NO26G00330.1, NO26G00330.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO26G00330.1
Unique NameNO26G00330.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1095
Alignment locationchr26:103637..104731 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:103637..104731 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO26G00330.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO26G00330NO26G00330Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO26G00330.1NO26G00330.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO26G00330.1.cds1NO26G00330.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO26G00330.1 ID=NO26G00330.1|Name=NO26G00330.1|organism=Nannochloropsis oceanica|type=mRNA|length=1095bp
ATGTCCCGTCTCACTACCACAACCGCCAGCAAGCGCTTTGAAACTACGGC
CAAAAGTGCCCAAGCCTACATCCATTCTCTCTCCACCACCGCCTCCGCCC
TCCTCCAACCTCACTCGCGCACCATACCTACATATGCTAACACAAAAACA
AACTGGGTCCTTGGCACGGACCGGGTGCTGTACGAGACCGATGCGATGGC
CCGTCAGAAAGACTATCAAAAGGCAGGCATGGAAGGCCCAGAAGGAGAGC
GGGAGGCTTTCTATCTTGACATACAGAAACAAAAGGCGGAAAATCGGGCG
TTGAAAAGAGCTTTGACGGCTACCCATTTCACCCTGGCTGATAATCATAC
CATAAACAAGGGGATACGAGGAGCAGGGATGGGTGGAGAGTACGGCTACC
AGGATGAAAGCGATGCCGGCGACTGGGAGGAGGAGGAGGAAGAGGATGAT
ACTTACGGGAAACGGACGACTGTCGCCTTCGTCTCTTCTTCCTCGTCACC
TTATTCAGCATATTCTACTCCCATTCCCGCCGCCGGAGCATGCATCAAAG
ATAGACACAACAAGACACATTTTAGTTTGGGGACTGACAAGAATGACTAC
AGCTCCTCCTCCCGTGACATGAACCACCTTATTGAGGAAGAGGAGGCCGT
GAGAGAGGAAGGAAAGACAGGAGAGTATAAGAAGGAGTATGAGGCCCGAC
GGCTGGAGGTGGCGGAGATGAGGGAGGCCTTGACCAGGACCCATATTACC
TTTGGCGACGAAGGAAGGGGAGGAGGCGGAGGGAAGGGGCAGGGGAGGGA
GGGAAGTGCGTACACCACGCAATACCAGGATGTGTTCAGGCCAAAAACTG
GCATGCAATCTCCTTCTACTTTCGAATTTCCGACTCACAAAAGTGGCCTG
CCCTTCCTCCCTTGTGGCCGCTTGCTGGATGAGGGGGAGAAGGTAGATTA
TACCACAACCAGCATGGCACTCATGGGAAAGACGCCCTTGCCCGAGGCGC
AGGATAGAAACGAGGCCGTGACGCGGGCGAGGGCAATGAAAACTGAGTTG
ATGAGGAGTCACGCCGATTTCGCACTGGACCCGGAGTATCTTTAA
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protein sequence of NO26G00330.1

>NO26G00330.1-protein ID=NO26G00330.1-protein|Name=NO26G00330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=365bp
MSRLTTTTASKRFETTAKSAQAYIHSLSTTASALLQPHSRTIPTYANTKT
NWVLGTDRVLYETDAMARQKDYQKAGMEGPEGEREAFYLDIQKQKAENRA
LKRALTATHFTLADNHTINKGIRGAGMGGEYGYQDESDAGDWEEEEEEDD
TYGKRTTVAFVSSSSSPYSAYSTPIPAAGACIKDRHNKTHFSLGTDKNDY
SSSSRDMNHLIEEEEAVREEGKTGEYKKEYEARRLEVAEMREALTRTHIT
FGDEGRGGGGGKGQGREGSAYTTQYQDVFRPKTGMQSPSTFEFPTHKSGL
PFLPCGRLLDEGEKVDYTTTSMALMGKTPLPEAQDRNEAVTRARAMKTEL
MRSHADFALDPEYL*
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mRNA from alignment at chr26:103637..104731+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO26G00330.1 ID=NO26G00330.1|Name=NO26G00330.1|organism=Nannochloropsis oceanica|type=mRNA|length=1095bp|location=Sequence derived from alignment at chr26:103637..104731+ (Nannochloropsis oceanica)
ATGTCCCGTCTCACTACCACAACCGCCAGCAAGCGCTTTGAAACTACGGC
CAAAAGTGCCCAAGCCTACATCCATTCTCTCTCCACCACCGCCTCCGCCC
TCCTCCAACCTCACTCGCGCACCATACCTACATATGCTAACACAAAAACA
AACTGGGTCCTTGGCACGGACCGGGTGCTGTACGAGACCGATGCGATGGC
CCGTCAGAAAGACTATCAAAAGGCAGGCATGGAAGGCCCAGAAGGAGAGC
GGGAGGCTTTCTATCTTGACATACAGAAACAAAAGGCGGAAAATCGGGCG
TTGAAAAGAGCTTTGACGGCTACCCATTTCACCCTGGCTGATAATCATAC
CATAAACAAGGGGATACGAGGAGCAGGGATGGGTGGAGAGTACGGCTACC
AGGATGAAAGCGATGCCGGCGACTGGGAGGAGGAGGAGGAAGAGGATGAT
ACTTACGGGAAACGGACGACTGTCGCCTTCGTCTCTTCTTCCTCGTCACC
TTATTCAGCATATTCTACTCCCATTCCCGCCGCCGGAGCATGCATCAAAG
ATAGACACAACAAGACACATTTTAGTTTGGGGACTGACAAGAATGACTAC
AGCTCCTCCTCCCGTGACATGAACCACCTTATTGAGGAAGAGGAGGCCGT
GAGAGAGGAAGGAAAGACAGGAGAGTATAAGAAGGAGTATGAGGCCCGAC
GGCTGGAGGTGGCGGAGATGAGGGAGGCCTTGACCAGGACCCATATTACC
TTTGGCGACGAAGGAAGGGGAGGAGGCGGAGGGAAGGGGCAGGGGAGGGA
GGGAAGTGCGTACACCACGCAATACCAGGATGTGTTCAGGCCAAAAACTG
GCATGCAATCTCCTTCTACTTTCGAATTTCCGACTCACAAAAGTGGCCTG
CCCTTCCTCCCTTGTGGCCGCTTGCTGGATGAGGGGGAGAAGGTAGATTA
TACCACAACCAGCATGGCACTCATGGGAAAGACGCCCTTGCCCGAGGCGC
AGGATAGAAACGAGGCCGTGACGCGGGCGAGGGCAATGAAAACTGAGTTG
ATGAGGAGTCACGCCGATTTCGCACTGGACCCGGAGTATCTTTAA
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Coding sequence (CDS) from alignment at chr26:103637..104731+

>NO26G00330.1 ID=NO26G00330.1|Name=NO26G00330.1|organism=Nannochloropsis oceanica|type=CDS|length=1095bp|location=Sequence derived from alignment at chr26:103637..104731+ (Nannochloropsis oceanica)
ATGTCCCGTCTCACTACCACAACCGCCAGCAAGCGCTTTGAAACTACGGC
CAAAAGTGCCCAAGCCTACATCCATTCTCTCTCCACCACCGCCTCCGCCC
TCCTCCAACCTCACTCGCGCACCATACCTACATATGCTAACACAAAAACA
AACTGGGTCCTTGGCACGGACCGGGTGCTGTACGAGACCGATGCGATGGC
CCGTCAGAAAGACTATCAAAAGGCAGGCATGGAAGGCCCAGAAGGAGAGC
GGGAGGCTTTCTATCTTGACATACAGAAACAAAAGGCGGAAAATCGGGCG
TTGAAAAGAGCTTTGACGGCTACCCATTTCACCCTGGCTGATAATCATAC
CATAAACAAGGGGATACGAGGAGCAGGGATGGGTGGAGAGTACGGCTACC
AGGATGAAAGCGATGCCGGCGACTGGGAGGAGGAGGAGGAAGAGGATGAT
ACTTACGGGAAACGGACGACTGTCGCCTTCGTCTCTTCTTCCTCGTCACC
TTATTCAGCATATTCTACTCCCATTCCCGCCGCCGGAGCATGCATCAAAG
ATAGACACAACAAGACACATTTTAGTTTGGGGACTGACAAGAATGACTAC
AGCTCCTCCTCCCGTGACATGAACCACCTTATTGAGGAAGAGGAGGCCGT
GAGAGAGGAAGGAAAGACAGGAGAGTATAAGAAGGAGTATGAGGCCCGAC
GGCTGGAGGTGGCGGAGATGAGGGAGGCCTTGACCAGGACCCATATTACC
TTTGGCGACGAAGGAAGGGGAGGAGGCGGAGGGAAGGGGCAGGGGAGGGA
GGGAAGTGCGTACACCACGCAATACCAGGATGTGTTCAGGCCAAAAACTG
GCATGCAATCTCCTTCTACTTTCGAATTTCCGACTCACAAAAGTGGCCTG
CCCTTCCTCCCTTGTGGCCGCTTGCTGGATGAGGGGGAGAAGGTAGATTA
TACCACAACCAGCATGGCACTCATGGGAAAGACGCCCTTGCCCGAGGCGC
AGGATAGAAACGAGGCCGTGACGCGGGCGAGGGCAATGAAAACTGAGTTG
ATGAGGAGTCACGCCGATTTCGCACTGGACCCGGAGTATCTTTAA
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Synonyms
Publications