-like protein [Blastocystis sp. subtype 4] >KNB45293.1 syntaxin-like protein [Blastocystis sp. subtype 4]) HSP 1 Score: 92.0 bits (227), Expect = 4.200e-15 Identity = 83/322 (25.78%), Postives = 125/322 (38.82%), Query Frame = 0
Query: 63 LASFHGDAAVISKAIQETSKKLSHMARLVQRKGLFDDPAEQINQLMYSIKEDIQGLNTLVEATQRNVDDFKYRSGTQAQQLTSHSQHVVGTLRTDLADATKTFKTLLQQRSSNVKEQFDRRGQYGARTNENALVLGKPTVYRPMHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEYLEARAQAIEDVESHIVELGSIFNRLANMISEQRELXXXXXXXXXXXXXXXXXXXXXXXXXYSRLSNNGPLVFKSFLVLVSFIIMFVLFIA 385
++ F A +S + +T+ KL + LV+RK LFDD + +INQL SIK+DI +N +E ++ V KY S Q + Q VV L+ +L TK F+ +L+ R N++E RR ++G +LGKP VY+ +YL RAQA++D+E+H+ ELGSIF RL+ MI+EQ E+ + +N L+ K F VL+ FI +F+A
Sbjct: 35 VSKFSRVTASLSNRVSKTTLKLQRLTDLVRRKSLFDDKSAEINQLTGSIKQDITSINAELEELEQFVRMQKYASA----QSREYDQGVVEVLKEELMGTTKDFRKVLETRHENLQETDKRRQKFGPSA---PALLGKPIVYQ---------------------------------------------SSTSPLMGSDKDTSDERTKLLPRPNNVTPSNNFAIQTSDVIANDYLHERAQAVQDIEAHMTELGSIFERLSTMITEQGEMIDRLDDNLDAAEVNVNMGYQEIVKYGQNVFSNRSLIMKLFGVLIFFIXXXXIFLA 304
BLAST of NO27G00230 vs. NCBI_GenBank
Match: KNE90884.1 (hypothetical protein PSTG_15675 [Puccinia striiformis f. sp. tritici PST-78]) HSP 1 Score: 92.0 bits (227), Expect = 4.200e-15 Identity = 83/317 (26.18%), Postives = 126/317 (39.75%), Query Frame = 0
Query: 70 AAVISKAIQETSKKLSHMARLVQRKGLFDDPAEQINQLMYSIKEDIQGLNTLVEATQRNVDDFKYRSGTQAQQLTSHSQHVVGTLRTDLADATKTFKTLLQQRSSNVKEQFDRRGQY-----GARTNENALVLGKPTVYRPMHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEYLEARAQAIEDVESHIVELGSIFNRLANMISEQRELXXXXXXXXXXXXXXXXXXXXXXXXXYSRLSNNGPLVFKSFLVLVSFIIMFVL 382
A +I K IQ+T+ KLS +A+L +RK LFDD +I++L Y IK+DI LN + Q V + Q Q + H+ +VV L++ LAD + FK +L+ R+ N+K DR Q+ G T +++ +PT P + YL+ R+ AIE +ES I ELGSIF++LA M+++Q E YS +S N L+FK F +++ F ++FVL
Sbjct: 133 AGMIGKDIQQTTLKLSQLAQLAKRKTLFDDRPVEISELTYIIKQDIAQLNQQIAQLQTFVKQNLSTNRGQKQPVDEHNNNVVMMLQSKLADTSLGFKDVLEIRTQNMKATRDRSEQFHFNTPGVTTTTQSVLRSRPTSSSPFN-------NSHQSTDSPLYATQQAGVASAVNRSLYDSKGKGKSTTQDSGYQQNEYLALDMGKNSNQVESGGPQGYMQMQLTQDNSDAYLQQRSTAIESIESTITELGSIFSQLATMVAQQGEQVQRIDQDTMDIESNIQSAQSELLKFYSSISGNRMLMFKIFGMIMVFFLLFVL 442 The following BLAST results are available for this feature:
BLAST of NO27G00230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO27G00230 ID=NO27G00230|Name=NO27G00230|organism=Nannochloropsis oceanica|type=gene|length=3074bpback to top protein sequence of NO27G00230.1 >NO27G00230.1-protein ID=NO27G00230.1-protein|Name=NO27G00230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=385bpback to top Synonyms
Publications
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