NO26G00220, NO26G00220 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO26G00220 vs. NCBI_GenBank
Match: EWM23061.1 (Nucleic acid-binding, OB-fold-like protein [Nannochloropsis gaditana]) HSP 1 Score: 137.9 bits (346), Expect = 2.400e-29 Identity = 67/110 (60.91%), Postives = 81/110 (73.64%), Query Frame = 0 Query: 3 ERARVDGSITKIAEVTVGDETGTITLRARNGQVDFLVQGLRETEEDETKPLVVVVRNAGVAMYKGHMRLIVNKWGKLSRYPDGISSTPSAPFEVNEETDKSGVEYELIHR 113 E+ARVDGS TKIAE+ VGDETG ITLRARN QV+F ++ V+V+RNAGV+MYKGHMRLIVNKWGK+S YPD ++STP P +V DKS VEYEL+ + Sbjct: 62 EKARVDGSTTKIAEIVVGDETGVITLRARNSQVEFFLKXXXXXXXXXXXXXVIVLRNAGVSMYKGHMRLIVNKWGKISSYPDEVASTPPPPADVLGTNDKSSVEYELVEQ 171
BLAST of NO26G00220 vs. NCBI_GenBank
Match: XP_008876518.1 (hypothetical protein H310_11573 [Aphanomyces invadans] >ETV94927.1 hypothetical protein H310_11573 [Aphanomyces invadans]) HSP 1 Score: 105.5 bits (262), Expect = 1.300e-19 Identity = 52/108 (48.15%), Postives = 70/108 (64.81%), Query Frame = 0 Query: 3 ERARVDGSITKIAEVTVGDETGTITLRARNGQVDFLVQGLRETEEDETKPLVVVVRNAGVAMYKGHMRLIVNKWGKLSRYPDGISSTPSAPFEVNEETDKSGVEYELI 111 E+ R+DGSI +I E TVGDETGT+ L ARN Q+ + G V+V+RNA +Y G +RL V +WGK++ +PDGI+STP AP VN + SG+EYEL+ Sbjct: 42 EKTRIDGSIVRIVEATVGDETGTVVLNARNEQIKLVEVG-----------RVLVIRNASADVYNGFLRLNVTQWGKIAPHPDGIASTPHAPQSVNTSNNVSGIEYELV 138
BLAST of NO26G00220 vs. NCBI_GenBank
Match: XP_002900136.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY60340.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 105.1 bits (261), Expect = 1.800e-19 Identity = 53/109 (48.62%), Postives = 74/109 (67.89%), Query Frame = 0 Query: 2 LERARVDGSITKIAEVTVGDETGTITLRARNGQVDFLVQGLRETEEDETKPLVVVVRNAGVAMYKGHMRLIVNKWGKLSRYPDGISSTPSAPFEVNEETDKSGVEYELI 111 +E+ R DG+I++IAE + DETG +TL ARN Q+D L +GL VVVRN+ ++ G MRL V +WGKLS +PDG++STP AP +VN +++ S VEYEL+ Sbjct: 42 VEKKRYDGTISRIAEAVLADETGCVTLTARNDQIDMLKEGLD-----------VVVRNSNADIFNGFMRLNVTQWGKLSPHPDGVASTPPAPPKVNTDSNISAVEYELV 139
BLAST of NO26G00220 vs. NCBI_GenBank
Match: XP_009830915.1 (hypothetical protein H257_07175 [Aphanomyces astaci] >ETV79979.1 hypothetical protein H257_07175 [Aphanomyces astaci]) HSP 1 Score: 104.8 bits (260), Expect = 2.300e-19 Identity = 52/108 (48.15%), Postives = 70/108 (64.81%), Query Frame = 0 Query: 3 ERARVDGSITKIAEVTVGDETGTITLRARNGQVDFLVQGLRETEEDETKPLVVVVRNAGVAMYKGHMRLIVNKWGKLSRYPDGISSTPSAPFEVNEETDKSGVEYELI 111 E+ R DGS+ +I E TVGDETGT+ L ARNGQ+ L G V+V+RNA +Y G +RL V +WGK++ +PDGI+STP+AP +N + S VEYEL+ Sbjct: 42 EKPRYDGSVVRIVEATVGDETGTVVLSARNGQIQLLDVG-----------RVLVIRNANADVYNGFLRLNVTQWGKIAPHPDGIASTPNAPSSINTVNNISSVEYELV 138
BLAST of NO26G00220 vs. NCBI_GenBank
Match: XP_024582713.1 (RFA1, RPA1, rpa [Plasmopara halstedii] >CEG46344.1 RFA1, RPA1, rpa [Plasmopara halstedii]) HSP 1 Score: 103.6 bits (257), Expect = 5.100e-19 Identity = 52/109 (47.71%), Postives = 70/109 (64.22%), Query Frame = 0 Query: 2 LERARVDGSITKIAEVTVGDETGTITLRARNGQVDFLVQGLRETEEDETKPLVVVVRNAGVAMYKGHMRLIVNKWGKLSRYPDGISSTPSAPFEVNEETDKSGVEYELI 111 +E+ R DGS+++IAEV + DETG +T ARN Q+D L +G LVVV+RN+ +Y G MRL V WGKLS +PDGI STP P +N + + S +EYEL+ Sbjct: 42 VEKKRYDGSVSRIAEVVLADETGCVTFTARNDQIDMLKEG-----------LVVVLRNSNADIYNGFMRLNVTLWGKLSLHPDGIESTPPPPPSINTDNNISAIEYELV 139
BLAST of NO26G00220 vs. NCBI_GenBank
Match: GAX99860.1 (Hypothetical protein PINS_007728 [Pythium insidiosum]) HSP 1 Score: 102.4 bits (254), Expect = 1.100e-18 Identity = 51/108 (47.22%), Postives = 72/108 (66.67%), Query Frame = 0 Query: 3 ERARVDGSITKIAEVTVGDETGTITLRARNGQVDFLVQGLRETEEDETKPLVVVVRNAGVAMYKGHMRLIVNKWGKLSRYPDGISSTPSAPFEVNEETDKSGVEYELI 111 E+ R DG+ T++AEV +GDETG +T ARN Q++ L D T VV+RN+ ++ G +RL VN+WGK+SR+PDG++STP AP V ++ D S VEYEL+ Sbjct: 712 EKKRFDGTSTRLAEVVLGDETGVVTFTARNDQIEAL-------PVDTT----VVIRNSSADIFNGFIRLNVNQWGKISRHPDGVASTPEAPSSVKQDNDISSVEYELV 808
BLAST of NO26G00220 vs. NCBI_GenBank
Match: CCA17796.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 102.1 bits (253), Expect = 1.500e-18 Identity = 49/110 (44.55%), Postives = 70/110 (63.64%), Query Frame = 0 Query: 1 MLERARVDGSITKIAEVTVGDETGTITLRARNGQVDFLVQGLRETEEDETKPLVVVVRNAGVAMYKGHMRLIVNKWGKLSRYPDGISSTPSAPFEVNEETDKSGVEYELI 111 ++ + R DG+ ++AE VGDETG +TL ARN Q+D L +G VV+RN +Y G++RL V +WGK++ YPDG+ STP+ P E+N E D S +EYEL+ Sbjct: 40 LVAKKRQDGNAPRMAEAVVGDETGIVTLTARNEQIDSLKEGGD-----------VVIRNCNADVYNGYLRLNVTRWGKITPYPDGVDSTPNPPTEINMENDFSAIEYELV 138
BLAST of NO26G00220 vs. NCBI_GenBank
Match: XP_008899500.1 (hypothetical protein PPTG_07086 [Phytophthora parasitica INRA-310] >ETI55026.1 hypothetical protein F443_02260 [Phytophthora parasitica P1569] >ETK94853.1 hypothetical protein L915_02168 [Phytophthora parasitica] >ETL48246.1 hypothetical protein L916_02131 [Phytophthora parasitica] >ETM01347.1 hypothetical protein L917_02059 [Phytophthora parasitica] >ETM54534.1 hypothetical protein L914_02152 [Phytophthora parasitica] >ETN14829.1 hypothetical protein PPTG_07086 [Phytophthora parasitica INRA-310] >ETO83765.1 hypothetical protein F444_02265 [Phytophthora parasitica P1976] >ETP24828.1 hypothetical protein F441_02235 [Phytophthora parasitica CJ01A1] >ETP52829.1 hypothetical protein F442_02215 [Phytophthora parasitica P10297] >KUF65048.1 hypothetical protein AM587_10008382 [Phytophthora nicotianae]) HSP 1 Score: 100.5 bits (249), Expect = 4.300e-18 Identity = 50/109 (45.87%), Postives = 70/109 (64.22%), Query Frame = 0 Query: 2 LERARVDGSITKIAEVTVGDETGTITLRARNGQVDFLVQGLRETEEDETKPLVVVVRNAGVAMYKGHMRLIVNKWGKLSRYPDGISSTPSAPFEVNEETDKSGVEYELI 111 +E+ R DG+I++IAE + DETG +T ARN Q+D L +G LVVVVRN+ ++ G MRL V +WGKLS +PDG++STP +N + + S VEYEL+ Sbjct: 42 VEKKRYDGTISRIAEAVLADETGCVTFTARNDQIDMLKEG-----------LVVVVRNSNADIFNGFMRLNVTQWGKLSPHPDGVASTPXXXXSINTDNNISAVEYELV 139
BLAST of NO26G00220 vs. NCBI_GenBank
Match: CCI42363.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 99.4 bits (246), Expect = 9.600e-18 Identity = 47/107 (43.93%), Postives = 67/107 (62.62%), Query Frame = 0 Query: 4 RARVDGSITKIAEVTVGDETGTITLRARNGQVDFLVQGLRETEEDETKPLVVVVRNAGVAMYKGHMRLIVNKWGKLSRYPDGISSTPSAPFEVNEETDKSGVEYELI 111 + R DG+ ++AE VGDETG +TL ARN Q+D L +G +V+RN +Y G++RL V +WGK++ YPDG++STP P E+ E D S +EYEL+ Sbjct: 563 KKRQDGNAPRMAEAVVGDETGIVTLTARNEQIDSLKEGSD-----------IVIRNCNADVYNGYLRLNVTRWGKITPYPDGVASTPKPPTEIKMENDFSAIEYELV 658
BLAST of NO26G00220 vs. NCBI_GenBank
Match: POM60471.1 (hypothetical protein PHPALM_30668 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 99.4 bits (246), Expect = 9.600e-18 Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = 0 Query: 2 LERARVDGSITKIAEVTVGDETGTITLRARNGQVDFLVQGLRETEEDETKPLVVVVRNAGVAMYKGHMRLIVNKWGKLSRYPDGISSTPSAPFEVNEETDKSGVEYELI 111 +E+ R DG+I++IAE + DETG +T ARN Q+D L +G LVVVVRN+ ++ G MRL V +WGKLS +PDG++STP VN + + S VEYE + Sbjct: 42 VEKKRYDGTISRIAEAVLADETGCVTFTARNDQIDMLTEG-----------LVVVVRNSNADIFNGFMRLNVTQWGKLSLHPDGVASTPXXXXSVNTDNNISAVEYEQV 139 The following BLAST results are available for this feature:
BLAST of NO26G00220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO26G00220 ID=NO26G00220|Name=NO26G00220|organism=Nannochloropsis oceanica|type=gene|length=1169bpback to top protein sequence of NO26G00220.1 >NO26G00220.1-protein ID=NO26G00220.1-protein|Name=NO26G00220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=141bpback to top Synonyms
Publications
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