NO26G01050, NO26G01050 (gene) Nannochloropsis oceanica

Overview
NameNO26G01050
Unique NameNO26G01050
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5441
Alignment locationchr26:346739..352179 -

Link to JBrowse

Properties
Property NameValue
DescriptionWinged helix-turn-helix transcription repressor
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:346739..352179 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036390WH_DNA-bd_sf
IPR006630Lupus_La_RNA-bd
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Homology
[Close]
BLAST of NO26G01050 vs. NCBI_GenBank
Match: EWM23147.1 (Winged helix-turn-helix transcription repressor [Nannochloropsis gaditana])

HSP 1 Score: 187.6 bits (475), Expect = 3.200e-43
Identity = 161/537 (29.98%), Postives = 258/537 (48.04%), Query Frame = 0 
Query:   90 MASPRHPTPAALLLLLFGASLAHVSRPTVQEGMSSEGRCDRVTDDGGNGAVVAHPSALSSRRHNIGEHDNAAFDNMVSHYNEARMLLDV----SDAIDPAALEQALDLLESNLHQWRGVEEQLRRAGLHDNGILLMTHTQIIHRQALSLAERQQKQQGDNHQADVRGRDEGQSPLILRAVEDVETFCPEFYTLQTAGPFAPLHTIPPTKPSLSQQSGPSSAEAA--VALNSLP----ETLTFSSYSHSSALDHGTAAV---SYYPCYVALADLYAEVQ-QQQQQPQHEAGRGGDLLARYVTAKRREEADLPAQNIPMGYGVWELQQQEAAAFRMRAMAMVDKIALLSASPPHALATAWRDDDSS-SSNFVAWNEAQIMRAFLLDLVWQLTSSPKVADAQSYLEKAKVWLRVVEQRALQRV---VHAKTRESKGREEGG--------KEGDVIAEATKMVDEILAEGRGYLALIDEVSRQGWAALDSEMRRSSSNRSRDKVNKEGTGMSESRSRGKVFLAVMKVREHALAASRRPLHE 601
            MA+ + P   A L+LL+ AS A        E + S        + GGNG       + S      G   +AA+    + Y++A  LL++     + ++  A+ +AL+LLE N+ +W  +EE L    LHD+  +LM    +I  Q L++A R ++Q+G+   A +  R  G+ P ++RA+E+ E  CP  + +Q                 L   +G S  E +   AL S P       +F      S L  G+       Y+ CY  LADLY+E+Q  QQQ  +   G+G DL+ARY+  +R+EE     +    G    +L +Q     R R   MVD++ALLS S P  +A +  D DS      + WNEAQ+MRA +LD+VWQL++  +  +AQ+ +E+AK+WL ++ QR+  R+   +H +     G ++G         +E    A AT + + +  EG  YL  +  V+ +GW AL+ E              ++   +   +S  ++  AV +  +HAL A R  L +
Sbjct:    8 MANYQIPISLACLILLWRASAAKARHAGGNEKVES------YRNAGGNGVEAPPAPSTSPMGLQPGVDSDAAYRVRKARYDKAHDLLELYLQQENMLEADAIREALELLEGNMSEWGALEETLGHGYLHDDDFMLMIRAHVIRGQMLAVAARYERQEGE--LAKLSSRGSGRDPPMVRALEEFEYACPMLWKVQ-----------------LVSAAGSSRGENSNLTALGSDPFFFSAMPSFWGPPPGSGLAGGSLGAPEDDYHSCYAVLADLYSELQLHQQQHERQRKGKGADLMARYMVVRRQEE---DREKSDAGGEAQQLNKQ-GLKLRRRTWGMVDRLALLSTSCPADVAASGSDSDSPYPKTQIIWNEAQVMRAHMLDIVWQLSAVTEPWNAQACVERAKIWLGMIRQRSQARMAYYLHHRQAAGGGADKGQGPRLGGKVREMQAAAAATVVSEGLQEEGNCYLGALTAVAEKGWEALEVERGEEGRLCGLPGGRRKDVVLPGFQSGEEILEAVREAYQHALLAPRLSLRD 515
[Close]
BLAST of NO26G01050 vs. NCBI_GenBank
Match: XP_005856092.1 (la ribonucleoprotein domain member 1, partial [Nannochloropsis gaditana CCMP526] >EKU20267.1 la ribonucleoprotein domain member 1, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 126.3 bits (316), Expect = 8.700e-25
Identity = 75/174 (43.10%), Postives = 97/174 (55.75%), Query Frame = 0 
Query: 1483 NHSHGHPRRQCLPDL---PS-VPPSTVVSAPHMPSPPVHTHSTMGQEQIEEVLRHQLHFYFSPENLANDFYLRGKMDSEGWVPFAEVAQFKRVKHLLGLLGMGGGVERGKEGRHKAAVTDLSLLIKIAADSDEVEVRMVMQGDDGRREGKEXXXGKGSFMYKIRPRHEPLQWVL 1653
            +H HGH   +  P     PS  P +   S+P +          + ++++E+ LR QLH+YFSPENL  D+YLR KMD +GWV  AEVAQF R KHLLGLLG  G      E     A  D SLL+ I A+S +VEV+ +M  +    +G       G  +YKIRPR  P QWVL
Sbjct:  501 SHRHGHADMRNYPPAYHQPSPYPVANYESSPQIEPSATRPAQAVDRKEVEDKLRRQLHYYFSPENLKRDYYLRSKMDGQGWVMLAEVAQFNRTKHLLGLLGFQG------EKEVNGAPLDFSLLLSIVAESPKVEVQ-IMPTEKASGDG-----NGGRLVYKIRPRENPKQWVL 662
[Close]
BLAST of NO26G01050 vs. NCBI_GenBank
Match: KHN80274.1 (La-related protein 1 [Toxocara canis])

HSP 1 Score: 70.1 bits (170), Expect = 7.400e-8
Identity = 51/167 (30.54%), Postives = 75/167 (44.91%), Query Frame = 0 
Query: 1495 PDLPSV----PPSTVVSAPHMPSPPVHTHSTMGQEQIEEVLRHQLHFYFSPENLANDFYLRGKMDSEGWVPFAEVAQFKRVKHLLGLLGMGGGVERGKEGRHKAAVTDLSLLIKIAADSDEVEVRMVMQGDDGRREGKEXXXGKGSFMYKIRPRHEPLQWVL-PATE 1657
            PDL S+     P+ +   P    PP      +  + +++ +R Q+ +YFS +NL  DF+LR KMD +G++P + +A F RV+ L                       DL L+      S++VE+      DDGR               KIRPR  P QW L PAT+
Sbjct:  399 PDLTSIGGPPGPAGLAGTPFAIYPPTAAFLPVNDDTLKDYVRKQIEYYFSSDNLQKDFFLRRKMDKDGFLPLSLIAGFPRVRSL---------------------TQDLELIADGLRASEKVEI-----SDDGR---------------KIRPRSNPQQWPLSPATQ 524
[Close]
BLAST of NO26G01050 vs. NCBI_GenBank
Match: XP_008193405.1 (PREDICTED: la-related protein 1 [Tribolium castaneum] >EFA11442.2 hypothetical protein TcasGA2_TC013624 [Tribolium castaneum])

HSP 1 Score: 69.3 bits (168), Expect = 1.300e-7
Identity = 38/136 (27.94%), Postives = 65/136 (47.79%), Query Frame = 0 
Query: 1517 HTHSTMGQEQIEEVLRHQLHFYFSPENLANDFYLRGKMDSEGWVPFAEVAQFKRVKHLLGLLGMGGGVERGKEGRHKAAVTDLSLLIKIAADSDEVEVRMVMQGDDGRREGKEXXXGKGSFMYKIRPRHEPLQWVL 1653
            +++  + +  ++E +R+Q+ +YFS ENL+ DF+LR KMD +G++P   +A F RV                     +A   +L L+I   + SD++E                      S  +K+RP+HEP +W L
Sbjct:  389 NSYGNLDKPTLKEYIRNQIEYYFSEENLSRDFFLRRKMDPQGYLPITLIASFHRV---------------------QALTDNLPLIIDAVSSSDKIEF---------------------SSGFKVRPKHEPTKWPL 482
[Close]
BLAST of NO26G01050 vs. NCBI_GenBank
Match: KEY67479.1 (hypothetical protein S7711_02399 [Stachybotrys chartarum IBT 7711])

HSP 1 Score: 69.3 bits (168), Expect = 1.300e-7
Identity = 52/155 (33.55%), Postives = 73/155 (47.10%), Query Frame = 0 
Query: 1499 SVPPSTVVSAPHMPSPPVHTHSTMGQEQIEEVLRHQLHFYFSPENLANDFYLRGKMDSEGWVPFAEVAQFKRVKHLLGLLGMGGGVERGKEGRHKAAVTDLSLLIKIAADSDEVEVRMVMQGDDGRREGKEXXXGKGSFMYKIRPRHEPLQWVLP 1654
            S+PP + +  P+ P+PPV          +   LR Q+ +YFS ENL  D YLR +MDS+G+VP   VA FKR++ L G                     DLSL+  +  DS  VE   ++ GDD               + ++RPR    +WVLP
Sbjct:  553 SMPPMSAM--PYQPAPPV-------DNVLLPYLRSQVEYYFSIENLCKDLYLRRRMDSQGFVPLHFVAAFKRMRQLTG---------------------DLSLIRLVCEDSAVVE---LVVGDDD--------------VERLRPRENFDRWVLP 660
[Close]
BLAST of NO26G01050 vs. NCBI_GenBank
Match: KFA47666.1 (hypothetical protein S40293_07705 [Stachybotrys chartarum IBT 40293])

HSP 1 Score: 69.3 bits (168), Expect = 1.300e-7
Identity = 52/155 (33.55%), Postives = 73/155 (47.10%), Query Frame = 0 
Query: 1499 SVPPSTVVSAPHMPSPPVHTHSTMGQEQIEEVLRHQLHFYFSPENLANDFYLRGKMDSEGWVPFAEVAQFKRVKHLLGLLGMGGGVERGKEGRHKAAVTDLSLLIKIAADSDEVEVRMVMQGDDGRREGKEXXXGKGSFMYKIRPRHEPLQWVLP 1654
            S+PP + +  P+ P+PPV          +   LR Q+ +YFS ENL  D YLR +MDS+G+VP   VA FKR++ L G                     DLSL+  +  DS  VE   ++ GDD               + ++RPR    +WVLP
Sbjct:  553 SMPPMSAM--PYQPAPPV-------DNVLLPYLRSQVEYYFSIENLCKDLYLRRRMDSQGFVPLHFVAAFKRMRQLTG---------------------DLSLIRLVCEDSAVVE---LVVGDDD--------------VERLRPRENFDRWVLP 660
[Close]
BLAST of NO26G01050 vs. NCBI_GenBank
Match: KFA75415.1 (hypothetical protein S40288_06815 [Stachybotrys chartarum IBT 40288])

HSP 1 Score: 69.3 bits (168), Expect = 1.300e-7
Identity = 52/155 (33.55%), Postives = 73/155 (47.10%), Query Frame = 0 
Query: 1499 SVPPSTVVSAPHMPSPPVHTHSTMGQEQIEEVLRHQLHFYFSPENLANDFYLRGKMDSEGWVPFAEVAQFKRVKHLLGLLGMGGGVERGKEGRHKAAVTDLSLLIKIAADSDEVEVRMVMQGDDGRREGKEXXXGKGSFMYKIRPRHEPLQWVLP 1654
            S+PP + +  P+ P+PPV          +   LR Q+ +YFS ENL  D YLR +MDS+G+VP   VA FKR++ L G                     DLSL+  +  DS  VE   ++ GDD               + ++RPR    +WVLP
Sbjct:  553 SMPPMSAM--PYQPAPPV-------DNVLLPYLRSQVEYYFSIENLCKDLYLRRRMDSQGFVPLHFVAAFKRMRQLTG---------------------DLSLIRLVCEDSAVVE---LVVGDDD--------------VERLRPRENFDRWVLP 660
[Close]
BLAST of NO26G01050 vs. NCBI_GenBank
Match: XP_018396221.1 (PREDICTED: la-related protein 1 [Cyphomyrmex costatus] >KYN02062.1 La-related protein [Cyphomyrmex costatus])

HSP 1 Score: 68.9 bits (167), Expect = 1.600e-7
Identity = 39/126 (30.95%), Postives = 64/126 (50.79%), Query Frame = 0 
Query: 1527 IEEVLRHQLHFYFSPENLANDFYLRGKMDSEGWVPFAEVAQFKRVKHLLGLLGMGGGVERGKEGRHKAAVTDLSLLIKIAADSDEVEVRMVMQGDDGRREGKEXXXGKGSFMYKIRPRHEPLQWVL 1653
            ++E +R Q+ +YFS ENL  DF+LR KM+ +G++P   +A F+RV++L                       D+ L+I+   +SD +E   +++ +DG               YKIR R +PL+W L
Sbjct:  561 LKEYIRKQIEYYFSEENLVKDFFLRRKMNVQGYLPLTLIASFQRVQNL---------------------TVDIDLVIEAVLESDRLE---LLESEDG---------------YKIRTRFDPLKWPL 647
[Close]
BLAST of NO26G01050 vs. NCBI_GenBank
Match: EGI64880.1 (La-related protein [Acromyrmex echinatior])

HSP 1 Score: 68.6 bits (166), Expect = 2.100e-7
Identity = 39/126 (30.95%), Postives = 65/126 (51.59%), Query Frame = 0 
Query: 1527 IEEVLRHQLHFYFSPENLANDFYLRGKMDSEGWVPFAEVAQFKRVKHLLGLLGMGGGVERGKEGRHKAAVTDLSLLIKIAADSDEVEVRMVMQGDDGRREGKEXXXGKGSFMYKIRPRHEPLQWVL 1653
            ++E +R Q+ +YFS ENL  DF+LR KM+++G++P   +A F+RV++L                       D+ L+I+   +SD +E   +++ +DG               YKIR R +PL+W L
Sbjct:  384 LKEYIRKQIEYYFSEENLVKDFFLRRKMNAQGYLPLTLIASFQRVQNL---------------------TVDIDLVIEAVLESDRLE---LLELEDG---------------YKIRTRFDPLKWPL 470
[Close]
BLAST of NO26G01050 vs. NCBI_GenBank
Match: KFA61312.1 (hypothetical protein S40285_05985 [Stachybotrys chlorohalonata IBT 40285])

HSP 1 Score: 68.6 bits (166), Expect = 2.100e-7
Identity = 52/155 (33.55%), Postives = 73/155 (47.10%), Query Frame = 0 
Query: 1499 SVPPSTVVSAPHMPSPPVHTHSTMGQEQIEEVLRHQLHFYFSPENLANDFYLRGKMDSEGWVPFAEVAQFKRVKHLLGLLGMGGGVERGKEGRHKAAVTDLSLLIKIAADSDEVEVRMVMQGDDGRREGKEXXXGKGSFMYKIRPRHEPLQWVLP 1654
            S+PP + +S  + P+PPV          +   LR Q+ +YFS ENL  D YLR +MDS+G+VP   VA FKR++ L G                     DLSL+  +  DS  VE   ++ GDD               + ++RPR    +WVLP
Sbjct:  553 SMPPMSAMS--YQPAPPV-------DNVLLPYLRSQVEYYFSIENLCKDLYLRRRMDSQGFVPLHFVAAFKRMRQLTG---------------------DLSLIRLVCEDSAVVE---LVVGDDD--------------VERLRPRENFDRWVLP 660
The following BLAST results are available for this feature:
BLAST of NO26G01050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23147.13.200e-4329.98Winged helix-turn-helix transcription repressor [N... [more]
XP_005856092.18.700e-2543.10la ribonucleoprotein domain member 1, partial [Nan... [more]
KHN80274.17.400e-830.54La-related protein 1 [Toxocara canis][more]
XP_008193405.11.300e-727.94PREDICTED: la-related protein 1 [Tribolium castane... [more]
KEY67479.11.300e-733.55hypothetical protein S7711_02399 [Stachybotrys cha... [more]
KFA47666.11.300e-733.55hypothetical protein S40293_07705 [Stachybotrys ch... [more]
KFA75415.11.300e-733.55hypothetical protein S40288_06815 [Stachybotrys ch... [more]
XP_018396221.11.600e-730.95PREDICTED: la-related protein 1 [Cyphomyrmex costa... [more]
EGI64880.12.100e-730.95La-related protein [Acromyrmex echinatior][more]
KFA61312.12.100e-733.55hypothetical protein S40285_05985 [Stachybotrys ch... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL050nonsL050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL049nonsL049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR037ncniR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR046ngnoR046Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005963NSK005963Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G01050.1NO26G01050.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|600553gene_7930Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100043g38gene7306Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G01050.1NO26G01050.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G01050 ID=NO26G01050|Name=NO26G01050|organism=Nannochloropsis oceanica|type=gene|length=5441bp
ATGGAGACAGTGAAAGGAGAGATCGGGAATGTAAAGCAACAGCTACCTGA
GTCCCAAGAGATCATGGTGGCCTTCATCTCGGAAAAGATCACCCGCGAGC
GGCACTCGGCGCTGGACGAGATTCATGGGTCTGACATTCCAGCACCGAGG
CAGCgtaaggaagcaaagaggggcggcgacgggtcgaggaggccaaagga
ggagggggaaatgatagagagaaagaagaggatcaggaaggaaagggggt
ataggcagacggaaatgaatgttcaaggggagggtgcttttatgggtggc
ccattgagaggccatgcatacacttcctgtcgtcaaagaaagaagggaaa
ataacgtgctcgctgtaaaaagctcacgctacttccgtcctatatttgat
cactcctaaaacgtggtacactttcaattgaaaaaatggaattttccccc
tgtaaaaaagcccggcgtgaaatgtatctcgggtctaacagacatttttg
tctctctcctaggggtggtagagttaactgacacttgtgagattcatgac
catttttcctccccaaacacagcagctccagtcacacacagacgccgttg
ttgctcacacacgcaaattcgcagGTTGGCGTGCCCCCGTTGTGTTTACT
GGACAAACAAGGCTAAGCAGAACCAGCCAGGCAGCGGGTGGCTCGAAGCC
AGGGCTGGATCCCAACTTGGTCACGTACCACGCCGCCATGGCCAGCCCAC
GTCATCCCACCCCCGCCGCCCTCTTGCTACTACTGTTCGGAGCATCCTTA
GCTCATGTCAGCAGGCCGACGGTGCAAGAGGGCATGTCAAGCGAGGGTCG
GTGCGACAGAGTAACGGATGACGGGGGAAACGGAGCTGTTGTCGCTCACC
CTTCCGCCCTCTCCTCGCGCCGCCATAACATTGGCGAGCATGACAACGCC
GCTTTTGACAATATGGTGAGCCACTACAACGAGGCCCGTATGCTGCTCGA
CGTGAGTGACGCGATTGATCCGGCAGCCCTGGAGCAGGCCTTGGACCTTC
TGGAAAGTAACTTGCACCAGTGGCGAGGAGTGGAGGAACAGTTGCGGCGG
GCGGGGCTGCACGACAATGGTATTTTGTTGATGACGCATACGCAGATCAT
ACACAGACAGGCCTTGTCATTGGCTGAACGGCAGCAGAAGCAGCAAGGGG
ACAATCATCAGGCAGACGTGCGGGGCCGAGACGAGGGTCAGAGCCCCCTC
ATTCTTCGAGCTGTTGAAGATGTGGAAACTTTCTGCCCCGAGTTTTATAC
ATTGCAAACAGCAGGGCCATTCGCTCCGTTACACACTATTCCCCCCACAA
AGCCCAGTTTATCTCAGCAATCTGGTCCCTCATCGGCAGAAGCTGCGGTA
GCTCTTAACAGCCTCCCCGAGACACTCACCTTCTCCTCTTACTCGCATTC
ATCAGCCCTTGACCATGGGACCGCAGCTGTCAGTTACTACCCTTGCTACG
TAGCTCTGGCGGATCTGTACGCTGAAGTCCAACAGCAGCAGCAACAACCG
CAGCACGAGGCAGGGAGAGGGGGCGACCTGTTGGCCCGATATGTCACAGC
CAAGCGACGGGAAGAGGCCGACCTGCCAGCACAGAACATACCGATGGGCT
ACGGGGTGTGGGAATTACAGCAGCAGGAGGCTGCTGCATTCCGGATGCGG
GCGATGGCGATGGTGGACAAGATTGCTCTTTTGTCTGCTTCCCCCCCTCA
TGCGCTTGCCACTGCTTGGCGAGACGACGATAGCAGCAGCAGTAATTTTG
TAGCGTGGAATGAAGCACAGATCATGCGGGCTTTCCTTCTGGACCTGGTA
TGGCAATTGACATCATCGCCAAAAGTAGCAGACGCCCAATCCTATCTGGA
GAAGGCCAAGGTCTGGTTGCGTGTCGTTGAGCAACGGGCCCTGCAGCGCG
TGGTACACGCCAAGACAAGAGAGAGTAAAGGGAGGGAGGAAGGAGGCAAG
GAAGGGGATGTGATTGCGGAGGCCACCAAGATGGTGGATGAGATACTGGC
GGAGGGACGGGGATATCTGGCGCTGATAGACGAGGTCTCTCGGCAAGGGT
GGGCGGCGTTGGACTCGGAAATGCGTCGCTCGAGCAGCAACAGGAGTAGG
GACAAAGTGAATAAGGAAGGAACAGGCATGTCGGAGTCGCGATCCCGAGG
GAAGGTTTTTTTGGCTGTCATGAAGGTGCGGGAACATGCACTGGCTGCAT
CTCGTCGTCCTTTGCACGAAACACCCGCGGGGACCCAGAATCAGGCACTA
CCGGGCATGCACAGCCACCGCAAGTCCTCATCCTCCCCCTCCTCCTCAAC
CTCTTTCCCACCCTCCAGCCGGAGCAGCAGCAACAGTAGAGATGGGAATG
TTATGTGTTCGGGTTTTACCTCTTGTGCGGTCTTGCTCTGCTTAATTGGA
GGAGTATTCTTTTACTGGTCACGCAAACGCTCTCGAGCCCGCACCATCCG
CCACAAGAAGAGGGCAGCCTTGTTTGCGGCTGCTGCTGTTCGACGGGGTA
GTCAGCAGCAGCAGCAGCAGCAGCAGCAGAAAGGTGAGAAAGGGAAAGCG
TGTTACGAAAAGGCACGTCAAGCGGTGTTTCACTTGAGCAAGCGGTTTCA
GGCGTGGAATGTTTCCCTTCCTTCCGTCTTTTTGTCGACTTGCCAGCGTG
GGGTTCGTTTGGCCAGATGTTTCCTGGCGACAGCAGCGGCAGGAGGAGGG
AAGAGAAAGCAAGGAGCAAGTGCAGCCACAGGAGTAGCGGCGCAGGAGCA
GAAGTTGTTTTCAGGATCCTTCTGGCCTGCTCGGTCAGAGGCAGCAGCGA
AGGGAGGCAAAGCACAGACGCAGCAGCAGCAGCAGAAAAAGAAGGGAGAA
ATGGGTGGTGGGAATGGAGAAAGTTGCAGCTTGAGTCGTAGCAGGAGCAG
CAGCAGCAGCAGCAACAACAACAACAACAACAACAACAACAACAACAACA
ACAACAACAACAACAACAACAACAACAACAACAACAAGCGTCGCAAGTCG
CCCGAAAAGCGTAGCAAGCAGCAGCAGAGGCAGCAGGAGTTGGCCAAGGA
GGAGGCCAAACCCTCCGTCGTTCTTGTCCCTTCAGAATCCGTACACATCA
CAGAGGAGAGGGAGGAAGTGATGGGGGAGGTAACTGTTACGGTCATTGAG
GCTCGAGTGTCGTCCGGGGGGAATAAACAGCAGGACGAAGGGGAGACGGA
GGAGAAGGAAAGGACGGAGGGAGCGGCTATAACGCCCCTGCCCTTAGAGT
CGAAGCGATTGCAGGTAGTGGACAAGCAGAAGAAAGAAATTGTGGCTTCG
TCGTCGGCATGTGGGTTGGGTATGGGCAAAAAGGCAGATAATGAGGATGA
TACAGGAGCTTCGGCAAGTCCGCCCTCATTTTGTCCTAGGGGGCATGAGC
CAGGGAATGAGGAGGGGAGAGAAGAGGAGGAGGAGGAGGAAGAAAAGGGA
GTGAAAAAGGAAGAGCAGTGTAAAGAGAGGGCCATGACTGATGAGTTGTG
TAAGATGCGCGGCTCGCAGGAGAAGATGGAAGATGAGTCTATGCGCGAGA
GCGCATCTGACGAGATGGAGGGAGGAGTGTGTGTGCCAACGGCTGCCGAG
ATGCAACAAGAGCAACAGCAGAAGTACTACCACCTTCATGACGAGGAAAA
GTACGAGGAGGATGAGATGGACGTGTCGGCAAAGGCAGGAAGCATCCCAT
GCTCACTGGTGCGCGAGGAGGAAGAAACCAAAGCTTTCTCCTCAGTTCCT
TTCTTGTCCTCGTCCTCGTCCTCGTCTTCGTCCTCGTCCTCGTCCTCGCC
TCCATCCCCTCTGGTAACAATCACTATTCCTGCAGCGCTTCACCCTCTCG
TTGAACAGATGTTGCAGTACAGTCGCCGGCAGGAGTGTGCACAGCACCCG
CACCAGCGCCAGCACCAAGAGCAGCAGTGGTCGGTGCAGCAGTGGTCGGT
GCAGCGGGTCAAAGAGTGCAAGCCTGTGGCGTCTATACCAACCACAGCCT
ACAGCGCCATGGGGACCTCTGGCGACATCAGTGGCAACAGCAGCAATACC
AGCAATACCAGCACCAAGAAGAAGAAGGCGGAGAAGAACAAAAACAAGGC
TGCCATTGCCACTGCCAGCATCCATAAACAGCAGCAGCAGGATGTTATGA
TGAACCGCAAGGCCCACAACAGCAGCTCCAGTCGAACAACGACTCCCTCC
ATCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCACCACCACCACCACCACCACCAAGCCCTTGCGAAGCCTCCCTCAGC
CCCCCCCCGAGGCCCGTGACAAGAAGAATGAGGACCTTGACATTTCCCTC
TCCGCCTCCTCCGCCTCAATTATCGACGCCAGTGACAGCAGTGGCAGCAA
CAAGCACCCCATTACCTCGAAAGGCAGCAAGAAGGCGGGAGGAGAAGGCA
AAACTACCTCCCTACGTCGCGCCCGCTCCAGTGGCAAGGTCCAATCAATC
ACCGCGATGGTCGTCCCAGCTGACCTGCTTGATCCCGACTCCATGAATTT
CAGCCCGCGTATCCCCATCTTCCCTTCCGGCGCTGGCCTCCCCCTCGGCC
TAAACGTCAGTTCTAGCACATTTACCCCGCACCTCACCCCGCACCCCCAC
AGCCACAGCAAGGGCGGATATTTCACTTCCCCCTATGCGGTGATGCCTCT
TCCCCCCCATCTTTACCGCCACCCTGCTGGTGCTGCTGCTGTTGATGCTG
CGACCTACCATCACCAGTACCTGCAGCAGCAGCAGCAGGTGTATGCCCTC
TCCCCCTATCACCACTCCAGCCACCAAGCCCACCACCAACGCCACCCCTC
CCTCCCCTCCGTCGGAAATCACTCTCACGGGCACCCACGCAGGCAGTGTC
TCCCGGATCTTCCCTCCGTCCCTCCTTCCACTGTTGTCTCTGCACCACAC
ATGCCCTCCCCCCCTGTGCACACTCATTCGACAATGGGACAAGAGCAGAT
AGAAGAGGTGCTACGCCATCAGTTACATTTTTATTTTTCGCCCGAGAACC
TAGCGAATGACTTTTATCTGCGTGGAAAGATGGATAGTGAGGGATGGGTG
CCTTTTGCGGAGGTGGCTCAATTTAAGCGAGTAAAGCACTTATTGGGGTT
GTTGGGGATGGGAGGAGGGGTGGAGCGAGGGAAAGAGGGTCGTCACAAGG
CGGCCGTAACGGACTTGTCGTTGTTGATTAAGATTGCAGCTGATTCGGAC
GAGGTGGAAGTGCGGATGGTGATGCAGGGGGATGACGGGAGGAGAGAAGG
GAAGGAAGGGAAAGATGGGAAAGGAAGCTTTATGTACAAGATTCGGCCGA
GACACGAGCCGTTGCAATGGGTTTTGCCCGCGACGGAGTGA
back to top

protein sequence of NO26G01050.1

>NO26G01050.1-protein ID=NO26G01050.1-protein|Name=NO26G01050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1657bp
METVKGEIGNVKQQLPESQEIMVAFISEKITRERHSALDEIHGSDIPAPR
QRWRAPVVFTGQTRLSRTSQAAGGSKPGLDPNLVTYHAAMASPRHPTPAA
LLLLLFGASLAHVSRPTVQEGMSSEGRCDRVTDDGGNGAVVAHPSALSSR
RHNIGEHDNAAFDNMVSHYNEARMLLDVSDAIDPAALEQALDLLESNLHQ
WRGVEEQLRRAGLHDNGILLMTHTQIIHRQALSLAERQQKQQGDNHQADV
RGRDEGQSPLILRAVEDVETFCPEFYTLQTAGPFAPLHTIPPTKPSLSQQ
SGPSSAEAAVALNSLPETLTFSSYSHSSALDHGTAAVSYYPCYVALADLY
AEVQQQQQQPQHEAGRGGDLLARYVTAKRREEADLPAQNIPMGYGVWELQ
QQEAAAFRMRAMAMVDKIALLSASPPHALATAWRDDDSSSSNFVAWNEAQ
IMRAFLLDLVWQLTSSPKVADAQSYLEKAKVWLRVVEQRALQRVVHAKTR
ESKGREEGGKEGDVIAEATKMVDEILAEGRGYLALIDEVSRQGWAALDSE
MRRSSSNRSRDKVNKEGTGMSESRSRGKVFLAVMKVREHALAASRRPLHE
TPAGTQNQALPGMHSHRKSSSSPSSSTSFPPSSRSSSNSRDGNVMCSGFT
SCAVLLCLIGGVFFYWSRKRSRARTIRHKKRAALFAAAAVRRGSQQQQQQ
QQQKGEKGKACYEKARQAVFHLSKRFQAWNVSLPSVFLSTCQRGVRLARC
FLATAAAGGGKRKQGASAATGVAAQEQKLFSGSFWPARSEAAAKGGKAQT
QQQQQKKKGEMGGGNGESCSLSRSRSSSSSSNNNNNNNNNNNNNNNNNNN
NNNNNKRRKSPEKRSKQQQRQQELAKEEAKPSVVLVPSESVHITEEREEV
MGEVTVTVIEARVSSGGNKQQDEGETEEKERTEGAAITPLPLESKRLQVV
DKQKKEIVASSSACGLGMGKKADNEDDTGASASPPSFCPRGHEPGNEEGR
EEEEEEEEKGVKKEEQCKERAMTDELCKMRGSQEKMEDESMRESASDEME
GGVCVPTAAEMQQEQQQKYYHLHDEEKYEEDEMDVSAKAGSIPCSLVREE
EETKAFSSVPFLSSSSSSSSSSSSSSPPSPLVTITIPAALHPLVEQMLQY
SRRQECAQHPHQRQHQEQQWSVQQWSVQRVKECKPVASIPTTAYSAMGTS
GDISGNSSNTSNTSTKKKKAEKNKNKAAIATASIHKQQQQDVMMNRKAHN
SSSSRTTTPSISSSSSSSSSSSSSSSSSTTTTTTTKPLRSLPQPPPEARD
KKNEDLDISLSASSASIIDASDSSGSNKHPITSKGSKKAGGEGKTTSLRR
ARSSGKVQSITAMVVPADLLDPDSMNFSPRIPIFPSGAGLPLGLNVSSST
FTPHLTPHPHSHSKGGYFTSPYAVMPLPPHLYRHPAGAAAVDAATYHHQY
LQQQQQVYALSPYHHSSHQAHHQRHPSLPSVGNHSHGHPRRQCLPDLPSV
PPSTVVSAPHMPSPPVHTHSTMGQEQIEEVLRHQLHFYFSPENLANDFYL
RGKMDSEGWVPFAEVAQFKRVKHLLGLLGMGGGVERGKEGRHKAAVTDLS
LLIKIAADSDEVEVRMVMQGDDGRREGKEGKDGKGSFMYKIRPRHEPLQW
VLPATE*
back to top
Synonyms
Publications