NO26G01820, NO26G01820 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G01820 vs. NCBI_GenBank
Match: PNR47945.1 (hypothetical protein PHYPA_012418 [Physcomitrella patens]) HSP 1 Score: 84.0 bits (206), Expect = 9.100e-13 Identity = 54/153 (35.29%), Postives = 80/153 (52.29%), Query Frame = 0 Query: 141 QSSTAYSGGRLEFKIKSA-SVMPGIITAVYFASGNGRTGDSSLGNQDEIDLEFKGNEPTRVQTNVFMNG-QENLQMIDLGYDSSSDEHLYAVEWDNNAVRFKVDGREARSV--------PLTRPLQHMQLHMSVWTTT----GGWPGLIQWGG 280 +S +Y G+ +IK A G++T+ Y +SG G QDEID EF G+ VQTN ++NG +N Q ++L YD SS H YA+ +D + +++ VD + R+V L P + M L+ SVW + GGW G +W G Sbjct: 416 RSLNSYPSGKFSSRIKCAEGDTSGLLTSFYVSSGEGTI------TQDEIDFEFLGDNKRIVQTNFYVNGTSDNEQWVELDYDCSSGFHTYAIHYDQHQIKWFVDSKLVRTVVKEDQLRERLPYPTKRMFLYSSVWNASFVNDGGWTG--KWHG 560
BLAST of NO26G01820 vs. NCBI_GenBank
Match: XP_024384207.1 (uncharacterized protein LOC112286506 [Physcomitrella patens] >XP_024384209.1 uncharacterized protein LOC112286506 [Physcomitrella patens]) HSP 1 Score: 84.0 bits (206), Expect = 9.100e-13 Identity = 54/153 (35.29%), Postives = 80/153 (52.29%), Query Frame = 0 Query: 141 QSSTAYSGGRLEFKIKSA-SVMPGIITAVYFASGNGRTGDSSLGNQDEIDLEFKGNEPTRVQTNVFMNG-QENLQMIDLGYDSSSDEHLYAVEWDNNAVRFKVDGREARSV--------PLTRPLQHMQLHMSVWTTT----GGWPGLIQWGG 280 +S +Y G+ +IK A G++T+ Y +SG G QDEID EF G+ VQTN ++NG +N Q ++L YD SS H YA+ +D + +++ VD + R+V L P + M L+ SVW + GGW G +W G Sbjct: 456 RSLNSYPSGKFSSRIKCAEGDTSGLLTSFYVSSGEGTI------TQDEIDFEFLGDNKRIVQTNFYVNGTSDNEQWVELDYDCSSGFHTYAIHYDQHQIKWFVDSKLVRTVVKEDQLRERLPYPTKRMFLYSSVWNASFVNDGGWTG--KWHG 600
BLAST of NO26G01820 vs. NCBI_GenBank
Match: WP_063563719.1 (MULTISPECIES: beta-glucanase [Paenibacillus] >SDK47454.1 Glycosyl hydrolases family 16 [Paenibacillus sp. OK060] >SLJ88549.1 Glycosyl hydrolases family 16 [Paenibacillus sp. RU5A] >SOC62985.1 Glycosyl hydrolases family 16 [Paenibacillus sp. RU26A] >SOC68514.1 Glycosyl hydrolases family 16 [Paenibacillus sp. RU5M]) HSP 1 Score: 83.6 bits (205), Expect = 1.200e-12 Identity = 62/198 (31.31%), Postives = 106/198 (53.54%), Query Frame = 0 Query: 97 TQDKWEKRDFWSVFYSNGDRNEIRDIGNNRMSITIAP----WKEAVSAQSST--AYSGGRLEFKIKSASVMPGIITAVYFASGNGRTGDSSLGNQDEIDLEFKGNEPTRVQTNVFMNG-QENLQMIDLGYDSSSDEHLYAVEWDNNAVRFKVDGREARSVPLTR---PLQHMQLHMSVWTTTGG---WPGLIQWGGYP 282 T D W + V + ++ + I R+ T P K SA+ ST Y GR+E ++K+AS + G++T+++ SG G TG S+ DEID+E G + T+++TN F NG ++ +I+LG+D+S D H YA EW +++++ VDG+ + +R P + +++W+ +G W G + G P Sbjct: 51 TSDGWANGPDFGVGWKAVNQEFVNGIMALRLDNTGCPASCSGKNYASAEYSTHVKYGYGRVEARLKAASGV-GLVTSLFTYSGQG-TGTSN----DEIDIEILGKDTTKMETNYFTNGVGQHSTIINLGFDASLDFHNYAFEWSPSSIKWYVDGKLVHTETGSRGTLPTSPGYIMVNLWSGSGPAEIWTGKFNYPGMP 242
BLAST of NO26G01820 vs. NCBI_GenBank
Match: WP_064637706.1 (beta-glucanase [Paenibacillus sp. AD87] >OAX48368.1 Beta-glucanase [Paenibacillus sp. AD87]) HSP 1 Score: 83.2 bits (204), Expect = 1.500e-12 Identity = 62/198 (31.31%), Postives = 106/198 (53.54%), Query Frame = 0 Query: 97 TQDKWEKRDFWSVFYSNGDRNEIRDIGNNRMSITIAP----WKEAVSAQSST--AYSGGRLEFKIKSASVMPGIITAVYFASGNGRTGDSSLGNQDEIDLEFKGNEPTRVQTNVFMNG-QENLQMIDLGYDSSSDEHLYAVEWDNNAVRFKVDGREARSVPLTR---PLQHMQLHMSVWTTTGG---WPGLIQWGGYP 282 T D W + V + ++ + I R+ T P K SA+ ST Y GR+E ++K+AS + G++T+++ SG G TG S+ DEID+E G + T+++TN F NG ++ +I+LG+D+S D H YA EW +++++ VDG+ + +R P + +++W+ +G W G + G P Sbjct: 51 TSDGWANGPDFGVGWKAVNQEFVNGIMALRLDNTGCPASCSGKNYASAEYSTHVKYGYGRVEARLKAASGV-GLVTSLFTYSGQG-TGTSN----DEIDIEILGKDTTKMETNYFTNGVGQHSTIINLGFDASLDFHNYAFEWSPSSIKWYVDGKLVHTENGSRGTLPTSPGYIMVNLWSGSGPAEIWTGKFNYPGMP 242
BLAST of NO26G01820 vs. NCBI_GenBank
Match: WP_072733091.1 (beta-glucanase [Paenibacillus sp. ov031] >SHN60279.1 Glycosyl hydrolases family 16 [Paenibacillus sp. ov031]) HSP 1 Score: 83.2 bits (204), Expect = 1.500e-12 Identity = 61/198 (30.81%), Postives = 106/198 (53.54%), Query Frame = 0 Query: 97 TQDKWEKRDFWSVFYSNGDRNEIRDIGNNRMSITIAP----WKEAVSAQSST--AYSGGRLEFKIKSASVMPGIITAVYFASGNGRTGDSSLGNQDEIDLEFKGNEPTRVQTNVFMNG-QENLQMIDLGYDSSSDEHLYAVEWDNNAVRFKVDGREARSVPLTR---PLQHMQLHMSVWTTTGG---WPGLIQWGGYP 282 T D W + V + ++ + I R+ T P K SA+ ST Y GR+E ++K+AS + G++T+++ SG G TG S+ DEID+E G + T+++TN F NG ++ +I+LG+D+S D H YA EW +++++ +DG+ + +R P + +++W+ +G W G + G P Sbjct: 51 TSDGWANGPDFGVGWKAVNQEFVNGIMALRLDNTGCPASCSGKNYASAEYSTHVKYGYGRVEARLKAASGV-GLVTSLFTYSGQG-TGTSN----DEIDIEILGKDTTKMETNYFTNGVGQHSTIINLGFDASLDFHNYAFEWSPSSIKWYIDGKLVHTETGSRGTLPTSPGYIMVNLWSGSGPAEIWTGKFNYPGMP 242
BLAST of NO26G01820 vs. NCBI_GenBank
Match: ORY31696.1 (concanavalin A-like lectin/glucanase [Neocallimastix californiae]) HSP 1 Score: 83.2 bits (204), Expect = 1.500e-12 Identity = 53/165 (32.12%), Postives = 81/165 (49.09%), Query Frame = 0 Query: 141 QSSTAYSGGRLEFKIKSASVMPGIITAVYFASGNGRTGDSSLGNQDEIDLEFKGNEPTRVQTNVFMNGQENLQMI-DLGYDSSSDEHLYAVEWDNNAVRFKVDGREARSVPLTRPLQHMQLHMSVWTTTG--GWPGLIQWGGYPNWGSRGNQPVETILEIIKYPD 303 +++ Y G+ E + K + G++ A+YFAS T D++ G+QDE D E G+ R+QTN+F++G + I + D S D HLY EW +NA+ KVD R+ P Q ++ W G GW G W QP + I++ +K D Sbjct: 186 RTNVRYKSGKFEVRAK-MPIASGLVPAIYFAS----TPDNTNGDQDEFDFELIGS--NRMQTNLFIHGNGGREQIWNPPTDLSKDFHLYTFEWSSNAIVLKVDNEVIRTFNNPMPDQPSYFILTNWMCIGCDGWTGPADW---------SKQPYDFIVDYVKISD 334
BLAST of NO26G01820 vs. NCBI_GenBank
Match: WP_090806741.1 (beta-glucanase [Paenibacillus sp. 276b] >SEA67055.1 Glycosyl hydrolases family 16 [Paenibacillus sp. 276b]) HSP 1 Score: 82.0 bits (201), Expect = 3.400e-12 Identity = 54/156 (34.62%), Postives = 92/156 (58.97%), Query Frame = 0 Query: 135 KEAVSAQSST--AYSGGRLEFKIKSASVMPGIITAVYFASGNGRTGDSSLGNQDEIDLEFKGNEPTRVQTNVFMNG-QENLQMIDLGYDSSSDEHLYAVEWDNNAVRFKVDGREARSVPLTR---PLQHMQLHMSVWTTTGG---WPGLIQWGGYP 282 K SA+ ST Y GR+E ++K+AS + G++T+++ SG G TG S+ DEID+E G + T+++TN F NG ++ +I+LG+D+S D H YA EW +++++ VDG+ + +R P + +++W+ +G W G + G P Sbjct: 93 KNYASAEYSTHVKYGYGRVEARLKAASGV-GLVTSLFTYSGQG-TGTSN----DEIDIEILGKDTTKMETNYFTNGVGQHSTIINLGFDASLDFHNYAFEWSPSSIKWYVDGKLVHTENGSRGTLPTSPGYIMVNLWSGSGPAEIWTGKFNYPGMP 242
BLAST of NO26G01820 vs. NCBI_GenBank
Match: WP_059047190.1 (beta-glucanase [Paenibacillus rubinfantis]) HSP 1 Score: 81.6 bits (200), Expect = 4.500e-12 Identity = 50/162 (30.86%), Postives = 87/162 (53.70%), Query Frame = 0 Query: 146 YSGGRLEFKIKSASVMPGIITAVYFASGNGRTGDSSLGNQDEIDLEFKGNEPTRVQTNVFMNGQ-ENLQMIDLGYDSSSDEHLYAVEWDNNAVRFKVDGREARSVPLTRPLQHMQLHMSVWTTTGGWPGLIQWGGYPNWGSRGNQPVETILEIIK---YPDQ 304 Y G+ E ++K+A GI+++ + TG S DEID+EF G +PT +Q N + +G+ + ++IDLGYD+S + H YA EW +A+ + +DG+ + P+ ++ M++W T G+ +W G + G P+ E +K YP++ Sbjct: 95 YHYGKYEVRMKAAK-NTGIVSSFFI-----YTGPSFGTPWDEIDIEFLGKDPTMIQLNYYTDGKGGHEKLIDLGYDASQEFHNYAFEWKKDAIHWYIDGKLVHTATDNLPVTPAKIMMNLWNGT----GVDEWLGPYD----GTSPITAEYEWVKFTPYPEE 242
BLAST of NO26G01820 vs. NCBI_GenBank
Match: OKP97649.1 (beta-glucanase [Paenibacillus sp. P46E]) HSP 1 Score: 81.3 bits (199), Expect = 5.900e-12 Identity = 59/197 (29.95%), Postives = 98/197 (49.75%), Query Frame = 0 Query: 86 DATVAVEAMSA-TQDKWEKRDFWSVFYSNGD-------RNEIRDIGNNRMSITIAPWK----EAVSAQSSTAYSGGRLEFKIKSASVMPGIITAVYFASGNGRTGDSSLGNQDEIDLEFKGNEPTRVQTNVFMNG-QENLQMIDLGYDSSSDEHLYAVEWDNNAVRFKVDGREARSVPLTRPLQHMQLHMSVWTTTG 270 +A V + SA + W K D YSNGD + I+ G+ M+++I + +S YS GR E ++K A+ PG++++ + TG S DEID+EF G ++Q N F +G ++ Q+IDLG+D+S + H Y +W N++ + +DGR + P ++ M++W TG Sbjct: 18 EAGVVKDNFSAFNTELWNKTD----GYSNGDMFNCTWREDNIKFAGDGLMTLSITSPSSGEFDGAEYRSLDKYSYGRYEIQMKPAA-NPGVVSSFF-----TYTGPSEGEPWDEIDIEFLGKNTQQMQLNYFTDGVGKHEQVIDLGFDASQEFHWYGFDWKKNSITWYIDGRPVHTATENIPSTPGRIMMNLWNGTG 204
BLAST of NO26G01820 vs. NCBI_GenBank
Match: WP_076291344.1 (beta-glucanase [Paenibacillus pabuli] >OME78099.1 beta-glucanase [Paenibacillus pabuli]) HSP 1 Score: 80.9 bits (198), Expect = 7.700e-12 Identity = 54/156 (34.62%), Postives = 91/156 (58.33%), Query Frame = 0 Query: 135 KEAVSAQSST--AYSGGRLEFKIKSASVMPGIITAVYFASGNGRTGDSSLGNQDEIDLEFKGNEPTRVQTNVFMNG-QENLQMIDLGYDSSSDEHLYAVEWDNNAVRFKVDGREARSVPLTR---PLQHMQLHMSVWTTTGG---WPGLIQWGGYP 282 K SA+ ST Y GR+E ++K+AS + G++T+++ SG G TG S+ DEID+E G + T+++TN F NG ++ +I+LG+D+S D H YA EW + +++ VDG+ + +R P + +++W+ +G W G + G P Sbjct: 93 KNYASAEYSTHVKYGYGRVEARLKAASGV-GLVTSLFTYSGQG-TGTSN----DEIDIEILGKDTTKMETNYFTNGVGQHSTIINLGFDASLDFHNYAFEWSPSFIKWYVDGKLVHTENGSRGTLPTSPGYIMVNLWSGSGPAEIWTGKFNYPGMP 242 The following BLAST results are available for this feature:
BLAST of NO26G01820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G01820 ID=NO26G01820|Name=NO26G01820|organism=Nannochloropsis oceanica|type=gene|length=3818bpback to top protein sequence of NO26G01820.1 >NO26G01820.1-protein ID=NO26G01820.1-protein|Name=NO26G01820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=305bpback to top Synonyms
Publications
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