NO26G01220, NO26G01220 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G01220 vs. NCBI_GenBank
Match: EWM23165.1 (hypothetical protein Naga_100043g17 [Nannochloropsis gaditana]) HSP 1 Score: 125.6 bits (314), Expect = 1.500e-25 Identity = 63/100 (63.00%), Postives = 75/100 (75.00%), Query Frame = 0 Query: 63 LEQASSTLGYLKMVTPKRRIGATANASSGDGGEGRATGGRTYLVYKDGEGRVTEEAARRDKLAYSNWDGSNMDPDNVRRHQHQLSRMGFRNNRHAKGGIF 163 +EQASS+LGYL+M+TPKR + + D G + GRTY+VYKDG G V+ E R+K AYSNWDGS+MDPD VRRHQHQL RMGFR+N HAKGGIF Sbjct: 1 MEQASSSLGYLRMITPKR--WKSLHTGDSDAMGGAKSAGRTYIVYKDGGGSVSREPLPREKSAYSNWDGSSMDPDAVRRHQHQLRRMGFRDNTHAKGGIF 98
BLAST of NO26G01220 vs. NCBI_GenBank
Match: GAX99351.1 (Hypothetical protein PINS_007196 [Pythium insidiosum]) HSP 1 Score: 72.4 bits (176), Expect = 1.500e-9 Identity = 53/152 (34.87%), Postives = 78/152 (51.32%), Query Frame = 0 Query: 1 MATPSSAAAVAASSTNALRVYRRLLGMAKNLPQD-KQASALEQIRQGFREHAGETDAQRVSKLLEQASSTLGYLKMVTPKRRIGATANASSGDGGEGRATGGRTYLVYKDGEGRVTEEAARRDKLAYSNWDGSNMDPDNVRRHQHQLSRMGF 152 M TPSSA A +Y++LL +AK++P D K+ S ++QIR FR H +D + +S LL++A S +G+LK+VTP+ R+ GRT +VY GE RV ++ + Y D + N+RRH L R F Sbjct: 1 MTTPSSAVA------ELRPIYKKLLRLAKSIPDDAKRESTVQQIRSEFRSHLDSSDPKEISALLQRAQSKIGFLKIVTPR----------------ARSDSGRTNIVYMKGE-RVDGDSVSEEGARYKTADFES----NLRRHNQLLRRQHF 125
BLAST of NO26G01220 vs. NCBI_GenBank
Match: CCA17542.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 69.7 bits (169), Expect = 9.500e-9 Identity = 47/132 (35.61%), Postives = 72/132 (54.55%), Query Frame = 0 Query: 20 VYRRLLGMAKNLPQDKQASALEQIRQGFREHAGETDAQRVSKLLEQASSTLGYLKMVTPKRRIGATANASSGDGGEGRATGGRTYLVYKDGEGRVTEEAARRDKLAYSNWDGSNMDPDNVRRHQHQLSRMGF 152 +Y+RL+ +AK+LP +KQA+ L IR FR+H +D ++S+LLE+A ST+GYLK+VTP +R D G R ++KDGE R+ E ++ + D + ++RH L R F Sbjct: 7 IYKRLIRLAKSLPAEKQAATLLNIRTEFRKHRDISDPTQLSQLLERAQSTIGYLKIVTPHKR---------SDSGVKR-------FMFKDGE-RIEENLKASERARFKVQDIG----EGLKRHHQLLRRQHF 117
BLAST of NO26G01220 vs. NCBI_GenBank
Match: GAX99350.1 (Hypothetical protein PINS_007195 [Pythium insidiosum]) HSP 1 Score: 69.3 bits (168), Expect = 1.200e-8 Identity = 52/152 (34.21%), Postives = 77/152 (50.66%), Query Frame = 0 Query: 1 MATPSSAAAVAASSTNALRVYRRLLGMAKNLPQ-DKQASALEQIRQGFREHAGETDAQRVSKLLEQASSTLGYLKMVTPKRRIGATANASSGDGGEGRATGGRTYLVYKDGEGRVTEEAARRDKLAYSNWDGSNMDPDNVRRHQHQLSRMGF 152 M TPSSA A +Y++LL +AK++P K+ S ++QIR FR H +D + +S LL++A S +G+LK+VTP+ R+ GRT +VY GE RV ++ + Y D + N+RRH L R F Sbjct: 1 MTTPSSAVA------ELRPIYKKLLRLAKSIPDVAKRESTVQQIRSEFRSHLDSSDPKEISALLQRAQSKIGFLKIVTPR----------------ARSDSGRTNIVYMKGE-RVDGDSVSEEGARYKTADFES----NLRRHNQLLRRQHF 125
BLAST of NO26G01220 vs. NCBI_GenBank
Match: XP_002896379.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY67614.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 68.2 bits (165), Expect = 2.800e-8 Identity = 45/136 (33.09%), Postives = 77/136 (56.62%), Query Frame = 0 Query: 20 VYRRLLGMAKNLPQDKQASALEQIRQGFREHAGETDAQRVSKLLEQASSTLGYLKMVTPKRRIGATANASSGDGGEGRATGGRTYLVYKDGEGRVTEEAARRDKLAYSNWDGSNMDPDNVRRHQHQLSRMGFRNNR 156 +Y++LL +A++LP+ K+ S+++QIR+ FR H TD + VS L+++A S+L YLK+VTP+ A +N TG + Y +Y++G+ RV + + W +M+ ++RH L R F N + Sbjct: 7 LYKKLLRLAQSLPEPKRQSSIDQIRRDFRSHGDPTDPKEVSALIQRAQSSLSYLKIVTPR----AESN-----------TGVQRY-IYRNGQ-RVNAAEFEEKGVENARWKMQDME-GGLKRHHQLLQRQYFMNRK 124
BLAST of NO26G01220 vs. NCBI_GenBank
Match: OEU12649.1 (hypothetical protein FRACYDRAFT_270420 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 68.2 bits (165), Expect = 2.800e-8 Identity = 57/175 (32.57%), Postives = 77/175 (44.00%), Query Frame = 0 Query: 11 AASSTNALRVYRRLLGMAKNLPQD--KQASALEQIRQGFREHAGETDAQRVSKLLEQASSTLGYLKMVTPK-------------------RRIGATANASSGDGGEGRATGGRTYLVYKDGEGRV----TEEAARRDK-LAYSNWDGSNMDPDNVRRHQHQLSRMGFRNNRHAKG 160 A S+ + YR + + K LP++ Q S QIR FRE G TD + +++A L +LKM+TPK VYK+GE R+ + R K SNWDG N+DPD+V++H HQL RMG+ NN HAKG Sbjct: 4 AIKSSVVRQKYRSMCRLIKRLPEESNNQDSYWSQIRTSFREPLGTTDT-ALEDRIKKADDRLSFLKMITPKLDHNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWVYKNGE-RIEISGSSSTVRDSKGRVISNWDGKNLDPDSVKQHNHQLKRMGYLNNSHAKG 176
BLAST of NO26G01220 vs. NCBI_GenBank
Match: XP_002675227.1 (predicted protein [Naegleria gruberi] >EFC42483.1 predicted protein [Naegleria gruberi]) HSP 1 Score: 67.4 bits (163), Expect = 4.700e-8 Identity = 40/124 (32.26%), Postives = 63/124 (50.81%), Query Frame = 0 Query: 34 DKQASALEQIRQGFREHAGETDAQRVSKLLEQASSTLGYLKMVTPKRRIGATANASSGDGGEGRATGGRTYLVYKDGEGR------VTEEAARRDKLAYSNWDGSNMDPDNVRRHQHQLSRMGF 152 +K+ +A+ +IR FR+ ET+ + + + L++A GYL M+TPKR T+ G+T LV DGE + + + +K +SNW N+DPD VR+H+ L R F Sbjct: 12 EKRVNAINEIRSTFRKFKNETNQEIIQQQLKKAHDKFGYLCMITPKRLHTETSQID-----------GKTQLVKIDGEWKDVNAIGEDDNLTKEEKATWSNWGRGNLDPDQVRKHEQLLKRQHF 124
BLAST of NO26G01220 vs. NCBI_GenBank
Match: CCI44820.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 67.0 bits (162), Expect = 6.100e-8 Identity = 43/133 (32.33%), Postives = 71/133 (53.38%), Query Frame = 0 Query: 19 RVYRRLLGMAKNLPQDKQASALEQIRQGFREHAGETDAQRVSKLLEQASSTLGYLKMVTPKRRIGATANASSGDGGEGRATGGRTYLVYKDGEGRVTEEAARRDKLAYSNWDGSNMDPDNVRRHQHQLSRMGF 152 R++++++ +AK+LP +KQA L IR FR+H D ++++LLE+A ST+GYLK+VTP + R+ G + VYKDGE R+ + +K + D + ++RH + R F Sbjct: 9 RIFKKMVKLAKSLPVEKQAGTLLNIRAEFRKHRDIRDPIQLAQLLERAQSTIGYLKIVTPHK----------------RSDSGVKHFVYKDGE-RIEKSLQAGEKAKFKVQDME----EGLKRHNQLIRRQYF 120
BLAST of NO26G01220 vs. NCBI_GenBank
Match: GBG33600.1 (Hypothetical Protein FCC1311_098232 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 67.0 bits (162), Expect = 6.100e-8 Identity = 47/148 (31.76%), Postives = 77/148 (52.03%), Query Frame = 0 Query: 8 AAVAASSTNALRVYRRLLGMAKNLPQDKQASALEQIRQGFREHAGETDAQRVSKLLEQASSTLGYLKMVTPKRRIGATANASSGDGGEGRATGGRTYLVYKDGEGRVTEEAARRDKLAYSNWDGSNMDPDNVRRHQHQLSRMGFRNNR 156 A A AL +Y++LL A+ LP+ ++A+A +++R F+ HA E ++V +LL A S LGYLK+VTP+ AT G+ LV +DG+ V A D+ + D +++D D + +H + + R F + R Sbjct: 4 AGAGAGRRVALALYKQLLQTARRLPEAQRAAAAQEVRDKFKAHAAEGSPEKVQELLNLAQSKLGYLKIVTPRTSRDAT---------------GKARLVLRDGKW-VEGSARLMDRAPH---DKTSVDADALAKHNYLMERQHFMHRR 132
BLAST of NO26G01220 vs. NCBI_GenBank
Match: XP_008913013.1 (hypothetical protein PPTG_17126 [Phytophthora parasitica INRA-310] >ETI35288.1 hypothetical protein F443_18349 [Phytophthora parasitica P1569] >ETK75546.1 hypothetical protein L915_17856 [Phytophthora parasitica] >ETL28963.1 hypothetical protein L916_17756 [Phytophthora parasitica] >ETL82214.1 hypothetical protein L917_17585 [Phytophthora parasitica] >ETM35410.1 hypothetical protein L914_17668 [Phytophthora parasitica] >ETN01698.1 hypothetical protein PPTG_17126 [Phytophthora parasitica INRA-310] >ETO64029.1 hypothetical protein F444_18368 [Phytophthora parasitica P1976] >ETP05098.1 hypothetical protein F441_18225 [Phytophthora parasitica CJ01A1] >ETP33257.1 hypothetical protein F442_18177 [Phytophthora parasitica P10297] >KUG01019.1 hypothetical protein AM587_10015970 [Phytophthora nicotianae]) HSP 1 Score: 65.1 bits (157), Expect = 2.300e-7 Identity = 42/136 (30.88%), Postives = 72/136 (52.94%), Query Frame = 0 Query: 20 VYRRLLGMAKNLPQDKQASALEQIRQGFREHAGETDAQRVSKLLEQASSTLGYLKMVTPKRRIGATANASSGDGGEGRATGGRTYLVYKDGEGRVTEEAARRDKLAYSNWDGSNMDPDNVRRHQHQLSRMGFRNNR 156 +Y++LL +A++LP+ K+ S+++QIR+ FR H TD Q VS L+++A S+L YLK+VTP+ + G +Y++G+ RV + + W +M+ +RRH L R F + + Sbjct: 11 LYKKLLRLAQSLPEPKRQSSIDQIRRDFRNHGDLTDPQEVSALIQRAQSSLSYLKIVTPR----------------AESNMGVQRYIYRNGQ-RVNADEFEEKGEENARWKTQDME-GGLRRHHQLLRRQYFLDRK 128 The following BLAST results are available for this feature:
BLAST of NO26G01220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 14
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G01220 ID=NO26G01220|Name=NO26G01220|organism=Nannochloropsis oceanica|type=gene|length=1015bpback to top protein sequence of NO26G01220.1 >NO26G01220.1-protein ID=NO26G01220.1-protein|Name=NO26G01220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=163bpback to top Synonyms
Publications
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