NO26G00270, NO26G00270 (gene) Nannochloropsis oceanica

Overview
NameNO26G00270
Unique NameNO26G00270
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1903
Alignment locationchr26:93365..95267 -

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Properties
Property NameValue
DescriptionAutophagy-related protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr26genomechr26:93365..95267 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-rel_dom
IPR004241Atg8-like
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009056catabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
[Close]
BLAST of NO26G00270 vs. NCBI_GenBank
Match: XP_008872753.1 (hypothetical protein H310_08680 [Aphanomyces invadans] >ETV98556.1 hypothetical protein H310_08680 [Aphanomyces invadans])

HSP 1 Score: 203.8 bits (517), Expect = 3.200e-49
Identity = 96/119 (80.67%), Postives = 109/119 (91.60%), Query Frame = 0 
Query:    1 MSSFKAEHPLDKRKAEAEKILSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLSVGQFTYVIRKRIRLPPEKAIFIFVNNYIPPTSAAMSAIYEERKDEDGFLYITYSGENTFGGELL 120
            M+SFK EHP +KR+AEA++I SKYPDRIPVICEKADRSEIPDIDKKKYLVPADL+VGQF YVIRKRI+L PEKAIFIF+NN +PPT++ MS IYEE+KD DGFLYITYSGENTFGG+ L
Sbjct:    1 MNSFKKEHPFEKRQAEAQRIRSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTASLMSNIYEEQKDSDGFLYITYSGENTFGGDNL 119
[Close]
BLAST of NO26G00270 vs. NCBI_GenBank
Match: XP_009832464.1 (hypothetical protein H257_08331 [Aphanomyces astaci] >ETV78127.1 hypothetical protein H257_08331 [Aphanomyces astaci])

HSP 1 Score: 202.6 bits (514), Expect = 7.100e-49
Identity = 97/121 (80.17%), Postives = 108/121 (89.26%), Query Frame = 0 
Query:    1 MSSFKAEHPLDKRKAEAEKILSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLSVGQFTYVIRKRIRLPPEKAIFIFVNNYIPPTSAAMSAIYEERKDEDGFLYITYSGENTFGGELLPV 122
            M+SFK EHP +KR+AEA++I SKYPDRIPVICEKADRSEIPDIDKKKYLVPADL+VGQF YVIRKRI+L PEKAIFIF+NN +PPT+A MS IYEE+KD DGFLYITYSGENTFG   L V
Sbjct:    1 MNSFKKEHPFEKRQAEAQRIRSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDSDGFLYITYSGENTFGSNDLVV 121
[Close]
BLAST of NO26G00270 vs. NCBI_GenBank
Match: GAX99639.1 (autophagy-like protein 8 [Pythium insidiosum])

HSP 1 Score: 202.2 bits (513), Expect = 9.200e-49
Identity = 96/117 (82.05%), Postives = 107/117 (91.45%), Query Frame = 0 
Query:    1 MSSFKAEHPLDKRKAEAEKILSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLSVGQFTYVIRKRIRLPPEKAIFIFVNNYIPPTSAAMSAIYEERKDEDGFLYITYSGENTFGGE 118
            MSSFK EHP +KR+AEA++I SKYPDRIPVICEKADRS+IPDIDKKKYLVPADL+VGQF YVIRKRI+L PEKAIFIF+NN +PPT+A MS IYEE+KD DGFLYITYSGENTFG E
Sbjct:    1 MSSFKKEHPFEKRQAEAQRIRSKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDSDGFLYITYSGENTFGHE 117
[Close]
BLAST of NO26G00270 vs. NCBI_GenBank
Match: XP_008606450.1 (autophagy-like protein 8 [Saprolegnia diclina VS20] >EQC39976.1 autophagy-like protein 8 [Saprolegnia diclina VS20])

HSP 1 Score: 200.3 bits (508), Expect = 3.500e-48
Identity = 94/117 (80.34%), Postives = 107/117 (91.45%), Query Frame = 0 
Query:    1 MSSFKAEHPLDKRKAEAEKILSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLSVGQFTYVIRKRIRLPPEKAIFIFVNNYIPPTSAAMSAIYEERKDEDGFLYITYSGENTFGGE 118
            M+SFK EHP +KR+AEA++I SKYPDRIPVICEKADRS+IPDIDKKKYLVPADL+VGQF YVIRKRI+L PEKAIFIF+NN +PPT+A MS IYEE+KD DGFLYITYSGENTFG +
Sbjct:    1 MNSFKKEHPFEKRQAEAQRIRSKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDTDGFLYITYSGENTFGAD 117
[Close]
BLAST of NO26G00270 vs. NCBI_GenBank
Match: XP_012208972.1 (autophagy-like protein 8 [Saprolegnia parasitica CBS 223.65] >KDO20302.1 autophagy-like protein 8 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 200.3 bits (508), Expect = 3.500e-48
Identity = 94/117 (80.34%), Postives = 107/117 (91.45%), Query Frame = 0 
Query:    1 MSSFKAEHPLDKRKAEAEKILSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLSVGQFTYVIRKRIRLPPEKAIFIFVNNYIPPTSAAMSAIYEERKDEDGFLYITYSGENTFGGE 118
            M+SFK EHP +KR+AEA++I SKYPDRIPVICEKADRS+IPDIDKKKYLVPADL+VGQF YVIRKRI+L PEKAIFIF+NN +PPT+A MS IYEE+KD DGFLYITYSGENTFG +
Sbjct:    1 MNSFKKEHPFEKRQAEAQRIRSKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDTDGFLYITYSGENTFGAD 117
[Close]
BLAST of NO26G00270 vs. NCBI_GenBank
Match: XP_002906463.1 (autophagy-related protein, putative [Phytophthora infestans T30-4] >XP_008909643.1 hypothetical protein PPTG_14822 [Phytophthora parasitica INRA-310] >XP_008909644.1 hypothetical protein, variant [Phytophthora parasitica INRA-310] >XP_009515510.1 hypothetical protein PHYSODRAFT_353495 [Phytophthora sojae] >Q8H715.1 RecName: Full=Autophagy-related protein 8; AltName: Full=Autophagy-related ubiquitin-like modifier ATG8; Flags: Precursor >AAN31480.1 microtubial binding protein [Phytophthora infestans] >EEY65864.1 autophagy-related protein, putative [Phytophthora infestans T30-4] >EGZ28235.1 hypothetical protein PHYSODRAFT_353495 [Phytophthora sojae] >ETI40514.1 hypothetical protein F443_14127 [Phytophthora parasitica P1569] >ETI40515.1 hypothetical protein, variant [Phytophthora parasitica P1569] >ETK80615.1 hypothetical protein L915_13769 [Phytophthora parasitica] >ETK80616.1 hypothetical protein, variant [Phytophthora parasitica] >ETL34038.1 hypothetical protein L916_13666 [Phytophthora parasitica] >ETL34039.1 hypothetical protein, variant [Phytophthora parasitica] >ETL87314.1 hypothetical protein L917_13474 [Phytophthora parasitica] >ETL87315.1 hypothetical protein, variant [Phytophthora parasitica] >ETM40540.1 hypothetical protein L914_13559 [Phytophthora parasitica] >ETM40541.1 hypothetical protein, variant [Phytophthora parasitica] >ETN05173.1 hypothetical protein PPTG_14822 [Phytophthora parasitica INRA-310] >ETN05174.1 hypothetical protein, variant [Phytophthora parasitica INRA-310] >ETO69247.1 hypothetical protein F444_14157 [Phytophthora parasitica P1976] >ETO69248.1 hypothetical protein, variant [Phytophthora parasitica P1976] >ETP10290.1 hypothetical protein F441_14055 [Phytophthora parasitica CJ01A1] >ETP10291.1 hypothetical protein, variant [Phytophthora parasitica CJ01A1] >ETP38432.1 hypothetical protein F442_13973 [Phytophthora parasitica P10297] >ETP38433.1 hypothetical protein, variant [Phytophthora parasitica P10297] >KUF84121.1 Autophagy-related protein 8 [Phytophthora nicotianae] >OWZ24681.1 Autophagy-related protein [Phytophthora megakarya] >POM73725.1 Autophagy-related protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 200.3 bits (508), Expect = 3.500e-48
Identity = 95/115 (82.61%), Postives = 106/115 (92.17%), Query Frame = 0 
Query:    1 MSSFKAEHPLDKRKAEAEKILSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLSVGQFTYVIRKRIRLPPEKAIFIFVNNYIPPTSAAMSAIYEERKDEDGFLYITYSGENTFG 116
            MSSFK EHP +KR+AEA++I SKYPDRIPVICEKADRS+IPDIDKKKYLVPADL+VGQF YVIRKRI+L PEKAIFIF+NN +PPT+A MS IYEE+KD DGFLYITYSGENTFG
Sbjct:    1 MSSFKKEHPFEKRQAEAQRIRSKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTFG 115
[Close]
BLAST of NO26G00270 vs. NCBI_GenBank
Match: XP_024572655.1 (autophagy-related protein 8 precursor [Plasmopara halstedii] >CEG36286.1 autophagy-related protein 8 precursor [Plasmopara halstedii])

HSP 1 Score: 200.3 bits (508), Expect = 3.500e-48
Identity = 95/115 (82.61%), Postives = 106/115 (92.17%), Query Frame = 0 
Query:    1 MSSFKAEHPLDKRKAEAEKILSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLSVGQFTYVIRKRIRLPPEKAIFIFVNNYIPPTSAAMSAIYEERKDEDGFLYITYSGENTFG 116
            MSSFK EHP +KR+AEA++I SKYPDRIPVICEKADRS+IPDIDKKKYLVPADL+VGQF YVIRKRI+L PEKAIFIF+NN +PPT+A MS IYEE+KD DGFLYITYSGENTFG
Sbjct:   28 MSSFKKEHPFEKRQAEAQRIRSKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTFG 142
[Close]
BLAST of NO26G00270 vs. NCBI_GenBank
Match: OQS02504.1 (autophagy-related protein [Thraustotheca clavata])

HSP 1 Score: 199.9 bits (507), Expect = 4.600e-48
Identity = 94/118 (79.66%), Postives = 107/118 (90.68%), Query Frame = 0 
Query:    1 MSSFKAEHPLDKRKAEAEKILSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLSVGQFTYVIRKRIRLPPEKAIFIFVNNYIPPTSAAMSAIYEERKDEDGFLYITYSGENTFGGEL 119
            M+SFK EHP +KR+AEA++I SKYPDRIPVICEKADRS+IPDIDKKKYLVPADL+VGQF YVIRKRI+L PEKAIFIF+NN +PPT+A MS IYEE+KD DGFLYITYSGENTFG  +
Sbjct:    1 MNSFKKEHPFEKRQAEAQRIRSKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDTDGFLYITYSGENTFGNAM 118
[Close]
BLAST of NO26G00270 vs. NCBI_GenBank
Match: CEL55466.1 (Autophagy-related protein 8 OS=Laccaria bicolor GN=ATG8 PE=2 SV=2 [Rhizoctonia solani AG-1 IB])

HSP 1 Score: 198.4 bits (503), Expect = 1.300e-47
Identity = 94/117 (80.34%), Postives = 104/117 (88.89%), Query Frame = 0 
Query:    2 SSFKAEHPLDKRKAEAEKILSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLSVGQFTYVIRKRIRLPPEKAIFIFVNNYIPPTSAAMSAIYEERKDEDGFLYITYSGENTFGGEL 119
            S FK EHP DKRKAEAE+I  KYPDRIPVICEKADR++IP IDKKKYLVP+DL+VGQF YVIRKRI+L PEKAIFIFVN  +PPT+A MSAIYEE KDEDGFLY++YSGENTFG EL
Sbjct:    3 SKFKDEHPFDKRKAEAERIRQKYPDRIPVICEKADRTDIPTIDKKKYLVPSDLTVGQFVYVIRKRIKLAPEKAIFIFVNEILPPTAALMSAIYEEHKDEDGFLYVSYSGENTFGSEL 119
[Close]
BLAST of NO26G00270 vs. NCBI_GenBank
Match: CCA25483.1 (autophagyrelated protein putative [Albugo laibachii Nc14])

HSP 1 Score: 197.2 bits (500), Expect = 3.000e-47
Identity = 93/115 (80.87%), Postives = 105/115 (91.30%), Query Frame = 0 
Query:    1 MSSFKAEHPLDKRKAEAEKILSKYPDRIPVICEKADRSEIPDIDKKKYLVPADLSVGQFTYVIRKRIRLPPEKAIFIFVNNYIPPTSAAMSAIYEERKDEDGFLYITYSGENTFG 116
            MSSF  EHP +KR+AEA++I  KYPDRIPVICEKADRS+IPDIDKKKYLVPADL+VGQF YVIRKRI+L PEKAIFIF+NN +PPT+A MS+IYEE+KD DGFLYITYSGENTFG
Sbjct:    1 MSSFMKEHPYEKRQAEAQRIRCKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSSIYEEQKDADGFLYITYSGENTFG 115
The following BLAST results are available for this feature:
BLAST of NO26G00270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_008872753.13.200e-4980.67hypothetical protein H310_08680 [Aphanomyces invad... [more]
XP_009832464.17.100e-4980.17hypothetical protein H257_08331 [Aphanomyces astac... [more]
GAX99639.19.200e-4982.05autophagy-like protein 8 [Pythium insidiosum][more]
XP_008606450.13.500e-4880.34autophagy-like protein 8 [Saprolegnia diclina VS20... [more]
XP_012208972.13.500e-4880.34autophagy-like protein 8 [Saprolegnia parasitica C... [more]
XP_002906463.13.500e-4882.61autophagy-related protein, putative [Phytophthora ... [more]
XP_024572655.13.500e-4882.61autophagy-related protein 8 precursor [Plasmopara ... [more]
OQS02504.14.600e-4879.66autophagy-related protein [Thraustotheca clavata][more]
CEL55466.11.300e-4780.34Autophagy-related protein 8 OS=Laccaria bicolor GN... [more]
CCA25483.13.000e-4780.87autophagyrelated protein putative [Albugo laibachi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoR045ngnoR045Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO26G00270.1NO26G00270.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO26G00270.1NO26G00270.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO26G00270 ID=NO26G00270|Name=NO26G00270|organism=Nannochloropsis oceanica|type=gene|length=1903bp
ACCTTGGAGGCATTTCTTGCCTGTGTTTTTCCAGTGCATTAGACGGACAA
GAAGGGGGGAGGGAGAAGACGGAAGTGTTAATAAACTGATTTAATGGATG
GGTGAATTGTGGGAGAGAGGGAGAGAGAGACTGGCTGTACATAGAGGGGA
CGATGGCGTCGACGGCATGCAAAGGCCTGCTTATTGCTTGCTCACTTGCT
TCAATTTTCCACGCAGAGGCCCTCATCGTGCTTTTGGTTCACTTTGGGCG
TCCTCCCTCACTGTCAGGTTGACCCGACCACGCACACAACAAACACACGC
CCCTGCCCGGCGGTGGGAGACCAACAGCTCCTTCTCTTGCTTGATGTACA
TAGAGGTGCGTAAGCGCGGATGCACCTGAGGTGGAAACAGAGGCACAAAA
CAGCTTGTCAAGCGGAATCATAAGAACACAGCGCAAAAAGGATGATGCCT
TTCTTTTCATTCGTGCCCTGCAAGTGCTATCATATCAGCCGCCATGTCCC
TTCTTTCCCTCCTAGCAAGCAGACGCACGGCTACTTCTTTGTGTTTGTGC
CCAGTTGCGGGTCGCCTGGAAGAATACGAAGGGGAGGAGGAGTGCCAGGC
AGCCGCGGGTGATAGGGCCATAAGGCAGAAGAAAGATGCCGTGCATTGCG
TATGAATGCGACACAAATCAGCAAGCACGCCCACTCTTACACACATATAC
ACACTAAGACGCACCTCTCTCCCACACATATATGTACACACGCATGCACA
CAGTCGTCGTTTTCCTCTAGCGCGGCTTTTGTTGTCCTCGTAGTCGGCAG
AAACAGAAGCTGAAGGGGATCGATAACTGCAGCCATAGCATCAGCAGCAA
CAAAAAGGAGCAGTAATAGCCCACGGCACACCCAACCCGACCGTCTATCG
TTGCCTCGTCGTTAAGCTTACGACCAGGCAGACGACCGTAGACAATCAGG
AACAATACCGACCCCCAACAAGATGAGCTCCTTCAAGGCCGAGCACCCGC
TGGgtaaggagggagggagggaggggccggcgttgttttgtgtgcataaa
aacatgcgctcggatgtcgacggtagtgagaatagtgtagcgggattgcc
gggatgcttgcgaggaggatttcgaaaatgactcccgaaaacgttcgaaa
accatattttttcttatgttttcttcccgccctccctccctttcatccct
ccccctctccttacagATAAGCGGAAGGCGGAGGCGGAGAAAATCCTTTC
CAAGTACCCAGATCGCATCCCCGTCATTTGCGAGAAGGCGGACAGGAGTG
AGATCCCCGATATTGACAAGAAGAAgtaagtagaacagtcctccttcccc
ccccccctccctccctccctccctccctccctccctcctgccgatcctct
ctccaactaacgcccctcccttgctccctctctcactccctccctttatc
tgaaagGTACCTGGTGCCGGCCGACCTCTCCGTCGGTCAGTTCACCTACG
TCATTCGCAAGCGGATCCGTCTCCCGCCTGAGAAGGCCATCTTTATCTTC
GTCAATAATTACATCCCTCCTACCTgtaagcaagccctccctcccttcct
ccctccacctctttcccttctccttcctccctccctttcttttcttcctt
cttccctcactccgcgattcttgcgtattaacgttccttccttcccttat
taacgttccttccttccctccctccctccctccctccctcccttcctccc
ttcctcccttcctccctccagCGGCGGCCATGTCAGCCATCTACGAAGAG
AGGAAAGATGAGGACGGCTTTCTTTATATCACCTATTCAGGCGAGAACAC
GTTTGGGGGTGAGCTGTTGCCTGTGGAGTAGGGAGGGAGGGAGGGAGGGA
GGG
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protein sequence of NO26G00270.1

>NO26G00270.1-protein ID=NO26G00270.1-protein|Name=NO26G00270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=123bp
MSSFKAEHPLDKRKAEAEKILSKYPDRIPVICEKADRSEIPDIDKKKYLV
PADLSVGQFTYVIRKRIRLPPEKAIFIFVNNYIPPTSAAMSAIYEERKDE
DGFLYITYSGENTFGGELLPVE*
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Synonyms
Publications