NO26G00320, NO26G00320 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G00320 vs. NCBI_GenBank
Match: EWM23073.1 (putative 39s ribosomal protein mitochondrial precursor [Nannochloropsis gaditana]) HSP 1 Score: 268.9 bits (686), Expect = 1.200e-68 Identity = 131/182 (71.98%), Postives = 156/182 (85.71%), Query Frame = 0 Query: 1 MSTMNAALKGMKLLQQRIPHKKKTVEPIKQSRWTILKGDQVEVINGPEKGKQGTVLKVLRAANRLIIEGVNVRRRTQKPTPNGQAGKIITYPAALNVSNVSLLDPESKQPTKVSRRFLEDGTRVRVGRRSGVVLPKPEWKRENIRRAAVGGKDTLPADVYEVTWEEYAAPERKEKKKEGPTF 183 MSTMNAA+KGMK+L++R+PHKKK +EPIK SRWTI KGD+VEVINGPE GKQGT++KVLRA NR+II+GVNVRRRTQ+P+ +GQ GKIITYPAAL+VSNVSLLDPES +PT+V+RR+LE G +VRV S +LPKPE++RE IRRAAV KDTLP DVYEVT+E Y AP R KK +GP F Sbjct: 1 MSTMNAAMKGMKMLEKRLPHKKKMLEPIKPSRWTIFKGDKVEVINGPETGKQGTIIKVLRAQNRVIIDGVNVRRRTQQPSGSGQPGKIITYPAALHVSNVSLLDPESHEPTRVARRYLESGVKVRVSASSQKILPKPEYRREKIRRAAVSPKDTLPEDVYEVTYEGYLAPSRPPKKDQGPRF 182
BLAST of NO26G00320 vs. NCBI_GenBank
Match: XP_005855310.1 (50s ribosomal protein l24 [Nannochloropsis gaditana CCMP526] >EKU21052.1 50s ribosomal protein l24 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 208.0 bits (528), Expect = 2.600e-50 Identity = 102/144 (70.83%), Postives = 121/144 (84.03%), Query Frame = 0 Query: 39 DQVEVINGPEKGKQGTVLKVLRAANRLIIEGVNVRRRTQKPTPNGQAGKIITYPAALNVSNVSLLDPESKQPTKVSRRFLEDGTRVRVGRRSGVVLPKPEWKRENIRRAAVGGKDTLPADVYEVTWEEYAAPERKEKKKEGPTF 183 D+VEVINGPE GKQGT++KVLRA NR+II+GVNVRRRTQ+P+ +GQ GKIITYPAAL+VSNVSLLDPES +PT+V+RR+LE G +VRV S +LPKPE++RE IRRAAV KDTLP DVYEVT+E Y AP R KK +GP F Sbjct: 217 DKVEVINGPETGKQGTIIKVLRAQNRVIIDGVNVRRRTQQPSGSGQPGKIITYPAALHVSNVSLLDPESHEPTRVARRYLESGVKVRVSASSQKILPKPEYRREKIRRAAVSPKDTLPEDVYEVTYEGYLAPSRPPKKDQGPRF 360
BLAST of NO26G00320 vs. NCBI_GenBank
Match: CBJ32696.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 133.7 bits (335), Expect = 6.200e-28 Identity = 75/168 (44.64%), Postives = 109/168 (64.88%), Query Frame = 0 Query: 2 STMNAALKGMKLLQQRIPHKKKTVEP---IKQSRWTILKGDQVEVINGPEKGKQGTVLKVLRAANRLIIEGVNVRRRTQKPTPNGQAGKIITYPAALNVSNVSLLDPESKQPTKVSRRFLEDGTRVRVGRRSGVVLPKPE--WKRENIRRAAVGGKDTLPADVYEVTW 165 ++ N + MK L + K + P I +++WTIL+GD+V V+NG G+ G V V+R NR+I+EGVN+R+ ++KP G+ G +T AA++V+NV+L+ PE+ PTKVS +FLEDGTRVRV +RSG V+P+PE R R G KDT+ DV E+T+ Sbjct: 3 ASSNFLIPAMKRLMKPTQKLKPGLLPKNIIPKNKWTILRGDKVHVVNGHHTGEVGIVQAVIRKQNRIIVEGVNMRKYSKKPEGGGR-GTTVTREAAIHVTNVNLVCPETGFPTKVSYKFLEDGTRVRVAKRSGAVIPRPEILTVRRKPRSNLTGPKDTVKEDVEEITF 169
BLAST of NO26G00320 vs. NCBI_GenBank
Match: XP_008874917.1 (ribosomal protein L24 [Aphanomyces invadans] >ETV96654.1 ribosomal protein L24 [Aphanomyces invadans]) HSP 1 Score: 127.9 bits (320), Expect = 3.400e-26 Identity = 63/154 (40.91%), Postives = 98/154 (63.64%), Query Frame = 0 Query: 16 QRIPHKKKTVEPIKQSRWTILKGDQVEVINGPEKGKQGTVLKVLRAANRLIIEGVNVRRRTQKPTPNGQAGKIITYPAALNVSNVSLLDPESKQPTKVSRRFLEDGTRVRVGRRSGVVLPKPE--WKRENIRRAAVGGKDTLPADVYEVTWEEY 168 +++P ++K + PI W I +GD VEVI+GP +GKQG V +V+RA N +++ +N+R R K P G+I P ++ SNV+L+DP +PT++ RF EDG R+R+ +++G V+PKP+ +R+ RR G DT P DV E T E++ Sbjct: 10 RKMPKREKLIAPI--PTWNIFRGDLVEVISGPHRGKQGEVKEVIRAKNAVVLNDINMRHRYVKAKPGVAPGRIYLAPGPIHYSNVNLVDPSIGKPTRIGIRFAEDGERLRISKKTGTVIPKPDVLKERQAPRRTETGPLDTAPEDVLERTVEDW 161
BLAST of NO26G00320 vs. NCBI_GenBank
Match: GAX99166.1 (ribosomal protein L24 [Pythium insidiosum]) HSP 1 Score: 126.7 bits (317), Expect = 7.600e-26 Identity = 68/149 (45.64%), Postives = 95/149 (63.76%), Query Frame = 0 Query: 21 KKKTVEPIKQSRWTILKGDQVEVINGPEKGKQGTVLKVLRAANRLIIEGVNVRRRTQKPTPNGQAGKIITYPAALNVSNVSLLDPESKQPTKVSRRFLEDGTRVRVGRRSGVVLPKPE--WKRENIRRAAVGGKDTLPADVYEVTWEEY 168 K K +E IK W I +GD VEVINGP KGKQG V +V+R N++I+E +N+ R K TP AG+ P ++ SNV+L+DP +PT+V+ RF +DG +VRV +++G ++PKPE +R RR G DT P DV E T +E+ Sbjct: 16 KAKPIELIK--NWHIYRGDLVEVINGPHKGKQGQVAQVIREKNKVIVENINMHHRYVKRTP-AAAGRSYLAPGPIHYSNVNLVDPSIGKPTRVAIRFTDDGDKVRVSKKTGTIIPKPEILKERHTPRRTETGPFDTAPEDVLESTVQEW 161
BLAST of NO26G00320 vs. NCBI_GenBank
Match: XP_008609207.1 (hypothetical protein SDRG_05274 [Saprolegnia diclina VS20] >EQC37045.1 hypothetical protein SDRG_05274 [Saprolegnia diclina VS20]) HSP 1 Score: 124.0 bits (310), Expect = 4.900e-25 Identity = 64/155 (41.29%), Postives = 96/155 (61.94%), Query Frame = 0 Query: 11 MKLLQQRIPHKKKTVEPIKQSRWTILKGDQVEVINGPEKGKQGTVLKVLRAANRLIIEGVNVRRRTQKPTPNGQAGKIITYPAALNVSNVSLLDPESKQPTKVSRRFLEDGTRVRVGRRSGVVLPKPE--WKRENIRRAAVGGKDTLPADVYEVT 164 M +++P ++K + I +W I +GD+VEV+ GP KGKQG V +V+RA N LI+E +N+R R K P G+I P ++ SNV+L+D +PT+++ RF E+G R+RV +++G ++PKPE +R RR G DT P DV E T Sbjct: 5 MPAAMRKMPKREKLIAEI--PKWNIFRGDKVEVVAGPHKGKQGVVKEVVRAKNSLILEDINMRHRYVKAKPGVAPGRIYLAPGPIHYSNVNLVDETIGKPTRIAIRFSEEGERLRVSKKTGTIIPKPEVLKERHTPRRTETGPLDTAPEDVLERT 157
BLAST of NO26G00320 vs. NCBI_GenBank
Match: ETL35987.1 (ribosomal protein L24 [Phytophthora parasitica]) HSP 1 Score: 122.9 bits (307), Expect = 1.100e-24 Identity = 65/149 (43.62%), Postives = 96/149 (64.43%), Query Frame = 0 Query: 21 KKKTVEPIKQSRWTILKGDQVEVINGPEKGKQGTVLKVLRAANRLIIEGVNVRRRTQKPTPNGQAGKIITYPAALNVSNVSLLDPESKQPTKVSRRFLEDGTRVRVGRRSGVVLPKPE--WKRENIRRAAVGGKDTLPADVYEVTWEEY 168 KKK ++ IK W I +GD+VE+I GP KG QG V+KV+R N++I+E VN+ R K TP AG+ P+ ++ SNV+LLDP +PT+++ RF ++G +VRV +++G ++PKP +R N RR G DT P D E T E++ Sbjct: 16 KKKPIDLIK--TWHIFRGDKVEIIAGPHKGTQGEVVKVVRDLNKVIVENVNMSHRYVKATP-AAAGRSYLSPSPIHYSNVNLLDPSIGKPTRIAIRFTDEGEKVRVSKKTGTIIPKPAILKERHNPRRTETGPFDTAPEDALERTVEDW 161
BLAST of NO26G00320 vs. NCBI_GenBank
Match: XP_014527396.1 (ribosomal protein L24 [Blastocystis sp. subtype 4] >KNB43953.1 ribosomal protein L24 [Blastocystis sp. subtype 4]) HSP 1 Score: 122.5 bits (306), Expect = 1.400e-24 Identity = 78/157 (49.68%), Postives = 104/157 (66.24%), Query Frame = 0 Query: 33 WTILKGD--QVEVINGPEKGKQGTVLKVLRAANRLIIEGVNVRRRTQKPTPNGQAGKIITYPAALNVSNVSLLDPESKQPTKVSRRFLEDGTRVRVGRRSGVVLPKPEWKRENIRRA-----AVGGKDTLPADVYEVTWEEYAAPERKEKKKEGPTF 183 WTI++GD +VEVI+G +KGKQG VLKV R NRL+IEGVN R+R K T + QAG I + + SNV L+DPE+K+PTKV + + DG R RV SG V+PKP+ E+++RA AVG KDTLP+DV EVT+ P+ + + + P F Sbjct: 33 WTIVRGDTVRVEVISGKDKGKQGKVLKVDRKLNRLLIEGVNFRKRYIKGT-DEQAGGIFDVESGVPYSNVQLVDPETKKPTKVKVKRV-DGIRQRVSMASGKVIPKPQ---ESMQRAHPVTSAVGPKDTLPSDVIEVTYN----PDVELRTRHRPLF 180
BLAST of NO26G00320 vs. NCBI_GenBank
Match: XP_008908630.1 (ribosomal protein L24 [Phytophthora parasitica INRA-310] >ETI42580.1 ribosomal protein L24 [Phytophthora parasitica P1569] >ETK82598.1 ribosomal protein L24 [Phytophthora parasitica] >ETL89206.1 ribosomal protein L24 [Phytophthora parasitica] >ETM42465.1 ribosomal protein L24 [Phytophthora parasitica] >ETN06128.1 ribosomal protein L24 [Phytophthora parasitica INRA-310] >ETO71249.1 ribosomal protein L24 [Phytophthora parasitica P1976] >ETP12296.1 ribosomal protein L24 [Phytophthora parasitica CJ01A1] >ETP40424.1 ribosomal protein L24 [Phytophthora parasitica P10297]) HSP 1 Score: 121.7 bits (304), Expect = 2.500e-24 Identity = 64/149 (42.95%), Postives = 96/149 (64.43%), Query Frame = 0 Query: 21 KKKTVEPIKQSRWTILKGDQVEVINGPEKGKQGTVLKVLRAANRLIIEGVNVRRRTQKPTPNGQAGKIITYPAALNVSNVSLLDPESKQPTKVSRRFLEDGTRVRVGRRSGVVLPKPE--WKRENIRRAAVGGKDTLPADVYEVTWEEY 168 KKK ++ IK W I +GD+VE+I GP KG QG V+KV+R N++I+E VN+ R K TP AG+ P+ ++ SNV+L+DP +PT+++ RF ++G +VRV +++G ++PKP +R N RR G DT P D E T E++ Sbjct: 16 KKKPIDLIK--TWHIFRGDKVEIIAGPHKGTQGEVVKVVRDLNKVIVENVNMSHRYVKATP-AAAGRSYLSPSPIHYSNVNLVDPSIGKPTRIAIRFTDEGEKVRVSKKTGTIIPKPAILKERHNPRRTETGPFDTAPEDALERTVEDW 161
BLAST of NO26G00320 vs. NCBI_GenBank
Match: XP_009833128.1 (ribosomal protein L24 [Aphanomyces astaci] >ETV77341.1 ribosomal protein L24 [Aphanomyces astaci]) HSP 1 Score: 121.7 bits (304), Expect = 2.500e-24 Identity = 60/153 (39.22%), Postives = 96/153 (62.75%), Query Frame = 0 Query: 16 QRIPHKKKTVEPIKQSRWTILKGDQVEVINGPEKGKQGTVLKVLRAANRLIIEGVNVRRRTQKPTPNGQAGKIITYPAALNVSNVSLLDPESKQPTKVSRRFLEDGTRVRVGRRSGVVLPKPE--WKRENIRRAAVGGKDTLPADVYEVTWEE 167 +++P ++K + W I +GD VEVI+GP +GKQG V +V+R N +++ +N+R R K P G+I P A++ SNV+L+DP +PT++ RF EDG R+R+ ++SG ++PKP+ +R++ RR G DT P DV E T ++ Sbjct: 10 RKMPKREKFIPSFPS--WNIFRGDLVEVISGPHRGKQGEVKEVIREKNAVVLNDINMRHRYVKAKPGVAPGRIYLAPGAIHYSNVNLIDPSIGKPTRIGIRFGEDGERLRISKKSGTIIPKPDVLKERQSPRRTETGPLDTAPEDVLERTVDD 160 The following BLAST results are available for this feature:
BLAST of NO26G00320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G00320 ID=NO26G00320|Name=NO26G00320|organism=Nannochloropsis oceanica|type=gene|length=1395bpback to top protein sequence of NO26G00320.1 >NO26G00320.1-protein ID=NO26G00320.1-protein|Name=NO26G00320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=191bpback to top Synonyms
Publications
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