NO26G00330, NO26G00330 (gene) Nannochloropsis oceanica

Overview
NameNO26G00330
Unique NameNO26G00330
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1095
Alignment locationchr26:103637..104731 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:103637..104731 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO26G00330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR009ncniR009Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G00330.1NO26G00330.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G00330.1NO26G00330.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G00330 ID=NO26G00330|Name=NO26G00330|organism=Nannochloropsis oceanica|type=gene|length=1095bp
ATGTCCCGTCTCACTACCACAACCGCCAGCAAGCGCTTTGAAACTACGGC
CAAAAGTGCCCAAGCCTACATCCATTCTCTCTCCACCACCGCCTCCGCCC
TCCTCCAACCTCACTCGCGCACCATACCTACATATGCTAACACAAAAACA
AACTGGGTCCTTGGCACGGACCGGGTGCTGTACGAGACCGATGCGATGGC
CCGTCAGAAAGACTATCAAAAGGCAGGCATGGAAGGCCCAGAAGGAGAGC
GGGAGGCTTTCTATCTTGACATACAGAAACAAAAGGCGGAAAATCGGGCG
TTGAAAAGAGCTTTGACGGCTACCCATTTCACCCTGGCTGATAATCATAC
CATAAACAAGGGGATACGAGGAGCAGGGATGGGTGGAGAGTACGGCTACC
AGGATGAAAGCGATGCCGGCGACTGGGAGGAGGAGGAGGAAGAGGATGAT
ACTTACGGGAAACGGACGACTGTCGCCTTCGTCTCTTCTTCCTCGTCACC
TTATTCAGCATATTCTACTCCCATTCCCGCCGCCGGAGCATGCATCAAAG
ATAGACACAACAAGACACATTTTAGTTTGGGGACTGACAAGAATGACTAC
AGCTCCTCCTCCCGTGACATGAACCACCTTATTGAGGAAGAGGAGGCCGT
GAGAGAGGAAGGAAAGACAGGAGAGTATAAGAAGGAGTATGAGGCCCGAC
GGCTGGAGGTGGCGGAGATGAGGGAGGCCTTGACCAGGACCCATATTACC
TTTGGCGACGAAGGAAGGGGAGGAGGCGGAGGGAAGGGGCAGGGGAGGGA
GGGAAGTGCGTACACCACGCAATACCAGGATGTGTTCAGGCCAAAAACTG
GCATGCAATCTCCTTCTACTTTCGAATTTCCGACTCACAAAAGTGGCCTG
CCCTTCCTCCCTTGTGGCCGCTTGCTGGATGAGGGGGAGAAGGTAGATTA
TACCACAACCAGCATGGCACTCATGGGAAAGACGCCCTTGCCCGAGGCGC
AGGATAGAAACGAGGCCGTGACGCGGGCGAGGGCAATGAAAACTGAGTTG
ATGAGGAGTCACGCCGATTTCGCACTGGACCCGGAGTATCTTTAA
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protein sequence of NO26G00330.1

>NO26G00330.1-protein ID=NO26G00330.1-protein|Name=NO26G00330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=365bp
MSRLTTTTASKRFETTAKSAQAYIHSLSTTASALLQPHSRTIPTYANTKT
NWVLGTDRVLYETDAMARQKDYQKAGMEGPEGEREAFYLDIQKQKAENRA
LKRALTATHFTLADNHTINKGIRGAGMGGEYGYQDESDAGDWEEEEEEDD
TYGKRTTVAFVSSSSSPYSAYSTPIPAAGACIKDRHNKTHFSLGTDKNDY
SSSSRDMNHLIEEEEAVREEGKTGEYKKEYEARRLEVAEMREALTRTHIT
FGDEGRGGGGGKGQGREGSAYTTQYQDVFRPKTGMQSPSTFEFPTHKSGL
PFLPCGRLLDEGEKVDYTTTSMALMGKTPLPEAQDRNEAVTRARAMKTEL
MRSHADFALDPEYL*
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Synonyms
Publications