NO26G00880, NO26G00880 (gene) Nannochloropsis oceanica

Overview
NameNO26G00880
Unique NameNO26G00880
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2357
Alignment locationchr26:292633..294989 +

Link to JBrowse

Properties
Property NameValue
DescriptionShort-chain dehydrogenase reductase sdr
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:292633..294989 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347Glc/ribitol_DH
Homology
BLAST of NO26G00880 vs. NCBI_GenBank
Match: XP_005854162.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >EKU22195.1 short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >EWM23126.1 short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana])

HSP 1 Score: 453.4 bits (1165), Expect = 5.900e-124
Identity = 227/315 (72.06%), Postives = 269/315 (85.40%), Query Frame = 0
Query:    1 MKGALFIFALWGVLFALVPIVVDYATRKEFIVHSSGAIIVTGASTGIGNHAAIHLATQHPLTTIYAGIRKDKDAEAIAALNMPNLLPLKLDTTDQASMDAAVAQVLTTGIPVIGLVNNAGVSNNSPLEFLPMPKLRQLLETNVVGPTYLTQKLTPALRASQGRVVQISSVLGKVTLATRGAYSASKHAFEALSDVFRLELAN-FGVSVSIVEPAYVKTEIFGKVQQDIDGMKSAELLELYGPLYYRADQAKKKQKQIEGGDSPMVTSEAIEHAMFHRFPKTRYVVANFAGIPADVCLYLNWLMPDRLLDLVKSKM 315
            MKG +  FALWGV+FALVP  V++ TRK F VH++GAI+VTGASTGIGNHAAIHLAT +P  T+YAG+RKD DAE I AL++ NLLPL +DTTDQ+SMDAAVA + +T +P+IGL+NNAGVS NSP+EFLPM KLRQLLETNVVGPTYLTQ+L P+LRASQGRVVQISSVLGKVTLATRGAY ASKHAFEALSDV RLEL+  FGVSVS+VEPAYV+TEIFGK+QQ+I+ + S EL  LYGP +YR DQA +K+ QI  GDSP+VTS AIEHA+F  +PKTRYVVANFAG+ AD+CL++ W++PDRL D +K  M
Sbjct:    1 MKGGILAFALWGVIFALVPFAVEFLTRKSFPVHTTGAILVTGASTGIGNHAAIHLATHYPDVTVYAGVRKDVDAENIKALHLSNLLPLHIDTTDQSSMDAAVAFLHSTSLPIIGLINNAGVSTNSPIEFLPMAKLRQLLETNVVGPTYLTQQLIPSLRASQGRVVQISSVLGKVTLATRGAYCASKHAFEALSDVLRLELSGPFGVSVSVVEPAYVRTEIFGKIQQEIETLLSPELRSLYGPFFYREDQAARKKAQIAKGDSPVVTSTAIEHALFADYPKTRYVVANFAGVRADLCLFIAWMLPDRLADWLKGMM 315          
BLAST of NO26G00880 vs. NCBI_GenBank
Match: EWM25314.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana])

HSP 1 Score: 245.4 bits (625), Expect = 2.400e-61
Identity = 143/314 (45.54%), Postives = 194/314 (61.78%), Query Frame = 0
Query:   12 GVLFALVPIVVDY-----ATRKEF-IVHSSGAIIVTGASTGIGNHAAIHLATQHPLTTIYAGIRKDKDAEAIAALNMPNLLPLKLDTTDQASM----DAAVAQVLTTGIPVIGLVNNAGVSNNSPLEFLPMPKLRQLLETNVVGPTYLTQKLTPALRASQGRVVQISSVLGKVTLATRGAYSASKHAFEALSDVFRLELANFGVSVSIVEPAYVKTEIFGKVQQDIDGM--KSAELLELYGPLYYRADQAKKKQKQIEGGDSPMVTSEAIEHAMFHRFPKTRYVVANFAGIPADVCLYLNWLMPDRLLDLVKSK 314
            G+L A V  ++ Y       RK F +    GAI++TGASTGIGNHAA HLA Q  +  +Y  +RK  D EAI AL +PNL P+ +D     S+    +  +A++    IP+IGLVNNAGV+   PLEF P+  LR + + +V+GP  LTQ+L PA+RA++GR+V +SS+   V L T  AY ASK A E +SD  R EL +F  SVSIV+PAYV T IF KV Q ID     S E++  YG  ++R ++  K +  ++    P VT++AI HA+   +P TRY+VAN +GIPA    +L WL PDRL D +  K
Sbjct:   18 GLLGAFVLAIMSYHLTVFIFRKRFPVPPKGGAIVITGASTGIGNHAAQHLARQGYI--VYCTVRKPADVEAIQALGLPNLRPIIMDVAQAKSIENGAETILAELSKNNIPLIGLVNNAGVAQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIFKKVTQSIDTKVEVSPEIMTTYG-YFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPAFWLGWLVWLCPDRLADFIMGK 328          
BLAST of NO26G00880 vs. NCBI_GenBank
Match: XP_005855521.1 (1-acylglycerone phosphate reductase, partial [Nannochloropsis gaditana CCMP526] >EKU20840.1 1-acylglycerone phosphate reductase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 228.8 bits (582), Expect = 2.400e-56
Identity = 134/293 (45.73%), Postives = 183/293 (62.46%), Query Frame = 0
Query:   12 GVLFALVPIVVDY-----ATRKEF-IVHSSGAIIVTGASTGIGNHAAIHLATQHPLTTIYAGIRKDKDAEAIAALNMPNLLPLKLDTTDQASM----DAAVAQVLTTGIPVIGLVNNAGVSNNSPLEFLPMPKLRQLLETNVVGPTYLTQKLTPALRASQGRVVQISSVLGKVTLATRGAYSASKHAFEALSDVFRLELANFGVSVSIVEPAYVKTEIFGKVQQDIDGM--KSAELLELYGPLYYRADQAKKKQKQIEGGDSPMVTSEAIEHAMFHRFPKTRYVVANFAGIPA 293
            G+L A V  ++ Y       RK F +    GAI++TGASTGIGNHAA HLA Q  +  +Y  +RK  D EAI AL +PNL P+ +D     S+    +  +A++    IP+IGLVNNAGV+   PLEF P+  LR + + +V+GP  LTQ+L PA+RA++GR+V +SS+   V L T  AY ASK A E +SD  R EL +F  SVSIV+PAYV T IF KV Q ID     S E++  YG  ++R ++  K +  ++    P VT++AI HA+   +P TRY+VAN +GIPA
Sbjct:   26 GLLGAFVLAIMSYHLTVFIFRKRFPVPPKGGAIVITGASTGIGNHAAQHLARQGYI--VYCTVRKPADVEAIQALGLPNLRPIIMDVAQAKSIENGAETILAELSKNNIPLIGLVNNAGVAQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIFKKVTQSIDTKVEVSPEIMTTYG-YFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPA 315          
BLAST of NO26G00880 vs. NCBI_GenBank
Match: XP_005855590.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >EKU20782.1 short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 219.5 bits (558), Expect = 1.400e-53
Identity = 131/308 (42.53%), Postives = 189/308 (61.36%), Query Frame = 0
Query:   10 LWGVLFALVPIVVDYATRKEFIVHSSG--AIIVTGASTGIGNHAAIHLATQHPLTTIYAGIRKDKDAEAIAALNMPNLLPLKLDTTDQASMDAA----VAQVLTTGIPVIGLVNNAGVSNNSPLEFLPMPKLRQLLETNVVGPTYLTQKLTPALRASQGRVVQISSVLGKVTLATRGAYSASKHAFEALSDVFRLELANFGVSVSIVEPAYVKTEIFGKVQQDIDGMKSAE---LLELYGPLYYRADQAKKKQKQIEGGDSPMVTSEAIEHAMFHRFPKTRYVVANFAGIPADVCLYLNWLMPDRLLD 309
            L G+L +L+P++++YA+R+E+    SG  A++++GASTGIG  AA+HLA       +YAG+RK+KDAE + ++    L+P+ LD T Q S+D A     A     GIPV GLVNNAG+   S +E   +  ++++ + NV G   LTQK  P LRA  GR+VQISS+ G +T+     Y +SKHA E+LSD  RLELA++ VSV++V+P  V++ IF K  Q     K AE    L++YG +           K     D+P  T++AI  A+  R+PKTR VVAN  G+PA    Y+  ++PDR+LD
Sbjct:    6 LIGLLLSLIPLLLNYASRREYPTPPSGGAAVVLSGASTGIGYDAAVHLADDF---VVYAGVRKEKDAEMLRSVGKSTLVPVILDVTSQDSIDEAYVKITADAAERGIPVWGLVNNAGIMTASTVEHHDVAGMQKIYDVNVWGVLRLTQKFLPLLRAQAGRIVQISSIAGFLTIPRASGYCSSKHALESLSDGLRLELAHYNVSVTVVQPGAVRSAIFEK-SQSASQAKLAEDPRELKVYGHMIKEGSTDSIMAK----ADTPDCTTKAIRQALMDRYPKTREVVANIDGLPAIFAHYMKHMLPDRVLD 305          
BLAST of NO26G00880 vs. NCBI_GenBank
Match: EWM24343.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana])

HSP 1 Score: 219.5 bits (558), Expect = 1.400e-53
Identity = 132/316 (41.77%), Postives = 191/316 (60.44%), Query Frame = 0
Query:    2 KGALFIFALWGVLFALVPIVVDYATRKEFIVHSSG--AIIVTGASTGIGNHAAIHLATQHPLTTIYAGIRKDKDAEAIAALNMPNLLPLKLDTTDQASMDAA----VAQVLTTGIPVIGLVNNAGVSNNSPLEFLPMPKLRQLLETNVVGPTYLTQKLTPALRASQGRVVQISSVLGKVTLATRGAYSASKHAFEALSDVFRLELANFGVSVSIVEPAYVKTEIFGKVQQDIDGMKSAE---LLELYGPLYYRADQAKKKQKQIEGGDSPMVTSEAIEHAMFHRFPKTRYVVANFAGIPADVCLYLNWLMPDRLLD 309
            K  +    L G+L +L+P++++YA+R+E+    SG  A++++GASTGIG  AA+HLA       +YAG+RK+KDAE + ++    L+P+ LD T Q S+D A     A     GIPV GLVNNAG+   S +E   +  ++++ + NV G   LTQK  P LRA  GR+VQISS+ G +T+     Y +SKHA E+LSD  RLELA++ VSV++V+P  V++ IF K  Q     K AE    L++YG +           K     D+P  T++AI  A+  R+PKTR VVAN  G+PA    Y+  ++PDR+LD
Sbjct:   90 KATMLKIFLIGLLLSLIPLLLNYASRREYPTPPSGGAAVVLSGASTGIGYDAAVHLADDF---VVYAGVRKEKDAEMLRSVGKSTLVPVILDVTSQDSIDEAYVKITADAAERGIPVWGLVNNAGIMTASTVEHHDVAGMQKIYDVNVWGVLRLTQKFLPLLRAQAGRIVQISSIAGFLTIPRASGYCSSKHALESLSDGLRLELAHYNVSVTVVQPGAVRSAIFEK-SQSASQAKLAEDPRELKVYGHMIKEGSTDSIMAK----ADTPDCTTKAIRQALMDRYPKTREVVANIDGLPAIFAHYMKHMLPDRVLD 397          
BLAST of NO26G00880 vs. NCBI_GenBank
Match: XP_004990606.1 (oxidoreductase [Salpingoeca rosetta] >EGD77262.1 oxidoreductase [Salpingoeca rosetta])

HSP 1 Score: 216.9 bits (551), Expect = 9.300e-53
Identity = 125/303 (41.25%), Postives = 182/303 (60.07%), Query Frame = 0
Query:   10 LWGVLFALVPIVVDYATRKEFIVHSSGAIIVTGASTGIGNHAAIHLATQHPLTTIYAGIRKDKDAEAIAALNMPNLLPLKLDTTDQASMDAAVAQVLTTGIPVIGLVNNAGVSNNSPLEFLPMPKLRQLLETNVVGPTYLTQKLTPALRASQGRVVQISSVLGKVTLATRGAYSASKHAFEALSDVFRLELANFGVSVSIVEPAYVKTEIFGKVQQDIDGMK--SAELLELYGPLYYRADQAKKKQKQIEGGDSPMVTSEAIEHAMFHRFPKTRYVVANFAGIPADVCLYLNWLMPDRLLDLV 311
            L G+L  L+ ++  +   K F VH SGAI++TG STGIG HAA+ LA +    T+YA +RK  D +++    +  L+P+ +D T    + +AV  +   G  +IGLVNNAG+S   PLE   + ++R + E NV G   +TQ   P +R ++GR+V + S+ G + +    +YSA+K   E L+D  R E+A FGVSVSIVEPAYV T I  K   +    +  S E+ + Y   ++ AD  +K+ K     D P VT++AI HA+  R P+TRY+VAN  GIPA +   +NWL+PDRL D+V
Sbjct:    9 LMGILAVLLYLLFVFPV-KYFPVHDSGAILITGTSTGIGRHAAVELAKKG--YTVYATVRKQADVDSLKKEGVNTLIPIVMDVTKPDQIASAVDTIKKGGHKLIGLVNNAGISARVPLEAHDLDRIRSMFEVNVFGVVSVTQAFLPMIRENKGRIVNVGSLAGFIAMPGSASYSATKFGLEGLNDALRREMAPFGVSVSIVEPAYVSTAIASKSTGEAAATRWVSREMQDTYA--WFFADFEEKRLKGEALADGPEVTTKAITHALTSRTPETRYIVANTYGIPAKIAALINWLLPDRLGDIV 306          
BLAST of NO26G00880 vs. NCBI_GenBank
Match: XP_001747089.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ88013.1 predicted protein [Monosiga brevicollis MX1])

HSP 1 Score: 208.4 bits (529), Expect = 3.300e-50
Identity = 121/286 (42.31%), Postives = 166/286 (58.04%), Query Frame = 0
Query:   27 RKEFIVHSSGAIIVTGASTGIGNHAAIHLATQHPLTTIYAGIRKDKDAEAIAALNMPNLLPLKLDTTDQASMDAAVAQVLTTGIPVIGLVNNAGVSNNSPLEFLPMPKLRQLLETNVVGPTYLTQKLTPALRASQGRVVQISSVLGKVTLATRGAYSASKHAFEALSDVFRLELANFGVSVSIVEPAYVKTEIFGKVQ--QDIDGMKSAELLELYGPLYYRADQAKKKQKQIEGGDSPMVTSEAIEHAMFHRFPKTRYVVANFAGIPADVCLYLNWLMPDRLLDLV 311
            R  + VH  G ++VTGAS+GIG HAAI LA       +Y  +RK++DA  I  L +  L P+ +D T+   +  AV  +     P+I LVNNAG+S+ +PLE   M ++R   E N+ G    TQ   P LRA++GR++ I SV G V +     YS +K A E +SD  R EL   GVSVS+VEPAYVKTEI  K    Q  +   S E+LE+Y   +  AD+  K+Q+  E  D+P  T+ AI  A+    P+TRYVVAN   IPA +   + WL+PDR +D +
Sbjct:   24 RPTYHVHEQGVVLVTGASSGIGRHAAIELAKLG--YEVYGTVRKERDANDIRGLGIKTLHPIIMDVTNSEQIKNAVETISKLDQPLIALVNNAGISSRAPLEAYDMNRVRNTFEVNIFGLVETTQAFLPLLRANKGRIINIGSVAGLVGMEGSAVYSGTKFALEGISDSLRRELFPLGVSVSLVEPAYVKTEIVHKSSGAQSAEHWASKEMLEVYDHFFSVADE--KRQRAFEHADTPECTTNAIVDAIRSPQPRTRYVVANTHKIPAWITTGMTWLLPDRAVDAI 305          
BLAST of NO26G00880 vs. NCBI_GenBank
Match: XP_005853543.1 (3-hydroxybutyrate dehydrogenase [Nannochloropsis gaditana CCMP526] >EKU22812.1 3-hydroxybutyrate dehydrogenase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 207.2 bits (526), Expect = 7.300e-50
Identity = 134/316 (42.41%), Postives = 184/316 (58.23%), Query Frame = 0
Query:    9 ALWGVLFALVPIVVDYATRKEF-IVHSSGAIIVTGASTGIGNHAAIHLATQHPLTTIYAGIRKDKDAEAIAA-----LNMPNLLPLKLDTTDQASMDAAVAQVLTT-----GIPVIGLVNNAGV-SNNSPLEFLPMPKLRQLLETNVVGPTYLTQKLTPALRASQGRVVQISSVLGKVTLATRGAYSASKHAFEALSDVFRLELANFGVSVSIVEPAYVKTEIFGK----VQQDIDGMKSAELLELYGPLYYRADQAKKKQKQIEGGDSPMVTSEAIEHAMFHRFPKTRYVVANFAGIPADVCLYLNWLMPDRLLD 309
            AL     A +P ++D ATR+E+ +    GA++VTGASTGIG HAA  LA    L  ++AG+RK+ D E + A      +  N++P+ LD T Q  +D AV  V +T     G P++GLVNNAGV  +N P+EF  M  LR L + N  G    T+     LRAS+GRV+ ISS+ G         Y ASK A EA SD  R+E+   GVSVS+VEPAYV + IFGK    V++  D + S +++E+YG L       +   + IE    P VTS+AI HA+  + P+TRYVVAN  G+ A V  ++ W+  DR+ D
Sbjct:    8 ALLVAFLASIPYLLDLATRREYPVPPPEGAVVVTGASTGIGAHAAHSLARAGFL--VFAGVRKELDGETLKAEAPTLESQENIVPIILDVTKQEQIDKAVQTVSSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLRASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIFGKIATRVKETADSV-SEKVMEVYGHLVQNPTYTR---RCIEKASPPTVTSDAILHALTAKHPQTRYVVANVDGLSAKVIGWMIWMFNDRIKD 317          
BLAST of NO26G00880 vs. NCBI_GenBank
Match: EWM21817.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana])

HSP 1 Score: 203.4 bits (516), Expect = 1.100e-48
Identity = 131/315 (41.59%), Postives = 181/315 (57.46%), Query Frame = 0
Query:    9 ALWGVLFALVPIVVDYATRKEF-IVHSSGAIIVTGASTGIGNHAAIHLATQHPLTTIYAGIRKDKDAEAIAA-----LNMPNLLPLKLDTTDQASMDAAVAQVLTT-----GIPVIGLVNNAGV-SNNSPLEFLPMPKLRQLLETNVVGPTYLTQKLTPALRASQGRVVQISSVLGKVTLATRGAYSASKHAFEALSDVFRLELANFGVSVSIVEPAYVKTEIFGKV---QQDIDGMKSAELLELYGPLYYRADQAKKKQKQIEGGDSPMVTSEAIEHAMFHRFPKTRYVVANFAGIPADVCLYLNWLMPDRLLD 309
            AL     A +P ++D ATR+E+ +    GA++VTGASTGIG HAA  LA    L  ++AG+RK+ D E + A      +  N++P+ LD T Q  +D AV  V +T     G P++GLVNNAGV  +N P+EF  M  LR L + N  G    T+     LRAS+GRV+ ISS+ G         Y ASK A EA SD  R+E+   GVSVS+VEPAYV + IFGK+    ++     S +++E+YG L       +   + IE    P VTS+AI  A+  + P+TRYVVAN  G+ A V  ++ W+  DR+ D
Sbjct:    8 ALLVAFLASIPYLLDLATRREYPVPPPEGAVVVTGASTGIGAHAAHSLARTGFL--VFAGVRKELDGETLKAEAPTLESQENIVPIILDVTKQEQIDKAVQTVSSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLRASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIFGKIATRMKETADSVSEKVMEVYGHLVQNPTYTR---RCIEKASPPTVTSDAILDALTAKHPQTRYVVANVDGLSAKVIGWMIWMFNDRIKD 317          
BLAST of NO26G00880 vs. NCBI_GenBank
Match: XP_005855962.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >EKU20405.1 short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 188.7 bits (478), Expect = 2.700e-44
Identity = 130/341 (38.12%), Postives = 175/341 (51.32%), Query Frame = 0
Query:    3 GALFIFALWGVLFALVPIVVDYATRKEF-------IVHSSGAIIVTGASTGIGNHAAIHLATQHPLTTIYAGIRKDKDAEAIAALNMPN---------------------LLPLKLDTTDQASMDAAVAQVLTT-----GIPVIGLVNNAGVSNNS-PLEFLPMPKLRQLLETNVVGPTYLTQKLTPALR-ASQGRVVQISSVLGKVTLATRGAYSASKHAFEALSDVFRLELANFGVSVSIVEPAYVKTEIFGKVQQDIDGMKSAELLELYGPLYYRADQAKKKQKQIEGGDSPMVTSEAIEHAMFHRFPKTRYVVANFAGIPADVCLYLNWLMPDRLLD 309
            G L  F +  +   L+P+VV   +RK +          + G ++VTGASTGIG HAA +LA Q  L  ++AG+RK  D EA+    +                       L  L LD T    + AAV  V        G+P +GLVNNAGV+  + P+EFLP+   R   E N  GP  +TQ   P LR A QGR++ +SS+ G VT      YS +K A EALSD  R+EL + GVSVS+++P Y+++EIFGK  +     +  EL E    LY       K    I     P+V S AI HA+   +PKTRY+V N  G PA    +  WL+ DRL+D
Sbjct:   12 GVLLAFGIMLLAVLLLPLVVYLISRKPYPTLKTLSSTKTLGGVLVTGASTGIGRHAAFYLARQGFL--VFAGVRKPADGEALLKAYLDEESKQTSKSRSRGKVSPAKQGVLHYLILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQAPQGRIINVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIFGKADEQ-HQHRMQELPEECSALYGHLYTVDKTNALIAKASDPIVCSRAIHHALTSPYPKTRYLVGNVNGTPAYWLGWGIWLLNDRLMD 349          
The following BLAST results are available for this feature:
BLAST of NO26G00880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854162.15.900e-12472.06short-chain dehydrogenase reductase sdr [Nannochlo... [more]
EWM25314.12.400e-6145.54short-chain dehydrogenase reductase sdr [Nannochlo... [more]
XP_005855521.12.400e-5645.731-acylglycerone phosphate reductase, partial [Nann... [more]
XP_005855590.11.400e-5342.53short-chain dehydrogenase reductase sdr [Nannochlo... [more]
EWM24343.11.400e-5341.77short-chain dehydrogenase reductase sdr [Nannochlo... [more]
XP_004990606.19.300e-5341.25oxidoreductase [Salpingoeca rosetta] >EGD77262.1 o... [more]
XP_001747089.13.300e-5042.31hypothetical protein [Monosiga brevicollis MX1] >E... [more]
XP_005853543.17.300e-5042.413-hydroxybutyrate dehydrogenase [Nannochloropsis g... [more]
EWM21817.11.100e-4841.59short-chain dehydrogenase reductase sdr [Nannochlo... [more]
XP_005855962.12.700e-4438.12short-chain dehydrogenase reductase sdr [Nannochlo... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL050nonsL050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL049nonsL049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR037ncniR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005980NSK005980Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G00880.1NO26G00880.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|600493gene_7909Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100229g6gene7321Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G00880.1NO26G00880.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G00880 ID=NO26G00880|Name=NO26G00880|organism=Nannochloropsis oceanica|type=gene|length=2357bp
CGTGTGCACCGATTTTTCCCTTCCGTGTGCGAATAAACTTTAGTAATTAT
ACACTACCCATCCACTCTCGCATTACAGCACTGGCTACACACAAAGACAT
GCTCACGCTTAAGCGATTTTTTGTATCGAGAGCCTCTGTACTTGACTGTA
TCGGACAGTCGAGCGCTGTCGCCTGCAGCAGCAGCAAAAATCAGCACACG
ACTCTTCCTGAAGCTCACACGCGGACAGGGCGCATACAATATCCGCATAT
CCGCGTGCTACTGTTACTGTCACCGTCCCGCTGTCAGCCGAAGCTCCCAC
CCTCATTTATCCTCTCTTGCATCCATTATTCCACGCATATCGTCACATCA
GCAGGAACGCAAGAAGAATGAAAGGCGCTCTCTTCATCTTCGCCCTCTGG
GGCGTCCTCTTTGCCTTGGTACCGATTGTGGTGGATTATGCCACGCGGAA
AGAATTTATTGTGCACAGCTCAGGTGCAATTATTGTCACTGgtacgttta
taataatggggctgacatggagacggagaaaagagcgcgaggcattcttg
acaagccgttccattcgcccctcctttgtcctggctgcaacaaaccactc
ccgcttgcctttgttagaagaaataggaaagatgaacggcgcgaatgccc
ttgatagtctcccttacccacatctcacgcatcccctctcctccttcctc
ccccttattccccccaagGGGCCTCAACTGGCATCGGGAACCACGCCGCC
ATCCACCTCGCCACCCAGCACCCCCTCACCACTATCTATGCCGGAATCCG
CAAGGACAAAGACGCCGAAGCCATTGCCGCCTTAAACATGCCCAACCTTC
TCCCCCTCAAGCTTGACACGACAGACCAAGCCTCCATGGACGCAGCCGTC
GCCCAGGTCCTTACCACCGGGATCCCAGTAATCGGCCTGGTCAACAATGC
TGGCGTCAGCAACAACTCCCCCCTTGAGTTTTTGCCCATGCCCAAACTAC
GACAACTGCTGGAAACCAACGTGGTAGGGCCCACGTACCTTACGCAGAAG
CTTACTCCTGCCCTCCGTGCATCCCAGGGACGTGTCGTGCAGATTTCCTC
CGTGCTGGGTAAAGTCACCTTGGCGACCCGTGGTGCTTACAGTGCTAGTA
AACACGCCTTTGAAGCCTTGAGCGATGTCTTTCGATTGGAGCTTGCTAAT
TTTGGAGTTTCTGTTTCAATTGTAGAGCCCGCATACGTCAAGACGGAGAT
TTTTGGAAAGGTACAACAAGATATCGATGGGATGAAATCAGCCGAGCTGT
TGGAGTTATACGGCCCCCTTTATTATCGAGCAGACCAAGCGAAGAAGAAA
CAAAAACAGATCGAGGGGGGGGATAGCCCGATGGTGACATCGGAGGCCAT
CGAGCATGCGATGTTCCACCGCTTCCCCAAGACCCGATATGTGGTGGCAA
ATTTCGCAGGCATACCGGCGGACGTGTGTTTGTATTTGAATTGGTTAATG
CCCGATCGGCTGCTCGATTTGGTCAAAAGCAAGATGTGAGTGGGAGAGCA
GGAAGAGGGAGGGGAGCGAGAGGGAGAAAGGAGGGGTAGAAGAAAGAAGC
TTTAAAGTAATAGAAAATCCCACTTATCCACTTGCATCCTGTCGTAGACC
CGGTTTCAAATCTCTCTTCCTTATAATCTCCGCAGACAGGCCTGTATCCT
TATCCTCTTATATATACTCAGGAACCATGGAGAGAGGGAGGAAGCCCGAT
CAATTCGAACTACTTTCACCACAATGTCCATTTATCTGTGTGCTATATAT
TCGCGTGTTACACTTGCTATGACCAACACCACTCTGTCGCAATTGCTACT
GCTGCTGCTGTGCTACTGCTGCTGCTGCTACTGATCACATTTACATTTGC
GCGCTGCGTCCTCTGGTTAATGACACATGGTCAAATTAGGCAAGCAATAA
CAGCAACAGTAGAAGGAGCAGCAGCCAGCCGTCAATGAAGAAGAAACGGC
GGATGAGAACGAATGCTATCACTCACCTTCTTCTTACAGAGGTGTGGTGC
GCACAGTCTTTACTTTACCGTAAGTCCTTTCTTCCCATCTCTCTCTTCCT
CCCCTTTAATTCTTCATGTCCTTACTCTTTAGCTCTTGAGAAACTATGTT
TACTCCAAAAGCATATCTCTATGGGTCCTTGACATTCCTACTTTCTCATC
CCCTGTCCTCCTCTCTCTCCTCCTTCCCTTCCTTATATCCGCCCCAGACA
TCTCCCCTCTATGCAGTCACACGACTCAAAATCGAGAAACGTAATTCCTA
ATCTTTAGATGAAAAACATTTCTTAAATCATTACCCCACCTCCCCACCCA
CTCCCCC
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protein sequence of NO26G00880.1

>NO26G00880.1-protein ID=NO26G00880.1-protein|Name=NO26G00880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=315bp
MKGALFIFALWGVLFALVPIVVDYATRKEFIVHSSGAIIVTGASTGIGNH
AAIHLATQHPLTTIYAGIRKDKDAEAIAALNMPNLLPLKLDTTDQASMDA
AVAQVLTTGIPVIGLVNNAGVSNNSPLEFLPMPKLRQLLETNVVGPTYLT
QKLTPALRASQGRVVQISSVLGKVTLATRGAYSASKHAFEALSDVFRLEL
ANFGVSVSIVEPAYVKTEIFGKVQQDIDGMKSAELLELYGPLYYRADQAK
KKQKQIEGGDSPMVTSEAIEHAMFHRFPKTRYVVANFAGIPADVCLYLNW
LMPDRLLDLVKSKM*
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Synonyms
Publications