NO27G00110, NO27G00110 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO27G00110 vs. NCBI_GenBank
Match: EWM20416.1 (hypothetical protein Naga_101490g1 [Nannochloropsis gaditana]) HSP 1 Score: 141.7 bits (356), Expect = 4.500e-30 Identity = 60/71 (84.51%), Postives = 67/71 (94.37%), Query Frame = 0
Query: 304 MPVADASSTFFTPAKLDHQAYSKPRCDAAAPNVQLVLTGMKRKIDHYHYSVDCPTCTLPGPEGEEKANKRI 375
MPVA A TFFTPAKLDHQAYSKPRCD AAPNVQL+LTG+KR++DHYHYSVDCPTC+LPGPEGEEKAN+R+
Sbjct: 1 MPVALAEQTFFTPAKLDHQAYSKPRCDGAAPNVQLILTGLKRRVDHYHYSVDCPTCSLPGPEGEEKANRRL 71
BLAST of NO27G00110 vs. NCBI_GenBank
Match: WP_043443379.1 (peptide-methionine (S)-S-oxide reductase MsrA [Streptomyces nodosus] >AJE42230.1 peptide methionine sulfoxide reductase [Streptomyces nodosus]) HSP 1 Score: 85.1 bits (209), Expect = 5.000e-13 Identity = 65/197 (32.99%), Postives = 83/197 (42.13%), Query Frame = 0
Query: 195 PVGAEKAFFALGCYWGAEATF-RCTRGVVGTRVGFMGGKQPAPFYENT----KDHLEAIEVTYTGGDETYERLLKVCGRTFDFV-------DVGPRYQRKIWPASSGQSGLA-----------TKRGQTWSSMPVADASSTFFTPAKLDHQAYSKPRCDAAAPNVQLVLTGMKRKID---HYHYSVDCPTCTLPGPE 366
P G E A F +GC+WGAE TF R GV T VG+ GG P YE H EA+ V Y +YERLLKV + + DVG +Y+ ++ S Q+ A T G + V A F PA+ HQ Y DA PN L G ++ ++ CPT P PE
Sbjct: 42 PEGLEIADFGMGCFWGAERTFWRLPEGVWTTLVGYQGGHTENPTYEEVCSGLTGHTEAVRVVYDPRKISYERLLKVFWESHNPTQGFRQGNDVGTQYRSAVYTHSPAQAAAAEASREAYQKVLTASGHGRITTEVLPAEGRTFYPAEAYHQQYLS---DAKNPNGYCGLGGTGVELTAPFETNWGASCPTGIAPAPE 235
BLAST of NO27G00110 vs. NCBI_GenBank
Match: ACY99929.1 (peptide methionine sulfoxide reductase [Thermomonospora curvata DSM 43183]) HSP 1 Score: 84.3 bits (207), Expect = 8.500e-13 Identity = 65/190 (34.21%), Postives = 80/190 (42.11%), Query Frame = 0
Query: 195 PVGAEKAFFALGCYWGAEATFRCTRGVVGTRVGFMGGKQPAPFYENT----KDHLEAIEVTYTGGDETYERLLKVCGRTFDFV-------DVGPRYQRKIWPASSGQSGLA-----------TKRGQTWSSMPVADASSTFFTPAKLDHQAYSKPRCDAAAPNVQLVLTGMKRKIDHYHYSVDCPTCTLP 363
P G+E A FALGC+WGAE TF GV+ T VG+ GG P P YE H EA+ V Y TYERLL+V + D D+G +Y+ I+ S Q A T G + +A A +F A+ HQ Y DA PN L G V CP P
Sbjct: 45 PEGSEIADFALGCFWGAERTFWQVPGVITTAVGYQGGYTPNPTYEEVCSGLTGHAEAVRVVYDPAKVTYERLLRVFWESHDPTQGMRQGNDIGTQYRSAIYTHSEAQRKAAEASREAYQKALTAAGHGTITTEIAPAGPFYF--AEPYHQQYLS---DAKNPNGYCGLGGT---------GVSCPVGIAP 220
BLAST of NO27G00110 vs. NCBI_GenBank
Match: WP_041442658.1 (peptide-methionine (S)-S-oxide reductase MsrA [Thermomonospora curvata] >PKK12259.1 peptide-methionine (S)-S-oxide reductase MsrA [Thermomonospora sp. CIF 1]) HSP 1 Score: 84.3 bits (207), Expect = 8.500e-13 Identity = 65/190 (34.21%), Postives = 80/190 (42.11%), Query Frame = 0
Query: 195 PVGAEKAFFALGCYWGAEATFRCTRGVVGTRVGFMGGKQPAPFYENT----KDHLEAIEVTYTGGDETYERLLKVCGRTFDFV-------DVGPRYQRKIWPASSGQSGLA-----------TKRGQTWSSMPVADASSTFFTPAKLDHQAYSKPRCDAAAPNVQLVLTGMKRKIDHYHYSVDCPTCTLP 363
P G+E A FALGC+WGAE TF GV+ T VG+ GG P P YE H EA+ V Y TYERLL+V + D D+G +Y+ I+ S Q A T G + +A A +F A+ HQ Y DA PN L G V CP P
Sbjct: 33 PEGSEIADFALGCFWGAERTFWQVPGVITTAVGYQGGYTPNPTYEEVCSGLTGHAEAVRVVYDPAKVTYERLLRVFWESHDPTQGMRQGNDIGTQYRSAIYTHSEAQRKAAEASREAYQKALTAAGHGTITTEIAPAGPFYF--AEPYHQQYLS---DAKNPNGYCGLGGT---------GVSCPVGIAP 208
BLAST of NO27G00110 vs. NCBI_GenBank
Match: WP_058193752.1 (MULTISPECIES: peptide-methionine (S)-S-oxide reductase [Proteobacteria] >KSG86461.1 peptide-methionine (S)-S-oxide reductase [Pseudomonas aeruginosa] >PIC02432.1 peptide-methionine (S)-S-oxide reductase [Caulobacter sp. FWC26]) HSP 1 Score: 83.6 bits (205), Expect = 1.500e-12 Identity = 49/140 (35.00%), Postives = 70/140 (50.00%), Query Frame = 0
Query: 199 EKAFFALGCYWGAEATFRCTRGVVGTRVGFMGGKQPAPFYENTKDHLEAIEVTYTGGDETYERLLKVCGRTFDFV-------DVGPRYQRKIWPASSGQSGLATK------RGQTWSSMPVADAS-STFFTPAKLDHQAY 325
E+A A GC+WG E FR RGVVGTRVG++GG+ P P Y H EA+E+T+ +Y ++L+ + D DVGP Y+ I+ S Q +A K W V++ + F A+ +HQ Y
Sbjct: 4 ERAILAGGCFWGLEDLFRRARGVVGTRVGYIGGEMPDPTYARHHGHAEAVEITFDPAVTSYRKILEYFFQIHDPTTYEQQGSDVGPSYRSAIFYTSQAQMDVALKTIAEIEASGRWPGPVVSEINPEEPFWEAEAEHQLY 143
BLAST of NO27G00110 vs. NCBI_GenBank
Match: OCL36639.1 (peptide-methionine (S)-S-oxide reductase [Tessaracoccus lapidicaptus] >AQX17145.1 peptide-methionine (S)-S-oxide reductase [Tessaracoccus sp. T2.5-30]) HSP 1 Score: 83.2 bits (204), Expect = 1.900e-12 Identity = 53/150 (35.33%), Postives = 73/150 (48.67%), Query Frame = 0
Query: 195 PVGAEKAFFALGCYWGAEATFRCTRGVVGTRVGFMGGKQPAPFYENT----KDHLEAIEVTYTGGDETYERLLKVCGRTFDFV-------DVGPRYQRKIWPASSGQSGLATK-RGQTWSSMPVADAS--STFFTP------AKLDHQAY 325
P GAE A+FALGCYWG E F T GVV T GFMGG P P Y T H E ++V + +YE LL++ D D+G +Y+ ++P Q A + RG+ ++ A +T TP A+++HQ Y
Sbjct: 38 PPGAEVAYFALGCYWGVERLFWETDGVVNTAAGFMGGFTPNPTYRETCTGRTGHTETVQVVFDPQRVSYEELLRLFWENHDPTQLNRQGNDIGTQYRSAVFPVDEEQRAAAERTRGEFQENLSAAGYGEITTEITPGQTFYFAEVEHQQY 187
BLAST of NO27G00110 vs. NCBI_GenBank
Match: WP_078920413.1 (MULTISPECIES: peptide-methionine (S)-S-oxide reductase MsrA [Tessaracoccus]) HSP 1 Score: 83.2 bits (204), Expect = 1.900e-12 Identity = 53/150 (35.33%), Postives = 73/150 (48.67%), Query Frame = 0
Query: 195 PVGAEKAFFALGCYWGAEATFRCTRGVVGTRVGFMGGKQPAPFYENT----KDHLEAIEVTYTGGDETYERLLKVCGRTFDFV-------DVGPRYQRKIWPASSGQSGLATK-RGQTWSSMPVADAS--STFFTP------AKLDHQAY 325
P GAE A+FALGCYWG E F T GVV T GFMGG P P Y T H E ++V + +YE LL++ D D+G +Y+ ++P Q A + RG+ ++ A +T TP A+++HQ Y
Sbjct: 33 PPGAEVAYFALGCYWGVERLFWETDGVVNTAAGFMGGFTPNPTYRETCTGRTGHTETVQVVFDPQRVSYEELLRLFWENHDPTQLNRQGNDIGTQYRSAVFPVDEEQRAAAERTRGEFQENLSAAGYGEITTEITPGQTFYFAEVEHQQY 182
BLAST of NO27G00110 vs. NCBI_GenBank
Match: WP_003954888.1 (peptide-methionine (S)-S-oxide reductase MsrA [Streptomyces clavuligerus] >EDY49399.1 peptide methionine sulfoxide reductase [Streptomyces clavuligerus ATCC 27064] >ANW18451.1 peptide-methionine (S)-S-oxide reductase [Streptomyces clavuligerus]) HSP 1 Score: 82.8 bits (203), Expect = 2.500e-12 Identity = 61/197 (30.96%), Postives = 80/197 (40.61%), Query Frame = 0
Query: 195 PVGAEKAFFALGCYWGAEATFRCTRGVVGTRVGFMGGKQPAPFYENT----KDHLEAIEVTYTGGDETYERLLKVCGRTFDFV-------DVGPRYQRKIWPASSGQSGLATKRGQTWSSMPVADASSTF-----------FTPAKLDHQAYSKPRCDAAAPNVQLVLTGMKRKIDHYHYSVDCPTCTLPGPEGEEK 370
P G E A F LGC+WGAE F GV T VG+ GG P P Y+ T H E + V Y + +YERLLKV + D DVG +Y+ ++ S Q+ A + + + A ST F PA+ HQ Y P + G V CP P P+ E+K
Sbjct: 42 PEGLETADFGLGCFWGAERKFWQLPGVWTTLVGYQGGCTPHPTYDETCSGLTGHTEVVRVVYDPAEISYERLLKVFWESHDPTQGFRQGNDVGTQYRSAVYTHSPEQTATAKASREAYQKVLTASGHSTITTEILPADGLPFYPAEAYHQQYLDKN-----PAGYCGIGGT---------GVSCPIGVAPAPDPEQK 224
BLAST of NO27G00110 vs. NCBI_GenBank
Match: EFG08920.1 (Peptide methionine sulfoxide reductase [Streptomyces clavuligerus ATCC 27064]) HSP 1 Score: 82.8 bits (203), Expect = 2.500e-12 Identity = 61/197 (30.96%), Postives = 80/197 (40.61%), Query Frame = 0
Query: 195 PVGAEKAFFALGCYWGAEATFRCTRGVVGTRVGFMGGKQPAPFYENT----KDHLEAIEVTYTGGDETYERLLKVCGRTFDFV-------DVGPRYQRKIWPASSGQSGLATKRGQTWSSMPVADASSTF-----------FTPAKLDHQAYSKPRCDAAAPNVQLVLTGMKRKIDHYHYSVDCPTCTLPGPEGEEK 370
P G E A F LGC+WGAE F GV T VG+ GG P P Y+ T H E + V Y + +YERLLKV + D DVG +Y+ ++ S Q+ A + + + A ST F PA+ HQ Y P + G V CP P P+ E+K
Sbjct: 68 PEGLETADFGLGCFWGAERKFWQLPGVWTTLVGYQGGCTPHPTYDETCSGLTGHTEVVRVVYDPAEISYERLLKVFWESHDPTQGFRQGNDVGTQYRSAVYTHSPEQTATAKASREAYQKVLTASGHSTITTEILPADGLPFYPAEAYHQQYLDKN-----PAGYCGIGGT---------GVSCPIGVAPAPDPEQK 250
BLAST of NO27G00110 vs. NCBI_GenBank
Match: OGP18018.1 (peptide-methionine (S)-S-oxide reductase [Deltaproteobacteria bacterium GWA2_55_82] >OGQ62047.1 peptide-methionine (S)-S-oxide reductase [Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_55_12] >OIJ74096.1 peptide-methionine (S)-S-oxide reductase [Deltaproteobacteria bacterium GWC2_55_46]) HSP 1 Score: 82.4 bits (202), Expect = 3.200e-12 Identity = 54/154 (35.06%), Postives = 75/154 (48.70%), Query Frame = 0
Query: 193 INPVGAEKAFFALGCYWGAEATFRCTRGVVGTRVGFMGGKQPAPFYE----NTKDHLEAIEVTYTGGDETYERLLKVCGRTFDFV-------DVGPRYQRKIWPASSGQSGLA------TKRGQTWSSMPVAD-ASSTFFTPAKLDHQAYSKPR 329
+N EKA FA GC+WG E TFR +GV+ TRVG+ GG P YE + H EA+EVT+ G +Y L + D D+G +Y+ I+ S+ Q LA ++ +S V + A + F PA+ HQ Y K R
Sbjct: 1 MNEKKTEKAVFAAGCFWGVEETFRNVKGVISTRVGYTGGSTEDPSYEEVCTESTGHAEAVEVTFDPGTVSYGEFLNIFWDIHDPTTLDRQGPDIGSQYRSAIFYMSTEQERLAMGSKERLEQSGIYSGPIVTEIAPAGVFYPAEEYHQKYLKKR 154 The following BLAST results are available for this feature:
BLAST of NO27G00110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO27G00110 ID=NO27G00110|Name=NO27G00110|organism=Nannochloropsis oceanica|type=gene|length=2499bpback to top protein sequence of NO27G00110.1 >NO27G00110.1-protein ID=NO27G00110.1-protein|Name=NO27G00110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=375bpback to top Synonyms
Publications
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