NO26G01810, NO26G01810 (gene) Nannochloropsis oceanica

Overview
NameNO26G01810
Unique NameNO26G01810
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6880
Alignment locationchr26:612306..621584 +

Link to JBrowse

Properties
Property NameValue
DescriptionABC transporter B family member 25
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:612306..621584 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036875Znf_CCHC_sf
IPR027417P-loop_NTPase
IPR036640ABC1_TM_sf
IPR011527ABC1_TM_dom
IPR003439ABC_transporter-like
IPR003593AAA+_ATPase
IPR014891DWNN_domain
IPR001878Znf_CCHC
Vocabulary: Molecular Function
TermDefinition
GO:0042626ATPase activity, coupled to transmembrane movement of substances
GO:0016887ATPase activity
GO:0005524ATP binding
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0005634nucleus
Homology
BLAST of NO26G01810 vs. NCBI_GenBank
Match: XP_022337556.1 (ABC transporter B family member 25-like [Crassostrea virginica] >XP_022337557.1 ABC transporter B family member 25-like [Crassostrea virginica])

HSP 1 Score: 379.4 bits (973), Expect = 2.500e-101
Identity = 204/411 (49.64%), Postives = 266/411 (64.72%), Query Frame = 0
Query:  290 YCGRVNESYRLGVKKAVAYGVFTGGIGALAYLAMLIVLWYGGRLVIDG------DLSPGTLTSFLLYTIYIATGLSVLSGLVSEWMQAIGASERMFDLLDRVPAIPLHREGGXXXXXXXXXXXXXXXXXXXXXXXXXGEKEDKKQVVEEKQMEGKVFFDSVNFAYPSRPDVPVLQNFSLHVEPNATVALVGASGSGKSTVLSLLQRFYDPSAGQVMIDGKDMKEYDLTWLRRHCAVVSQEPVLFACSLKDNISYGLLAAQEDPFFSTSSSSPPSLPSSLPAMADIEAVARQANCHDFISGFPEGYDTLVGERGVRLSGGQKQRVAIARALLVNPKILMLDEATSSLDAESEHKVQEACDRLMVGRTVIVIAHRLSTVRNAAKIVVMGEGGIKNIGTHDELMETSDIYRQLI 695
            Y   + +S+ +G K A+AYG F G +G LAY ++ +VLWYGG+LV D        L+PG LTSFLLYT+ +A   +++S L  ++MQA+GAS R+FDLLDR+P +P   E G                                      Q++G+V F +V F YPSRP+  VL+N +  VEP   VALVG SGSGKST+++L++RFYDP AG +++   D+K  D  W R+  A+V QEP LFA S+KDNI+YG  A  +                      +IE VA+QAN H+FIS F EGYDTLVGERGVRLSGGQKQR+AIARAL++NP +L+LDEATS+LDAESEH VQEA DR M GRTVIVIAHRLSTVRNA K+VV+ +G I  +GTHDEL+  + +Y++L+
Sbjct:  435 YGEEIQKSFEVGKKLAIAYGAFEGIVGLLAYGSIAMVLWYGGKLVYDNAHGEYTGLTPGVLTSFLLYTLQVAMAFALMSALYGDFMQAVGASIRIFDLLDRIPDVP--TENGDVLY----------------------------------QLDGRVEFRNVFFTYPSRPETQVLKNITFSVEPGEMVALVGPSGSGKSTIINLIERFYDPDAGTIILGDMDLKMLDPQWFRKKIAMVGQEPTLFASSIKDNIAYGCCATDQ----------------------EIEDVAKQANAHEFISTFEEGYDTLVGERGVRLSGGQKQRIAIARALIMNPVLLLLDEATSALDAESEHLVQEAVDRAMKGRTVIVIAHRLSTVRNATKVVVIDKGEIAEMGTHDELIAHNGVYKRLV 787          
BLAST of NO26G01810 vs. NCBI_GenBank
Match: XP_013383419.1 (ABC transporter B family member 1-like, partial [Lingula anatina])

HSP 1 Score: 372.5 bits (955), Expect = 3.100e-99
Identity = 203/407 (49.88%), Postives = 260/407 (63.88%), Query Frame = 0
Query:  288 KRYCGRVNESYRLGVKKAVAYGVFTGGIGALAYLAMLIVLWYGGRLVIDGDLSPGTLTSFLLYTIYIATGLSVLSGLVSEWMQAIGASERMFDLLDRVPAIPLHREGGXXXXXXXXXXXXXXXXXXXXXXXXXGEKEDKKQVVEEKQMEGKVFFDSVNFAYPSRPDVPVLQNFSLHVEPNATVALVGASGSGKSTVLSLLQRFYDPSAGQVMIDGKDMKEYDLTWLRRHCAVVSQEPVLFACSLKDNISYGLLAAQEDPFFSTSSSSPPSLPSSLPAMADIEAVARQANCHDFISGFPEGYDTLVGERGVRLSGGQKQRVAIARALLVNPKILMLDEATSSLDAESEHKVQEACDRLMVGRTVIVIAHRLSTVRNAAKIVVMGEGGIKNIGTHDELMETSDIYRQLI 695
            + Y   +++SY++G K A+  G F G IG +AY A+++VLWYGG+LV +  LSPG LTSFLLYT+ +A   ++LS L  ++MQA+GAS R+FDL+DR P IP+  EGG                                Q+V+   MEG V F  V F YPSRPD  VL+  S  VEP   VALVG SG GKST++++++RFYDP +G + + G D+   D  W R+  ++VSQEP LFACS+KDNISYG     E                      ++   A+QAN H+FI GF E YDTLVGERGVRLSGGQKQRVAIARAL++NP IL+LDEATS+LDAESEH VQEA D  M GRTVIVIAHRLSTVRNA  + V+ +G I   GTH+EL+    +Y++L+
Sbjct:   88 QHYGSDIDKSYQVGKKLALVQGGFDGVIGIIAYGAIVLVLWYGGKLVNEKQLSPGILTSFLLYTLQVAMSFAMLSSLYGDFMQAVGASIRIFDLMDRKPEIPI--EGG-------------------------------SQIVD---MEGSVEFQDVYFTYPSRPDTQVLKGVSFKVEPGQVVALVGPSGGGKSTIVNMIERFYDPESGWIRLGGNDLSTLDPQWFRQQISMVSQEPTLFACSIKDNISYGKDCTLE----------------------EVVEAAKQANAHNFIMGFEEQYDTLVGERGVRLSGGQKQRVAIARALIMNPSILLLDEATSALDAESEHLVQEAIDHAMKGRTVIVIAHRLSTVRNANVVAVVDKGKIVEQGTHEELLAQDGVYKRLV 436          
BLAST of NO26G01810 vs. NCBI_GenBank
Match: EKC24407.1 (ATP-binding cassette sub-family B member 10, mitochondrial [Crassostrea gigas])

HSP 1 Score: 371.7 bits (953), Expect = 5.300e-99
Identity = 201/411 (48.91%), Postives = 263/411 (63.99%), Query Frame = 0
Query:  290 YCGRVNESYRLGVKKAVAYGVFTGGIGALAYLAMLIVLWYGGRLVIDG------DLSPGTLTSFLLYTIYIATGLSVLSGLVSEWMQAIGASERMFDLLDRVPAIPLHREGGXXXXXXXXXXXXXXXXXXXXXXXXXGEKEDKKQVVEEKQMEGKVFFDSVNFAYPSRPDVPVLQNFSLHVEPNATVALVGASGSGKSTVLSLLQRFYDPSAGQVMIDGKDMKEYDLTWLRRHCAVVSQEPVLFACSLKDNISYGLLAAQEDPFFSTSSSSPPSLPSSLPAMADIEAVARQANCHDFISGFPEGYDTLVGERGVRLSGGQKQRVAIARALLVNPKILMLDEATSSLDAESEHKVQEACDRLMVGRTVIVIAHRLSTVRNAAKIVVMGEGGIKNIGTHDELMETSDIYRQLI 695
            Y   + +SY +G K AVAYG F G +G LAY A+ +VLWYGG+LV D        L+PG LTSFLLYT+ +A   +++S L  ++MQA+GAS R+FDLLDR+P +P   E G                                      Q++G+V F  V F YPSRP+  VL++ +  VEP   VALVG SG GKST+++L++RFYDP +G++++   D+K  D  W R+  A+V QEP LFA S+KDNI+YG  A                          IE VA++AN H+FIS F EGY+TLVGERGVRLSGGQKQR+AIARAL++NP +L+LDEATS+LDAESEH VQEA DR M GRTVIVIAHRLSTVRNA K+VV+ +G I  +GTHD+L+  + +Y++L+
Sbjct:  451 YGDEIQKSYEVGKKLAVAYGAFEGLVGLLAYGAIAMVLWYGGKLVYDNTHGENTGLTPGVLTSFLLYTLQVAMAFALMSALYGDFMQAVGASIRIFDLLDRIPDVP--TENGDVLY----------------------------------QLDGRVEFQHVYFNYPSRPETKVLKDITFTVEPGEMVALVGPSGGGKSTIVNLIERFYDPDSGKILLGDVDLKTLDPQWFRKKIAMVGQEPTLFASSIKDNIAYGCSATD----------------------YQIEEVAKEANAHEFISTFEEGYNTLVGERGVRLSGGQKQRIAIARALIMNPVLLLLDEATSALDAESEHLVQEAVDRAMKGRTVIVIAHRLSTVRNATKVVVIDKGEIAEMGTHDDLIAKNGVYKRLV 803          
BLAST of NO26G01810 vs. NCBI_GenBank
Match: XP_011434464.1 (PREDICTED: ABC transporter B family member 25 isoform X2 [Crassostrea gigas])

HSP 1 Score: 371.7 bits (953), Expect = 5.300e-99
Identity = 201/411 (48.91%), Postives = 263/411 (63.99%), Query Frame = 0
Query:  290 YCGRVNESYRLGVKKAVAYGVFTGGIGALAYLAMLIVLWYGGRLVIDG------DLSPGTLTSFLLYTIYIATGLSVLSGLVSEWMQAIGASERMFDLLDRVPAIPLHREGGXXXXXXXXXXXXXXXXXXXXXXXXXGEKEDKKQVVEEKQMEGKVFFDSVNFAYPSRPDVPVLQNFSLHVEPNATVALVGASGSGKSTVLSLLQRFYDPSAGQVMIDGKDMKEYDLTWLRRHCAVVSQEPVLFACSLKDNISYGLLAAQEDPFFSTSSSSPPSLPSSLPAMADIEAVARQANCHDFISGFPEGYDTLVGERGVRLSGGQKQRVAIARALLVNPKILMLDEATSSLDAESEHKVQEACDRLMVGRTVIVIAHRLSTVRNAAKIVVMGEGGIKNIGTHDELMETSDIYRQLI 695
            Y   + +SY +G K AVAYG F G +G LAY A+ +VLWYGG+LV D        L+PG LTSFLLYT+ +A   +++S L  ++MQA+GAS R+FDLLDR+P +P   E G                                      Q++G+V F  V F YPSRP+  VL++ +  VEP   VALVG SG GKST+++L++RFYDP +G++++   D+K  D  W R+  A+V QEP LFA S+KDNI+YG  A                          IE VA++AN H+FIS F EGY+TLVGERGVRLSGGQKQR+AIARAL++NP +L+LDEATS+LDAESEH VQEA DR M GRTVIVIAHRLSTVRNA K+VV+ +G I  +GTHD+L+  + +Y++L+
Sbjct:  433 YGDEIQKSYEVGKKLAVAYGAFEGLVGLLAYGAIAMVLWYGGKLVYDNTHGENTGLTPGVLTSFLLYTLQVAMAFALMSALYGDFMQAVGASIRIFDLLDRIPDVP--TENGDVLY----------------------------------QLDGRVEFQHVYFNYPSRPETKVLKDITFTVEPGEMVALVGPSGGGKSTIVNLIERFYDPDSGKILLGDVDLKTLDPQWFRKKIAMVGQEPTLFASSIKDNIAYGCSATD----------------------YQIEEVAKEANAHEFISTFEEGYNTLVGERGVRLSGGQKQRIAIARALIMNPVLLLLDEATSALDAESEHLVQEAVDRAMKGRTVIVIAHRLSTVRNATKVVVIDKGEIAEMGTHDDLIAKNGVYKRLV 785          
BLAST of NO26G01810 vs. NCBI_GenBank
Match: XP_013415860.1 (ABC transporter B family member 25 isoform X1 [Lingula anatina] >XP_013415861.1 ABC transporter B family member 25 isoform X1 [Lingula anatina])

HSP 1 Score: 371.7 bits (953), Expect = 5.300e-99
Identity = 203/407 (49.88%), Postives = 260/407 (63.88%), Query Frame = 0
Query:  288 KRYCGRVNESYRLGVKKAVAYGVFTGGIGALAYLAMLIVLWYGGRLVIDGDLSPGTLTSFLLYTIYIATGLSVLSGLVSEWMQAIGASERMFDLLDRVPAIPLHREGGXXXXXXXXXXXXXXXXXXXXXXXXXGEKEDKKQVVEEKQMEGKVFFDSVNFAYPSRPDVPVLQNFSLHVEPNATVALVGASGSGKSTVLSLLQRFYDPSAGQVMIDGKDMKEYDLTWLRRHCAVVSQEPVLFACSLKDNISYGLLAAQEDPFFSTSSSSPPSLPSSLPAMADIEAVARQANCHDFISGFPEGYDTLVGERGVRLSGGQKQRVAIARALLVNPKILMLDEATSSLDAESEHKVQEACDRLMVGRTVIVIAHRLSTVRNAAKIVVMGEGGIKNIGTHDELMETSDIYRQLI 695
            + Y   +++SY++G K A+  G F G IG +AY A+++VLWYGG+LV +  LSPG LTSFLLYT+ +A   ++LS L  ++MQA+GAS R+FDL+DR P IP+  EGG                                Q+V+   MEG V F  V F YPSRPD  VL+  S  VEP   VALVG SG GKST++++++RFYDP +G + + G D+   D  W R+  ++VSQEP LFACS+KDNISYG     E                      ++   A+QAN H+FI GF E YDTLVGERGVRLSGGQKQRVAIARAL++NP IL+LDEATS+LDAESEH VQEA D  M GRTVIVIAHRLSTVRNA  + V+ +G I   GTH+EL+    +Y++L+
Sbjct:  430 QHYGSDIDKSYQVGKKLALVQGGFDGVIGIIAYGAIVLVLWYGGKLVNEKQLSPGILTSFLLYTLQVAMSFAMLSSLYGDFMQAVGASIRIFDLMDRKPEIPI--EGG-------------------------------SQIVD---MEGSVEFQDVFFTYPSRPDTQVLKGVSFKVEPGQVVALVGPSGGGKSTIVNMIERFYDPESGWIRLGGNDLTTLDPQWFRQQISMVSQEPTLFACSIKDNISYGKDCTLE----------------------EVVEAAKQANAHNFIMGFEEQYDTLVGERGVRLSGGQKQRVAIARALIMNPSILLLDEATSALDAESEHLVQEAIDHAMKGRTVIVIAHRLSTVRNANVVAVVDKGKIVEQGTHEELLAQDGVYKRLV 778          
BLAST of NO26G01810 vs. NCBI_GenBank
Match: XP_019924868.1 (PREDICTED: ABC transporter B family member 25 isoform X1 [Crassostrea gigas])

HSP 1 Score: 371.7 bits (953), Expect = 5.300e-99
Identity = 201/411 (48.91%), Postives = 263/411 (63.99%), Query Frame = 0
Query:  290 YCGRVNESYRLGVKKAVAYGVFTGGIGALAYLAMLIVLWYGGRLVIDG------DLSPGTLTSFLLYTIYIATGLSVLSGLVSEWMQAIGASERMFDLLDRVPAIPLHREGGXXXXXXXXXXXXXXXXXXXXXXXXXGEKEDKKQVVEEKQMEGKVFFDSVNFAYPSRPDVPVLQNFSLHVEPNATVALVGASGSGKSTVLSLLQRFYDPSAGQVMIDGKDMKEYDLTWLRRHCAVVSQEPVLFACSLKDNISYGLLAAQEDPFFSTSSSSPPSLPSSLPAMADIEAVARQANCHDFISGFPEGYDTLVGERGVRLSGGQKQRVAIARALLVNPKILMLDEATSSLDAESEHKVQEACDRLMVGRTVIVIAHRLSTVRNAAKIVVMGEGGIKNIGTHDELMETSDIYRQLI 695
            Y   + +SY +G K AVAYG F G +G LAY A+ +VLWYGG+LV D        L+PG LTSFLLYT+ +A   +++S L  ++MQA+GAS R+FDLLDR+P +P   E G                                      Q++G+V F  V F YPSRP+  VL++ +  VEP   VALVG SG GKST+++L++RFYDP +G++++   D+K  D  W R+  A+V QEP LFA S+KDNI+YG  A                          IE VA++AN H+FIS F EGY+TLVGERGVRLSGGQKQR+AIARAL++NP +L+LDEATS+LDAESEH VQEA DR M GRTVIVIAHRLSTVRNA K+VV+ +G I  +GTHD+L+  + +Y++L+
Sbjct:  438 YGDEIQKSYEVGKKLAVAYGAFEGLVGLLAYGAIAMVLWYGGKLVYDNTHGENTGLTPGVLTSFLLYTLQVAMAFALMSALYGDFMQAVGASIRIFDLLDRIPDVP--TENGDVLY----------------------------------QLDGRVEFQHVYFNYPSRPETKVLKDITFTVEPGEMVALVGPSGGGKSTIVNLIERFYDPDSGKILLGDVDLKTLDPQWFRKKIAMVGQEPTLFASSIKDNIAYGCSATD----------------------YQIEEVAKEANAHEFISTFEEGYNTLVGERGVRLSGGQKQRIAIARALIMNPVLLLLDEATSALDAESEHLVQEAVDRAMKGRTVIVIAHRLSTVRNATKVVVIDKGEIAEMGTHDDLIAKNGVYKRLV 790          
BLAST of NO26G01810 vs. NCBI_GenBank
Match: CAI99870.2 (putative ATP-binding cassette, sub-family B, member 10 [Brachidontes pharaonis])

HSP 1 Score: 367.5 bits (942), Expect = 1.000e-97
Identity = 200/414 (48.31%), Postives = 264/414 (63.77%), Query Frame = 0
Query:  287 VKRYCGRVNESYRLGVKKAVAYGVFTGGIGALAYLAMLIVLWYGGRLVID------GDLSPGTLTSFLLYTIYIATGLSVLSGLVSEWMQAIGASERMFDLLDRVPAIPLHREGGXXXXXXXXXXXXXXXXXXXXXXXXXGEKEDKKQVVEEKQMEGKVFFDSVNFAYPSRPDVPVLQNFSLHVEPNATVALVGASGSGKSTVLSLLQRFYDPSAGQVMIDGKDMKEYDLTWLRRHCAVVSQEPVLFACSLKDNISYGLLAAQEDPFFSTSSSSPPSLPSSLPAMADIEAVARQANCHDFISGFPEGYDTLVGERGVRLSGGQKQRVAIARALLVNPKILMLDEATSSLDAESEHKVQEACDRLMVGRTVIVIAHRLSTVRNAAKIVVMGEGGIKNIGTHDELMETSDIYRQLI 695
            V  Y   +NESYR+G + A+A G F G IG LA  A+ +VLWYGG+LV D        L+PG LTSFLLYT+ +A   + +S L  ++M+A+GAS R+F LL+R P +P   E G                                  +   ++ G+V F +V F YPSRP+  VL+N +  VEP   VALVG SG GKST+++L++RFYDP+ G + +D  D+KE D  W R+  ++VSQEP LFACS+K+NI++G+ A                       +++IE V +QAN HDFI  F E YDTLVGERGVRLSGGQKQR+AIARAL++NPK+L+LDEATS+LDAESEH VQEA DR M  RTVIVIAHRLSTVRNA+K++V+ +G I   GTHDEL+    +Y++L+
Sbjct:  430 VHNYGKEINESYRIGKQLALASGGFQGIIGVLAQGAIALVLWYGGKLVYDEAHGKHTGLTPGVLTSFLLYTLQVAMAFAFMSSLYGDFMKAVGASVRIFGLLERKPEVP--NENG----------------------------------LIPAELTGRVEFKNVTFTYPSRPETEVLKNITFTVEPGEMVALVGPSGGGKSTIVNLIERFYDPNGGTIYLDDYDLKELDPQWFRKKISMVSQEPTLFACSIKENIAFGINA----------------------ELSEIEDVCKQANAHDFIQTFEERYDTLVGERGVRLSGGQKQRIAIARALIMNPKLLLLDEATSALDAESEHLVQEAIDRAMKSRTVIVIAHRLSTVRNASKVIVIDKGTIAESGTHDELIAKDGVYKKLV 785          
BLAST of NO26G01810 vs. NCBI_GenBank
Match: PVD33086.1 (hypothetical protein C0Q70_08535 [Pomacea canaliculata])

HSP 1 Score: 364.8 bits (935), Expect = 6.500e-97
Identity = 198/401 (49.38%), Postives = 258/401 (64.34%), Query Frame = 0
Query:  294 VNESYRLGVKKAVAYGVFTGGIGALAYLAMLIVLWYGGRLVIDGDLSPGTLTSFLLYTIYIATGLSVLSGLVSEWMQAIGASERMFDLLDRVPAIPLHREGGXXXXXXXXXXXXXXXXXXXXXXXXXGEKEDKKQVVEEKQMEGKVFFDSVNFAYPSRPDVPVLQNFSLHVEPNATVALVGASGSGKSTVLSLLQRFYDPSAGQVMIDGKDMKEYDLTWLRRHCAVVSQEPVLFACSLKDNISYGLLAAQEDPFFSTSSSSPPSLPSSLPAMADIEAVARQANCHDFISGFPEGYDTLVGERGVRLSGGQKQRVAIARALLVNPKILMLDEATSSLDAESEHKVQEACDRLMVGRTVIVIAHRLSTVRNAAKIVVMGEGGIKNIGTHDELMETSDIYRQLI 695
            + +SY++G + A+A G F G IG LAY A+ +VLWYGG+LV +G+LS G LTSFLLYT+ +A    +LS L  ++MQA+GAS R+F LL+R P I                                   E+ K +     + G V F +V F YPSRPDV VL+  S  V+P   VALVG SG GKST++SL++RFYDP +G + +DG D+K  D  W R+  A+VSQEP LFA S++DNI+YG  A  E                      +I   A QAN H+FIS F +GY TLVGERGVRLSGGQKQR+AIARAL++NP +L+LDEATS+LDAESEH VQEA D  M  RTV+VIAHRLSTVRNA+K++V+ +G I  +GTHDEL++ + +Y++LI
Sbjct:  443 IEKSYQVGKQLALAQGTFEGVIGILAYGAITLVLWYGGKLVYEGNLSAGVLTSFLLYTLQVAIAFGLLSSLYGDFMQAVGASVRIFSLLERSPTI---------------------------------SSENGKIL---PNLNGYVEFKNVRFTYPSRPDVEVLKGISFTVKPGEMVALVGPSGGGKSTIVSLIERFYDPDSGTISLDGYDIKSLDALWFRQKIAMVSQEPTLFAFSIQDNIAYGCCATDE----------------------EITEAACQANAHEFISQFKDGYKTLVGERGVRLSGGQKQRIAIARALIINPVLLLLDEATSALDAESEHLVQEAIDHAMKHRTVVVIAHRLSTVRNASKVIVIDKGTIAEMGTHDELIQQNGVYKRLI 785          
BLAST of NO26G01810 vs. NCBI_GenBank
Match: XP_004993147.1 (ABC transporter B family protein [Salpingoeca rosetta] >EGD74247.1 ABC transporter B family protein [Salpingoeca rosetta])

HSP 1 Score: 362.8 bits (930), Expect = 2.500e-96
Identity = 199/405 (49.14%), Postives = 254/405 (62.72%), Query Frame = 0
Query:  290 YCGRVNESYRLGVKKAVAYGVFTGGIGALAYLAMLIVLWYGGRLVIDGDLSPGTLTSFLLYTIYIATGLSVLSGLVSEWMQAIGASERMFDLLDRVPAIPLHREGGXXXXXXXXXXXXXXXXXXXXXXXXXGEKEDKKQVVEEKQMEGKVFFDSVNFAYPSRPDVPVLQNFSLHVEPNATVALVGASGSGKSTVLSLLQRFYDPSAGQVMIDGKDMKEYDLTWLRRHCAVVSQEPVLFACSLKDNISYGLLAAQEDPFFSTSSSSPPSLPSSLPAMADIEAVARQANCHDFISGFPEGYDTLVGERGVRLSGGQKQRVAIARALLVNPKILMLDEATSSLDAESEHKVQEACDRLMVGRTVIVIAHRLSTVRNAAKIVVMGEGGIKNIGTHDELMETSDIYRQLI 695
            Y G +N SY +G K A+  G F G  GA A LA+L+VLWYGG LV    ++ G L+ FLLYT+ +A   + LS L  ++MQA+GAS R+F+L+DR P+I +   GG                                        + ++    VNF YPSRPD  VL + SL V   + VALVG SG GKST++SLL+RFYDP  GQ+++ GKD++  D  WL RH A+V QEPVLFA S+KDNI YG   A ++                     ++   A+QAN H FISGF E YDT VGERGVRLSGGQKQR+AIARALL+NP++L+LDEATS+LDAESEH VQEA DR MVGRTV+VIAHRLSTVR+A +++V+ +G I   GTHDEL+    IYR+L+
Sbjct:  397 YSGSINTSYGIGKKLALVQGGFAGITGAFAQLAILLVLWYGGTLVYHDHITTGVLSGFLLYTLQVAMAFAFLSSLYGDFMQALGASVRIFELMDRQPSIGI--TGGD----------------------------------APAHFDPEIELRGVNFRYPSRPDTLVLDDASLRVPTGSVVALVGPSGGGKSTIVSLLERFYDPEDGQILVGGKDIRSVDPAWLHRHVALVGQEPVLFAMSIKDNIKYGNATATDE---------------------EVIEAAKQANAHTFISGFDEQYDTKVGERGVRLSGGQKQRIAIARALLMNPQVLLLDEATSALDAESEHLVQEAIDRAMVGRTVLVIAHRLSTVRDADQVLVIEKGRIAERGTHDELIALDGIYRKLV 744          
BLAST of NO26G01810 vs. NCBI_GenBank
Match: AKC42141.1 (ABCB10-like protein, partial [Petromyzon marinus])

HSP 1 Score: 362.1 bits (928), Expect = 4.200e-96
Identity = 200/412 (48.54%), Postives = 264/412 (64.08%), Query Frame = 0
Query:  289 RYCGRVNESYRLGVKKAVAYGVFTGGIGALAYLAMLIVLWYGGRLVIDG-----DLSPGTLTSFLLYTIYIATGLSVLSGLVSEWMQAIGASERMFDLLDRVPAIPLHREGGXXXXXXXXXXXXXXXXXXXXXXXXXGEKEDKKQVVEEKQMEGKVFFDSVNFAYPSRPDVPVLQNFSLHVEPNATVALVGASGSGKSTVLSLLQRFYDPSAGQVMIDGKDMKEYDLTWLRRHCAVVSQEPVLFACSLKDNISYGLLAAQEDPFFSTSSSSPPSLPSSLPAMADIEAVARQANCHDFISGFPEGYDTLVGERGVRLSGGQKQRVAIARALLVNPKILMLDEATSSLDAESEHKVQEACDRLMVGRTVIVIAHRLSTVRNAAKIVVMGEGGIKNIGTHDELM-ETSDIYRQLI 695
            +Y   V  S+ +G K A+A G F+G +G +A  A+++VLWYGG+LV +       +S GTLT+F+LYT+ +A G ++L+ L  ++MQA+GAS+R+F+LLDR P IP    GG                                +     +M+G+V F+ ++F YPSRPD PVLQ  S  VEP   VALVG SG GKST+++LLQRFYDPSAG ++  G D++E D  W R+  AVVSQEPVLFA ++  NISYG  A  E                      ++   A+QAN HDFI  F EGY+TLVGERGVRLSGGQKQR+AIARAL++NP +L+LDEATS+LDAESEH VQEA DR M  RTV+VIAHRLSTVR+A+++VV+ +G I   GTHD L+     +YR+L+
Sbjct:  402 QYDSDVQRSFNIGRKIALAEGAFSGLVGTVAQGAVVLVLWYGGKLVYENLHGQTGISVGTLTAFMLYTLNVAMGFALLASLYGDFMQAVGASQRVFELLDRQPRIP--NTGG--------------------------------RAPPSVRMDGRVSFNDIHFCYPSRPDTPVLQGVSFSVEPGTVVALVGPSGGGKSTIVALLQRFYDPSAGSIIFGGTDLRELDPQWFRQTMAVVSQEPVLFATTIHKNISYGREATFE----------------------EVVEAAKQANAHDFILSFEEGYETLVGERGVRLSGGQKQRIAIARALIMNPVLLLLDEATSALDAESEHLVQEAIDRAMQDRTVLVIAHRLSTVRSASQVVVVDKGQIVERGTHDVLLAHQGGVYRRLV 757          
The following BLAST results are available for this feature:
BLAST of NO26G01810 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_022337556.12.500e-10149.64ABC transporter B family member 25-like [Crassostr... [more]
XP_013383419.13.100e-9949.88ABC transporter B family member 1-like, partial [L... [more]
EKC24407.15.300e-9948.91ATP-binding cassette sub-family B member 10, mitoc... [more]
XP_011434464.15.300e-9948.91PREDICTED: ABC transporter B family member 25 isof... [more]
XP_013415860.15.300e-9949.88ABC transporter B family member 25 isoform X1 [Lin... [more]
XP_019924868.15.300e-9948.91PREDICTED: ABC transporter B family member 25 isof... [more]
CAI99870.21.000e-9748.31putative ATP-binding cassette, sub-family B, membe... [more]
PVD33086.16.500e-9749.38hypothetical protein C0Q70_08535 [Pomacea canalicu... [more]
XP_004993147.12.500e-9649.14ABC transporter B family protein [Salpingoeca rose... [more]
AKC42141.14.200e-9648.54ABCB10-like protein, partial [Petromyzon marinus][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR037ncniR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR046ngnoR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G01810.1NO26G01810.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO26G01810.2NO26G01810.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|183384gene_8021Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G01810.1NO26G01810.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO26G01810.2NO26G01810.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G01810 ID=NO26G01810|Name=NO26G01810|organism=Nannochloropsis oceanica|type=gene|length=6880bp
CCCTCCCTTCCACCCTCCCTCCCTCCCGCACTGGCCATGGCCTGCTATCG
GCGGCTATACACCTTTCTACGTTTCAGAGGTTTTAGGGGGAGAAGGATGT
AATTTATTAGAAAAAGGATTTTTGGGATTAGAAGAAGATTGAATTGTATT
AGGAAAAGGGTGTATTGTATTGGATGGTGGTTGATTGTATTAGAAAAGGT
TATATTGGATAAGAAGAAAGATGTGATGTGTTTTGTATCAACGGCTTAGA
GGAAAGAGAGAGAAAGAGAAAAAGAGATCGAGAGAGACAGAGAATTAGGG
AGAGGAATTTAAAATTATTTAATAACAGAAAAGGGAAAAGCGAGAGTGAA
GAATGGCACCCGAAAGATAAGATGGCATCACGCACGCTCACACATATACA
CCCATCCTCTCAGCCACACATGCACAAACCCGCCCTCTACTATCACTTCA
TCTCTCCCTCTCTCCTCCATCTCTCTCTTCCCCTCCATCTCCCTAAACCA
GCCACCTTACACCCCTCCCTCCTTCCGTCCCTCCCTTCCTCTCTCTCTCC
TTCCCTCCCTCCCTCCCTTCCTCAGGGCCTCGGGCGGATGGATGCCGCCT
CAGACGATCGTGCTACATGGAAAGGCGCACCAGCCAGCGACACGACAAAC
ACCTCTATCATCATCATCATCACCGTCATCAGAAACAGCAGGAGGAGGGA
AGGAAGGAGGGAAGGAGGGAGGGAAGAGCAGCACGCCCACTATCAGgtat
gattcctataacaggagggccactaaggagggcgggagggagggcgggag
aagtcgttttatttgcttatgctgtcaagtgttggaactaagccttgaaa
tgcgaaaaaggagagggaagagtagcagcagtttcagcagtagcagcagc
agcaacagcagctgttgtagtcgtagtagcagcagcaccaggaacaaaaa
atcacatccacaacaacgacaacaccagcagtgctcctttcattcccaac
aacaagaacaagaacaacgacaacaacaatgatcatataaatatgtatcg
cagcagcagcagtgctatccacgcacagggaaggaacgacgaaaagaaaa
aacatgtcagacgaagcccagacagcttcctgcgtccactctatcactta
cccctccctccctccctccctccctccctccctccctccctccttcatat
cactcgatggagtcccaatggtccgtccgtcgtcctccaccctgctggca
aattcatgttccctccctccctccctccctccctcccttccttctttcca
cacacgccctcaaatccaatagCACGACAAATTCCCCCACCCCGGCGGTC
AAAGTCGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGGGAAGGCATCCA
ACTGCCGACTCCGTCCATCTCGACCCCAGCGCCGAGgtacagtggagggg
gagggagggagggagggagggagggagggtaggaggaaagcttgttgcac
actctcgctctggccccctaagccttctcctccaattactgtgaatccca
ttcgtagcccccctccctccccctctccccccctccctccttctgatcca
ctcacattcttagccgcccgccctccctcctcccctccctttccccctcc
cccctccctcagCACCGGCGCCGACGAGCTGGCAGCTTTGGATGCCGCTG
TACAAGAGGCCGAGTCGTACGGgtaggtggagggagggaggaagggaggg
agggaggaagagggggagggagagggtcgaaagctgggcctgttggtagg
tgatgaagagaggaaaggagggagggagggagggaaggagggagggaggc
aaggagagcgcagaaggtggcgtctgtgtcatgcttcactctcactccat
cgaatcgcccgcccgccgtccctccttccctccctccctccccccctccc
tccctccctccctccctctagGGCTGGCCATGGGAACATGCGCACGAGCA
ACAAGCTCTTCCCGGGCGGTCGCGGCGGGCGAGGGGGAGCAGGACGTGGT
Ggtatgtatgtctttccctccctccctccctccctccctccctccctccc
ctcagttcacccgctctcctcatggtttatttgacgtttttccggccccc
ctcgtcctctcctttttcactctcacgatcctcctccctcccccctccct
ccctccctcctttcccccttccctcccttcctccctcccccttcctcagG
CGGCGGGCCTCGATCCCTCGGCCTCCGTCCTGGCACTGTTTGCCACAAAT
GCGGAAAAGAGGGTCATCTCGTCCGCTTCTGTCCTATGCTGAATAATCCC
GACTTCCGGAAGGATCCTGTCAAGgtacgcctcgccctccctccttccct
cctttctaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnggagggagggagggattttttttaactacctcatgtgctc
ctgtcacctctcagaggctttggctttcatcccctccctcccttctttcc
ttcctctttccgtccttccttattcctcccttcctgtcacctcctctccc
tgatatcaatgtctccttgaccctcttcctcccctccctccctcataagG
TGGAGGTAAAGCGGTACTGCGGCCGCGTGAATGAGTCCTACAGGCTGGGG
GTCAAAAAGGCCGTCGCGTACGGAGTCTTCACCGGCGgtgaggagggagg
gagggagggagggagggagggagggagggagggagattctcgtacacgct
ttctcttgcccattttttgggctcttcctcggcatggtgtatacatatat
acatcaatatatatacaccaaatatatatctacacatatggtgtatatat
acacggtgagagggcgttaagactaggtcgtcctctcgtgtggtccgaag
ccattattcctatatgtatacatgtatacaccaaatatttataaatatat
gtatatatatatgggaatatagtttttcctgacttgtgtccaactttatc
taatacaatgcagGCATCGGGGCTTTGGCCTACCTGGCCATGCTCATAGT
CCTTTGGTACGGGGGTCGCCTCGTCATCGATGgtgagagggagggaagga
ggcagggagggggggaaggaggaacgctctacagatctataaatgtatgt
tccatccaccacccatccaccctccctccctccctccctccctccctccc
tccctgcagGTGATCTCTCCCCTGGCACTCTGACCTCCTTCCTCCTCTAC
ACCATCTATATCGCCACGGGCCTCTCCGTGCTCTCTGGCCTCGTCTCCGA
gtaggttcttgccctccctccctccctcccttcctcccttgcttccctcc
ctcgcattcctcccttccgtcctgctgctcgtctctccttctcttttctt
ccctgtcctccctttctccttctcttcctcttccctcctaaaagtgcaac
ccatggacactccccctccctccctccctccctccctccctccttccctt
cctccagGTGGATGCAGGCCATCGGGGCTTCCGAGAGAATGTTCGACCTC
CTTGACCGCGTGCCTGCCATCCCCCTGCACAGGGAGGGAGGGAGGGAGGG
AAGGAGGGAGGGCGGGGCCCAGGCAAAGGCAGAGAGTGCGGTGGAGGGAG
GGGGATATGGGGGAAAGGGTGAGAAGGAGGATAAGAAGCAGGTGGTGGAG
GAGAAGCAGATGGAAGGGAAGgtaggtctcgtgtgcgtgtgtgatggtgt
ttgtcgctgaagatcttcccctctccctcttcctctccctcctccccccc
ctttttcctgcagttggctcggtgcggtggttggtgctggtcatggctcg
tcaccctctctccctttccctccctccctccctcccttcctccctccctc
cctgcctcgcccagGTTTTCTTTGACAGCGTCAATTTCGCTTACCCCTCG
CGACCCGATGTGCCGGTGCTCCAAAATTTCTCTCTTCACGTAGAGCCCAA
CGCCACAGTGGCCTTGGTTGGTGCCAGgtagggcgagagggagggaggga
tggagggactcacgatggtacggcgcgcgaaacacatatgctgacatttt
ctattatattaatttattgataattattattattattattattattatta
ttattattattattattattattattattattattattattattattatt
attattattattattattattattattattattattattattattattat
tattattattattattattattattattattattattattattattatta
ttattattattattattattattattactattactattatttctattatt
attattattattattatttatttattattatttatttcttttcatcattt
ttgtcacttctctcatgatcttttctactcgtacagTGGCAGCGGCAAGT
CCACCGTCCTCTCCCTCCTTCAGCGCTTCTACGACCCGTCCGCCGGCCAG
GTCATGATAGACGGCAAAGACATGAAAGAGgtacatcctccctctctccc
gcattccctccttctccactcttcctgttctctcacatccttcctccatc
gcactcccatcctccctttcccttcccctccttctcgctcacaccttccc
tactctctcacaccctccctccctccctccgtcagTACGACCTGACGTGG
CTTCGGCGCCACTGTGCGGTCGTCTCCCAAGAGCCCGTCTTGTTCGCCTG
CTCTCTGgtgcggagggagggagaggtggacgaaggaagggaaggaggga
ggaaaagaagaggtcaaagcagaggctgtatggactttcatccccactac
ctcatccaccccttgcctccccctctccctcccctcatccccctcccacc
agAAGGACAACATTTCCTATGGCCTGCTTGCGGCCCAGGAGGACCCCTTC
TTCTCCACCTCGTCCTCCTCCCCGCCCTCCCTCCCTTCCTCCCTCCCTGC
CATGGCTGACATCGAGGCTGTGGCCCGGCAGGCCAATTGCCACGATTTCA
TCTCAGGCTTCCCCGAGgtaccgtcgctgtcctcattccttccctctctc
cctccctccctccactgttctgaagcacgcgttccttgtatgaacttcgc
atctttcctttctccctccctccctccctccctccctccctccctccctt
cccctctccctccttcctttctctttctctttctctttccttggctgtgc
ttgctccttcctctcccgcgtcctccaactcactttctttccctccctcc
ctccctccctccctccctccctagGGCTACGACACACTGGTGGGAGAACG
CGGCGTGCGACTCAGTGGTGGCCAGgtggggagggagggagggagggagg
gagggagggagggagggaggggaggaacagggtggctgtgtatctcatcc
cacgaccccctgctgcctgtctgtcaacgcctgttgccacctcattcatt
cattcccttcatttgtattcatacatatacatatatatatatatatatat
atataaatataccccaatctgtctatctgtccgtccctcaccccctcctg
ccggccttcacaatcctaaatcaatttcctcccacgcagaaacaaagtcc
gtctctccccaatcaactccccaattaatttcctaatcaatttcctaaat
tttctaatcatttcccaaacaactccctaatcaactccctaatcaattct
ttttccacagAAACAAAGGGTCGCGATTGCCAGGGCCCTGCTCGTCAATC
CCAAGgtacacaagtgaagcgtgacgcagcccaccctcccttcctccctc
ccttcattttgacaactatgagtcatcaaagctcaacgaaacccctccct
cccttcctccatccttttctcccttggattctgacgcctatttctttcgt
cccttctcacctttcctccctccttcagATTCTAATGCTGGATGAAGCCA
CGTCTTCCCTCGACGCCGAGAGCGAGCATAAAGTCCAAGAGGCCTGTGAC
AGGCTCATGgtagggagggagggagggagggagggggggggaggggggtt
gttgagttttgatgactcatatttatcaagatgaagggagggagggaggg
agggagggagtgaaggaggacgaggtgtacaagcccttctattccttcta
tctttctctttccctctcgcgctctctcgctctccctctttcgcatacac
gcgcacacacacaaataaacctacgaccaacacactcatttgaagtacta
caaatgcactcacgcaccatctccctccagGTGGGTCGCACCGTGATTGT
CATCGCGCACCGCCTCTCGACCGTCCGAAATGCGGCCAAGATCGTGGTTA
TGGGCGAGGGCGGGATCAAGgtgaggggccaagcgagggagggaaggaga
aagggagatgccgactcgtcttgtctgtggcccatacggtccttgttggc
cagatccttatttcccaacggcatgggtctgcttaccgcctttccctccc
tccctccctccctccctctccagAATATTGGCACACACGACGAGTTGATG
GAAACGTCCGACATCTACCGCCAGCTCATTCGCCGTCAGATCGTTTCGTC
GTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCGCCACCGCCG
CCACCGCCGCCGCCGCCTCCTCCTGTGACAAGGACGAGAACAGAGAAGCA
GACGGCTTGCCACCATCATCGTCATCATAG
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protein sequence of NO26G01810.1

>NO26G01810.1-protein ID=NO26G01810.1-protein|Name=NO26G01810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=744bp
MSSVLHYRFKTATETNSLRFEGHSLRVFDIKSAIVAEKRLDKGLDFDLEL
SNPQTKEVYLDETKSIDKNSTVLVKRVAAPRGSVGLLARLKANTPLTPQN
MASGGWMPPQTIVLHGKAHQPATRQTPLSSSSSPSSETAGGGKEGGKEGG
KSSTPTISTTNSPTPAVKVEEGREEGREEGEGIQLPTPSISTPAPSTGAD
ELAALDAAVQEAESYGAGHGNMRTSNKLFPGGRGGRGGAGRGGGGPRSLG
LRPGTVCHKCGKEGHLVRFCPMLNNPDFRKDPVKVEVKRYCGRVNESYRL
GVKKAVAYGVFTGGIGALAYLAMLIVLWYGGRLVIDGDLSPGTLTSFLLY
TIYIATGLSVLSGLVSEWMQAIGASERMFDLLDRVPAIPLHREGGREGRR
EGGAQAKAESAVEGGGYGGKGEKEDKKQVVEEKQMEGKVFFDSVNFAYPS
RPDVPVLQNFSLHVEPNATVALVGASGSGKSTVLSLLQRFYDPSAGQVMI
DGKDMKEYDLTWLRRHCAVVSQEPVLFACSLKDNISYGLLAAQEDPFFST
SSSSPPSLPSSLPAMADIEAVARQANCHDFISGFPEGYDTLVGERGVRLS
GGQKQRVAIARALLVNPKILMLDEATSSLDAESEHKVQEACDRLMVGRTV
IVIAHRLSTVRNAAKIVVMGEGGIKNIGTHDELMETSDIYRQLIRRQIVS
SSSSSSSSSSSSSSATAATAAAASSCDKDENREADGLPPSSSS*
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protein sequence of NO26G01810.2

>NO26G01810.2-protein ID=NO26G01810.2-protein|Name=NO26G01810.2|organism=Nannochloropsis oceanica|type=polypeptide|length=638bp
MPPQTIVLHGKAHQPATRQTPLSSSSSPSSETAGGGKEGGKEGGKSSTPT
ISTTNSPTPAVKVEEGREEGREEGEGIQLPTPSISTPAPSTGADELAALD
AAVQEAESYGAGHGNMRTSNKLFPGGRGGRGGAGRGGGGPRSLGLRPGTV
CHKCGKEGHLVRFCPMLNNPDFRKDPVKVEVKRYCGRVNESYRLGVKKAV
AYGVFTGGIGALAYLAMLIVLWYGGRLVIDGDLSPGTLTSFLLYTIYIAT
GLSVLSGLVSEWMQAIGASERMFDLLDRVPAIPLHREGGREGRREGGAQA
KAESAVEGGGYGGKGEKEDKKQVVEEKQMEGKVFFDSVNFAYPSRPDVPV
LQNFSLHVEPNATVALVGASGSGKSTVLSLLQRFYDPSAGQVMIDGKDMK
EYDLTWLRRHCAVVSQEPVLFACSLKDNISYGLLAAQEDPFFSTSSSSPP
SLPSSLPAMADIEAVARQANCHDFISGFPEGYDTLVGERGVRLSGGQKQR
VAIARALLVNPKILMLDEATSSLDAESEHKVQEACDRLMVGRTVIVIAHR
LSTVRNAAKIVVMGEGGIKNIGTHDELMETSDIYRQLIRRQIVSSSSSSS
SSSSSSSSATAATAAAASSCDKDENREADGLPPSSSS*
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Synonyms
Publications