NO26G01710, NO26G01710 (gene) Nannochloropsis oceanica

Overview
NameNO26G01710
Unique NameNO26G01710
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3543
Alignment locationchr26:568019..571561 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:568019..571561 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO26G01710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR037ncniR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR046ngnoR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G01710.1NO26G01710.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO26G01710.2NO26G01710.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO26G01710.3NO26G01710.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO26G01710.4NO26G01710.4-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|600917gene_8008Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G01710.1NO26G01710.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO26G01710.2NO26G01710.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO26G01710.3NO26G01710.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO26G01710.4NO26G01710.4Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G01710 ID=NO26G01710|Name=NO26G01710|organism=Nannochloropsis oceanica|type=gene|length=3543bp
GCTTCACTCTTCATTTTCTACTTTGTTGGTCTCTCTCTCTTGACAATCAA
ATACTATGATACTTCCCACACACAATTTGCACATGATGGTCCCTCAGGTG
CACTATCCAGGAGCGCCAGATCAAATGGGCGAAAACATTCAGTAGCTGCA
GCAACTCGGCACGGTGGATGCGGCGGGAGAGAATGATGACGATATGATGG
TGATGCAACTTTTTCCTCCCGTCCCCGATATGCAATGTCATAAGTCACCT
TGGATAGAGGCACGTTTAGCGCGTTCACCTTGCTGGAGCCTGTGTGTGGA
TCGCTTGCATGGCGTTGAGGAAAAGTGGGCGAGCGTAGATTATGGCGAGC
GAGGAAGAAAACCAGGGCAGGAGAAGAAGCAATGAGGCCTCATTTGAGGC
GTAGACTGGCTAATTCATTTGAACAAGGGCTCACATAATGCACCCACACA
CAAACCGTCCATAGAGAACGAACGTTTAGCACCAGCGACAGTACGGGCAG
CAGCAGTACCAGCAATAGCGGCAGCAATCGCAGCACCAGCACGGCACGAC
GATGGCGGCAGCAGTAGCGACTAGgtaagcctctttttcccttcaggtca
tagcggacaagccaaactatcacctactccttctcatgcctccctttctt
cctttctcacgccctccttccttccatctctttccacccacctgcctttg
tgccccttcctgtgtgccacacagAGGCCACGAGTCCATGACTGCCCCAC
CTCTGGCGTCCTCTTTCGAATCACACAAAGACAAGGGCGGCTTCATGCGG
gtagaaaagggaggggagagtaaaagagggacgaaggcgcgttttcgcat
atctcatacaaattacattctctcctgtcccactccctcgtcctcactct
tttcctcgtccgtcattctgacataccatcgaccatcccgacaatcaacg
aaatagCGTGCCATGGTTGAAGTGGGTTTCCTGGCTCTCTGCCTGGCAGC
AGAGCTAGGCTGGTGGCATgtacgtgaggaggaaggaaggggagggaggg
atacgcattgaagggttttctgcacaatcgtatcgtcttgatgtatgtga
atgaaatgcgatcattcgacaaggtgcagtggagttatttgattttcgtt
ctacaactgacaaccctatccctcccttccgccctccctccctccctccc
tccctcccgccctccctccctctcggcagTTTCGGAGCCGTTACTCCCTC
GCTCCCGAGGGGAGTGAGAAGGAAGACGGGCTGCTCCTCGTCTCGCTGGT
GTCGAAAGTGTACGTAGGCGCACGCCTTGTCCTGTGGGTCACCGGGAAAG
gtgaggaggagggaagggagggagggaaggaaagaagcgaaagcagacgg
gcgtgtgtatgataatatcgtgattgattgaggcgtgcttatttatgtat
tatatcttttcttttgttttatttgcctcctcttataaacttttatttga
attgaccatacagGCTTTCAAACCGTGCAACGACAGCATGCCGTTACCCg
tacgttggcaggaggggagggagggagggatagaggtagcgatagacgga
cagggatgccgtaagttgcttgcttcaagcccatgttaatacttattccc
tccgcacctccctccctccctccctccttcagGCGCCCTGTCCTACCTCC
TCCTCTTCCTCGCCGGGGGCTTTGCCTTCCACGCCTTAGAGGGCGGCAAG
CTCCTGCTGGGCCTGATCAAGCAGAACCACATGCTCTTCATTCTCTACAA
gtacgttccgttcatcccctccctccctccctccctttctccctctctcc
ctcctcgtcgccttcgcctcctccaacccgtcatcctaatacctctcttc
actttctccacccctccctccctcccttcctccctccctccctccctccc
tccatccatccctagCCACTTGATCTCCGCCCCTCAACAAGCCTACTTCA
AAGGAGAAGCATTCTTCTTCCTGCGTATACTCGCAGCGTTGCTGAGCTGG
CAGgtgaggcggcacgctccttcctcccctccctccccccctccctcgag
tcccgacttgattgccactgatgccgtctgccctgaaaaacgtctttccc
tccctcacccccccctcctccttccctccctccttccctaccttccttct
cctcctttctttttggtcaccgtcctccctcatttcctttttcaatcgcc
ctccctccctccctctctccctccctcagATCCTCCTCACAGTCAGCTAC
TGGCTACTGACAACTCTCCTCCTCATCCCAGTTGCCCTCCTCTCCCTTCT
TCCTTCCTCCTCCACCGCCTCCTCCTCCGCCTCCAGCATGTCCTCCCCCC
TTCCTCCTCCTCGTCCTCGTCCTCCCCTGAAGGGACGCCGGTTAAAGgtg
cgagaggatggggagggaagaagggaaggagggagggaggaaaaggcgtg
tgccatcgtcctttactggtgtgtttgtgtgtttaggatggaacgggagg
aagggaggaagggagggagggagggaaggagagacgccccctaccgctag
cttgtagctgcacaatcgcgatgctcatttccctccctcccttcttatgc
cctcaattccatccctccatccctcccttcttatgccctctatcccttcc
ctccctccatccctccctttatccctcccttcttatgccctcatttatcc
aatccttccatccccctcttaagccctctatccctccctttatccctccc
ttcttatgccctcatttatccaatccttccatccccctcttaagtcctct
atccctccctttatccctcccttcttatgccctcattctccccatccctc
tctttatccctcccttcttccacggccactacagGACGTGGAGCGCGATT
GCCGGAAAGCAGGCGGTGAGTGATAGGGACGAAGCCGACGAGAAGGTGAA
AGAGGAGGGAGGAGAGAGAAGGGAAGGAAAGGGAAGAGGGCGAATGGAAC
GGAGAAATATGGAATTAAAATGATGTGGGGAGGGAAGGACTTGAAGGAGG
GAGGGAAGGGAGGGAAGGAGAGATGGGAGGAGGTGAAACGAGTCGACGAG
CATTAGGGGAATGAAAGGATCGAAGACATCTACGGGATGTGCCACACCCG
AAAGAGGAAAACAAAGACAAGCAAACCAACGACCGAATGGAATGTGTAAG
AAAGTAATAAGTGAGTAATGAACGTGCGCAGGATAGGAGGAGTGAAGGGA
ATGGAGGGAAGGAGGGAGGGAGGAAGACGCGCGAGAGCAGGCCGGTTTCC
CCCTCTCCCTCACTACCGTCCACATGACATACACACCAGCAAACTAAAGA
GAAAAACGGTAGGTAGGAAGTGTGTGTGTGAGAGAAAGAGAGATAGAGAG
GGAGGAAAAGAAAGAAAGACGAGAGGTACAACAAACAAAAGATGAAAAAA
CCATTCACACTAGTTAGTTTTATCGGAAGGAACGAAGCGAGGG
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protein sequence of NO26G01710.1

>NO26G01710.1-protein ID=NO26G01710.1-protein|Name=NO26G01710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=244bp
MAAAVATRGHESMTAPPLASSFESHKDKGGFMRRAMVEVGFLALCLAAEL
GWWHFRSRYSLAPEGSEKEDGLLLVSLVSKVYVGARLVLWVTGKGFQTVQ
RQHAVTRALSYLLLFLAGGFAFHALEGGKLLLGLIKQNHMLFILYNHLIS
APQQAYFKGEAFFFLRILAALLSWQILLTVSYWLLTTLLLIPVALLSLLP
SSSTASSSASSMSSPLPPPRPRPPLKGRRLKDVERDCRKAGGE*
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protein sequence of NO26G01710.2

>NO26G01710.2-protein ID=NO26G01710.2-protein|Name=NO26G01710.2|organism=Nannochloropsis oceanica|type=polypeptide|length=209bp
MVEVGFLALCLAAELGWWHFRSRYSLAPEGSEKEDGLLLVSLVSKVYVGA
RLVLWVTGKGFQTVQRQHAVTRALSYLLLFLAGGFAFHALEGGKLLLGLI
KQNHMLFILYNHLISAPQQAYFKGEAFFFLRILAALLSWQILLTVSYWLL
TTLLLIPVALLSLLPSSSTASSSASSMSSPLPPPRPRPPLKGRRLKDVER
DCRKAGGE*
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protein sequence of NO26G01710.3

>NO26G01710.3-protein ID=NO26G01710.3-protein|Name=NO26G01710.3|organism=Nannochloropsis oceanica|type=polypeptide|length=282bp
MAAAVATRGHESMTAPPLASSFESHKDKGGFMRRAMVEVGFLALCLAAEL
GWWHFRSRYSLAPEGSEKEDGLLLVSLVSKVYVGARLVLWVTGKGFQTVQ
RQHAVTRALSYLLLFLAGGFAFHALEGGKLLLGLIKQNHMLFILYNHLIS
APQQAYFKGEAFFFLRILAALLSWQILLTVSYWLLTTLLLIPVALLSLLP
SSSTASSSASSMSSPLPPPRPRPPLKGRRLKVREDGEGRREGGREEKACA
IVLYWCVCVFRMEREEGRKGGREGRRDAPYR*
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protein sequence of NO26G01710.4

>NO26G01710.4-protein ID=NO26G01710.4-protein|Name=NO26G01710.4|organism=Nannochloropsis oceanica|type=polypeptide|length=247bp
MVEVGFLALCLAAELGWWHFRSRYSLAPEGSEKEDGLLLVSLVSKVYVGA
RLVLWVTGKGFQTVQRQHAVTRALSYLLLFLAGGFAFHALEGGKLLLGLI
KQNHMLFILYNHLISAPQQAYFKGEAFFFLRILAALLSWQILLTVSYWLL
TTLLLIPVALLSLLPSSSTASSSASSMSSPLPPPRPRPPLKGRRLKVRED
GEGRREGGREEKACAIVLYWCVCVFRMEREEGRKGGREGRRDAPYR*
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Synonyms
Publications