NO26G01220, NO26G01220 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G01220 vs. NCBI_GenBank
Match: OWZ21099.1 (putative mitochondrial protein [Phytophthora megakarya]) HSP 1 Score: 65.1 bits (157), Expect = 2.300e-7 Identity = 44/136 (32.35%), Postives = 74/136 (54.41%), Query Frame = 0 Query: 20 VYRRLLGMAKNLPQDKQASALEQIRQGFREHAGETDAQRVSKLLEQASSTLGYLKMVTPKRRIGATANASSGDGGEGRATGGRTYLVYKDGEGRVTEEAARRDKLAYSNWDGSNMDPDNVRRHQHQLSRMGFRNNR 156 +Y++LL +A++LP+ K+ ++LEQIR+ FR H TD + VS ++++A S+LGYLK+VTP+ TG R Y +Y++G+ RV + W +M+ ++RH L R F + + Sbjct: 7 LYKKLLRLAQSLPEPKRQTSLEQIRREFRGHKDVTDPREVSAMIQRAQSSLGYLKIVTPRSESN---------------TGVRRY-IYRNGQ-RVDAAEFEVKGEENARWKTQDMEA-GLKRHHQLLRRQHFMDRK 124
BLAST of NO26G01220 vs. NCBI_GenBank
Match: XP_012898637.1 (uncharacterized protein [Blastocystis hominis] >CBK24589.2 unnamed protein product [Blastocystis hominis]) HSP 1 Score: 63.2 bits (152), Expect = 8.800e-7 Identity = 30/61 (49.18%), Postives = 44/61 (72.13%), Query Frame = 0 Query: 20 VYRRLLGMAKNLPQDKQASALEQIRQGFREHAGETDAQRVSKLLEQASSTLGYLKMVTPKR 81 +Y+ L+ A+ LP+ K+ AL++IR FREHAGETDA ++ ++ A S L +LKMVTP+R Sbjct: 7 LYKELIRTARLLPEAKRIPALQEIRTKFREHAGETDAAKIEEMKHDAESRLKFLKMVTPRR 67
BLAST of NO26G01220 vs. NCBI_GenBank
Match: XP_008605554.1 (hypothetical protein SDRG_01782 [Saprolegnia diclina VS20] >EQC40710.1 hypothetical protein SDRG_01782 [Saprolegnia diclina VS20]) HSP 1 Score: 63.2 bits (152), Expect = 8.800e-7 Identity = 42/130 (32.31%), Postives = 70/130 (53.85%), Query Frame = 0 Query: 21 YRRLLGMAKNLPQDKQASALEQIRQGFREHAGETDAQRVSKLLEQASSTLGYLKMVTPKRRIGATANASSGDGGEGRATGGRTYLVYKDGEGRVTEEAARRDKLAYSNWDGSNMDPDNVR--RHQHQLSR 149 Y++LL +AK++PQ+++A LE++R FR H G + + +LL +A S + YLK+VTPK+ ++SS G ++ VYK+G+ R+ D D + M +V+ R QH + R Sbjct: 9 YKKLLKLAKSVPQEQRAQTLEKVRHEFRAHEGAATPEELDQLLRKAQSKISYLKIVTPKK------SSSSTQG---------SHFVYKNGQ-RIDGRELSADSATIKTHDYNAMMTKHVQLVRRQHFMDR 122
BLAST of NO26G01220 vs. NCBI_GenBank
Match: XP_024585037.1 (Complex 1 LYR protein [Plasmopara halstedii] >CEG48668.1 Complex 1 LYR protein [Plasmopara halstedii]) HSP 1 Score: 63.2 bits (152), Expect = 8.800e-7 Identity = 41/133 (30.83%), Postives = 72/133 (54.14%), Query Frame = 0 Query: 12 ASSTNALR-VYRRLLGMAKNLPQDKQASALEQIRQGFREHAGETDAQRVSKLLEQASSTLGYLKMVTPKRRIGATANASSGDGGEGRATGGRTYLVYKDGEGRVTEEAARRDKLAYSNWDGSNMDPDNVRRHQ 144 +++T LR +Y++LL +A+NLPQ K+ S+++QIR+ FR H TD + VS+ +++A S+L YLK++TP+ + G +Y++G+ RV + + W +M+ R HQ Sbjct: 2 SNATRELRPLYKKLLRLAQNLPQSKRQSSIDQIRREFRCHEDLTDPKEVSEFIQRAQSSLSYLKIITPRT----------------ESNTGVQRFIYRNGQ-RVNAADFEKKGNENARWKTQDMEAGYKRHHQ 117 The following BLAST results are available for this feature:
BLAST of NO26G01220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 14
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G01220 ID=NO26G01220|Name=NO26G01220|organism=Nannochloropsis oceanica|type=gene|length=1015bpback to top protein sequence of NO26G01220.1 >NO26G01220.1-protein ID=NO26G01220.1-protein|Name=NO26G01220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=163bpback to top Synonyms
Publications
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