NO26G00830, NO26G00830 (gene) Nannochloropsis oceanica

Overview
NameNO26G00830
Unique NameNO26G00830
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3635
Alignment locationchr26:276123..279757 +

Link to JBrowse

Properties
Property NameValue
DescriptionMAPK phosphatase 2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:276123..279757 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016791phosphatase activity
GO:0008138protein tyrosine/serine/threonine phosphatase activity
Vocabulary: Biological Process
TermDefinition
GO:0006470protein dephosphorylation
GO:0016311dephosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR029021Prot-tyrosine_phosphatase-like
IPR000387Tyr/Dual-sp_Pase
IPR020422Dual-sp_phosphatase_subgr_cat
IPR024950DUSP
IPR000340Dual-sp_phosphatase_cat-dom
Homology
[Close]
BLAST of NO26G00830 vs. NCBI_GenBank
Match: ETI47032.1 (hypothetical protein F443_08647 [Phytophthora parasitica P1569])

HSP 1 Score: 77.8 bits (190), Expect = 6.700e-11
Identity = 36/90 (40.00%), Postives = 59/90 (65.56%), Query Frame = 0 
Query:    1 MPGAIAFIEQAKHYGSVLVHCNKGVSRSASFVLGYLMQTGGLSLPSSSSLLRSKRKICQPNDSFMEQLKKFDEEVKERRRDEEGRQAKHG 91
            + G IAF++QAK+YG +LVHCNKGVSRS+S V+ YLM+   +S   + + +  +R I  PN+SF  QL++++  ++     ++G +   G
Sbjct:  114 LEGCIAFMDQAKYYGRILVHCNKGVSRSSSMVVAYLMKLRSMSFEQALAFVTERRPIANPNESFRRQLQEYERRLQRSAPKDKGARVARG 203
[Close]
BLAST of NO26G00830 vs. NCBI_GenBank
Match: ETK86960.1 (hypothetical protein L915_08481 [Phytophthora parasitica])

HSP 1 Score: 77.8 bits (190), Expect = 6.700e-11
Identity = 36/90 (40.00%), Postives = 59/90 (65.56%), Query Frame = 0 
Query:    1 MPGAIAFIEQAKHYGSVLVHCNKGVSRSASFVLGYLMQTGGLSLPSSSSLLRSKRKICQPNDSFMEQLKKFDEEVKERRRDEEGRQAKHG 91
            + G IAF++QAK+YG +LVHCNKGVSRS+S V+ YLM+   +S   + + +  +R I  PN+SF  QL++++  ++     ++G +   G
Sbjct:  125 LEGCIAFMDQAKYYGRILVHCNKGVSRSSSMVVAYLMKLRSMSFEQALAFVTERRPIANPNESFRRQLQEYERRLQRSAPKDKGARVARG 214
[Close]
BLAST of NO26G00830 vs. NCBI_GenBank
Match: ETL40374.1 (hypothetical protein L916_08410 [Phytophthora parasitica])

HSP 1 Score: 77.8 bits (190), Expect = 6.700e-11
Identity = 36/90 (40.00%), Postives = 59/90 (65.56%), Query Frame = 0 
Query:    1 MPGAIAFIEQAKHYGSVLVHCNKGVSRSASFVLGYLMQTGGLSLPSSSSLLRSKRKICQPNDSFMEQLKKFDEEVKERRRDEEGRQAKHG 91
            + G IAF++QAK+YG +LVHCNKGVSRS+S V+ YLM+   +S   + + +  +R I  PN+SF  QL++++  ++     ++G +   G
Sbjct:  134 LEGCIAFMDQAKYYGRILVHCNKGVSRSSSMVVAYLMKLRSMSFEQALAFVTERRPIANPNESFRRQLQEYERRLQRSAPKDKGARVARG 223
[Close]
BLAST of NO26G00830 vs. NCBI_GenBank
Match: ETL93526.1 (hypothetical protein L917_08308 [Phytophthora parasitica] >ETL93527.1 hypothetical protein, variant 1 [Phytophthora parasitica])

HSP 1 Score: 77.8 bits (190), Expect = 6.700e-11
Identity = 36/90 (40.00%), Postives = 59/90 (65.56%), Query Frame = 0 
Query:    1 MPGAIAFIEQAKHYGSVLVHCNKGVSRSASFVLGYLMQTGGLSLPSSSSLLRSKRKICQPNDSFMEQLKKFDEEVKERRRDEEGRQAKHG 91
            + G IAF++QAK+YG +LVHCNKGVSRS+S V+ YLM+   +S   + + +  +R I  PN+SF  QL++++  ++     ++G +   G
Sbjct:   82 LEGCIAFMDQAKYYGRILVHCNKGVSRSSSMVVAYLMKLRSMSFEQALAFVTERRPIANPNESFRRQLQEYERRLQRSAPKDKGARVARG 171
[Close]
BLAST of NO26G00830 vs. NCBI_GenBank
Match: ETL93528.1 (hypothetical protein, variant 2 [Phytophthora parasitica])

HSP 1 Score: 77.8 bits (190), Expect = 6.700e-11
Identity = 36/90 (40.00%), Postives = 59/90 (65.56%), Query Frame = 0 
Query:    1 MPGAIAFIEQAKHYGSVLVHCNKGVSRSASFVLGYLMQTGGLSLPSSSSLLRSKRKICQPNDSFMEQLKKFDEEVKERRRDEEGRQAKHG 91
            + G IAF++QAK+YG +LVHCNKGVSRS+S V+ YLM+   +S   + + +  +R I  PN+SF  QL++++  ++     ++G +   G
Sbjct:   49 LEGCIAFMDQAKYYGRILVHCNKGVSRSSSMVVAYLMKLRSMSFEQALAFVTERRPIANPNESFRRQLQEYERRLQRSAPKDKGARVARG 138
[Close]
BLAST of NO26G00830 vs. NCBI_GenBank
Match: ETM46787.1 (hypothetical protein L914_08359 [Phytophthora parasitica])

HSP 1 Score: 77.8 bits (190), Expect = 6.700e-11
Identity = 36/90 (40.00%), Postives = 59/90 (65.56%), Query Frame = 0 
Query:    1 MPGAIAFIEQAKHYGSVLVHCNKGVSRSASFVLGYLMQTGGLSLPSSSSLLRSKRKICQPNDSFMEQLKKFDEEVKERRRDEEGRQAKHG 91
            + G IAF++QAK+YG +LVHCNKGVSRS+S V+ YLM+   +S   + + +  +R I  PN+SF  QL++++  ++     ++G +   G
Sbjct:  135 LEGCIAFMDQAKYYGRILVHCNKGVSRSSSMVVAYLMKLRSMSFEQALAFVTERRPIANPNESFRRQLQEYERRLQRSAPKDKGARVARG 224
[Close]
BLAST of NO26G00830 vs. NCBI_GenBank
Match: XP_008905482.1 (hypothetical protein PPTG_22900 [Phytophthora parasitica INRA-310] >ETN08921.1 hypothetical protein PPTG_22900 [Phytophthora parasitica INRA-310])

HSP 1 Score: 77.8 bits (190), Expect = 6.700e-11
Identity = 36/90 (40.00%), Postives = 59/90 (65.56%), Query Frame = 0 
Query:    1 MPGAIAFIEQAKHYGSVLVHCNKGVSRSASFVLGYLMQTGGLSLPSSSSLLRSKRKICQPNDSFMEQLKKFDEEVKERRRDEEGRQAKHG 91
            + G IAF++QAK+YG +LVHCNKGVSRS+S V+ YLM+   +S   + + +  +R I  PN+SF  QL++++  ++     ++G +   G
Sbjct:   82 LEGCIAFMDQAKYYGRILVHCNKGVSRSSSMVVAYLMKLRSMSFEQALAFVTERRPIANPNESFRRQLQEYERRLQRSAPTDKGARVARG 171
[Close]
BLAST of NO26G00830 vs. NCBI_GenBank
Match: ETO75756.1 (hypothetical protein F444_08703 [Phytophthora parasitica P1976])

HSP 1 Score: 77.8 bits (190), Expect = 6.700e-11
Identity = 36/90 (40.00%), Postives = 59/90 (65.56%), Query Frame = 0 
Query:    1 MPGAIAFIEQAKHYGSVLVHCNKGVSRSASFVLGYLMQTGGLSLPSSSSLLRSKRKICQPNDSFMEQLKKFDEEVKERRRDEEGRQAKHG 91
            + G IAF++QAK+YG +LVHCNKGVSRS+S V+ YLM+   +S   + + +  +R I  PN+SF  QL++++  ++     ++G +   G
Sbjct:  126 LEGCIAFMDQAKYYGRILVHCNKGVSRSSSMVVAYLMKLRSMSFEQALAFVTERRPIANPNESFRRQLQEYERRLQRSAPKDKGARVARG 215
[Close]
BLAST of NO26G00830 vs. NCBI_GenBank
Match: ETP16823.1 (hypothetical protein F441_08624 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 77.8 bits (190), Expect = 6.700e-11
Identity = 36/90 (40.00%), Postives = 59/90 (65.56%), Query Frame = 0 
Query:    1 MPGAIAFIEQAKHYGSVLVHCNKGVSRSASFVLGYLMQTGGLSLPSSSSLLRSKRKICQPNDSFMEQLKKFDEEVKERRRDEEGRQAKHG 91
            + G IAF++QAK+YG +LVHCNKGVSRS+S V+ YLM+   +S   + + +  +R I  PN+SF  QL++++  ++     ++G +   G
Sbjct:  114 LEGCIAFMDQAKYYGRILVHCNKGVSRSSSMVVAYLMKLRSMSFEQALAFVTERRPIANPNESFRRQLQEYERRLQRSAPKDKGARVARG 203
[Close]
BLAST of NO26G00830 vs. NCBI_GenBank
Match: ETP44880.1 (hypothetical protein F442_08579 [Phytophthora parasitica P10297])

HSP 1 Score: 77.8 bits (190), Expect = 6.700e-11
Identity = 36/90 (40.00%), Postives = 59/90 (65.56%), Query Frame = 0 
Query:    1 MPGAIAFIEQAKHYGSVLVHCNKGVSRSASFVLGYLMQTGGLSLPSSSSLLRSKRKICQPNDSFMEQLKKFDEEVKERRRDEEGRQAKHG 91
            + G IAF++QAK+YG +LVHCNKGVSRS+S V+ YLM+   +S   + + +  +R I  PN+SF  QL++++  ++     ++G +   G
Sbjct:  121 LEGCIAFMDQAKYYGRILVHCNKGVSRSSSMVVAYLMKLRSMSFEQALAFVTERRPIANPNESFRRQLQEYERRLQRSAPKDKGARVARG 210
The following BLAST results are available for this feature:
BLAST of NO26G00830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
ETI47032.16.700e-1140.00hypothetical protein F443_08647 [Phytophthora para... [more]
ETK86960.16.700e-1140.00hypothetical protein L915_08481 [Phytophthora para... [more]
ETL40374.16.700e-1140.00hypothetical protein L916_08410 [Phytophthora para... [more]
ETL93526.16.700e-1140.00hypothetical protein L917_08308 [Phytophthora para... [more]
ETL93528.16.700e-1140.00hypothetical protein, variant 2 [Phytophthora para... [more]
ETM46787.16.700e-1140.00hypothetical protein L914_08359 [Phytophthora para... [more]
XP_008905482.16.700e-1140.00hypothetical protein PPTG_22900 [Phytophthora para... [more]
ETO75756.16.700e-1140.00hypothetical protein F444_08703 [Phytophthora para... [more]
ETP16823.16.700e-1140.00hypothetical protein F441_08624 [Phytophthora para... [more]
ETP44880.16.700e-1140.00hypothetical protein F442_08579 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL050nonsL050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL049nonsL049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR037ncniR037Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005992NSK005992Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G00830.1NO26G00830.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO26G00830.2NO26G00830.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G00830.1NO26G00830.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO26G00830.2NO26G00830.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G00830 ID=NO26G00830|Name=NO26G00830|organism=Nannochloropsis oceanica|type=gene|length=3635bp
CTCCCTCCCCCCCTCTCTCGGCTCTCACCCTATCCACCTTCCTCTGAACA
TGACTGGCGAAGTCCAGCTCCAAATGAATGCGTGCCCTTCCCGGTAAAAT
GGCTTTCCACAGCTCCCCCTCTTCCTCCTCCTCCTCCTCCTCTTCCTCTT
CTCCATCGTTCCCTCCCTCTCCCTCCAAAGCAGTGGAGTGAGGGAAGGAT
GAAGGGACGGCAGGGACGTACCGCTCTCCCTCCTCCTTCTCCAGCATATT
TCGCAGAAGCTCTAAGGTACGCCTGAACTCGTCCTGGTCCTCGACCACCA
CCCCTCCTTCCCTGCCTCCCAGCCTGCTGATGCCTTTCGCCACGCTCAGG
AGTCGCTGACATAGCCCCTGCTCCCTCCCTCCCTCTCTCCCTCCCTCCGT
AGCAGCACTTGTCGCCTTGGCGTACCTTCTCTGCGTGTCCGTCAAGCGGC
TTGTCCCTCGTGCCAGCCTAAGCGCATTCGCAGCACTAAGACCGGCCTCG
GCCGCGACCTCGATCGCTCCCTCCCTCCCGTCCTCCCTCGCCAGAGCCAA
CTCCAATACCTCCCTCCCTCCTTCCCTTCCTCCCTGCACCCTTCGATGCT
TGATTAATTCTTGCTTCGCCCTTGCCCAATCATCGTCTTCCCACCTCAGT
TGGGCACGATGCGCCGAGGTCTCTGCCGCTTCGCTTGCTTCGTCTAAAGC
ATTGGCGATAATCTGGGCATATTGGTGATCAAAGTAGCCGTCCAAATCCA
TGTCTACAGGTGATGACACCTCTGTACTCGCCGCAGTCGTCGGAGGAAGA
GCAGAGGAAATAGGTTGAAAGGCAGATTTTACCCCCAAGGAATAAGCTAA
TCGATTCATGCCCTCCACCTGTTCGCTTGGGAGGAACGCTCGTGCCTTGC
TTAGAACTTGATCACCCATCCCTCCACCCATTCCCCCTCCCCCCCCCCCC
CCACTCAACGCAGCTACATTTGCGGCCCGTTGTTGCAGAGAAAGAATGTC
TTGATTAAGCCCGGGAATCCCATCTTTGTTGATGGTCCGGGCACGCAAGG
CCTCAGCCTGCACGAGGGTTTCGTGGAGCTCGGGCATTGTGTATGCCTGT
ACCGTTTAAGAGAGGGATGAGAGTTTGATGGCTGAGAATATTGAGGATGC
TGGCAACCGGCGCGAGTTGGTTTCAGAGGATCTGGTAGAAATCAAGCATA
TCCCCACGCTTGCGCATGCGCATTGCCATGGCAGGTAGTGTGAGGATGGC
GTGGACGGACAAGTGTTCTTCGACGGGTGCGGTGGTTGTCGGCGAGCAGC
TTGGGCATGCGGTTTGGCACAGGATGCACCAAAGATACAGGCCGCGGCTG
TCGTTCGCAGCCTAACAGAGGGATGAGGACGGATTCTCTGTGTTTTGTCT
TGCAAGTGTGCATCTAGCCGAAGGGCTGGGATTATGGTGAGAATGCCAAA
GTCACTGGCAGCTTATGATGATGACCCTAACTTCGCTGACCGGTTGCACT
CGACAATTTCCTAAACCCAAAGAACCAAACGTGCGCGCAATACCCTCAAT
GTAAATATGCTCCGCCCCCCACACAAAAGCAATTGCAGCTGTGGTAGTCC
CAGCCCAAGTGAAGCGCGCTGTATCATGCCCAAAAGCAAGGGTCCCGATA
AGGTAAGCAGTAAGAAGGACCCCAACTTTTCCTTTCCCCTCCTTCCGATG
ACTCTCTTGCGAGTAGGAGGATCAGCAGTGCTTCTGTCACTCCCAGTCTA
TCATGGTCTATCATCCGCACGATAGACTTTTATCTTATCGTAGTCGTGTT
GCTCGACCTCAAATCTCATTCCTCTCCTCCTCACCTCTCCCGCTTCCTTC
CCTACTTCCCCTCCCCATACTCCGTGGTTTGGCGCACGCCCCTCCACCGT
CCGCTCTTTTTTATTGACGGGTGTAGGTGGTGGATTTTAAGACCTTTGGG
GATCGCCCCGCCCGTGGCCGGTCAACTGCTTTATACATTGGTTCCAAGGT
CGATGCGAGAAATGAGACCGGGCTGAGGGAGAGGGGGATCACTCACATTC
TCAATTGCACTCCACCACGCAGgtacgacgaaaggacagggaagaaggat
taaggagggagaatggggcaaattattgcataaggatttctccatcgtgt
ttcttgtcatgcttcctcatcctcccccttcctgccttctttcctccctc
cctcagCCTGGACCCGGAAAGCGGCTGCCCAAATTTCTTTGAAAGTACAA
GCAAAAGCCTCACGTACAAGCGAATCCCCATTTTCGATAATCGAGGAGAG
GATATTCTGTCGTACATGCCGGGGGCGATAGCTTTCATTGAGCAGGCCAA
GCATTATGGGAGCGTGCTTgtacgttaaaaaatgatttatttattgattt
ttttattcgttgtttcctcccctttggaatgtatatatatacctcccatc
ctgtcttacccacttcccgtcctgtagGTGCACTGCAACAAGGGAGTCAG
CCGCTCCGCTTCGTTCGTGCTGGGGTACTTGATGCAGACAGGTGGTCTCT
CCCTCCCTTCCTCGTCCTCCCTCCTTCGTTCTAAGAGAAAGATCTGTCAG
CCCAATGATTCATTTATGGAACAATTGAAGAAATTCGATGAGGAGGTGAA
GGAGAGAAGGAGGGACGAGGAGGGGAGGCAGGCCAAGCACGGGACAAGAG
ATACACAGAAAAAAGAAGGAGGAGAAGGAGGGGAAGAAGGAGGACGTGTG
ATTAAAGCTCCGTTGGTTGGTAAAGCTCCGTTGGTTGGTCCTGTGCGATG
TCCGGGAGGAGGAGGAGGAGGAAAAAAAGGAGAAGGAGGAGGAGAAGGAG
GAAGGGAGGGAGGACGGATTGGCCCATCGATGCCTCGACATTTGATACAG
CAGCAGCAACAGCAGCAACAAGAAGTCATGGAAGGAGACACGGAGGGAAA
CGAGGGGAGGGGGGTTAAAGGAGGGTCGTCGTTGAAAAGAAAGCATGAGC
ATGCCATCGGTCCTTCCCGCACGCCTTCCTCTTCCTCCTTTTCTAACTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCAATCCTTCCTCCAT
GGGCCCGAGTCTTCCTCTGACCCCTTTTCCTCCTGTTTTGGCAGCTGCTG
CCACTGCAGCCTCTCCTTCATCCTCCCCCCTCACCTTGCCACCGCCGCCA
CCACCACCATCGCCGCCGCCGCCGCAGCAGCAGCAGCAGTACAAGACTAT
CACAGGACCCTCTCCTCCAAGTATGTTGAATAACATGGAAGGGACAGCTA
CAGAGGAAGAGCAGCAGGAGCAGCACAAGAAACCGAGTGAAAAGCACCCA
AACATAAACAATTAAATAAAGAAAAAGTACGCGTGTGTGTATAAATGTGC
AACAATGATAATCATATCAAAGGTAAAATAAGTATAAATTCGGGGTGGAG
TAGAAAAACATGGAGGATTTCAATCCTAAATTCCCACCGTTACAATAATC
TTCCCCTTCTTTCTTTTCTTAGTCATAATATTTATCCGACAAGCCTTTCA
ATGGCCCGCTGCCTCTCCATGGCGCGCGCACACACACAGACACACACCCA
GACACAGACACACACACACAGAGACACCCAGACAT
back to top

protein sequence of NO26G00830.1

>NO26G00830.1-protein ID=NO26G00830.1-protein|Name=NO26G00830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=314bp
MPGAIAFIEQAKHYGSVLVHCNKGVSRSASFVLGYLMQTGGLSLPSSSSL
LRSKRKICQPNDSFMEQLKKFDEEVKERRRDEEGRQAKHGTRDTQKKEGG
EGGEEGGRVIKAPLVGKAPLVGPVRCPGGGGGGKKGEGGGEGGREGGRIG
PSMPRHLIQQQQQQQQEVMEGDTEGNEGRGVKGGSSLKRKHEHAIGPSRT
PSSSSFSNSSSSSSSSSSSSSNPSSMGPSLPLTPFPPVLAAAATAASPSS
SPLTLPPPPPPPSPPPPQQQQQYKTITGPSPPSMLNNMEGTATEEEQQEQ
HKKPSEKHPNINN*
back to top

protein sequence of NO26G00830.2

>NO26G00830.2-protein ID=NO26G00830.2-protein|Name=NO26G00830.2|organism=Nannochloropsis oceanica|type=polypeptide|length=314bp
MPGAIAFIEQAKHYGSVLVHCNKGVSRSASFVLGYLMQTGGLSLPSSSSL
LRSKRKICQPNDSFMEQLKKFDEEVKERRRDEEGRQAKHGTRDTQKKEGG
EGGEEGGRVIKAPLVGKAPLVGPVRCPGGGGGGKKGEGGGEGGREGGRIG
PSMPRHLIQQQQQQQQEVMEGDTEGNEGRGVKGGSSLKRKHEHAIGPSRT
PSSSSFSNSSSSSSSSSSSSSNPSSMGPSLPLTPFPPVLAAAATAASPSS
SPLTLPPPPPPPSPPPPQQQQQYKTITGPSPPSMLNNMEGTATEEEQQEQ
HKKPSEKHPNINN*
back to top
Synonyms
Publications