Naga_100043g38, gene7306 (gene) Nannochloropsis gaditana

Overview
NameNaga_100043g38
Unique Namegene7306
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:207985..213295 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100043g38
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:207985..213295 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL046ngnoL046Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL045ngnoL045Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO26G01050NO26G01050Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna7548rna7548-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna7548rna7548Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna7548

>rna7548-protein ID=rna7548-protein|Name=rna7548|organism=Nannochloropsis gaditana|type=polypeptide|length=1491bp
MLQRSQGMANYQIPISLACLILLWRASAAKARHAGGNEKVESYRNAGGNG
VEAPPAPSTSPMGLQPGVDSDAAYRVRKARYDKAHDLLELYLQQENMLEA
DAIREALELLEGNMSEWGALEETLGHGYLHDDDFMLMIRAHVIRGQMLAV
AARYERQEGELAKLSSRGSGRDPPMVRALEEFEYACPMLWKVQLVSAAGS
SRGENSNLTALGSDPFFFSAMPSFWGPPPGSGLAGGSLGAPEDDYHSCYA
VLADLYSELQLHQQQHERQRKGKGADLMARYMVVRRQEEDREKSDAGGEA
QQLNKQGLKLRRRTWGMVDRLALLSTSCPADVAASGSDSDSPYPKTQIIW
NEAQVMRAHMLDIVWQLSAVTEPWNAQACVERAKIWLGMIRQRSQARMAY
YLHHRQAAGGGADKGQGPRLGGKVREMQAAAAATVVSEGLQEEGNCYLGA
LTAVAEKGWEALEVERGEEGRLCGLPGGRRKDVVLPGFQSGEEILEAVRE
AYQHALLAPRLSLRDFFAKRGALKSRPLGSSSAGPAPFPSSASSSSPSPT
FSSSSPPISPPHYTSLVGQQTAGEKASPFVLASLLALLCLLGGGFYHYSR
RHSLSRCGRHKKKAAVLAAAVVKRGAQRKVQAGQATGNWCADESRGACQQ
ARWTLSEHVASSLETATSLSRPFVGSLTRRASKMYSIWRVWARRRHQCTG
RSKAQPESNKAKAQMLSPTPKEHSTKKIKGEYSKSGTRDGSGSRRRRCPG
KRSELELVQKPPHYGHEKQQPAAQAFVSTPPVFPSPMSRQGIAGQEQRMV
SVTPGFVEGSVVGDAFEWVGTGGSHCPKSKASTLSRRNASSERLTGESEA
PRPDIYDTEKKQGQQPHLPTASCYQAGNKRKAGATAKLPCFPRSRAEKVE
GKKEKCETIKSTEAKSKGLEESAMSLDSADAQEGKGPESVSEGPGASRKE
EGGVSTVAVGNQQPEECRHWTQDQYQLEQEAEEGVSEKSTTVEVSPSDTT
GPKRSRLSTSNSTCSSQSPAAVSHPVIEQPLHAACNADKVIEHRAEPRKQ
KAETEERNEGVVQDVDQKSTSITPATVKSRNEKKNAKKVNPRRPDFDKKP
APEPDQLQGALESEGNLSYSTHTTASSISSSSSSQSLNSFTPTTAQARSI
QCNNVNCCMHGSLSRSTSTDSSTSTSSGNDASNRVSKVGSNGDTAGNLSM
SNDSKRLDTEKTQSIRETIPNATKYRPDVPQNNKTGSIRVIHNGPSGDKP
FHFSSKANGNGAYMDRTRGRICVPTLYPVLFHQLQRRPPPLPALHGHGIA
VSIPGKDYYHDACTLQPMPPLGRTDPYSHRHGHADMRNYPPAYHQPSPYP
VASYESSPQIEPSATRPAQAVDRKEVEDKLRRQLHYYFSPENLKRDYYLR
SKMDGQGWVMLAEVAQFNRTKHLLGLLGFQGEKEVKGAPLDFSLLLSIVA
ESPKVEVQIMPTEKASGDGNGGRLVYKIRPRENPKQWVLSS
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Synonyms
Publications