NO26G01710.1, NO26G01710.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO26G01710.1
Unique NameNO26G01710.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1853
Alignment locationchr26:568019..571561 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:568019..571561 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO26G01710.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO26G01710NO26G01710Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO26G01710.1NO26G01710.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO26G01710.1.cds1NO26G01710.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO26G01710.1.cds2NO26G01710.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO26G01710.1.cds3NO26G01710.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO26G01710.1.cds4NO26G01710.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO26G01710.1.cds5NO26G01710.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO26G01710.1.cds6NO26G01710.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO26G01710.1.cds7NO26G01710.1.cds7Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO26G01710.1.cds8NO26G01710.1.cds8Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO26G01710.1.cds9NO26G01710.1.cds9Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO26G01710.1 ID=NO26G01710.1|Name=NO26G01710.1|organism=Nannochloropsis oceanica|type=mRNA|length=1853bp
GCTTCACTCTTCATTTTCTACTTTGTTGGTCTCTCTCTCTTGACAATCAA
ATACTATGATACTTCCCACACACAATTTGCACATGATGGTCCCTCAGGTG
CACTATCCAGGAGCGCCAGATCAAATGGGCGAAAACATTCAGTAGCTGCA
GCAACTCGGCACGGTGGATGCGGCGGGAGAGAATGATGACGATATGATGG
TGATGCAACTTTTTCCTCCCGTCCCCGATATGCAATGTCATAAGTCACCT
TGGATAGAGGCACGTTTAGCGCGTTCACCTTGCTGGAGCCTGTGTGTGGA
TCGCTTGCATGGCGTTGAGGAAAAGTGGGCGAGCGTAGATTATGGCGAGC
GAGGAAGAAAACCAGGGCAGGAGAAGAAGCAATGAGGCCTCATTTGAGGC
GTAGACTGGCTAATTCATTTGAACAAGGGCTCACATAATGCACCCACACA
CAAACCGTCCATAGAGAACGAACGTTTAGCACCAGCGACAGTACGGGCAG
CAGCAGTACCAGCAATAGCGGCAGCAATCGCAGCACCAGCACGGCACGAC
GATGGCGGCAGCAGTAGCGACTAGAGGCCACGAGTCCATGACTGCCCCAC
CTCTGGCGTCCTCTTTCGAATCACACAAAGACAAGGGCGGCTTCATGCGG
CGTGCCATGGTTGAAGTGGGTTTCCTGGCTCTCTGCCTGGCAGCAGAGCT
AGGCTGGTGGCATTTTCGGAGCCGTTACTCCCTCGCTCCCGAGGGGAGTG
AGAAGGAAGACGGGCTGCTCCTCGTCTCGCTGGTGTCGAAAGTGTACGTA
GGCGCACGCCTTGTCCTGTGGGTCACCGGGAAAGGCTTTCAAACCGTGCA
ACGACAGCATGCCGTTACCCGCGCCCTGTCCTACCTCCTCCTCTTCCTCG
CCGGGGGCTTTGCCTTCCACGCCTTAGAGGGCGGCAAGCTCCTGCTGGGC
CTGATCAAGCAGAACCACATGCTCTTCATTCTCTACAACCACTTGATCTC
CGCCCCTCAACAAGCCTACTTCAAAGGAGAAGCATTCTTCTTCCTGCGTA
TACTCGCAGCGTTGCTGAGCTGGCAGATCCTCCTCACAGTCAGCTACTGG
CTACTGACAACTCTCCTCCTCATCCCAGTTGCCCTCCTCTCCCTTCTTCC
TTCCTCCTCCACCGCCTCCTCCTCCGCCTCCAGCATGTCCTCCCCCCTTC
CTCCTCCTCGTCCTCGTCCTCCCCTGAAGGGACGCCGGTTAAAGGACGTG
GAGCGCGATTGCCGGAAAGCAGGCGGTGAGTGATAGGGACGAAGCCGACG
AGAAGGTGAAAGAGGAGGGAGGAGAGAGAAGGGAAGGAAAGGGAAGAGGG
CGAATGGAACGGAGAAATATGGAATTAAAATGATGTGGGGAGGGAAGGAC
TTGAAGGAGGGAGGGAAGGGAGGGAAGGAGAGATGGGAGGAGGTGAAACG
AGTCGACGAGCATTAGGGGAATGAAAGGATCGAAGACATCTACGGGATGT
GCCACACCCGAAAGAGGAAAACAAAGACAAGCAAACCAACGACCGAATGG
AATGTGTAAGAAAGTAATAAGTGAGTAATGAACGTGCGCAGGATAGGAGG
AGTGAAGGGAATGGAGGGAAGGAGGGAGGGAGGAAGACGCGCGAGAGCAG
GCCGGTTTCCCCCTCTCCCTCACTACCGTCCACATGACATACACACCAGC
AAACTAAAGAGAAAAACGGTAGGTAGGAAGTGTGTGTGTGAGAGAAAGAG
AGATAGAGAGGGAGGAAAAGAAAGAAAGACGAGAGGTACAACAAACAAAA
GATGAAAAAACCATTCACACTAGTTAGTTTTATCGGAAGGAACGAAGCGA
GGG
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protein sequence of NO26G01710.1

>NO26G01710.1-protein ID=NO26G01710.1-protein|Name=NO26G01710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=244bp
MAAAVATRGHESMTAPPLASSFESHKDKGGFMRRAMVEVGFLALCLAAEL
GWWHFRSRYSLAPEGSEKEDGLLLVSLVSKVYVGARLVLWVTGKGFQTVQ
RQHAVTRALSYLLLFLAGGFAFHALEGGKLLLGLIKQNHMLFILYNHLIS
APQQAYFKGEAFFFLRILAALLSWQILLTVSYWLLTTLLLIPVALLSLLP
SSSTASSSASSMSSPLPPPRPRPPLKGRRLKDVERDCRKAGGE*
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mRNA from alignment at chr26:568019..571561+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO26G01710.1 ID=NO26G01710.1|Name=NO26G01710.1|organism=Nannochloropsis oceanica|type=mRNA|length=3543bp|location=Sequence derived from alignment at chr26:568019..571561+ (Nannochloropsis oceanica)
GCTTCACTCTTCATTTTCTACTTTGTTGGTCTCTCTCTCTTGACAATCAA
ATACTATGATACTTCCCACACACAATTTGCACATGATGGTCCCTCAGGTG
CACTATCCAGGAGCGCCAGATCAAATGGGCGAAAACATTCAGTAGCTGCA
GCAACTCGGCACGGTGGATGCGGCGGGAGAGAATGATGACGATATGATGG
TGATGCAACTTTTTCCTCCCGTCCCCGATATGCAATGTCATAAGTCACCT
TGGATAGAGGCACGTTTAGCGCGTTCACCTTGCTGGAGCCTGTGTGTGGA
TCGCTTGCATGGCGTTGAGGAAAAGTGGGCGAGCGTAGATTATGGCGAGC
GAGGAAGAAAACCAGGGCAGGAGAAGAAGCAATGAGGCCTCATTTGAGGC
GTAGACTGGCTAATTCATTTGAACAAGGGCTCACATAATGCACCCACACA
CAAACCGTCCATAGAGAACGAACGTTTAGCACCAGCGACAGTACGGGCAG
CAGCAGTACCAGCAATAGCGGCAGCAATCGCAGCACCAGCACGGCACGAC
GATGGCGGCAGCAGTAGCGACTAGGTAAGCCTCTTTTTCCCTTCAGGTCA
TAGCGGACAAGCCAAACTATCACCTACTCCTTCTCATGCCTCCCTTTCTT
CCTTTCTCACGCCCTCCTTCCTTCCATCTCTTTCCACCCACCTGCCTTTG
TGCCCCTTCCTGTGTGCCACACAGAGGCCACGAGTCCATGACTGCCCCAC
CTCTGGCGTCCTCTTTCGAATCACACAAAGACAAGGGCGGCTTCATGCGG
GTAGAAAAGGGAGGGGAGAGTAAAAGAGGGACGAAGGCGCGTTTTCGCAT
ATCTCATACAAATTACATTCTCTCCTGTCCCACTCCCTCGTCCTCACTCT
TTTCCTCGTCCGTCATTCTGACATACCATCGACCATCCCGACAATCAACG
AAATAGCGTGCCATGGTTGAAGTGGGTTTCCTGGCTCTCTGCCTGGCAGC
AGAGCTAGGCTGGTGGCATGTACGTGAGGAGGAAGGAAGGGGAGGGAGGG
ATACGCATTGAAGGGTTTTCTGCACAATCGTATCGTCTTGATGTATGTGA
ATGAAATGCGATCATTCGACAAGGTGCAGTGGAGTTATTTGATTTTCGTT
CTACAACTGACAACCCTATCCCTCCCTTCCGCCCTCCCTCCCTCCCTCCC
TCCCTCCCGCCCTCCCTCCCTCTCGGCAGTTTCGGAGCCGTTACTCCCTC
GCTCCCGAGGGGAGTGAGAAGGAAGACGGGCTGCTCCTCGTCTCGCTGGT
GTCGAAAGTGTACGTAGGCGCACGCCTTGTCCTGTGGGTCACCGGGAAAG
GTGAGGAGGAGGGAAGGGAGGGAGGGAAGGAAAGAAGCGAAAGCAGACGG
GCGTGTGTATGATAATATCGTGATTGATTGAGGCGTGCTTATTTATGTAT
TATATCTTTTCTTTTGTTTTATTTGCCTCCTCTTATAAACTTTTATTTGA
ATTGACCATACAGGCTTTCAAACCGTGCAACGACAGCATGCCGTTACCCG
TACGTTGGCAGGAGGGGAGGGAGGGAGGGATAGAGGTAGCGATAGACGGA
CAGGGATGCCGTAAGTTGCTTGCTTCAAGCCCATGTTAATACTTATTCCC
TCCGCACCTCCCTCCCTCCCTCCCTCCTTCAGGCGCCCTGTCCTACCTCC
TCCTCTTCCTCGCCGGGGGCTTTGCCTTCCACGCCTTAGAGGGCGGCAAG
CTCCTGCTGGGCCTGATCAAGCAGAACCACATGCTCTTCATTCTCTACAA
GTACGTTCCGTTCATCCCCTCCCTCCCTCCCTCCCTTTCTCCCTCTCTCC
CTCCTCGTCGCCTTCGCCTCCTCCAACCCGTCATCCTAATACCTCTCTTC
ACTTTCTCCACCCCTCCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCC
TCCATCCATCCCTAGCCACTTGATCTCCGCCCCTCAACAAGCCTACTTCA
AAGGAGAAGCATTCTTCTTCCTGCGTATACTCGCAGCGTTGCTGAGCTGG
CAGGTGAGGCGGCACGCTCCTTCCTCCCCTCCCTCCCCCCCTCCCTCGAG
TCCCGACTTGATTGCCACTGATGCCGTCTGCCCTGAAAAACGTCTTTCCC
TCCCTCACCCCCCCCTCCTCCTTCCCTCCCTCCTTCCCTACCTTCCTTCT
CCTCCTTTCTTTTTGGTCACCGTCCTCCCTCATTTCCTTTTTCAATCGCC
CTCCCTCCCTCCCTCTCTCCCTCCCTCAGATCCTCCTCACAGTCAGCTAC
TGGCTACTGACAACTCTCCTCCTCATCCCAGTTGCCCTCCTCTCCCTTCT
TCCTTCCTCCTCCACCGCCTCCTCCTCCGCCTCCAGCATGTCCTCCCCCC
TTCCTCCTCCTCGTCCTCGTCCTCCCCTGAAGGGACGCCGGTTAAAGGTG
CGAGAGGATGGGGAGGGAAGAAGGGAAGGAGGGAGGGAGGAAAAGGCGTG
TGCCATCGTCCTTTACTGGTGTGTTTGTGTGTTTAGGATGGAACGGGAGG
AAGGGAGGAAGGGAGGGAGGGAGGGAAGGAGAGACGCCCCCTACCGCTAG
CTTGTAGCTGCACAATCGCGATGCTCATTTCCCTCCCTCCCTTCTTATGC
CCTCAATTCCATCCCTCCATCCCTCCCTTCTTATGCCCTCTATCCCTTCC
CTCCCTCCATCCCTCCCTTTATCCCTCCCTTCTTATGCCCTCATTTATCC
AATCCTTCCATCCCCCTCTTAAGCCCTCTATCCCTCCCTTTATCCCTCCC
TTCTTATGCCCTCATTTATCCAATCCTTCCATCCCCCTCTTAAGTCCTCT
ATCCCTCCCTTTATCCCTCCCTTCTTATGCCCTCATTCTCCCCATCCCTC
TCTTTATCCCTCCCTTCTTCCACGGCCACTACAGGACGTGGAGCGCGATT
GCCGGAAAGCAGGCGGTGAGTGATAGGGACGAAGCCGACGAGAAGGTGAA
AGAGGAGGGAGGAGAGAGAAGGGAAGGAAAGGGAAGAGGGCGAATGGAAC
GGAGAAATATGGAATTAAAATGATGTGGGGAGGGAAGGACTTGAAGGAGG
GAGGGAAGGGAGGGAAGGAGAGATGGGAGGAGGTGAAACGAGTCGACGAG
CATTAGGGGAATGAAAGGATCGAAGACATCTACGGGATGTGCCACACCCG
AAAGAGGAAAACAAAGACAAGCAAACCAACGACCGAATGGAATGTGTAAG
AAAGTAATAAGTGAGTAATGAACGTGCGCAGGATAGGAGGAGTGAAGGGA
ATGGAGGGAAGGAGGGAGGGAGGAAGACGCGCGAGAGCAGGCCGGTTTCC
CCCTCTCCCTCACTACCGTCCACATGACATACACACCAGCAAACTAAAGA
GAAAAACGGTAGGTAGGAAGTGTGTGTGTGAGAGAAAGAGAGATAGAGAG
GGAGGAAAAGAAAGAAAGACGAGAGGTACAACAAACAAAAGATGAAAAAA
CCATTCACACTAGTTAGTTTTATCGGAAGGAACGAAGCGAGGG
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Coding sequence (CDS) from alignment at chr26:568019..571561+

>NO26G01710.1 ID=NO26G01710.1|Name=NO26G01710.1|organism=Nannochloropsis oceanica|type=CDS|length=732bp|location=Sequence derived from alignment at chr26:568019..571561+ (Nannochloropsis oceanica)
ATGGCGGCAGCAGTAGCGACTAGAGGCCACGAGTCCATGACTGCCCCACC
TCTGGCGTCCTCTTTCGAATCACACAAAGACAAGGGCGGCTTCATGCGGC
GTGCCATGGTTGAAGTGGGTTTCCTGGCTCTCTGCCTGGCAGCAGAGCTA
GGCTGGTGGCATTTTCGGAGCCGTTACTCCCTCGCTCCCGAGGGGAGTGA
GAAGGAAGACGGGCTGCTCCTCGTCTCGCTGGTGTCGAAAGTGTACGTAG
GCGCACGCCTTGTCCTGTGGGTCACCGGGAAAGGCTTTCAAACCGTGCAA
CGACAGCATGCCGTTACCCGCGCCCTGTCCTACCTCCTCCTCTTCCTCGC
CGGGGGCTTTGCCTTCCACGCCTTAGAGGGCGGCAAGCTCCTGCTGGGCC
TGATCAAGCAGAACCACATGCTCTTCATTCTCTACAACCACTTGATCTCC
GCCCCTCAACAAGCCTACTTCAAAGGAGAAGCATTCTTCTTCCTGCGTAT
ACTCGCAGCGTTGCTGAGCTGGCAGATCCTCCTCACAGTCAGCTACTGGC
TACTGACAACTCTCCTCCTCATCCCAGTTGCCCTCCTCTCCCTTCTTCCT
TCCTCCTCCACCGCCTCCTCCTCCGCCTCCAGCATGTCCTCCCCCCTTCC
TCCTCCTCGTCCTCGTCCTCCCCTGAAGGGACGCCGGTTAAAGGACGTGG
AGCGCGATTGCCGGAAAGCAGGCGGTGAGTGA
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Synonyms
Publications