NO26G01810.1, NO26G01810.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO26G01810.1
Unique Name	NO26G01810.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2830
Alignment location	chr26:612306..621584 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr26	genome	chr26:612306..621584 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO26G01810.1 vs.
Match: XP_013383419.1 (ABC transporter B family member 1-like, partial [Lingula anatina])

HSP 1 Score: 374.4 bits (960), Expect = 8.200e-100
Identity = 205/417 (49.16%), Postives = 268/417 (64.27%), Query Frame = 0

Query:  288 KRYCGRVNESYRLGVKKAVAYGVFTGGIGALAYLAMLIVLWYGGRLVIDGDLSPGTLTSFLLYTIYIATGLSVLSGLVSEWMQAIGASERMFDLLDRVPAIPLHREGGREGRREGGAQAKAESAVEGGGYGGKGEKEDKKQVVEEKQMEGKVFFDSVNFAYPSRPDVPVLQNFSLHVEPNATVALVGASGSGKSTVLSLLQRFYDPSAGQVMIDGKDMKEYDLTWLRRHCAVVSQEPVLFACSLKDNISYGLLAAQEDPFFSTSSSSPPSLPSSLPAMADIEAVARQANCHDFISGFPEGYDTLVGERGVRLSGGQKQRVAIARALLVNPKILMLDEATSSLDAESEHKVQEACDRLMVGRTVIVIAHRLSTVRNAAKIVVMGEGGIKNIGTHDELMETSDIYRQLIRRQIVSSSSS 705
            + Y   +++SY++G K A+  G F G IG +AY A+++VLWYGG+LV +  LSPG LTSFLLYT+ +A   ++LS L  ++MQA+GAS R+FDL+DR P IP                      +EGG            Q+V+   MEG V F  V F YPSRPD  VL+  S  VEP   VALVG SG GKST++++++RFYDP +G + + G D+   D  W R+  ++VSQEP LFACS+KDNISYG     E                      ++   A+QAN H+FI GF E YDTLVGERGVRLSGGQKQRVAIARAL++NP IL+LDEATS+LDAESEH VQEA D  M GRTVIVIAHRLSTVRNA  + V+ +G I   GTH+EL+    +Y++L+ RQ+++ +++
Sbjct:   88 QHYGSDIDKSYQVGKKLALVQGGFDGVIGIIAYGAIVLVLWYGGKLVNEKQLSPGILTSFLLYTLQVAMSFAMLSSLYGDFMQAVGASIRIFDLMDRKPEIP----------------------IEGGS-----------QIVD---MEGSVEFQDVYFTYPSRPDTQVLKGVSFKVEPGQVVALVGPSGGGKSTIVNMIERFYDPESGWIRLGGNDLSTLDPQWFRQQISMVSQEPTLFACSIKDNISYGKDCTLE----------------------EVVEAAKQANAHNFIMGFEEQYDTLVGERGVRLSGGQKQRVAIARALIMNPSILLLDEATSALDAESEHLVQEAIDHAMKGRTVIVIAHRLSTVRNANVVAVVDKGKIVEQGTHEELLAQDGVYKRLVLRQLMAGATN 446

The following BLAST results are available for this feature:

BLAST of NO26G01810.1 vs.

BLAST of NO26G01810.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_013383419.1	8.200e-100	49.16	ABC transporter B family member 1-like, partial [L...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO26G01810	NO26G01810	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO26G01810.1	NO26G01810.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO26G01810.1.cds1	NO26G01810.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01810.1.cds2	NO26G01810.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01810.1.cds3	NO26G01810.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01810.1.cds4	NO26G01810.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01810.1.cds5	NO26G01810.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01810.1.cds6	NO26G01810.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01810.1.cds7	NO26G01810.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01810.1.cds8	NO26G01810.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01810.1.cds9	NO26G01810.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01810.1.cds10	NO26G01810.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01810.1.cds11	NO26G01810.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01810.1.cds12	NO26G01810.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01810.1.cds13	NO26G01810.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01810.1.cds14	NO26G01810.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01810.1.cds15	NO26G01810.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01810.1.cds16	NO26G01810.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01810.1.cds17	NO26G01810.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01810.1.cds18	NO26G01810.1.cds18	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01810.1.cds19	NO26G01810.1.cds19	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01810.1.cds20	NO26G01810.1.cds20	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO26G01810.1.cds21	NO26G01810.1.cds21	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr26:612306..621584+
coding sequence from alignment at chr26:612306..621584+

mRNA sequence

>NO26G01810.1 ID=NO26G01810.1|Name=NO26G01810.1|organism=Nannochloropsis oceanica|type=mRNA|length=2830bp
TGGCGATGTGCCAGCCTGCCAGGGCAGAGAACTAATCTGAATTGGAAAGG
AATTTAGGGCTGTCTTGCCCCTGGACGACTCACTCTCCAACCCCGGAGCC
TCTGCAGCACACAATTAAGCATGCATCTCCCTCTTCTGCTTTCCCTTATT
TACTTAGTCCTGGTGCCGGCACGGGCAAGTCAGGAGACAAGCACCACTGG
GCATGATGATGATGGTCTTGCTTTTCACGATGGCTGTGCTTGTCCGTGCT
TTGGACCTACATTACACCGCACAATCGTGCCGCACCACACAATACACACA
CATACATGCACAGAGACACGGACGGCCAGGGCATTTCCTGTCCCTCCATG
CTGACCTGGCAGTGCTGGTGGCCCTTCTTGCCCAGCGCGCTGCTCTGTCT
CCTTGCCCCTTCTCACCACACTTCTGGCTTATCCATACCACGGAATCACA
CAGGCACGGATGCGTTTCTTATAATTAAGAGCAAGGAGAGGAATTTCGAG
TGAGCAGGCGAGCTAGAGACGGAGATAGAGAAAGAGGAGGGGGAGATATA
AAAACACCACCAAAGAAGAAAAGAAACGAGGCTACACACCCTTCCACCAT
GTCGTCTGTGCTCCATTACCGGTTCAAGACGGCCACGGAGACCAACTCCC
TGCGCTTTGAAGGACACAGCTTGCGGGTGTTTGATATAAAATCGGCCATC
GTCGCAGAGAAGCGGCTGGACAAAGGCCTAGATTTCGATTTAGAGCTTTC
TAACCCACAGACTAAGGAAGTATATCTTGACGAAACCAAGTCCATCGACA
AGAACAGCACCGTGCTAGTAAAGCGTGTGGCGGCTCCCCGGGGGTCAGTG
GGGCTGCTGGCGCGGCTGAAGGCTAACACGCCGCTGACACCGCAAAACAT
GGCCTCGGGCGGATGGATGCCGCCTCAGACGATCGTGCTACATGGAAAGG
CGCACCAGCCAGCGACACGACAAACACCTCTATCATCATCATCATCACCG
TCATCAGAAACAGCAGGAGGAGGGAAGGAAGGAGGGAAGGAGGGAGGGAA
GAGCAGCACGCCCACTATCAGCACGACAAATTCCCCCACCCCGGCGGTCA
AAGTCGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGGGAAGGCATCCAA
CTGCCGACTCCGTCCATCTCGACCCCAGCGCCGAGCACCGGCGCCGACGA
GCTGGCAGCTTTGGATGCCGCTGTACAAGAGGCCGAGTCGTACGGGGCTG
GCCATGGGAACATGCGCACGAGCAACAAGCTCTTCCCGGGCGGTCGCGGC
GGGCGAGGGGGAGCAGGACGTGGTGGCGGCGGGCCTCGATCCCTCGGCCT
CCGTCCTGGCACTGTTTGCCACAAATGCGGAAAAGAGGGTCATCTCGTCC
GCTTCTGTCCTATGCTGAATAATCCCGACTTCCGGAAGGATCCTGTCAAG
GTGGAGGTAAAGCGGTACTGCGGCCGCGTGAATGAGTCCTACAGGCTGGG
GGTCAAAAAGGCCGTCGCGTACGGAGTCTTCACCGGCGGCATCGGGGCTT
TGGCCTACCTGGCCATGCTCATAGTCCTTTGGTACGGGGGTCGCCTCGTC
ATCGATGGTGATCTCTCCCCTGGCACTCTGACCTCCTTCCTCCTCTACAC
CATCTATATCGCCACGGGCCTCTCCGTGCTCTCTGGCCTCGTCTCCGAGT
GGATGCAGGCCATCGGGGCTTCCGAGAGAATGTTCGACCTCCTTGACCGC
GTGCCTGCCATCCCCCTGCACAGGGAGGGAGGGAGGGAGGGAAGGAGGGA
GGGCGGGGCCCAGGCAAAGGCAGAGAGTGCGGTGGAGGGAGGGGGATATG
GGGGAAAGGGTGAGAAGGAGGATAAGAAGCAGGTGGTGGAGGAGAAGCAG
ATGGAAGGGAAGGTTTTCTTTGACAGCGTCAATTTCGCTTACCCCTCGCG
ACCCGATGTGCCGGTGCTCCAAAATTTCTCTCTTCACGTAGAGCCCAACG
CCACAGTGGCCTTGGTTGGTGCCAGTGGCAGCGGCAAGTCCACCGTCCTC
TCCCTCCTTCAGCGCTTCTACGACCCGTCCGCCGGCCAGGTCATGATAGA
CGGCAAAGACATGAAAGAGTACGACCTGACGTGGCTTCGGCGCCACTGTG
CGGTCGTCTCCCAAGAGCCCGTCTTGTTCGCCTGCTCTCTGAAGGACAAC
ATTTCCTATGGCCTGCTTGCGGCCCAGGAGGACCCCTTCTTCTCCACCTC
GTCCTCCTCCCCGCCCTCCCTCCCTTCCTCCCTCCCTGCCATGGCTGACA
TCGAGGCTGTGGCCCGGCAGGCCAATTGCCACGATTTCATCTCAGGCTTC
CCCGAGGGCTACGACACACTGGTGGGAGAACGCGGCGTGCGACTCAGTGG
TGGCCAGAAACAAAGGGTCGCGATTGCCAGGGCCCTGCTCGTCAATCCCA
AGATTCTAATGCTGGATGAAGCCACGTCTTCCCTCGACGCCGAGAGCGAG
CATAAAGTCCAAGAGGCCTGTGACAGGCTCATGGTGGGTCGCACCGTGAT
TGTCATCGCGCACCGCCTCTCGACCGTCCGAAATGCGGCCAAGATCGTGG
TTATGGGCGAGGGCGGGATCAAGAATATTGGCACACACGACGAGTTGATG
GAAACGTCCGACATCTACCGCCAGCTCATTCGCCGTCAGATCGTTTCGTC
GTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCGCCACCGCCG
CCACCGCCGCCGCCGCCTCCTCCTGTGACAAGGACGAGAACAGAGAAGCA
GACGGCTTGCCACCATCATCGTCATCATAG

protein sequence of NO26G01810.1

>NO26G01810.1-protein ID=NO26G01810.1-protein|Name=NO26G01810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=744bp
MSSVLHYRFKTATETNSLRFEGHSLRVFDIKSAIVAEKRLDKGLDFDLEL
SNPQTKEVYLDETKSIDKNSTVLVKRVAAPRGSVGLLARLKANTPLTPQN
MASGGWMPPQTIVLHGKAHQPATRQTPLSSSSSPSSETAGGGKEGGKEGG
KSSTPTISTTNSPTPAVKVEEGREEGREEGEGIQLPTPSISTPAPSTGAD
ELAALDAAVQEAESYGAGHGNMRTSNKLFPGGRGGRGGAGRGGGGPRSLG
LRPGTVCHKCGKEGHLVRFCPMLNNPDFRKDPVKVEVKRYCGRVNESYRL
GVKKAVAYGVFTGGIGALAYLAMLIVLWYGGRLVIDGDLSPGTLTSFLLY
TIYIATGLSVLSGLVSEWMQAIGASERMFDLLDRVPAIPLHREGGREGRR
EGGAQAKAESAVEGGGYGGKGEKEDKKQVVEEKQMEGKVFFDSVNFAYPS
RPDVPVLQNFSLHVEPNATVALVGASGSGKSTVLSLLQRFYDPSAGQVMI
DGKDMKEYDLTWLRRHCAVVSQEPVLFACSLKDNISYGLLAAQEDPFFST
SSSSPPSLPSSLPAMADIEAVARQANCHDFISGFPEGYDTLVGERGVRLS
GGQKQRVAIARALLVNPKILMLDEATSSLDAESEHKVQEACDRLMVGRTV
IVIAHRLSTVRNAAKIVVMGEGGIKNIGTHDELMETSDIYRQLIRRQIVS
SSSSSSSSSSSSSSATAATAAAASSCDKDENREADGLPPSSSS*

mRNA from alignment at chr26:612306..621584+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO26G01810.1 ID=NO26G01810.1|Name=NO26G01810.1|organism=Nannochloropsis oceanica|type=mRNA|length=9279bp|location=Sequence derived from alignment at chr26:612306..621584+ (Nannochloropsis oceanica)
TGGCGATGTGCCAGCCTGCCAGGGCAGAGAACTAATCTGAATTGGAAAGG
AATTTAGGGCTGTCTTGCCCCTGGACGACTCACTCTCCAACCCCGGAGCC
TCTGCAGCACACAATTAAGCATGCATCTCCCTCTTCTGCTTTCCCTTATT
TACTTAGTCCTGGTGCCGGCACGGGCAAGTCAGGAGACAAGCACCACTGG
GCATGATGATGATGGTCTTGCTTTTCACGATGGCTGTGCTTGTCCGTGCT
TTGGACCTACATTACACCGCACAATCGTGCCGCACCACACAATACACACA
CATACATGCACAGAGACACGGACGGCCAGGGCATTTCCTGTCCCTCCATG
CTGACCTGGCAGTGCTGGTGGCCCTTCTTGCCCAGCGCGCTGCTCTGTCT
CCTTGCCCCTTCTCACCACACTTCTGGCTTATCCATACCACGGAATCACA
CAGGCACGGATGCGTTTCTTATAATTAAGAGCAAGGAGAGGAATTTCGAG
TGAGCAGGCGAGCTAGAGACGGAGATAGAGAAAGAGGAGGGGGAGATATA
AAAACACCACCAAAGAAGAAAAGAAACGAGGCTACACACCCTTCCACCAT
GTCGTCTGTGCTCCATTACCGGTTCAAGACGGCCACGGAGACCAACTCCC
TGCGCTTTGAAGGACACAGCTTGCGGGTGTTTGATATAAAAGTAAGAAGG
ACATCTTGAGGGAGGGAGGCAGAGAGGGCGTGGAGGGAGGGGGAGGGAAG
GCCTTAACATCACCACATGCGTCCCCACTTTCCACCGCCTCCTACAAGCA
TGCCATCAAAAGGACGGTGCTAAGCCAGACCTGACGCATTGGTTATCTTT
CCATTCGTTATCTTACCCACCCCTCTCTCCCTTCCATCCCACCCCAACCC
TCTCTCCCCCCTCCCTCCAGTCGGCCATCGTCGCAGAGAAGCGGCTGGAC
AAAGGCCTAGATTTCGATTTAGAGCTTTCTAACCCACAGACTAAGGAAGG
TAGGTGCCGTTTAAAGGAGGGACGGATGGATGGATGGATGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAAAGAAGCTGACCTTGGGTGACGCCCC
CTGGGTGCAGAAGGGCTGCTAGCAAGACACTTACCCTCGCCCCCTTCCTC
TCTCCCTCCCTCCTCCCCTCCCTAGTATATCTTGACGAAACCAAGTCCAT
CGACAAGAACAGCACCGTGCTAGTAAAGCGTGTGGCGGCTCCCCGGGGGT
CAGTGGGGCTGCTGGCGCGGCTGAAGGCTAACACGCCGCTGACACCGCAA
AACATGTACGTATGGAGGTGGAGGACGAGAAGGGAGGGAGGGAGGGGAGG
AGGGTAGAGTAGGTGTAGTAAGTAATAGAGAGGCTTAAATATTTTAGAGA
AGATGAATGATGAATGTGTGACTGTTAGATAAGGAGGAGGAGGAGGAGGA
GGAGGAGGGGAGGAGGAAGAGAATGGTGGAATGGATACGCGAGGAGATAC
AAAAAGCAACAAGATGCCTTGTGGAGGGTGCTTCTGAGGAGGAGGACGAG
GGGAAAAAGTGATAGTGGTGATGATGGAAAGCTTCATACCTTCTTCCTCT
TCATCTTCTTCATCTCCATATCGCTTCCTTTGTCGTCGTCGGCTTCTTCA
GCTTTATTTTGGTGTTTGTCGTGCCCCCAGAGTGTTGTGGTCTTTTCTGC
TTAACGCTCTTGCTGCTGTTGTTGTAACTGTGGGCAGGGAGAGAGGGGGA
GACGGGACGAGGAGGGGAGCACCCGGGGAGACAACCGAGAAAGAATCTGT
CACGAAGAAGGACCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAAATCACGCCATAGCTCGAAGAGCGAGGGAGAGTGAGAGGG
AGAGTGAGAGGGGGAGGGAGAGGACGAGGACGAGGACGAAGGAGATGTCC
ATAGGCCGACTCGCCAGCCCGGGTGATGCGCACGAAGAGGCGTAAGGTGT
AAGGAAGGAAGAAGAGGAGGGAGGGGACGGGAGGAGTAAATGGATGAGGA
GGGAGGAGAGGGGAGGAATGAAAAATGGCATGAAGTGAATGAATGCACGA
GACCTCCCCTCTAATACGCCAGGGGGGAGTGGCAAAGCAAAGTTGTGCGC
GGGCGACGCAGGAAAAAAGCATGTCTTTTGTGAGAGTGATATTATCAATG
AGTGAATAATGTATATATGTACAAGCATAAGCATGTATGTGTACGGATGG
GTGACTGTAATTCACTATAAAATAATTGTATACATTTACTTGTTTATGGA
TAAGGAGATAGATATATGTGTATGGATGAAAATATACATGTTTATTATGA
GTGTCGAGTTGGGTCGAATCGCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTTCCACCCTCCCTCCCTCCCGCACTGGCCATGGCCTGCTATCGG
CGGCTATACACCTTTCTACGTTTCAGAGGTTTTAGGGGGAGAAGGATGTA
ATTTATTAGAAAAAGGATTTTTGGGATTAGAAGAAGATTGAATTGTATTA
GGAAAAGGGTGTATTGTATTGGATGGTGGTTGATTGTATTAGAAAAGGTT
ATATTGGATAAGAAGAAAGATGTGATGTGTTTTGTATCAACGGCTTAGAG
GAAAGAGAGAGAAAGAGAAAAAGAGATCGAGAGAGACAGAGAATTAGGGA
GAGGAATTTAAAATTATTTAATAACAGAAAAGGGAAAAGCGAGAGTGAAG
AATGGCACCCGAAAGATAAGATGGCATCACGCACGCTCACACATATACAC
CCATCCTCTCAGCCACACATGCACAAACCCGCCCTCTACTATCACTTCAT
CTCTCCCTCTCTCCTCCATCTCTCTCTTCCCCTCCATCTCCCTAAACCAG
CCACCTTACACCCCTCCCTCCTTCCGTCCCTCCCTTCCTCTCTCTCTCCT
TCCCTCCCTCCCTCCCTTCCTCAGGGCCTCGGGCGGATGGATGCCGCCTC
AGACGATCGTGCTACATGGAAAGGCGCACCAGCCAGCGACACGACAAACA
CCTCTATCATCATCATCATCACCGTCATCAGAAACAGCAGGAGGAGGGAA
GGAAGGAGGGAAGGAGGGAGGGAAGAGCAGCACGCCCACTATCAGGTATG
ATTCCTATAACAGGAGGGCCACTAAGGAGGGCGGGAGGGAGGGCGGGAGA
AGTCGTTTTATTTGCTTATGCTGTCAAGTGTTGGAACTAAGCCTTGAAAT
GCGAAAAAGGAGAGGGAAGAGTAGCAGCAGTTTCAGCAGTAGCAGCAGCA
GCAACAGCAGCTGTTGTAGTCGTAGTAGCAGCAGCACCAGGAACAAAAAA
TCACATCCACAACAACGACAACACCAGCAGTGCTCCTTTCATTCCCAACA
ACAAGAACAAGAACAACGACAACAACAATGATCATATAAATATGTATCGC
AGCAGCAGCAGTGCTATCCACGCACAGGGAAGGAACGACGAAAAGAAAAA
ACATGTCAGACGAAGCCCAGACAGCTTCCTGCGTCCACTCTATCACTTAC
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCATATC
ACTCGATGGAGTCCCAATGGTCCGTCCGTCGTCCTCCACCCTGCTGGCAA
ATTCATGTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCTTTCCAC
ACACGCCCTCAAATCCAATAGCACGACAAATTCCCCCACCCCGGCGGTCA
AAGTCGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGGGAAGGCATCCAA
CTGCCGACTCCGTCCATCTCGACCCCAGCGCCGAGGTACAGTGGAGGGGG
AGGGAGGGAGGGAGGGAGGGAGGGAGGGTAGGAGGAAAGCTTGTTGCACA
CTCTCGCTCTGGCCCCCTAAGCCTTCTCCTCCAATTACTGTGAATCCCAT
TCGTAGCCCCCCTCCCTCCCCCTCTCCCCCCCTCCCTCCTTCTGATCCAC
TCACATTCTTAGCCGCCCGCCCTCCCTCCTCCCCTCCCTTTCCCCCTCCC
CCCTCCCTCAGCACCGGCGCCGACGAGCTGGCAGCTTTGGATGCCGCTGT
ACAAGAGGCCGAGTCGTACGGGTAGGTGGAGGGAGGGAGGAAGGGAGGGA
GGGAGGAAGAGGGGGAGGGAGAGGGTCGAAAGCTGGGCCTGTTGGTAGGT
GATGAAGAGAGGAAAGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGAGGCA
AGGAGAGCGCAGAAGGTGGCGTCTGTGTCATGCTTCACTCTCACTCCATC
GAATCGCCCGCCCGCCGTCCCTCCTTCCCTCCCTCCCTCCCCCCCTCCCT
CCCTCCCTCCCTCCCTCTAGGGCTGGCCATGGGAACATGCGCACGAGCAA
CAAGCTCTTCCCGGGCGGTCGCGGCGGGCGAGGGGGAGCAGGACGTGGTG
GTATGTATGTCTTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCC
TCAGTTCACCCGCTCTCCTCATGGTTTATTTGACGTTTTTCCGGCCCCCC
TCGTCCTCTCCTTTTTCACTCTCACGATCCTCCTCCCTCCCCCCTCCCTC
CCTCCCTCCTTTCCCCCTTCCCTCCCTTCCTCCCTCCCCCTTCCTCAGGC
GGCGGGCCTCGATCCCTCGGCCTCCGTCCTGGCACTGTTTGCCACAAATG
CGGAAAAGAGGGTCATCTCGTCCGCTTCTGTCCTATGCTGAATAATCCCG
ACTTCCGGAAGGATCCTGTCAAGGTACGCCTCGCCCTCCCTCCTTCCCTC
CTTTCTACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNGGAGGGAGGGAGGGATTTTTTTTAACTACCTCATGTGCTCC
TGTCACCTCTCAGAGGCTTTGGCTTTCATCCCCTCCCTCCCTTCTTTCCT
TCCTCTTTCCGTCCTTCCTTATTCCTCCCTTCCTGTCACCTCCTCTCCCT
GATATCAATGTCTCCTTGACCCTCTTCCTCCCCTCCCTCCCTCATAAGGT
GGAGGTAAAGCGGTACTGCGGCCGCGTGAATGAGTCCTACAGGCTGGGGG
TCAAAAAGGCCGTCGCGTACGGAGTCTTCACCGGCGGTGAGGAGGGAGGG
AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGATTCTCGTACACGCTT
TCTCTTGCCCATTTTTTGGGCTCTTCCTCGGCATGGTGTATACATATATA
CATCAATATATATACACCAAATATATATCTACACATATGGTGTATATATA
CACGGTGAGAGGGCGTTAAGACTAGGTCGTCCTCTCGTGTGGTCCGAAGC
CATTATTCCTATATGTATACATGTATACACCAAATATTTATAAATATATG
TATATATATATGGGAATATAGTTTTTCCTGACTTGTGTCCAACTTTATCT
AATACAATGCAGGCATCGGGGCTTTGGCCTACCTGGCCATGCTCATAGTC
CTTTGGTACGGGGGTCGCCTCGTCATCGATGGTGAGAGGGAGGGAAGGAG
GCAGGGAGGGGGGGAAGGAGGAACGCTCTACAGATCTATAAATGTATGTT
CCATCCACCACCCATCCACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTGCAGGTGATCTCTCCCCTGGCACTCTGACCTCCTTCCTCCTCTACA
CCATCTATATCGCCACGGGCCTCTCCGTGCTCTCTGGCCTCGTCTCCGAG
TAGGTTCTTGCCCTCCCTCCCTCCCTCCCTTCCTCCCTTGCTTCCCTCCC
TCGCATTCCTCCCTTCCGTCCTGCTGCTCGTCTCTCCTTCTCTTTTCTTC
CCTGTCCTCCCTTTCTCCTTCTCTTCCTCTTCCCTCCTAAAAGTGCAACC
CATGGACACTCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTTC
CTCCAGGTGGATGCAGGCCATCGGGGCTTCCGAGAGAATGTTCGACCTCC
TTGACCGCGTGCCTGCCATCCCCCTGCACAGGGAGGGAGGGAGGGAGGGA
AGGAGGGAGGGCGGGGCCCAGGCAAAGGCAGAGAGTGCGGTGGAGGGAGG
GGGATATGGGGGAAAGGGTGAGAAGGAGGATAAGAAGCAGGTGGTGGAGG
AGAAGCAGATGGAAGGGAAGGTAGGTCTCGTGTGCGTGTGTGATGGTGTT
TGTCGCTGAAGATCTTCCCCTCTCCCTCTTCCTCTCCCTCCTCCCCCCCC
TTTTTCCTGCAGTTGGCTCGGTGCGGTGGTTGGTGCTGGTCATGGCTCGT
CACCCTCTCTCCCTTTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTCC
CTGCCTCGCCCAGGTTTTCTTTGACAGCGTCAATTTCGCTTACCCCTCGC
GACCCGATGTGCCGGTGCTCCAAAATTTCTCTCTTCACGTAGAGCCCAAC
GCCACAGTGGCCTTGGTTGGTGCCAGGTAGGGCGAGAGGGAGGGAGGGAT
GGAGGGACTCACGATGGTACGGCGCGCGAAACACATATGCTGACATTTTC
TATTATATTAATTTATTGATAATTATTATTATTATTATTATTATTATTAT
TATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTA
TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT
ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTAT
TATTATTATTATTATTATTATTATTACTATTACTATTATTTCTATTATTA
TTATTATTATTATTATTTATTTATTATTATTTATTTCTTTTCATCATTTT
TGTCACTTCTCTCATGATCTTTTCTACTCGTACAGTGGCAGCGGCAAGTC
CACCGTCCTCTCCCTCCTTCAGCGCTTCTACGACCCGTCCGCCGGCCAGG
TCATGATAGACGGCAAAGACATGAAAGAGGTACATCCTCCCTCTCTCCCG
CATTCCCTCCTTCTCCACTCTTCCTGTTCTCTCACATCCTTCCTCCATCG
CACTCCCATCCTCCCTTTCCCTTCCCCTCCTTCTCGCTCACACCTTCCCT
ACTCTCTCACACCCTCCCTCCCTCCCTCCGTCAGTACGACCTGACGTGGC
TTCGGCGCCACTGTGCGGTCGTCTCCCAAGAGCCCGTCTTGTTCGCCTGC
TCTCTGGTGCGGAGGGAGGGAGAGGTGGACGAAGGAAGGGAAGGAGGGAG
GAAAAGAAGAGGTCAAAGCAGAGGCTGTATGGACTTTCATCCCCACTACC
TCATCCACCCCTTGCCTCCCCCTCTCCCTCCCCTCATCCCCCTCCCACCA
GAAGGACAACATTTCCTATGGCCTGCTTGCGGCCCAGGAGGACCCCTTCT
TCTCCACCTCGTCCTCCTCCCCGCCCTCCCTCCCTTCCTCCCTCCCTGCC
ATGGCTGACATCGAGGCTGTGGCCCGGCAGGCCAATTGCCACGATTTCAT
CTCAGGCTTCCCCGAGGTACCGTCGCTGTCCTCATTCCTTCCCTCTCTCC
CTCCCTCCCTCCACTGTTCTGAAGCACGCGTTCCTTGTATGAACTTCGCA
TCTTTCCTTTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTC
CCCTCTCCCTCCTTCCTTTCTCTTTCTCTTTCTCTTTCCTTGGCTGTGCT
TGCTCCTTCCTCTCCCGCGTCCTCCAACTCACTTTCTTTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTAGGGCTACGACACACTGGTGGGAGAACGC
GGCGTGCGACTCAGTGGTGGCCAGGTGGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAGGGAGGGAGGGGAGGAACAGGGTGGCTGTGTATCTCATCCC
ACGACCCCCTGCTGCCTGTCTGTCAACGCCTGTTGCCACCTCATTCATTC
ATTCCCTTCATTTGTATTCATACATATACATATATATATATATATATATA
TATAAATATACCCCAATCTGTCTATCTGTCCGTCCCTCACCCCCTCCTGC
CGGCCTTCACAATCCTAAATCAATTTCCTCCCACGCAGAAACAAAGTCCG
TCTCTCCCCAATCAACTCCCCAATTAATTTCCTAATCAATTTCCTAAATT
TTCTAATCATTTCCCAAACAACTCCCTAATCAACTCCCTAATCAATTCTT
TTTCCACAGAAACAAAGGGTCGCGATTGCCAGGGCCCTGCTCGTCAATCC
CAAGGTACACAAGTGAAGCGTGACGCAGCCCACCCTCCCTTCCTCCCTCC
CTTCATTTTGACAACTATGAGTCATCAAAGCTCAACGAAACCCCTCCCTC
CCTTCCTCCATCCTTTTCTCCCTTGGATTCTGACGCCTATTTCTTTCGTC
CCTTCTCACCTTTCCTCCCTCCTTCAGATTCTAATGCTGGATGAAGCCAC
GTCTTCCCTCGACGCCGAGAGCGAGCATAAAGTCCAAGAGGCCTGTGACA
GGCTCATGGTAGGGAGGGAGGGAGGGAGGGAGGGGGGGGGAGGGGGGTTG
TTGAGTTTTGATGACTCATATTTATCAAGATGAAGGGAGGGAGGGAGGGA
GGGAGGGAGTGAAGGAGGACGAGGTGTACAAGCCCTTCTATTCCTTCTAT
CTTTCTCTTTCCCTCTCGCGCTCTCTCGCTCTCCCTCTTTCGCATACACG
CGCACACACACAAATAAACCTACGACCAACACACTCATTTGAAGTACTAC
AAATGCACTCACGCACCATCTCCCTCCAGGTGGGTCGCACCGTGATTGTC
ATCGCGCACCGCCTCTCGACCGTCCGAAATGCGGCCAAGATCGTGGTTAT
GGGCGAGGGCGGGATCAAGGTGAGGGGCCAAGCGAGGGAGGGAAGGAGAA
AGGGAGATGCCGACTCGTCTTGTCTGTGGCCCATACGGTCCTTGTTGGCC
AGATCCTTATTTCCCAACGGCATGGGTCTGCTTACCGCCTTTCCCTCCCT
CCCTCCCTCCCTCCCTCTCCAGAATATTGGCACACACGACGAGTTGATGG
AAACGTCCGACATCTACCGCCAGCTCATTCGCCGTCAGATCGTTTCGTCG
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCGCCACCGCCGC
CACCGCCGCCGCCGCCTCCTCCTGTGACAAGGACGAGAACAGAGAAGCAG
ACGGCTTGCCACCATCATCGTCATCATAG

Coding sequence (CDS) from alignment at chr26:612306..621584+

>NO26G01810.1 ID=NO26G01810.1|Name=NO26G01810.1|organism=Nannochloropsis oceanica|type=CDS|length=2232bp|location=Sequence derived from alignment at chr26:612306..621584+ (Nannochloropsis oceanica)
ATGTCGTCTGTGCTCCATTACCGGTTCAAGACGGCCACGGAGACCAACTC
CCTGCGCTTTGAAGGACACAGCTTGCGGGTGTTTGATATAAAATCGGCCA
TCGTCGCAGAGAAGCGGCTGGACAAAGGCCTAGATTTCGATTTAGAGCTT
TCTAACCCACAGACTAAGGAAGTATATCTTGACGAAACCAAGTCCATCGA
CAAGAACAGCACCGTGCTAGTAAAGCGTGTGGCGGCTCCCCGGGGGTCAG
TGGGGCTGCTGGCGCGGCTGAAGGCTAACACGCCGCTGACACCGCAAAAC
ATGGCCTCGGGCGGATGGATGCCGCCTCAGACGATCGTGCTACATGGAAA
GGCGCACCAGCCAGCGACACGACAAACACCTCTATCATCATCATCATCAC
CGTCATCAGAAACAGCAGGAGGAGGGAAGGAAGGAGGGAAGGAGGGAGGG
AAGAGCAGCACGCCCACTATCAGCACGACAAATTCCCCCACCCCGGCGGT
CAAAGTCGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGGGAAGGCATCC
AACTGCCGACTCCGTCCATCTCGACCCCAGCGCCGAGCACCGGCGCCGAC
GAGCTGGCAGCTTTGGATGCCGCTGTACAAGAGGCCGAGTCGTACGGGGC
TGGCCATGGGAACATGCGCACGAGCAACAAGCTCTTCCCGGGCGGTCGCG
GCGGGCGAGGGGGAGCAGGACGTGGTGGCGGCGGGCCTCGATCCCTCGGC
CTCCGTCCTGGCACTGTTTGCCACAAATGCGGAAAAGAGGGTCATCTCGT
CCGCTTCTGTCCTATGCTGAATAATCCCGACTTCCGGAAGGATCCTGTCA
AGGTGGAGGTAAAGCGGTACTGCGGCCGCGTGAATGAGTCCTACAGGCTG
GGGGTCAAAAAGGCCGTCGCGTACGGAGTCTTCACCGGCGGCATCGGGGC
TTTGGCCTACCTGGCCATGCTCATAGTCCTTTGGTACGGGGGTCGCCTCG
TCATCGATGGTGATCTCTCCCCTGGCACTCTGACCTCCTTCCTCCTCTAC
ACCATCTATATCGCCACGGGCCTCTCCGTGCTCTCTGGCCTCGTCTCCGA
GTGGATGCAGGCCATCGGGGCTTCCGAGAGAATGTTCGACCTCCTTGACC
GCGTGCCTGCCATCCCCCTGCACAGGGAGGGAGGGAGGGAGGGAAGGAGG
GAGGGCGGGGCCCAGGCAAAGGCAGAGAGTGCGGTGGAGGGAGGGGGATA
TGGGGGAAAGGGTGAGAAGGAGGATAAGAAGCAGGTGGTGGAGGAGAAGC
AGATGGAAGGGAAGGTTTTCTTTGACAGCGTCAATTTCGCTTACCCCTCG
CGACCCGATGTGCCGGTGCTCCAAAATTTCTCTCTTCACGTAGAGCCCAA
CGCCACAGTGGCCTTGGTTGGTGCCAGTGGCAGCGGCAAGTCCACCGTCC
TCTCCCTCCTTCAGCGCTTCTACGACCCGTCCGCCGGCCAGGTCATGATA
GACGGCAAAGACATGAAAGAGTACGACCTGACGTGGCTTCGGCGCCACTG
TGCGGTCGTCTCCCAAGAGCCCGTCTTGTTCGCCTGCTCTCTGAAGGACA
ACATTTCCTATGGCCTGCTTGCGGCCCAGGAGGACCCCTTCTTCTCCACC
TCGTCCTCCTCCCCGCCCTCCCTCCCTTCCTCCCTCCCTGCCATGGCTGA
CATCGAGGCTGTGGCCCGGCAGGCCAATTGCCACGATTTCATCTCAGGCT
TCCCCGAGGGCTACGACACACTGGTGGGAGAACGCGGCGTGCGACTCAGT
GGTGGCCAGAAACAAAGGGTCGCGATTGCCAGGGCCCTGCTCGTCAATCC
CAAGATTCTAATGCTGGATGAAGCCACGTCTTCCCTCGACGCCGAGAGCG
AGCATAAAGTCCAAGAGGCCTGTGACAGGCTCATGGTGGGTCGCACCGTG
ATTGTCATCGCGCACCGCCTCTCGACCGTCCGAAATGCGGCCAAGATCGT
GGTTATGGGCGAGGGCGGGATCAAGAATATTGGCACACACGACGAGTTGA
TGGAAACGTCCGACATCTACCGCCAGCTCATTCGCCGTCAGATCGTTTCG
TCGTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCGCCACCGC
CGCCACCGCCGCCGCCGCCTCCTCCTGTGACAAGGACGAGAACAGAGAAG
CAGACGGCTTGCCACCATCATCGTCATCATAG

Synonyms

Publications